RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCEL (Homo sapiens)

Ensembl gene IDs: ENSG00000136155

Ensembl transcript IDs: ENST00000349847.4, ENST00000377246.7, ENST00000469982.1, ENST00000471491.5, ENST00000535157.5

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACCACCACTCACAGCCAACATACGGAGCAGGGATGGACCTGGCTaGAGTGTAATGCATCACTCCTTTGACACTGGAATCTGGAACCAT +
Preference number: 1 (lower is better)
Translates to: KPPLTANIRSRDGPG*SVMHHSFDTGIWNH
Trigger: ATGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATTACACTCCAGCCAGGTCCATCCCTGCTCCGTATGTTGGCTGTGAGTGGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR TCA 90 bp ACGGAGCAGGGATGGACCTGGCTGGAGTGTAATGCATCACTCCTTTaGCACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCT +
Preference number: 1 (lower is better)
Translates to: TEQGWTWLECNASLL*HWNLEPFELFIANS
Trigger: AGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATTACACTCCAGCCAGGTCCATCCCTGCTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR CCA 90 bp GGACCTGGCTGGAGTGTAATGCATCACTCCTTTGACACTGGAATCTaGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAG +
Preference number: 1 (lower is better)
Translates to: GPGWSVMHHSFDTGI*NHLNFLLLTLARDQ
Trigger: CTGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATTACACTCCAGCCAGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR GCA 90 bp ACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTaGCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGC +
Preference number: 1 (lower is better)
Translates to: TQIRGPMKQHSTYSF*LLGLMGQSSTRVHC
Trigger: GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR GCA 90 bp TTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTaGCACAAAGGAAAGCATAACACTCCCATTCCTAATGAGGTAAAA +
Preference number: 1 (lower is better)
Translates to: FCLLGLMGQSSTRVH*HKGKHNTPIPNEVK
Trigger: TTTTACCTCATTAGGAATGGGAGTGTTATGCTTTCCTTTGTGGCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR GCA 90 bp GTTCTGTTTCTTTCAGGAGTCACTTTAATGAGGCTGTCGAGACTTTGGCCCCCTAGTACAAGAGTTCACTaGCACAAAGGAAAGCATAAC +
Preference number: 2 (lower is better)
Translates to: VLFLSGVTLMRLSRLWPPSTRVH*HKGKHN
Trigger: GTTATGCTTTCCTTTGTGGCAGTGAACTCTTGTACT...AGGGGGCCAAAGTCTCGACAGCCTCATTAAAGTGACTCCTGAAAGAAACAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR CCA 90 bp GTTCTGTTTCTTTCAGGAGTCACTTTAATGAGGCTGTCGAGACTTTGGCCCCCTAGATTATCAAGGCTCTaGCCCCTCGTAATATTTTTA +
Preference number: 2 (lower is better)
Translates to: VLFLSGVTLMRLSRLWPPRLSRL*PLVIFL
Trigger: TAAAAATATTACGAGGGGCCAGAGCCTTGATAATCT...AGGGGGCCAAAGTCTCGACAGCCTCATTAAAGTGACTCCTGAAAGAAACAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR CAA 90 bp TGGAGTGTAATGCATCACTCCTTTGACACTGGAATCTGGAACCATTaGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGATGGCTCTT +
Preference number: 2 (lower is better)
Translates to: WSVMHHSFDTGIWNH*NFLLLTLARDQMAL
Trigger: AAGAGCCATCTGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATTACACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR CAA 90 bp AACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTaGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: NSNQRSYETALNIFL*PTRSDGSKQYKSSL
Trigger: CAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR CAA 90 bp CATCACTCCTTTGACACTGGAATCTGGAACCATTTGAACTTTTTATaGCTAACTCTAGCCAGAGACCAGATGGCTCTTTTTATGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HHSFDTGIWNHLNFL*LTLARDQMALFMCV
Trigger: CACACACATAAAAAGAGCCATCTGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAAGGAGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR-3UTR TCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGAGTTTTCAGGACCAAATaGCCAAAAAGAGCTTTGATG +
Preference number: 2 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRVFRTK*PKRALM
Trigger: CATCAAAGCTCTTTTTGGTCATTTGGTCCTGAAAAC...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR TCA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCGTAGATTCTTTGAAGTaGAGATCAGGGCACCAGGGA +
Preference number: 2 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFVDSLK*RSGHQG
Trigger: TCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTAC...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR GCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATTGTAGCAGGTTTTCCTaGACCTACTTCAATGTAACT +
Preference number: 2 (lower is better)
Translates to: SLERLLNVALAVQFCPLYCSRFS*TYFNVT
Trigger: AGTTACATTGAAGTAGGTGCAGGAAAACCTGCTACA...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR GCA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCTCAGTTCTCACCTTCTaGTCGTTTTATTCATCCTGG +
Preference number: 2 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFSVLTF*SFYSSW
Trigger: CCAGGATGAATAAAACGAGCAGAAGGTGAGAACTGA...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR TCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCAAATCAGAGGTCCTATaGAACAGCACTCAACATATT +
Preference number: 2 (lower is better)
Translates to: HFDEIIKALAPRNIFICFKSEVL*NSTQHI
Trigger: AATATGTTGAGTGCTGTTTCATAGGACCTCTGATTT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR GCA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCTCAACATATTCCTTTTaGCTACTAGGTCTGATGGGT +
Preference number: 2 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFSTYSF*LLGLMG
Trigger: ACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGA...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR CCA 72 bp CTCACAGCCAACATACGGAGCAGGGATGGACCTGGCTaGAGTGTAATGCATCACTCCTTTGACACTGGAATC +
Preference number: 3 (lower is better)
Translates to: LTANIRSRDGPG*SVMHHSFDTGI
Trigger: GATTCCAGTGTCAAAGGAGTGATGCATTACACTCCAGCCAGGTCCATCCCTGCTCCGTATGTTGGCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR GCA 72 bp CTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTaGCACAAAGGAAAGCATAACACTCCCATTCCTAAT +
Preference number: 3 (lower is better)
Translates to: LGLMGQSSTRVH*HKGKHNTPIPN
Trigger: ATTAGGAATGGGAGTGTTATGCTTTCCTTTGTGGCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR TCA 72 bp GGATGGACCTGGCTGGAGTGTAATGCATCACTCCTTTaGCACTGGAATCTGGAACCATTTGAACTTTTTATT +
Preference number: 3 (lower is better)
Translates to: GWTWLECNASLL*HWNLEPFELFI
Trigger: AATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATTACACTCCAGCCAGGTCCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR GCA 72 bp AGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTaGCTACTAGGTCTGATGGGTCAAAGCAGTACAAGA +
Preference number: 3 (lower is better)
Translates to: RGPMKQHSTYSF*LLGLMGQSSTR
Trigger: TCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR-3UTR CAA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATCTCAACATATTCCTTTaGCCTACTAGGTCTGATGGG +
Preference number: 3 (lower is better)
Translates to: SLERLLNVALAVQFCPLYLNIFL*PTRSDG
Trigger: CCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAG...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACACCTGGAGGGGGCGGTaGAAACCAGGACTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDTWRGR*KPGLPL
Trigger: AAGAGGCAGTCCTGGTTTCCACCGCCCCCTCCAGGT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAACCTGGAGGGGGCGGTaGAAACCAGGACTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPTWRGR*KPGLPL
Trigger: AAGAGGCAGTCCTGGTTTCCACCGCCCCCTCCAGGT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCTGGTTCCCGTCTCCTaGTTCCTGTGCTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLVPVS*FLCSRR
Trigger: CCTCCTCGAGCACAGGAACCAGGAGACGGGAACCAG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGACTGGTTCCCGTCTCCTaGTTCCTGTGCTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRLVPVS*FLCSRR
Trigger: CCTCCTCGAGCACAGGAACCAGGAGACGGGAACCAG...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGAGGTATTGGAGGGTaGACACCTGGTTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGGIGG*TPGSRL
Trigger: GAGACGGGAACCAGGTGTTCACCCTCCAATACCTCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTGCTGCTTCCGTGTaGTTCCCTGAGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPAASV*FPEWCS
Trigger: AGAGCACCACTCAGGGAACCACACGGAAGCAGCAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCTGCTGCTTCCGTGTaGTTCCCTGAGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPAASV*FPEWCS
Trigger: AGAGCACCACTCAGGGAACCACACGGAAGCAGCAGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGACCTGCTGCTTCCGTGTaGTTCCCTGAGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRPAASV*FPEWCS
Trigger: AGAGCACCACTCAGGGAACCACACGGAAGCAGCAGG...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGAGGCATTGTAACCTaGAGGGGGCGGTGGAAACCA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGGIVT*RGRWKP
Trigger: TGGTTTCCACCGCCCCCTCCAGGTTACAATGCCTCC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGAGGGTGAACACCTaGTTCCCGTCTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWRVNT*FPSPGS
Trigger: GGAACCAGGAGACGGGAACCAGGTGTTCACCCTCCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCGGGCTTTGGAGGTATTaGAGGGTGAACACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCGLWRY*RVNTWF
Trigger: GAACCAGGTGTTCACCCTCCAATACCTCCAAAGCCC...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTCCTGTGGTCCTGCCTaGTTGGCTCCAGTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSCGPA*LAPVLE
Trigger: CTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATCCTGTGGTCCTGCCTaGTTGGCTCCAGTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPSCGPA*LAPVLE
Trigger: CTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCACCTGGAGGGGGCGGTaGAAACCAGGACTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFTWRGR*KPGLPL
Trigger: AAGAGGCAGTCCTGGTTTCCACCGCCCCCTCCAGGT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACACAACAGTATCCTGTaGTCCTGCCTGCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPHNSIL*SCLLGS
Trigger: GGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACAACAGTATCCTGTaGTCCTGCCTGCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDHNSIL*SCLLGS
Trigger: GGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATTCCGTGTGGTTCCCTaGGTGGTGCTCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPFRVVP*VVLFIS
Trigger: TGAGATGAAGAGCACCACTCAGGGAACCACACGGAA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCGGAGGTATTGGAGGGTaGACACCTGGTTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFGGIGG*TPGSRL
Trigger: GAGACGGGAACCAGGTGTTCACCCTCCAATACCTCC...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGTCTCCTGGTTCCTGTaGTCGAGGAGGCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDVSWFL*SRRHCN
Trigger: GTTACAATGCCTCCTCGAGCACAGGAACCAGGAGAC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTCTCCTGGTTCCTGTaGTCGAGGAGGCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVSWFL*SRRHCN
Trigger: GTTACAATGCCTCCTCGAGCACAGGAACCAGGAGAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR GCA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCGGCTTTGGATTCCTTTaGCATCTTTATCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCGFGFL*HLYLSG
Trigger: CCCGGACAGATAAAGATGGCAAAGGAATCCAAAGCC...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGTATCCTGTGGTCCTaGCTGCTTGGCTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPSILWS*LLGSSV
Trigger: AACACTGGAGCCAAGCAGGCAGGACCACAGGATACT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGTATCCTGTGGTCCTaGCTGCTTGGCTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSILWS*LLGSSV
Trigger: AACACTGGAGCCAAGCAGGCAGGACCACAGGATACT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGGGAGGCATTGTAACCTaGAGGGGGCGGTGGAAACCA +
Preference number: 4 (lower is better)
Translates to: QCNSNQRSYETALNIFLLGGIVT*RGRWKP
Trigger: TGGTTTCCACCGCCCCCTCCAGGTTACAATGCCTCC...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCTGGAGGGTGAACACCTaGTTCCCGTCTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFWRVNT*FPSPGS
Trigger: GGAACCAGGAGACGGGAACCAGGTGTTCACCCTCCA...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGGCTTTGGAGGTATTaGAGGGTGAACACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGLWRY*RVNTWF
Trigger: GAACCAGGTGTTCACCCTCCAATACCTCCAAAGCCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGGGATGGACCTGGCTaGAGTGTAATGCATCACTCC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRDGPG*SVMHHS
Trigger: GGAGTGATGCATTACACTCCAGCCAGGTCCATCCCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGGATGGACCTGGCTaGAGTGTAATGCATCACTCC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRDGPG*SVMHHS
Trigger: GGAGTGATGCATTACACTCCAGCCAGGTCCATCCCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCTGGGAGGATCTGGCTaGAAGAAATGGGAACCTAGA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLGGSG*KKWEPR
Trigger: TCTAGGTTCCCATTTCTTTCAGCCAGATCCTCCCAG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR TCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGACTGGGAGGATCTGGCTaGAAGAAATGGGAACCTAGA +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRLGGSG*KKWEPR
Trigger: TCTAGGTTCCCATTTCTTTCAGCCAGATCCTCCCAG...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGGAATTATGTCGGTTaGGCACCACCCTACCGTAAT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGNYVG*APPYRN
Trigger: ATTACGGTAGGGTGGTGCTCAACCGACATAATTCCC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGGAATTATGTCGGTTaGGCACCACCCTACCGTAAT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGNYVG*APPYRN
Trigger: ATTACGGTAGGGTGGTGCTCAACCGACATAATTCCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGTGTTGGCATTCAATaGACCGCCAGGTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGVGIQ*TARLQL
Trigger: AAGTTGCAACCTGGCGGTTCATTGAATGCCAACACC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGTGTTGGCATTCAATaGACCGCCAGGTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGVGIQ*TARLQL
Trigger: AAGTTGCAACCTGGCGGTTCATTGAATGCCAACACC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAGGTGTTGGCATTCAATaGACCGCCAGGTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSGVGIQ*TARLQL
Trigger: AAGTTGCAACCTGGCGGTTCATTGAATGCCAACACC...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp GTTCTGTTTCTTTCAGGAGTCACTTTAATGAGGCTGTCGAGACTTTGGCCCCCTTGTAGCAGGTTTTCCTaGACCTACTTCAATGTAACT +
Preference number: 4 (lower is better)
Translates to: VLFLSGVTLMRLSRLWPPCSRFS*TYFNVT
Trigger: AGTTACATTGAAGTAGGTGCAGGAAAACCTGCTACA...AGGGGGCCAAAGTCTCGACAGCCTCATTAAAGTGACTCCTGAAAGAAACAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATTCCCTGGGAGGATCTaGCTGAAAGAAATGGGAACC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPFPGRI*LKEMGT
Trigger: GGTTCCCATTTCTTTCAGCCAGATCCTCCCAGGGAA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTGTAGTGATTCCCTaGGAGGATCTGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPVVIP*EDLAER
Trigger: TCTTTCAGCCAGATCCTCCCAGGGAATCACTACAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCTGTAGTGATTCCCTaGGAGGATCTGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPVVIP*EDLAER
Trigger: TCTTTCAGCCAGATCCTCCCAGGGAATCACTACAGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGTGTTGGAGGTGTTaGCATTCAATGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWCWRC*HSMNRQ
Trigger: CTGGCGGTTCATTGAATGCCAACACCTCCAACACCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCATGGTGTTGGAGGTGTTaGCATTCAATGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSWCWRC*HSMNRQ
Trigger: CTGGCGGTTCATTGAATGCCAACACCTCCAACACCA...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATGGTGTTGGAGGTGTTaGCATTCAATGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPWCWRC*HSMNRQ
Trigger: CTGGCGGTTCATTGAATGCCAACACCTCCAACACCA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCTGGATGCTATGGTGTTaGAGGTGTTGGCATTCAATG +
Preference number: 4 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCWMLWC*RCWHSM
Trigger: CATTGAATGCCAACACCTCCAACACCATAGCATCCA...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGGAGAACTGGGCTTTaGAGGTATTGGAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRRTGL*RYWRVN
Trigger: GTTCACCCTCCAATACCTCCAAAGCCCAGTTCTCCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGAGAACTGGGCTTTaGAGGTATTGGAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRRTGL*RYWRVN
Trigger: GTTCACCCTCCAATACCTCCAAAGCCCAGTTCTCCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
3UTR CAA 72 bp CAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTaGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAG +
Preference number: 4 (lower is better)
Translates to: QRSYETALNIFL*PTRSDGSKQYK
Trigger: CTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCTTTTGTTCACCTCGTaGAAATCCTGCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLLFTS*KSCCFR
Trigger: ACGGAAGCAGCAGGATTTTCACGAGGTGAACAAAAG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACTTTTGTTCACCTCGTaGAAATCCTGCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPLLFTS*KSCCFR
Trigger: ACGGAAGCAGCAGGATTTTCACGAGGTGAACAAAAG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATGGGAATTATGTCGGTTaGGCACCACCCTACCGTAAT +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYGNYVG*APPYRN
Trigger: ATTACGGTAGGGTGGTGCTCAACCGACATAATTCCC...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGTCACTTCTCTGAAGTaGAGTGGCCACTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDVTSLK*SGHFDD
Trigger: ATCGTCAAAGTGGCCACTTCACTTCAGAGAAGTGAC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTCACTTCTCTGAAGTaGAGTGGCCACTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVTSLK*SGHFDD
Trigger: ATCGTCAAAGTGGCCACTTCACTTCAGAGAAGTGAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTTTGTCACTTCTCTaGAGTGAAGTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPLSLL*SEVATL
Trigger: CAAAGTGGCCACTTCACTTCAGAGAAGTGACAAAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAGTAGATTCTTTGAAGTaGAGATCAGGGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSVDSLK*RSGHQG
Trigger: TCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTAC...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGTTCCCTGAGTGGTaGTCTTCATCTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWFPEW*SSSHFL
Trigger: CAGGAAATGAGATGAAGAGCACCACTCAGGGAACCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGTGGAAACCAGGACTaGCTCTTCTTCTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGGNQD*LFFFTG
Trigger: TCCTGTAAAGAAGAAGAGGCAGTCCTGGTTTCCACC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR GCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCGTCTCCTGGTTCCTGTaGTCGAGGAGGCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFVSWFL*SRRHCN
Trigger: GTTACAATGCCTCCTCGAGCACAGGAACCAGGAGAC...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGCTTTGGATTCCTTTaGCATCTTTATCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGFGFL*HLYLSG
Trigger: CCCGGACAGATAAAGATGGCAAAGGAATCCAAAGCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGCTTTGGATTCCTTTaGCATCTTTATCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGFGFL*HLYLSG
Trigger: CCCGGACAGATAAAGATGGCAAAGGAATCCAAAGCC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATTTCCCTGGGAGGATCTaGCTGAAAGAAATGGGAACC +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYFPGRI*LKEMGT
Trigger: GGTTCCCATTTCTTTCAGCCAGATCCTCCCAGGGAA...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGTGTGGTTCCCTGAGTaGTGCTCTTCATCTCATTTC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDVWFPE*CSSSHF
Trigger: GAAATGAGATGAAGAGCACCACTCAGGGAACCACAC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTGTGGTTCCCTGAGTaGTGCTCTTCATCTCATTTC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVWFPE*CSSSHF
Trigger: GAAATGAGATGAAGAGCACCACTCAGGGAACCACAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACAGAAGTGGATGCTATaGTGTTGGAGGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPQKWML*CWRCWH
Trigger: ATGCCAACACCTCCAACACCATAGCATCCACTTCTG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAAGTGGATGCTATaGTGTTGGAGGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDQKWML*CWRCWH
Trigger: ATGCCAACACCTCCAACACCATAGCATCCACTTCTG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATAGGAGAACTGGGCTTTaGAGGTATTGGAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYRRTGL*RYWRVN
Trigger: GTTCACCCTCCAATACCTCCAAAGCCCAGTTCTCCT...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCTTATCCTGTCTCAGCTaGTTAGGAGAAGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCLSCLS*LGEETG
Trigger: TCCTGTTTCTTCTCCTAACCAGCTGAGACAGGATAA...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGCTGTCGAGACTTTaGCCCCCTTCAGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRLSRL*PPSVLF
Trigger: AAAAAGTACTGAAGGGGGCCAAAGTCTCGACAGCCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGAGGGTGAACACCTaGTTCCCTCTTCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWRVNT*FPLLLY
Trigger: GTAAAGAAGAAGAGGGAACCAGGTGTTCACCCTCCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGCATCATTTCTGTCTaGGATCCTGTCCAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSIISV*DPVQSV
Trigger: GACACTTTGGACAGGATCTCAGACAGAAATGATGCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGCATCATTTCTGTCTaGGATCCTGTCCAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPSIISV*DPVQSV
Trigger: GACACTTTGGACAGGATCTCAGACAGAAATGATGCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTGAAGTGGCCACTTTaGCGATGTTATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVKWPL*RCYQDP
Trigger: AGGATCTTGATAACATCGTCAAAGTGGCCACTTCAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCAGAGATATTCTCCTaGTATCCATCCTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPEIFS*YPSLGD
Trigger: ATCACCCAAGGATGGATATCAGGAGAATATCTCTGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCAGAGATATTCTCCTaGTATCCATCCTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPEIFS*YPSLGD
Trigger: ATCACCCAAGGATGGATATCAGGAGAATATCTCTGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAATGCATCACTCCTTTaGCACTGGAATCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPNASLL*HWNLEP
Trigger: TGGTTCCAGATTCCAGTGTCAAAGGAGTGATGCATT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACATATCTTGCTTCCTTaGCAGTTCTTCGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPHILLP*QFFGMS
Trigger: TGACATCCCGAAGAACTGTCAAGGAAGCAAGATATG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCCCTGTAGTGATTCCCTaGGAGGATCTGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFPVVIP*EDLAER
Trigger: TCTTTCAGCCAGATCCTCCCAGGGAATCACTACAGG...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCTGTCCAATGCATCATaGGAATTATGTCGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLSNAS*ELCRLS
Trigger: GCTCAACCGACATAATTCCCATGATGCATTGGACAG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGACTGTCCAATGCATCATaGGAATTATGTCGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRLSNAS*ELCRLS
Trigger: GCTCAACCGACATAATTCCCATGATGCATTGGACAG...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGATGCTATGGTGTTaGAGGTGTTGGCATTCAATG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWMLWC*RCWHSM
Trigger: CATTGAATGCCAACACCTCCAACACCATAGCATCCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATGGATGCTATGGTGTTaGAGGTGTTGGCATTCAATG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPWMLWC*RCWHSM
Trigger: CATTGAATGCCAACACCTCCAACACCATAGCATCCA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATAGGCTGTCGAGACTTTaGCCCCCTTCAGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYRLSRL*PPSVLF
Trigger: AAAAAGTACTGAAGGGGGCCAAAGTCTCGACAGCCT...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCAGCCAAACAAAGATGTaGTGCCCTCAATATCACATA +
Preference number: 4 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCSQTKM*CPQYHI
Trigger: TATGTGATATTGAGGGCACCACATCTTTGTTTGGCT...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGATTATCAAGGCTCTaGCCCCCAGTGGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRLSRL*PPVVFS
Trigger: TGAAAATACCACTGGGGGCCAGAGCCTTGATAATCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535157.5
CDS-3UTR TCA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGCTTTTGTTCACCTCGTaGAAATCCTGCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: QCNSNQRSYETALNIFLLLLFTS*KSCCFR
Trigger: ACGGAAGCAGCAGGATTTTCACGAGGTGAACAAAAG...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTTTGGATTTGCTCTaGAGAGACTATCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPLDLL*RDYQDL
Trigger: AAGGTCTTGATAGTCTCTTCAGAGCAAATCCAAAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCTTTGGATTTGCTCTaGAGAGACTATCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPLDLL*RDYQDL
Trigger: AAGGTCTTGATAGTCTCTTCAGAGCAAATCCAAAGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGACCTTTGGATTTGCTCTaGAGAGACTATCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRPLDLL*RDYQDL
Trigger: AAGGTCTTGATAGTCTCTTCAGAGCAAATCCAAAGG...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGGTACTCATATAGATaGGACTTTCAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGYSYR*DFQGFW
Trigger: CCAAAAGCCTTGAAAGTCTCATCTATATGAGTACCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAGTGCTTTTCATCTTaGTTTCCTTGTGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPECFSS*FPCARV
Trigger: AACTCTGGCACAAGGAAATCAAGATGAAAAGCACTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGAGTGCTTTTCATCTTaGTTTCCTTGTGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDECFSS*FPCARV
Trigger: AACTCTGGCACAAGGAAATCAAGATGAAAAGCACTC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCTGGTTCCCTGAGTGGTaGTCTTCATCTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFWFPEW*SSSHFL
Trigger: CAGGAAATGAGATGAAGAGCACCACTCAGGGAACCA...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGTCTTCACTTCTTCTaGTCGTTTTATTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGLHFF*SFYSSW
Trigger: CCAGGATGAATAAAACGAGCAGAAGAAGTGAAGACC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGTCTTCACTTCTTCTaGTCGTTTTATTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGLHFF*SFYSSW
Trigger: CCAGGATGAATAAAACGAGCAGAAGAAGTGAAGACC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACAAGACCTTGTTCACTaGTTTTGTTTGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPQDLVH*FCLLKG
Trigger: TCCCTTCAGCAAACAAAAGCAGTGAACAAGGTCTTG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGACCTTGTTCACTaGTTTTGTTTGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDQDLVH*FCLLKG
Trigger: TCCCTTCAGCAAACAAAAGCAGTGAACAAGGTCTTG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGGTGTGGTTCCCTGAGTaGTGCTCTTCATCTCATTTC +
Preference number: 4 (lower is better)
Translates to: QCNSNQRSYETALNIFLLVWFPE*CSSSHF
Trigger: GAAATGAGATGAAGAGCACCACTCAGGGAACCACAC...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATGGACATGCTCCTATTaGTTAGTTGGTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPWTCSY*LVGYPR
Trigger: CCTTGGATAACCAACTAACCAATAGGAGCATGTCCA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGACATGCTCCTATTaGTTAGTTGGTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWTCSY*LVGYPR
Trigger: CCTTGGATAACCAACTAACCAATAGGAGCATGTCCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCCAGAAGTGGATGCTATaGTGTTGGAGGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFQKWML*CWRCWH
Trigger: ATGCCAACACCTCCAACACCATAGCATCCACTTCTG...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTTATCCTGTCTCAGCTaGTTAGGAGAAGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLSCLS*LGEETG
Trigger: TCCTGTTTCTTCTCCTAACCAGCTGAGACAGGATAA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGACTTCCAAGGCTTTaGATTCCTTTGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGLPRL*IPLPSL
Trigger: TAAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGACTTCCAAGGCTTTaGATTCCTTTGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGLPRL*IPLPSL
Trigger: TAAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAGGACTTCCAAGGCTTTaGATTCCTTTGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSGLPRL*IPLPSL
Trigger: TAAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCC...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACTAGAGTTTATTCAGTaGAGTCTCAACCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPLEFIQ*SLNLYL
Trigger: CAGGTAGAGGTTGAGACTCCACTGAATAAACTCTAG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGTAAGGACCTCTATTaGGCAGAAAATCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSKDLY*AENQDF
Trigger: AAAGTCCTGATTTTCTGCTCAATAGAGGTCCTTACT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAAGTAAGGACCTCTATTaGGCAGAAAATCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSSKDLY*AENQDF
Trigger: AAAGTCCTGATTTTCTGCTCAATAGAGGTCCTTACT...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACTTTGTTACTTCCAGTaGTCTAAACATGGACATGCT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPLCYFQ*SKHGHA
Trigger: AGCATGTCCATGTTTAGATCACTGGAAGTAACAAAG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTTTGTTACTTCCAGTaGTCTAAACATGGACATGCT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSLCYFQ*SKHGHA
Trigger: AGCATGTCCATGTTTAGATCACTGGAAGTAACAAAG...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACACTGCTTTTGTTTGCTaGAGGGATCACTTTGATAAG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDTAFVC*RDHFDK
Trigger: CTTATCAAAGTGATCCCTTCAGCAAACAAAAGCAGT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAACTGCTTTTGTTTGCTaGAGGGATCACTTTGATAAG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPTAFVC*RDHFDK
Trigger: CTTATCAAAGTGATCCCTTCAGCAAACAAAAGCAGT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGGCTCTGATTGTTTCTaGTTACTGCAGGATTTACTT +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDGSDCF*LLQDLL
Trigger: AAGTAAATCCTGCAGTAATCAGAAACAATCAGAGCC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGGCTCTGATTGTTTCTaGTTACTGCAGGATTTACTT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPGSDCF*LLQDLL
Trigger: AAGTAAATCCTGCAGTAATCAGAAACAATCAGAGCC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATAATCAAGAATGTCCCTaGATGTGGTGTCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYNQECP*MWCQVF
Trigger: AAACACCTGACACCACATTCAGGGACATTCTTGATT...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATACTTTCCTGTCCAATaGATCATGGGAATTATGTCG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPYFPVQ*IMGIMS
Trigger: CGACATAATTCCCATGATGCATTGGACAGGAAAGTA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTACTTTCCTGTCCAATaGATCATGGGAATTATGTCG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDYFPVQ*IMGIMS
Trigger: CGACATAATTCCCATGATGCATTGGACAGGAAAGTA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGATACTTTCCTGTCCAATaGATCATGGGAATTATGTCG +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRYFPVQ*IMGIMS
Trigger: CGACATAATTCCCATGATGCATTGGACAGGAAAGTA...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCGGTGGAAACCAGGACTaGCTCTTCTTCTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFGGNQD*LFFFTG
Trigger: TCCTGTAAAGAAGAAGAGGCAGTCCTGGTTTCCACC...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAATCTTGATTTCCTTGTaGCAGAGTTATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPILISL*QSYGIH
Trigger: GTGGATTCCATAACTCTGGCACAAGGAAATCAAGAT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAAGAAAGCATATCTTaGTTCCTTGACAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPEESIS*FLDSSS
Trigger: CGAAGAACTGTCAAGGAAGCAAGATATGCTTTCTTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCATCAACATATTCCTTTTaGCTACTAGGTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSSTYSF*LLGLMG
Trigger: ACCCATCAGACCTAGTAGGCAAAAGGAATATGTTGA...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTACACCTGGTTTAGGTaGATGTATCTGCCTATTATC +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDYTWFR*MYLPII
Trigger: GATAATAGGCAGATACATCCACCTAAACCAGGTGTA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGATACACCTGGTTTAGGTaGATGTATCTGCCTATTATC +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRYTWFR*MYLPII
Trigger: GATAATAGGCAGATACATCCACCTAAACCAGGTGTA...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGATTTTCCAAGTCTTaGTTCCCTTGGTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRFSKS*FPWLVL
Trigger: CAGAACTAACCAAGGGAACCAAGACTTGGAAAATCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAAGATTTTCCAAGTCTTaGTTCCCTTGGTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSRFSKS*FPWLVL
Trigger: CAGAACTAACCAAGGGAACCAAGACTTGGAAAATCT...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTGATATCCATCCTTaGGTGATTTACTATTCTCCA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPDIHP*VIYYSP
Trigger: TGGAGAATAGTAAATCACCCAAGGATGGATATCAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCTGATATCCATCCTTaGGTGATTTACTATTCTCCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPDIHP*VIYYSP
Trigger: TGGAGAATAGTAAATCACCCAAGGATGGATATCAGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACTTGTGCCAGAGTTATaGAATCCACTTTGCCATAAT +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPLVPEL*NPLCHN
Trigger: ATTATGGCAAAGTGGATTCCATAACTCTGGCACAAG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGGGGTACTCATATAGATaGGACTTTCAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QCNSNQRSYETALNIFLLGYSYR*DFQGFW
Trigger: CCAAAAGCCTTGAAAGTCTCATCTATATGAGTACCC...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACATATCCATCCTTGGGTaGTTTACTATTCTCCACATA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDISILG*FTILHI
Trigger: TATGTGGAGAATAGTAAATCACCCAAGGATGGATAT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAACATATCTCTTTCAATaGCAGACCTATCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPTYLFQ*QTYQKL
Trigger: CAACTTCTGATAGGTCTGTCATTGAAAGAGATATGT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACACATATCTCTTTCAATaGCAGACCTATCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDTYLFQ*QTYQKL
Trigger: CAACTTCTGATAGGTCTGTCATTGAAAGAGATATGT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAATCAAGGTAGGAGATTaGCTTACCCTTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSIKVGD*LTLSHF
Trigger: AAAATGAGAAAGGGTAAGTCAATCTCCTACCTTGAT...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR TCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAAAATCAGAGGTCCTATaGAACAGCACTCAACATATT +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSKSEVL*NSTQHI
Trigger: AATATGTTGAGTGCTGTTTCATAGGACCTCTGATTT...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATTCTACCTTTGGATTTaGTCTGAAGAGACTATCAAG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPFYLWI*SEETIK
Trigger: CTTGATAGTCTCTTCAGAGCAAATCCAAAGGTAGAA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTTCTACCTTTGGATTTaGTCTGAAGAGACTATCAAG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDFYLWI*SEETIK
Trigger: CTTGATAGTCTCTTCAGAGCAAATCCAAAGGTAGAA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGATTCTACCTTTGGATTTaGTCTGAAGAGACTATCAAG +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRFYLWI*SEETIK
Trigger: CTTGATAGTCTCTTCAGAGCAAATCCAAAGGTAGAA...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCTCAGTTCTCACCTTCTaGTCGTTTTATTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFSVLTF*SFYSSW
Trigger: CCAGGATGAATAAAACGAGCAGAAGGTGAGAACTGA...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATTCTGTATATACACCTaGTTTAGGTGGATGTATCTG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPFCIYT*FRWMYL
Trigger: CAGATACATCCACCTAAACCAGGTGTATATACAGAA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTTCTGTATATACACCTaGTTTAGGTGGATGTATCTG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDFCIYT*FRWMYL
Trigger: CAGATACATCCACCTAAACCAGGTGTATATACAGAA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGATTATCAAGGCTCTaGCCCCTCGTAATATTTTTA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRLSRL*PLVIFL
Trigger: TAAAAATATTACGAGGGGCCAGAGCCTTGATAATCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGATTATCAAGGCTCTaGCCCCTCGTAATATTTTTA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRLSRL*PLVIFL
Trigger: TAAAAATATTACGAGGGGCCAGAGCCTTGATAATCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000377246.7
CDS-3UTR CCA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGAAGATTATCAAGGCTCTaGCCCCTCGTAATATTTTTA +
Preference number: 4 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRRLSRL*PLVIFL
Trigger: TAAAAATATTACGAGGGGCCAGAGCCTTGATAATCT...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGTCTTTGGAACCTTaGTTACTTCTCTTTACTTCA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRSLEP*LLLFTS
Trigger: TGAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp AACATATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCAAGGTCTTTGGAACCTTaGTTACTTCTCTTTACTTCA +
Preference number: 4 (lower is better)
Translates to: NIFLLPTRSDGSKQYKSSRSLEP*LLLFTS
Trigger: TGAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCT...TGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGGTCTTTGGAACCTTaGTTACTTCTCTTTACTTCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRSLEP*LLLFTS
Trigger: TGAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAAGTCTTGGTTCCCTTaGTTAGTTCTGTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPKSWFP*LVLFLS
Trigger: TGAAAGAAACAGAACTAACCAAGGGAACCAAGACTT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAAGTCTTGGTTCCCTTaGTTAGTTCTGTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDKSWFP*LVLFLS
Trigger: TGAAAGAAACAGAACTAACCAAGGGAACCAAGACTT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGTTAGCAAGATCTTaGTTTCTTTGGTTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRLARS*FLWLFV
Trigger: CACAAACAACCAAAGAAACCAAGATCTTGCTAACCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGGTTAGCAAGATCTTaGTTTCTTTGGTTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRLARS*FLWLFV
Trigger: CACAAACAACCAAAGAAACCAAGATCTTGCTAACCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCAAAGGCTTCTCAATGTaGCTCTCGCTGTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFKGFSM*LSLCNF
Trigger: AAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
3UTR CAA 72 bp TTTGACACTGGAATCTGGAACCATTTGAACTTTTTATaGCTAACTCTAGCCAGAGACCAGATGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FDTGIWNHLNFL*LTLARDQMALF
Trigger: AAAAAGAGCCATCTGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR TCA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGGTTTTCAGGACCAAATaGCCAAAAAGAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: QCNSNQRSYETALNIFLLVFRTK*PKRALM
Trigger: CATCAAAGCTCTTTTTGGTCATTTGGTCCTGAAAAC...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATTTCTGTATATACACCTaGTTTAGGTGGATGTATCTG +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYFCIYT*FRWMYL
Trigger: CAGATACATCCACCTAAACCAGGTGTATATACAGAA...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAAATTTTCCAGGTTCTaGTCTCGATTAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDKFSRF*SRLVFL
Trigger: TAGAAACACTAATCGAGACCAGAACCTGGAAAATTT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CCA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAAATTTTCCAGGTTCTaGTCTCGATTAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HWNLEPFELFIANSSQRPKFSRF*SRLVFL
Trigger: TAGAAACACTAATCGAGACCAGAACCTGGAAAATTT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR GCA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCAGTACAAGAGTTCACTaGCACAAAGGAAAGCATAAC +
Preference number: 4 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFSTRVH*HKGKHN
Trigger: GTTATGCTTTCCTTTGTGGCAGTGAACTCTTGTACT...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR GCA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATCAAACAAAGATGTGGTaGCCTCAATATCACATAATT +
Preference number: 4 (lower is better)
Translates to: SLERLLNVALAVQFCPLYQTKMW*PQYHII
Trigger: AATTATGTGATATTGAGGGCACCACATCTTTGTTTG...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CCA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCAAGTCTTGGTTCCCTTaGTTAGTTCTGTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HFDEIIKALAPRNIFICFKSWFP*LVLFLS
Trigger: TGAAAGAAACAGAACTAACCAAGGGAACCAAGACTT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GTTCTGTTTCTTTCAGGAGTCACTTTAATGAGGCTGTCGAGACTTTGGCCCCCTCGGACTTCCAAGGCTTaGGATTCCTTTGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: VLFLSGVTLMRLSRLWPPRTSKA*DSFAIF
Trigger: AAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCCG...AGGGGGCCAAAGTCTCGACAGCCTCATTAAAGTGACTCCTGAAAGAAACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS GCA 90 bp TCCACATATGTCCTTGTGTACACAACAGTATCCTGTGGTCCTGCCTaGTTGGCTCCAGTGTTAGAGCTTCCATTCTTGTTTTCAGACACA +
Preference number: 5 (lower is better)
Translates to: STYVLVYTTVSCGPA*LAPVLELPFLFSDT
Trigger: TGTGTCTGAAAACAAGAATGGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS GCA 90 bp ATTCTCCACATATGTCCTTGTGTACACAACAGTATCCTGTGGTCCTaGCTGCTTGGCTCCAGTGTTAGAGCTTCCATTCTTGTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: ILHICPCVHNSILWS*LLGSSVRASILVFR
Trigger: TCTGAAAACAAGAATGGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATATGTGGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CCA 90 bp GCAGAAAATCAGGACTTTTTGGCTAACCAGCCTGTAGTGATTCCCTaGGAGGATCTGGCTGAAAGAAATGGGAACCTAGAGTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: AENQDFLANQPVVIP*EDLAERNGNLEFIQ
Trigger: CTGAATAAACTCTAGGTTCCCATTTCTTTCAGCCAGATCCTCCCAGGGAATCACTACAGGCTGGTTAGCCAAAAAGTCCTGATTTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000471491.5
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGGCTTTGGAGGTATaGGAGGGTGAACACCTGGTT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWALEV*EGEHLV
Trigger: AACCAGGTGTTCACCCTCCAATACCTCCAAAGCCCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATGGGCTTTGGAGGTATaGGAGGGTGAACACCTGGTT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPWALEV*EGEHLV
Trigger: AACCAGGTGTTCACCCTCCAATACCTCCAAAGCCCA...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCAGGCTTTGGATTCCTTaGCCATCTTTATCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCRLWIP*PSLSVR
Trigger: CCGGACAGATAAAGATGGCAAAGGAATCCAAAGCCT...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGAGGCTGTCGAGACTTaGGCCCCCTTCAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDEAVET*APFSTF
Trigger: AAAAGTACTGAAGGGGGCCAAAGTCTCGACAGCCTC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAGGCTGTCGAGACTTaGGCCCCCTTCAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPEAVET*APFSTF
Trigger: AAAAGTACTGAAGGGGGCCAAAGTCTCGACAGCCTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACATGGTGTTGGAGGTGTaGGCATTCAATGAACCGCCA +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDMVLEV*AFNEPP
Trigger: TGGCGGTTCATTGAATGCCAACACCTCCAACACCAT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAATGGTGTTGGAGGTGTaGGCATTCAATGAACCGCCA +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPMVLEV*AFNEPP
Trigger: TGGCGGTTCATTGAATGCCAACACCTCCAACACCAT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGAATGGTGTTGGAGGTGTaGGCATTCAATGAACCGCCA +
Preference number: 5 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRMVLEV*AFNEPP
Trigger: TGGCGGTTCATTGAATGCCAACACCTCCAACACCAT...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GTTCTGTTTCTTTCAGGAGTCACTTTAATGAGGCTGTCGAGACTTTGGCCCCCTCATCAAGGTAGGAGATaGACTTACCCTTTCTCATTT +
Preference number: 5 (lower is better)
Translates to: VLFLSGVTLMRLSRLWPPHQGRR*TYPFSF
Trigger: AAATGAGAAAGGGTAAGTCAATCTCCTACCTTGATG...AGGGGGCCAAAGTCTCGACAGCCTCATTAAAGTGACTCCTGAAAGAAACAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTGGATGCTATGGTGTaGGAGGTGTTGGCATTCAAT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVDAMV*EVLAFN
Trigger: ATTGAATGCCAACACCTCCAACACCATAGCATCCAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGTGGATGCTATGGTGTaGGAGGTGTTGGCATTCAAT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDVDAMV*EVLAFN
Trigger: ATTGAATGCCAACACCTCCAACACCATAGCATCCAC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGAGTGGATGCTATGGTGTaGGAGGTGTTGGCATTCAAT +
Preference number: 5 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRVDAMV*EVLAFN
Trigger: ATTGAATGCCAACACCTCCAACACCATAGCATCCAC...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CAATGTAACTCAAATCAGAGGTCCTATGAAACAGCACTCAACATATTCCTTTTGTGGGCTTTGGAGGTATaGGAGGGTGAACACCTGGTT +
Preference number: 5 (lower is better)
Translates to: QCNSNQRSYETALNIFLLWALEV*EGEHLV
Trigger: AACCAGGTGTTCACCCTCCAATACCTCCAAAGCCCA...CAAAAGGAATATGTTGAGTGCTGTTTCATAGGACCTCTGATTTGAGTTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGGCTTTGGATTCCTTaGCCATCTTTATCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRLWIP*PSLSVR
Trigger: CCGGACAGATAAAGATGGCAAAGGAATCCAAAGCCT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGGCTTTGGATTCCTTaGCCATCTTTATCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRLWIP*PSLSVR
Trigger: CCGGACAGATAAAGATGGCAAAGGAATCCAAAGCCT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACGGACTTCCAAGGCTTaGGATTCCTTTGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPRTSKA*DSFAIF
Trigger: AAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCCG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCGGACTTCCAAGGCTTaGGATTCCTTTGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDRTSKA*DSFAIF
Trigger: AAAGATGGCAAAGGAATCCAAAGCCTTGGAAGTCCG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCGAGGCTGTCGAGACTTaGGCCCCCTTCAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFEAVET*APFSTF
Trigger: AAAAGTACTGAAGGGGGCCAAAGTCTCGACAGCCTC...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGCATATCTTGCTTCCTaGACAGTTCTTCGGGATGTC +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPAYLAS*TVLRDV
Trigger: GACATCCCGAAGAACTGTCAAGGAAGCAAGATATGC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGCATATCTTGCTTCCTaGACAGTTCTTCGGGATGTC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDAYLAS*TVLRDV
Trigger: GACATCCCGAAGAACTGTCAAGGAAGCAAGATATGC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGAAAATCAGGACTTTTaGGCTAACCAGCCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDENQDF*ANQPVV
Trigger: CACTACAGGCTGGTTAGCCAAAAAGTCCTGATTTTC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAAAATCAGGACTTTTaGGCTAACCAGCCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPENQDF*ANQPVV
Trigger: CACTACAGGCTGGTTAGCCAAAAAGTCCTGATTTTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTTTCTCAAGGTAACATaGGACATGCTGCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDFLKVT*DMLPSS
Trigger: ACTGGAAGGCAGCATGTCCAATGTTACCTTGAGAAA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCCTTTCAGCAGATCTGTaGGTTTCTGTATATACACCT +
Preference number: 5 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCLSADL*VSVYTP
Trigger: AGGTGTATATACAGAAACCAACAGATCTGCTGAAAG...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAGTGAAGTGGCCACTTaGACGATGTTATCAAGATCC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSEVAT*TMLSRS
Trigger: GGATCTTGATAACATCGTCAAAGTGGCCACTTCACT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGTGAAGTGGCCACTTaGACGATGTTATCAAGATCC +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPSEVAT*TMLSRS
Trigger: GGATCTTGATAACATCGTCAAAGTGGCCACTTCACT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAACTTCAGGGGTCACTTaGATGAGATTATCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPTSGVT*MRLSRL
Trigger: GAGCCTTGATAATCTCATCAAAGTGACCCCTGAAGT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp TATTCCTTTTGCCTACTAGGTCTGATGGGTCAAAGCAGTACAAGAGTTCACTGCAAGATTTTCCAAGTCTaGGTTCCCTTGGTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: YSFCLLGLMGQSSTRVHCKIFQV*VPLVSS
Trigger: AGAACTAACCAAGGGAACCAAGACTTGGAAAATCTT...GCAGTGAACTCTTGTACTGCTTTGACCCATCAGACCTAGTAGGCAAAAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCCTTGTTCACTGCTTTaGTTTGCTGAAGGGATCACT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDPCSLL*FAEGIT
Trigger: AGTGATCCCTTCAGCAAACAAAAGCAGTGAACAAGG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACCTTGTTCACTGCTTTaGTTTGCTGAAGGGATCACT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPPCSLL*FAEGIT
Trigger: AGTGATCCCTTCAGCAAACAAAAGCAGTGAACAAGG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAATGGACATGCTCCTATaGGTTAGTTGGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPMDMLL*VSWLSK
Trigger: CTTGGATAACCAACTAACCAATAGGAGCATGTCCAT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAGTCTTGGTTCCCTaGGTTAGTTCTGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDQVLVP*VSSVSF
Trigger: GAAAGAAACAGAACTAACCAAGGGAACCAAGACTTG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTCTCCACATATGTCCTaGTGTACACAACAGTATCCT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDSPHMS*CTQQYP
Trigger: AGGATACTGTTGTGTACACAAGGACATATGTGGAGA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CCA 90 bp CCTTATATTTCTTTCAGCAGATCTGTTGGTTTCTGTATATACACCTaGTTTAGGTGGATGTATCTGCCTATTATCCTGTCTCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: PYISFSRSVGFCIYT*FRWMYLPIILSQLV
Trigger: AACCAGCTGAGACAGGATAATAGGCAGATACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCTGCTGAAAGAAATATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCGAAAATCAGGACTTTTaGGCTAACCAGCCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFENQDF*ANQPVV
Trigger: CACTACAGGCTGGTTAGCCAAAAAGTCCTGATTTTC...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCTTTCTCAAGGTAACATaGGACATGCTGCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFFLKVT*DMLPSS
Trigger: ACTGGAAGGCAGCATGTCCAATGTTACCTTGAGAAA...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCTTTCAGCAGATCTGTaGGTTTCTGTATATACACCT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDLSADL*VSVYTP
Trigger: AGGTGTATATACAGAAACCAACAGATCTGCTGAAAG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACTTTCAGCAGATCTGTaGGTTTCTGTATATACACCT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPLSADL*VSVYTP
Trigger: AGGTGTATATACAGAAACCAACAGATCTGCTGAAAG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCACTTCAGGGGTCACTTaGATGAGATTATCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFTSGVT*MRLSRL
Trigger: GAGCCTTGATAATCTCATCAAAGTGACCCCTGAAGT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAAGGTCTTTGGAACCTaGGTTACTTCTCTTTACTTC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDKVFGT*VTSLYF
Trigger: GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAAGGTCTTTGGAACCTaGGTTACTTCTCTTTACTTC +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPKVFGT*VTSLYF
Trigger: GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp AGTTTAGAAAGGCTTCTCAATGTGGCTCTCGCTGTGCAATTTTGTCCTTTATATCAAGTCTTGGTTCCCTaGGTTAGTTCTGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLERLLNVALAVQFCPLYQVLVP*VSSVSF
Trigger: GAAAGAAACAGAACTAACCAAGGGAACCAAGACTTG...ATATAAAGGACAAAATTGCACAGCGAGAGCCACATTGAGAAGCCTTTCTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAAAGATTTTCCAAGTCTaGGTTCCCTTGGTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPKIFQV*VPLVSS
Trigger: AGAACTAACCAAGGGAACCAAGACTTGGAAAATCTT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGCTGAAGGGATCACTTaGATAAGATTTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDAEGIT*IRFSKS
Trigger: AGACTTGGAAAATCTTATCAAAGTGATCCCTTCAGC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGCTGAAGGGATCACTTaGATAAGATTTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPAEGIT*IRFSKS
Trigger: AGACTTGGAAAATCTTATCAAAGTGATCCCTTCAGC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGTGTTTTTGACAGCTTaGGGGCTGACATTAATATGT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPVFLTA*GLTLIC
Trigger: ACATATTAATGTCAGCCCCAAAGCTGTCAAAAACAC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGTGTTTTTGACAGCTTaGGGGCTGACATTAATATGT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDVFLTA*GLTLIC
Trigger: ACATATTAATGTCAGCCCCAAAGCTGTCAAAAACAC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAGGTTAGCAAGATCTaGGTTTCTTTGGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPEVSKI*VSLVVC
Trigger: ACAAACAACCAAAGAAACCAAGATCTTGCTAACCTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGAGGTTAGCAAGATCTaGGTTTCTTTGGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDEVSKI*VSLVVC
Trigger: ACAAACAACCAAAGAAACCAAGATCTTGCTAACCTC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAACTGCAGGATTTACTTaGATGAGGTTAGCAAGATCT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPTAGFT*MRLARS
Trigger: AGATCTTGCTAACCTCATCAAAGTAAATCCTGCAGT...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACACTGCAGGATTTACTTaGATGAGGTTAGCAAGATCT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDTAGFT*MRLARS
Trigger: AGATCTTGCTAACCTCATCAAAGTAAATCCTGCAGT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CCA 90 bp ACTTATATTTCTTTCAGCAGATCTGTTGGTTTCTGTATATACACCTaGTTTAGGTGGATGTATCTGCCTATTATCCTGTCTCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: TYISFSRSVGFCIYT*FRWMYLPIILSQLV
Trigger: AACCAGCTGAGACAGGATAATAGGCAGATACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCTGCTGAAAGAAATATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377246.7
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTGGTTATCCAAGGTATaGGCCTTATATGTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDWLSKV*ALYVLA
Trigger: TGCTAAAACATATAAGGCCAATACCTTGGATAACCA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCAGAGACTATCAAGACCTaGATTCCTATTCAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPETIKT*IPIQAF
Trigger: AAAAGCTTGAATAGGAATCAAGGTCTTGATAGTCTC...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACGAGACTATCAAGACCTaGATTCCTATTCAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDETIKT*IPIQAF
Trigger: AAAAGCTTGAATAGGAATCAAGGTCTTGATAGTCTC...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GATCGAATATACTGTAGATTCTTTGAAGTGAAGATCAGGGCACCAGGGATTAGAGAGACTATCAAGACCTaGATTCCTATTCAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: DRIYCRFFEVKIRAPGIRETIKT*IPIQAF
Trigger: AAAAGCTTGAATAGGAATCAAGGTCTTGATAGTCTC...TCTAATCCCTGGTGCCCTGATCTTCACTTCAAAGAATCTACAGTATATTCGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACAAGTTATTAAGGTCTTaGGAACCTTGGTTACTTCTC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDKLLRS*EPWLLL
Trigger: GAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTT...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACTTTTCCAAAGGCTGCTaGCATATTTCACACTTAAAG +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDFSKGC*HISHLK
Trigger: CTTTAAGTGTGAAATATGCAAGCAGCCTTTGGAAAA...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp GACACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCATTTGAACTTTTTATaGCTAACTCTAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: DTGIWNHLNFLLLTLARDHLNFL*LTLARD
Trigger: GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATG...GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTGGAATCTGGAACCATTTGAACTTTTTATTGCTAACTCTAGCCAGAGACCACATTTGAACTTTTTATaGCTAACTCTAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: HWNLEPFELFIANSSQRPHLNFL*LTLARD
Trigger: GTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATG...TGGTCTCTGGCTAGAGTTAGCAATAAAAAGTTCAAATGGTTCCAGATTCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS-3UTR CAA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCCTCAACATATTCCTTTaGCCTACTAGGTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFLNIFL*PTRSDG
Trigger: CCCATCAGACCTAGTAGGCAAAAGGAATATGTTGAG...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS TCA 90 bp TTTGGATTCCTTTGCCATCTTTATCTGTCCGGGTACTCATATAGATaGGACTTTCAAGGCTTTTGGCTCTATTCAAGCTTTTGTTCATTT +
Preference number: 5 (lower is better)
Translates to: FGFLCHLYLSGYSYR*DFQGFWLYSSFCSF
Trigger: AAATGAACAAAAGCTTGAATAGAGCCAAAAGCCTTGAAAGTCTCATCTATATGAGTACCCGGACAGATAAAGATGGCAAAGGAATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469982.1
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCAAGGTCTTTGGAACCTaGGTTACTTCTCTTTACTTC +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFKVFGT*VTSLYF
Trigger: GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTTTGATGAGATTATCAAGGCTCTGGCCCCTCGTAATATTTTTATTTGTTTCAAGTTATTAAGGTCTTaGGAACCTTGGTTACTTCTC +
Preference number: 5 (lower is better)
Translates to: HFDEIIKALAPRNIFICFKLLRS*EPWLLL
Trigger: GAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTT...GAAACAAATAAAAATATTACGAGGGGCCAGAGCCTTGATAATCTCATCAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS-3UTR CAA 90 bp CACTTTGATGAAGTTATTAAGGTCTTTGGAACCTTGGTTACTTCTCTTTACTTCGCTGAAGGGATCACTTaGATAAGATTTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: HFDEVIKVFGTLVTSLYFAEGIT*IRFSKS
Trigger: AGACTTGGAAAATCTTATCAAAGTGATCCCTTCAGC...GAAGTAAAGAGAAGTAACCAAGGTTCCAAAGACCTTAATAACTTCATCAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS GCA 72 bp GAGGGTGAACACCTGGTTCCCGTCTCCTGGTTCCTGTaGTCGAGGAGGCATTGTAACCTGGAGGGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: EGEHLVPVSWFL*SRRHCNLEGAV
Trigger: CACCGCCCCCTCCAGGTTACAATGCCTCCTCGAGCACAGGAACCAGGAGACGGGAACCAGGTGTTCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
CDS CCA 72 bp TCTCCTGGTTCCTGTGCTCGAGGAGGCATTGTAACCTaGAGGGGGCGGTGGAAACCAGGACTGCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SPGSCARGGIVT*RGRWKPGLPLL
Trigger: AAGAAGAGGCAGTCCTGGTTTCCACCGCCCCCTCCAGGTTACAATGCCTCCTCGAGCACAGGAACCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
CDS CCA 72 bp CTCCACATATGTCCTTGTGTACACAACAGTATCCTGTaGTCCTGCCTGCTTGGCTCCAGTGTTAGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: LHICPCVHNSIL*SCLLGSSVRAS
Trigger: GGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATATGTGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CCA 72 bp CAGGACTTTTTGGCTAACCAGCCTGTAGTGATTCCCTaGGAGGATCTGGCTGAAAGAAATGGGAACCTAGAG +
Preference number: 6 (lower is better)
Translates to: QDFLANQPVVIP*EDLAERNGNLE
Trigger: CTCTAGGTTCCCATTTCTTTCAGCCAGATCCTCCCAGGGAATCACTACAGGCTGGTTAGCCAAAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000471491.5
ENST00000535157.5
CDS CCA 72 bp CGTGAAAATCCTGCTGCTTCCGTGTGGTTCCCTGAGTaGTGCTCTTCATCTCATTTCCTGTGGGAGACATTT +
Preference number: 6 (lower is better)
Translates to: RENPAASVWFPE*CSSSHFLWETF
Trigger: AAATGTCTCCCACAGGAAATGAGATGAAGAGCACCACTCAGGGAACCACACGGAAGCAGCAGGATTTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS GCA 72 bp GAAAATCCTGCTGCTTCCGTGTGGTTCCCTGAGTGGTaGTCTTCATCTCATTTCCTGTGGGAGACATTTTTC +
Preference number: 6 (lower is better)
Translates to: ENPAASVWFPEW*SSSHFLWETFF
Trigger: GAAAAATGTCTCCCACAGGAAATGAGATGAAGAGCACCACTCAGGGAACCACACGGAAGCAGCAGGATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS GCA 72 bp GTCCTTGTGTACACAACAGTATCCTGTGGTCCTGCCTaGTTGGCTCCAGTGTTAGAGCTTCCATTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: VLVYTTVSCGPA*LAPVLELPFLF
Trigger: AAACAAGAATGGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 72 bp TTTACAGGAGTAGTAGCAGAAGTGGATGCTATGGTGTaGGAGGTGTTGGCATTCAATGAACCGCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: FTGVVAEVDAMV*EVLAFNEPPGC
Trigger: GCAACCTGGCGGTTCATTGAATGCCAACACCTCCAACACCATAGCATCCACTTCTGCTACTACTCCTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS GCA 72 bp ATATGTCCTTGTGTACACAACAGTATCCTGTGGTCCTaGCTGCTTGGCTCCAGTGTTAGAGCTTCCATTCTT +
Preference number: 6 (lower is better)
Translates to: ICPCVHNSILWS*LLGSSVRASIL
Trigger: AAGAATGGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 72 bp GTAGTAGCAGAAGTGGATGCTATGGTGTTGGAGGTGTaGGCATTCAATGAACCGCCAGGTTGCAACTTTGTT +
Preference number: 6 (lower is better)
Translates to: VVAEVDAMVLEV*AFNEPPGCNFV
Trigger: AACAAAGTTGCAACCTGGCGGTTCATTGAATGCCAACACCTCCAACACCATAGCATCCACTTCTGCTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS CAA 72 bp CTTGTGTACACAACAGTATCCTGTGGTCCTGCCTGCTaGGCTCCAGTGTTAGAGCTTCCATTCTTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LVYTTVSCGPAC*APVLELPFLFS
Trigger: TGAAAACAAGAATGGAAGCTCTAACACTGGAGCCAAGCAGGCAGGACCACAGGATACTGTTGTGTACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 90 bp TTTACAGGAGTAGTAGCAGAAGTGGATGCTATGGTGTTGGAGGTGTaGGCATTCAATGAACCGCCAGGTTGCAACTTTGTTACTTCCAGT +
Preference number: 6 (lower is better)
Translates to: FTGVVAEVDAMVLEV*AFNEPPGCNFVTSS
Trigger: ACTGGAAGTAACAAAGTTGCAACCTGGCGGTTCATTGAATGCCAACACCTCCAACACCATAGCATCCACTTCTGCTACTACTCCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS CAA 90 bp CTCTTCTTCTTTACAGGAGTAGTAGCAGAAGTGGATGCTATGGTGTaGGAGGTGTTGGCATTCAATGAACCGCCAGGTTGCAACTTTGTT +
Preference number: 6 (lower is better)
Translates to: LFFFTGVVAEVDAMV*EVLAFNEPPGCNFV
Trigger: AACAAAGTTGCAACCTGGCGGTTCATTGAATGCCAACACCTCCAACACCATAGCATCCACTTCTGCTACTACTCCTGTAAAGAAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS CAA 72 bp CATCCTTGGGTGATTTACTATTCTCCACATATGTCCTaGTGTACACAACAGTATCCTGTGGTCCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HPWVIYYSPHMS*CTQQYPVVLPA
Trigger: AGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATATGTGGAGAATAGTAAATCACCCAAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 72 bp AAGGCTCTGGCCCCCTTTCTCATTTTTGTCAGTCCTTaGATTAACTTTAATCGGACTTCCAAGGCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: KALAPFLIFVSP*INFNRTSKALD
Trigger: ATCCAAAGCCTTGGAAGTCCGATTAAAGTTAATCAAAGGACTGACAAAAATGAGAAAGGGGGCCAGAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469982.1
CDS TCA 72 bp CACCTTTGTCACTTCTCTGAAGTGAAGTGGCCACTTTaGCGATGTTATCAAGATCCTGACTCCTTATATTTC +
Preference number: 6 (lower is better)
Translates to: HLCHFSEVKWPL*RCYQDPDSLYF
Trigger: GAAATATAAGGAGTCAGGATCTTGATAACATCGTCAAAGTGGCCACTTCACTTCAGAGAAGTGACAAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349847.4
ENST00000535157.5
CDS CCA 72 bp AGATCTGTTGGTTTCTGTATATACACCTGGTTTAGGTaGATGTATCTGCCTATTATCCTGTCTCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: RSVGFCIYTWFR*MYLPIILSQLV
Trigger: AACCAGCTGAGACAGGATAATAGGCAGATACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS CAA 90 bp CTAAACATGGACATGCTCCTATTGGTTAGTTGGTTATCCAAGGTATaGGCCTTATATGTTTTAGCAGCATCATTTCTGTCTGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: LNMDMLLLVSWLSKV*ALYVLAASFLSEIL
Trigger: CAGGATCTCAGACAGAAATGATGCTGCTAAAACATATAAGGCCAATACCTTGGATAACCAACTAACCAATAGGAGCATGTCCATGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS TCA 72 bp CTTTGCCATCTTTATCTGTCCGGGTACTCATATAGATaGGACTTTCAAGGCTTTTGGCTCTATTCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: LCHLYLSGYSYR*DFQGFWLYSSF
Trigger: AAAGCTTGAATAGAGCCAAAAGCCTTGAAAGTCTCATCTATATGAGTACCCGGACAGATAAAGATGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469982.1
CDS CCA 72 bp TCTTTCAGCAGATCTGTTGGTTTCTGTATATACACCTaGTTTAGGTGGATGTATCTGCCTATTATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SFSRSVGFCIYT*FRWMYLPIILS
Trigger: AGACAGGATAATAGGCAGATACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCTGCTGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000471491.5
ENST00000535157.5
CDS GCA 72 bp CAAATACTATCACCCGCTTGTAGATTTTCCAAAGGCTaGTTGCATATTTCACACTTAAAGCAAGTAGAATGG +
Preference number: 6 (lower is better)
Translates to: QILSPACRFSKG*LHISHLKQVEW
Trigger: CCATTCTACTTGCTTTAAGTGTGAAATATGCAAGCAGCCTTTGGAAAATCTACAAGCGGGTGATAGTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 72 bp GACATGCTCCTATTGGTTAGTTGGTTATCCAAGGTATaGGCCTTATATGTTTTAGCAGCATCATTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: DMLLLVSWLSKV*ALYVLAASFLS
Trigger: AGACAGAAATGATGCTGCTAAAACATATAAGGCCAATACCTTGGATAACCAACTAACCAATAGGAGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349847.4
ENST00000377246.7
ENST00000535157.5
CDS CAA 72 bp GAGATTGACTTACCCTTTCTCATTTTTGTCAGTCCTTaGATTAACTTTAATCGGACTTCCAAGGCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: EIDLPFLIFVSP*INFNRTSKALD
Trigger: ATCCAAAGCCTTGGAAGTCCGATTAAAGTTAATCAAAGGACTGACAAAAATGAGAAAGGGTAAGTCAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471491.5
CDS CAA 90 bp ATGAGATTATCCAATTCTTCACTTATATTTCTTTCAGCAGATCTGTaGGTTTCTGTATATACACCTGGTTTAGGTGGATGTATCTGCCTA +
Preference number: 6 (lower is better)
Translates to: MRLSNSSLIFLSADL*VSVYTPGLGGCICL
Trigger: TAGGCAGATACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCTGCTGAAAGAAATATAAGTGAAGAATTGGATAATCTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377246.7
ENST00000471491.5
CDS CAA 72 bp TCCAATTCTTCACTTATATTTCTTTCAGCAGATCTGTaGGTTTCTGTATATACACCTGGTTTAGGTGGATGT +
Preference number: 6 (lower is better)
Translates to: SNSSLIFLSADL*VSVYTPGLGGC
Trigger: ACATCCACCTAAACCAGGTGTATATACAGAAACCAACAGATCTGCTGAAAGAAATATAAGTGAAGAATTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377246.7
ENST00000471491.5