RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCARF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000244486

Ensembl transcript IDs: ENST00000494535.1, ENST00000622235.5, ENST00000623402.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCGCGGTGCCCGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGGCGGCGCTGCGAAGCTGAGGGAGCT +
Preference number: 1 (lower is better)
Translates to: PRGARPIGGRPCPVA*EVWGGGRRCEAEGA
Trigger: AGCTCCCTCAGCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCGGGCACCGCGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR CCA 90 bp CAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTaGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACCAGGCCC +
Preference number: 1 (lower is better)
Translates to: QMPGSLASGSSPGLY*DGQGREPPARGTRP
Trigger: GGGCCTGGTGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTaGTCCAATCCAGGAGCGGCTGCAGGACCTGAGCCAATGAGACGC +
Preference number: 1 (lower is better)
Translates to: VRPRPTGWALPARAH*SNPGAAAGPEPMRR
Trigger: GCGTCTCATTGGCTCAGGTCCTGCAGCCGCTCCTGGATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPPCPVA*EVWGGG
Trigger: CCCGCCACCCCACACCTCCCACGCTACCGGGCACGG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR GCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCCCGCCAGAGCACACTaGTCCAATCCAGGAGCGGCT +
Preference number: 2 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPPARAH*SNPGAA
Trigger: AGCCGCTCCTGGATTGGAGCAGTGTGCTCTGGCGGG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp ATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCACCGCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: IKKALAKPPPGGAHPGAPPCPVA*EVWGGG
Trigger: CCCGCCACCCCACACCTCCCACGCTACCGGGCACGG...CGGTGCCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
3UTR-3UTR GCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCCCGCTAGCCGCGCGGTaGCCGGCCAATAGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: MRRCLVGALHNSANGEGVPLAAR*PANRRP
Trigger: CGGCCTCCTATTGGCCGGGCACCGCGCGGCTAGCGG...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCCGCTAGCCGCGCGGTaGCCGGCCAATAGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: AARAEVPLAATNEKVALTPLAAR*PANRRP
Trigger: CGGCCTCCTATTGGCCGGGCACCGCGCGGCTAGCGG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp ATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCACCGAGCCCCGGGCTCTATTaGGACGGCCAAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: IKKALAKPPPGGAHPGAPSPGLY*DGQGRE
Trigger: CTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCT...CGGTGCCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
3UTR-3UTR GCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCATAGGAGGCCGCCCGTaGCCGGTAGCGTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: MRRCLVGALHNSANGEGVIGGRP*PVAWEV
Trigger: CACCTCCCACGCTACCGGGCACGGGCGGCCTCCTAT...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCATAGGAGGCCGCCCGTaGCCGGTAGCGTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: AARAEVPLAATNEKVALTIGGRP*PVAWEV
Trigger: CACCTCCCACGCTACCGGGCACGGGCGGCCTCCTAT...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGTGGGAGGTGTGGGGTaGCGGGCGGCGCTGCGAAGC +
Preference number: 2 (lower is better)
Translates to: RAEVPLAATNEKVALTKSVGGVG*RAALRS
Trigger: GCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCAC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCGGGCAGAAGTGCCTCTaGCTGCAACCAATGAGAAGG +
Preference number: 2 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLGQKCL*LQPMRR
Trigger: CCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCC...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR TCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGCGGCGCTGCGAAGCTaGGGGAGCTGCGCGCGGACG +
Preference number: 2 (lower is better)
Translates to: KRRSLSGTLPSLANETLSAALRS*GSCART
Trigger: CGTCCGCGCGCAGCTCCCTCAGCTTCGCAGCGCCGC...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCAACCAAGTCCACTCCTaGCCAGTAAGAGGCGGTCTT +
Preference number: 2 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLNQVHS*PVRGGL
Trigger: AAGACCGCCTCTTACTGGCCAGGAGTGGACTTGGTT...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGTGGGAGGTGTGGGGTaGCGGGCGGCGCTGCGAAGC +
Preference number: 2 (lower is better)
Translates to: KRRSLSGTLPSLANETLSVGGVG*RAALRS
Trigger: GCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCAC...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR TCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCAGGACCTGAGCCAATaGGACGCAACCTCCGCTAGC +
Preference number: 2 (lower is better)
Translates to: AARAEVPLAATNEKVALTQDLSQ*DATSAS
Trigger: GCTAGCGGAGGTTGCGTCTCATTGGCTCAGGTCCTG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR TCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCATCTGGCTGCAACCAATaGGAAGGTAGCCCTAACCAA +
Preference number: 2 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEASGCNQ*EGSPNQ
Trigger: TTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGA...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTCCTCGACCAACGGGATaGGCCCTTCCCGCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: CWGPINTSPQATRVAPGGPRPTG*ALPARA
Trigger: TGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGG...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
3UTR-3UTR TCA 90 bp ATTTTATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGGCCATCAAAACCAGCTaGCAGCTGAGGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: ILLRKLWPSPRREEPILGAIKTS*QLRGLG
Trigger: GCCCAGGCCCCTCAGCTGTCAGCTGGTTTTGATGGC...CCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000622235.5
3UTR-3UTR TCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGAGCGGCTGCAGGACCTaGGCCAATGAGACGCAACCT +
Preference number: 2 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLSGCRT*ANETQP
Trigger: AGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCT...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR TCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTAGCGGCTGCAGGACCTaGGCCAATGAGACGCAACCT +
Preference number: 2 (lower is better)
Translates to: KRRSLSGTLPSLANETLSSGCRT*ANETQP
Trigger: AGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCT...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR CCA 72 bp GCCCGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGGCGGCGCTGCGAAGCT +
Preference number: 3 (lower is better)
Translates to: ARPIGGRPCPVA*EVWGGGRRCEA
Trigger: AGCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR TCA 72 bp GCTCCAATCCAGGAGCGGCTGCAGGACCTGAGCCAATaGGACGCAACCTCCGCTAGCCGCGCGGTGCCCGGC +
Preference number: 3 (lower is better)
Translates to: APIQERLQDLSQ*DATSASRAVPG
Trigger: GCCGGGCACCGCGCGGCTAGCGGAGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCTCCTGGATTGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR CCA 72 bp GGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTaGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: GSLASGSSPGLY*DGQGREPPARG
Trigger: GCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR GCA 72 bp CGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTaGTCCAATCCAGGAGCGGCTGCAGGACCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: RPTGWALPARAH*SNPGAAAGPEP
Trigger: TGGCTCAGGTCCTGCAGCCGCTCCTGGATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR TCA 72 bp AGCACACTGCTCCAATCCAGGAGCGGCTGCAGGACCTaGGCCAATGAGACGCAACCTCCGCTAGCCGCGCGG +
Preference number: 3 (lower is better)
Translates to: STLLQSRSGCRT*ANETQPPLAAR
Trigger: CCGCGCGGCTAGCGGAGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCTCCTGGATTGGAGCAGTGTGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR-3UTR CAA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTGGAACCCTCCCATCTTaGGCCAATGAGACGCTGTCT +
Preference number: 3 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIGTLPS*ANETLS
Trigger: AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCC...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR TCA 72 bp GGCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATaGGAAGGTAGCCCTAACCAAGTCCACTCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: GSPGRSASGCNQ*EGSPNQVHSWP
Trigger: TGGCCAGGAGTGGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR TCA 72 bp GCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATaGGACGCTGTCTGGTCGGAGCGCTCCATAACTCGG +
Preference number: 3 (lower is better)
Translates to: AVFKRNPPIFGQ*DAVWSERSITR
Trigger: CCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGCCTGCGCTCGGGCGATaGCGACAGCGACAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGPALGR*RQRQAP
Trigger: GGGGGCCTGTCGCTGTCGCCATCGCCCGAGCGCAGG...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCGCGGCGCTGCGAAGCTaGGGGAGCTGCGCGCGGACG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGAALRS*GSCART
Trigger: CGTCCGCGCGCAGCTCCCTCAGCTTCGCAGCGCCGC...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGGCTCGCAGGCACACGTaGCGTCCACAGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGARRHT*RPQGGS
Trigger: GCTGCCACCCTGTGGACGGCACGTGTGCCTGCGAGC...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCGGCGCGGCCCAGGCTaGGAGTCTTGCCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPRRGPG*ESCRAA
Trigger: AGCTGCGCGGCAAGACTCGCAGCCTGGGCCGCGCCG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGCACAGTCCGCGCCGTaGAGTCCGGGCGGGCACGTC +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPAQSAP*SPGGHV
Trigger: GACGTGCCCGCCCGGACTCCACGGCGCGGACTGTGC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGCTAGCCGCGCGGTaGCCGGCCAATAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGPLAAR*PANRRP
Trigger: CGGCCTCCTATTGGCCGGGCACCGCGCGGCTAGCGG...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGAGGCAGCGCCCCGACTaGAAGTCGCAGTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGRQRPD*KSQCPL
Trigger: CAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCT...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGCGGCACGGAGCGCTTaGCTTTCTGTGGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPAARSA*LSVGAP
Trigger: CGGCGCCCCCACAGAAAGCCAAGCGCTCCGTGCCGC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGAGATGCCCGGGAGCCTaGCCAGTGGAAGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGRCPGA*PVEVAP
Trigger: CGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCT...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGGTGGCAGGCACCAGTaGCCGGGTCGCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPGGRHQ*PGRTCP
Trigger: AGGACACGTGCGACCCGGTCACTGGTGCCTGCCACC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCGAGGGTTCAGTTCCTaGGGCGCCACGGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPRGFSS*GATVSG
Trigger: GCCGGACACCGTGGCGCCTCAGGAACTGAACCCTCG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCGTACGCTCGCGGCACTaGCAGCGGCCGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLVRSRH*QRPLCC
Trigger: GCAGCAGAGCGGCCGCTGTCAGTGCCGCGAGCGTAC...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGGCGGACAGCGGTGGCTaGAGCCCTCGCCATAGAAAC +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGADSGG*SPRHRN
Trigger: GTTTCTATGGCGAGGGCTGCAGCCACCGCTGTCCGC...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCGTGGACGCCAGGGCTaGACAGGCAGCGCCCCGACT +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLRGRQG*TGSAPT
Trigger: AGTCGGGGCGCTGCCTGTGCAGCCCTGGCGTCCACG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCATAGGAGGCCGCCCGTaGCCGGTAGCGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPIGGRP*PVAWEV
Trigger: CACCTCCCACGCTACCGGGCACGGGCGGCCTCCTAT...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCAGCACAGTCCGCGCCGTaGAGTCCGGGCGGGCACGTC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAAQSAP*SPGGHV
Trigger: GACGTGCCCGCCCGGACTCCACGGCGCGGACTGTGC...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTGCAGGCGCCGGTCTGTaGGTCGCAGCGCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAAGAGL*VAARRG
Trigger: GCCACGTCGCGCTGCGACCCACAGACCGGCGCCTGC...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAPCPVA*EVWGGG
Trigger: CCCGCCACCCCACACCTCCCACGCTACCGGGCACGG...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCGGTGGCAGGCACCAGTaGCCGGGTCGCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGGGRHQ*PGRTCP
Trigger: AGGACACGTGCGACCCGGTCACTGGTGCCTGCCACC...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCATGGCACTGGCACGCATaGTCGCAGCGCGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAWHWHA*SQRAPQ
Trigger: CTGGGGCGCGCGCTGCGAGCATGCGTGCCAGTGCCA...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGACATGGTTACAGGCATaGCCGTCGCGGCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGTWLQA*PSRHGG
Trigger: TCCGCCATGCCGCGACGGGCATGCCTGTAACCATGT...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGGGGCGCACGGCCAGCTaGAGCGGCGCTGTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLGRTAS*SGAVLA
Trigger: GGCAAGCACAGCGCCGCTGCAGCTGGCCGTGCGCCC...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACGCGGGTCCGGGGGCTaGCGTGTTCGACCGTATGCG +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEARGSGG*RVRPYA
Trigger: CGCATACGGTCGAACACGGCAGCCCCCGGACCCGCG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGCCGCTAGCCGCGCGGTaGCCGGCCAATAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLPLAAR*PANRRP
Trigger: CGGCCTCCTATTGGCCGGGCACCGCGCGGCTAGCGG...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGCGGGCCCCTCCACGCTaGACGCCGACCGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLRAPPR*TPTARC
Trigger: ACAGCGAGCGGTCGGCGTCCAGCGTGGAGGGGCCCG...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACAGCACGTGGGCACCTaGGAGCCGGGAGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAQHVGT*EPGARH
Trigger: GTGCCGTGCTCCCGGCTCCCAGGTGCCCACGTGCTG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTAGCCAGCGCAGCACGTaGGCACCTGGGAGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTASQRST*APGSRE
Trigger: CTCCCGGCTCCCAGGTGCCCACGTGCTGCGCTGGCT...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCATGCAGTAGCACGCGCTaGCGCACTGCGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEACSSTR*RTARPT
Trigger: GGTGGGGCGCGCAGTGCGCCAGCGCGTGCTACTGCA...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTTGCAGTAGCACGCGCTaGCGCACTGCGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTACSSTR*RTARPT
Trigger: GGTGGGGCGCGCAGTGCGCCAGCGCGTGCTACTGCA...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTGGTCGCAGCGCGACGTaGCGCTGCAGTAGCACGCGC +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAGRSAT*RCSSTR
Trigger: GCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACC...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTGTGCCGTCCACAGGGTaGCAGCGGCCGCGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAVPSTG*QRPRKH
Trigger: GTGCTTCCGCGGCCGCTGCCACCCTGTGGACGGCAC...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCTCCGTTTCCTCTTGCTaGGGCTGGGCGCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGSVSSC*GWARPR
Trigger: CCGAGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGA...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCAGCTCAGCGGCCAACATaGAGGCAGCCTCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAAQRPT*RQPRAR
Trigger: GCGCGCCCGAGGCTGCCTCCATGTTGGCCGCTGAGC...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCAGCCTGCTACAGGGTaGGTGCGCCCGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAQPATG*VRPPCP
Trigger: TGGGCAGGGCGGGCGCACCCACCCTGTAGCAGGCTG...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGGTGGGAGGTGTGGGGTaGCGGGCGGCGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLVGGVG*RAALRS
Trigger: GCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCAC...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGTGGCAGCTGCAGGCCTaGGCACAGTCCGCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQWQLQA*AQSAPW
Trigger: CCACGGCGCGGACTGTGCTCAGGCCTGCAGCTGCCA...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGACTTTGGGTAGTTTCTaGCTCCGGAGCGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGTLGSF*LRSGIR
Trigger: CCGGATCCCGCTCCGGAGGCAGAAACTACCCAAAGT...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCACTCGTCCCCTTGCTaGCTCCAGCCAGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLHSSPC*LQPAQH
Trigger: GTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGTGGCACTGGCACGCATaGTCGCAGCGCGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQWHWHA*SQRAPQ
Trigger: CTGGGGCGCGCGCTGCGAGCATGCGTGCCAGTGCCA...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGAGCGCGACGTGGCGCTaGAGTAGCACGCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLSATWR*SSTRWR
Trigger: GCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCT...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCAGCGGCGCTGTGCTTaGCGTGGATCCAGGACACCT +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPQRRCA*RGSRTP
Trigger: AGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACCAGGCTGCGAGTCTTaGCGCGCAGCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAPGCES*RAAQRP
Trigger: TGGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCCGGCGCGGCCCAGGCTaGGAGTCTTGCCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLRRGPG*ESCRAA
Trigger: AGCTGCGCGGCAAGACTCGCAGCCTGGGCCGCGCCG...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGAGCCAGCGCAGCACGTaGGCACCTGGGAGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLSQRST*APGSRE
Trigger: CTCCCGGCTCCCAGGTGCCCACGTGCTGCGCTGGCT...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCATCGGGGCCCCAGAACTaGCGCGGGCACTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEASGPQN*RGHLVS
Trigger: CGACACCAAGTGCCCGCGCCAGTTCTGGGGCCCCGA...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCCCTGCGCTCGGGCGATaGCGACAGCGACAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLPALGR*RQRQAP
Trigger: GGGGGCCTGTCGCTGTCGCCATCGCCCGAGCGCAGG...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGGTGGCGGGGTCAGGTaGCGGCGGTTTCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQGGGVR*RRFPAL
Trigger: GAGCGCAGGAAACCGCCGCCACCTGACCCCGCCACC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGTCCTCTTGCTGGGGCTaGGCGCGGCCTCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQSSCWG*ARPRSL
Trigger: CAGGCTCCGAGGCCGCGCCCAGCCCCAGCAAGAGGA...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGGCGGCACGGAGCGCTTaGCTTTCTGTGGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLAARSA*LSVGAP
Trigger: CGGCGCCCCCACAGAAAGCCAAGCGCTCCGTGCCGC...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCAGATGCCCGGGAGCCTaGCCAGTGGAAGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLRCPGA*PVEVAP
Trigger: CGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCT...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCGTACGCTCGCGGCACTaGCAGCGGCCGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIVRSRH*QRPLCC
Trigger: GCAGCAGAGCGGCCGCTGTCAGTGCCGCGAGCGTAC...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCAGCGGCTGCAGGACCTaGGCCAATGAGACGCAACCT +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPSGCRT*ANETQP
Trigger: AGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCT...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCTGTCCTCGTGGCAGCTaGAGGCCTGAGCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGCPRGS*RPEHSP
Trigger: CGGACTGTGCTCAGGCCTGCAGCTGCCACGAGGACA...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACAGGATGGTGAGGGCTaGTCCAGCCCTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAQDGEG*SSPEGG
Trigger: GCCACCCTCAGGGCTGGAGCAGCCCTCACCATCCTG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCGAGCACGGCACACGTTaGGGCCGCGAGGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLEHGTR*GREGSV
Trigger: AACTGAACCCTCGCGGCCGCAACGTGTGCCGTGCTC...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCACACTCGTCCCCTTaGTGCCTCCAGCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAPHSSP*CLQPAQ
Trigger: CTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGG...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp ATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCACCGAGCGCGACGTGGCGCTaGAGTAGCACGCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: IKKALAKPPPGGAHPGAPSATWR*SSTRWR
Trigger: GCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCT...CGGTGCCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATACGGCTGCTGGCCCTTaGACTGGCCACACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNTAAGP*TGHTGG
Trigger: GCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATGTGGCGGCGGTTTCCTaGGCTCGGGCGATGGCGACA +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYVAAVS*ARAMAT
Trigger: TGTCGCCATCGCCCGAGCGCAGGAAACCGCCGCCAC...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGCGTCCGTTTCCTCTTaGTGGGGCTGGGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQASVSS*WGWARP
Trigger: AGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCGCGGGTCCGGGGGCTaGCGTGTTCGACCGTATGCG +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIRGSGG*RVRPYA
Trigger: CGCATACGGTCGAACACGGCAGCCCCCGGACCCGCG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCTGCTACAGGGTGGGTaGGCCCGCCCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSILLQGG*ARPAQL
Trigger: GAGCTGGGCAGGGCGGGCGCACCCACCCTGTAGCAG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACTGGGGTCAACCAGATaGCCGGGAGCCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEALGSTR*PGAWPV
Trigger: CACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCAGCACGTGGGCACCTaGGAGCCGGGAGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIQHVGT*EPGARH
Trigger: GTGCCGTGCTCCCGGCTCCCAGGTGCCCACGTGCTG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGTCGGGGCCCCAGAACTaGCGCGGGCACTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQSGPQN*RGHLVS
Trigger: CGACACCAAGTGCCCGCGCCAGTTCTGGGGCCCCGA...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATGTGCCGTGCTGGCACTaGCACGCATGCTCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYVPCWH*HACSQR
Trigger: GCGCTGCGAGCATGCGTGCCAGTGCCAGCACGGCAC...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTGTGCCGTCCACAGGGTaGCAGCGGCCGCGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIVPSTG*QRPRKH
Trigger: GTGCTTCCGCGGCCGCTGCCACCCTGTGGACGGCAC...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCAACCGTGCACGGCTGCTaGCCCTTGCACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEATVHGC*PLHWPH
Trigger: GTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGT...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTTTACAGTGGGGCCCGTaGACGCCAGGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTALQWGP*TPGLHR
Trigger: CCTGTGCAGCCCTGGCGTCCACGGGCCCCACTGTAA...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCGAGGGTTCAGTTCCTaGGGCGCCACGGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIRGFSS*GATVSG
Trigger: GCCGGACACCGTGGCGCCTCAGGAACTGAACCCTCG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCCCCAGCGCCGCGCGTaGCAAGTACACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIPQRRA*QVHWPV
Trigger: GACAGGCCAGTGTACTTGTCACGCGCGGCGCTGGGG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGCGTACACTTGCCGGTaGCATGGTTACAGGCATGCC +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPAYTCR*HGYRHA
Trigger: GGCATGCCTGTAACCATGTCACCGGCAAGTGTACGC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGGACGGACTAAGCCCCTaGGGAGCGGAGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLDGLSP*GAETSP
Trigger: AGGGCTGGTCTCCGCTCCTCAGGGGCTTAGTCCGTC...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATCACTCGTCCCCTTGCTaGCTCCAGCCAGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYHSSPC*LQPAQH
Trigger: GTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTG...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCTGAGCACGTGGAGTTaGCTTCGCACACCGCAATCC +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPLSTWS*LRTPQS
Trigger: GGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATCAGCGGCCGCTCTGCTaGTCGCAGGGAGACGAGTTG +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYQRPLC*SQGDEL
Trigger: CAACTCGTCTCCCTGCGAGCAGCAGAGCGGCCGCTG...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCGCTCGCAGGCACACGTaGCGTCCACAGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIARRHT*RPQGGS
Trigger: GCTGCCACCCTGTGGACGGCACGTGTGCCTGCGAGC...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGAGTCGCAGTGTCCGCTaGCGCAGTCGGCGCACACGA +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLSRSVR*RSRRTR
Trigger: TCGTGTGCGCCGACTGCGGCAGCGGACACTGCGACT...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATATAGGAGGCCGCCCGTaGCCGGTAGCGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNIGGRP*PVAWEV
Trigger: CACCTCCCACGCTACCGGGCACGGGCGGCCTCCTAT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGCTGGGGTCAACCAGATaGCCGGGAGCCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLLGSTR*PGAWPV
Trigger: CACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAG...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGCTGGTGCCTCCTCATaGGGTACACAGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPAGASS*GTQYTG
Trigger: CCCTGTGTACTGTGTACCCCATGAGGAGGCACCAGC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCTCCTCGGCGGAGGCTaGCGTGGTCAAGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSILLGGG*RGQGHR
Trigger: CCTGTGCCCTTGACCACGCCAGCCTCCGCCGAGGAG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCACTTGGTGTCGCAGTTaGCACCGAAGTAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPTWCRS*HRSSRG
Trigger: GCCACGGCTACTTCGGTGCCAACTGCGACACCAAGT...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTACTGGCGCGGGCACTTaGTGTCGCAGTTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTATGAGT*CRSWHR
Trigger: TCGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGT...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCACTGCCCGTGTGGGTaGCAGCTACACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGHCPCG*QLHSSL
Trigger: CAAGGAGCTGTGTAGCTGCCACCCACACGGGCAGTG...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCTCGCACTGCCCGTGTaGGTGGCAGCTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTALALPV*VAATQL
Trigger: GAGCTGTGTAGCTGCCACCCACACGGGCAGTGCGAG...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTGGCACGTGCCGTGCTaGCACTGGCACGCATGCTCG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLWHVPC*HWHACS
Trigger: CGAGCATGCGTGCCAGTGCCAGCACGGCACGTGCCA...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCGCAGGCGCCGGTCTGTaGGTCGCAGCGCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTAGAGL*VAARRG
Trigger: GCCACGTCGCGCTGCGACCCACAGACCGGCGCCTGC...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACCGGTGGCGCAAGGCTaGTCGCACTTGGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAPVAQG*SHLVPF
Trigger: GAACGGAACCAAGTGCGACCAGCCTTGCGCCACCGG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCGCCATAGAAACCGGTaGCGCAAGGCTGGTCGCACT +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLRHRNR*RKAGRT
Trigger: AGTGCGACCAGCCTTGCGCCACCGGTTTCTATGGCG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCACTTGCCGGTGACATaGTTACAGGCATGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPHLPVT*LQACPS
Trigger: CGACGGGCATGCCTGTAACCATGTCACCGGCAAGTG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATTCCGTTTCCTCTTGCTaGGGCTGGGCGCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNSVSSC*GWARPR
Trigger: CCGAGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGA...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTGCGCTTGGCTTTCTGTaGGGGCGCCGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAALGFL*GRRLFP
Trigger: AGGGAAAAGCCGGCGCCCCCACAGAAAGCCAAGCGC...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCCCGTGCCCGGTAGCGTaGGAGGTGTGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVPCPVA*EVWGGG
Trigger: CCCGCCACCCCACACCTCCCACGCTACCGGGCACGG...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGCCTCGACCAACGGGATaGGCCCTTCCCGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLPRPTG*ALPARA
Trigger: TGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGG...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACGGCGTGTGGGGCAGTaGGAGGCCATCAAAACCAGC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEARRVGQ*EAIKTS
Trigger: GCTGGTTTTGATGGCCTCCCACTGCCCCACACGCCG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATAGGTCCCGCGGCGTGTaGGGCAGTGGGAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNRSRGV*GSGRPS
Trigger: TGATGGCCTCCCACTGCCCCACACGCCGCGGGACCT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR TCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCGCACACCTCGTTCTCTaGGCACGTGGAGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLAHLVL*ARGVAF
Trigger: GAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGC...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGCGGCGCTGCGAAGCTaGGGGAGCTGCGCGCGGACG +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSAALRS*GSCART
Trigger: CGTCCGCGCGCAGCTCCCTCAGCTTCGCAGCGCCGC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCGCCCGCATAGTCGGTaGGGCGCCTTCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNRPHSR*GAFFLP
Trigger: TGGGAGGAAGAAGGCGCCGCACCGACTATGCGGGCG...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCTGAGCACGTGGAGTTaGCTTCGCACACCGCAATCC +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLLSTWS*LRTPQS
Trigger: GGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGACTGGTTGTTGCAGCTaGGGCCCCACCAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLTGCCS*GPTSLR
Trigger: ACGCAGGCTGGTGGGGCCGCAGCTGCAACAACCAGT...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACGCAGGGAGACGAGTTaGAGGCGCACTGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEARRETS*RRTGCC
Trigger: GCAACAACCAGTGCGCCTGCAACTCGTCTCCCTGCG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCACGGCTGCTGGCCCTTaGACTGGCCACACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVTAAGP*TGHTGG
Trigger: GCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGT...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCGATCCAGCCCGCGTTaGAGCGCGTACACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIRSSPR*SAYTCR
Trigger: CCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATAGTCGCAGTGTCCGCTaGCGCAGTCGGCGCACACGA +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNSRSVR*RSRRTR
Trigger: TCGTGTGCGCCGACTGCGGCAGCGGACACTGCGACT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCCTCCCGGCTCTTCTTaGGCGGCGGCTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIPPGSS*AAASGW
Trigger: CCATCCAGAAGCCGCCGCGCAAGAAGAGCCGGGAGG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCCTCCCGGCTCTTCTTaGGCGGCGGCTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIPPGSS*AAASGW
Trigger: CCATCCAGAAGCCGCCGCGCAAGAAGAGCCGGGAGG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCTGGTTGGTTTCTAGGTaGCAGGCACCAGTGACCGGG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLSACQASTNGMGWLVSR*QAPVTG
Trigger: CCCGGTCACTGGTGCCTGCCACCTAGAAACCAACCA...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTGTCCCGGCTCTCCGCTaGTGCCTCCTCATGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIVPALR*CLLMGY
Trigger: GTACCCCATGAGGAGGCACCAGCGGAGAGCCGGGAC...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTTGGCACGTGCCGTGCTaGCACTGGCACGCATGCTCG +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIWHVPC*HWHACS
Trigger: CGAGCATGCGTGCCAGTGCCAGCACGGCACGTGCCA...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGAGTTGCAGGCGCACTaGTTGTTGCAGCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQELQAH*LLQLRP
Trigger: GGGCCGCAGCTGCAACAACCAGTGCGCCTGCAACTC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCGGTGGCGCAAGGCTaGTCGCACTTGGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQPVAQG*SHLVPF
Trigger: GAACGGAACCAAGTGCGACCAGCCTTGCGCCACCGG...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATAGGCAGCGCCCCGACTaGAAGTCGCAGTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNRQRPD*KSQCPL
Trigger: CAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCTCCTCTTGCTGGGGCTaGGCGCGGCCTCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVSSCWG*ARPRSL
Trigger: CAGGCTCCGAGGCCGCGCCCAGCCCCAGCAAGAGGA...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCCCTCGACCAACGGGATaGGCCCTTCCCGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLPRPTG*ALPARA
Trigger: TGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGG...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCGGCTCTCCGCTGGTaGCTCCTCATGGGGTACACA +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNPALRW*LLMGYT
Trigger: TGTGTACCCCATGAGGAGGCACCAGCGGAGAGCCGG...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCGTCACGTCCTCGCACTaGCCGTGTGGGTGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIVTSSH*PCGWQL
Trigger: TAGCTGCCACCCACACGGGCAGTGCGAGGACGTGAC...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATACTGGTTGTTGCAGCTaGGGCCCCACCAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNTGCCS*GPTSLR
Trigger: ACGCAGGCTGGTGGGGCCGCAGCTGCAACAACCAGT...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCGCTCGCGACAGTACTTaGCGCGGTAGCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTARDST*RGSPAR
Trigger: GCGAGCCGGGCTACCGCGGCAAGTACTGTCGCGAGC...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTGGGCGCACGGCCAGCTaGAGCGGCGCTGTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGGRTAS*SGAVLA
Trigger: GGCAAGCACAGCGCCGCTGCAGCTGGCCGTGCGCCC...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp TCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGCAGCCCGGGCAGAAGTaGCTCTGGCTGCAACCAATG +
Preference number: 4 (lower is better)
Translates to: SERSITRPMGRESPAKRLQPGQK*LWLQPM
Trigger: CATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTG...CAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTTGGTTGGTTTCTAGGTaGCAGGCACCAGTGACCGGG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAWLVSR*QAPVTG
Trigger: CCCGGTCACTGGTGCCTGCCACCTAGAAACCAACCA...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCTCCTCGGCGGAGGCTaGCGTGGTCAAGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTLLGGG*RGQGHR
Trigger: CCTGTGCCCTTGACCACGCCAGCCTCCGCCGAGGAG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACGTTCTCTGAGCACGTaGAGTTGCCTTCGCACACCG +
Preference number: 4 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEARSLST*SCLRTP
Trigger: CGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCGTTCTCTGAGCACGTaGAGTTGCCTTCGCACACCG +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTARSLST*SCLRTP
Trigger: CGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACG...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCGCCATAGAAACCGGTaGCGCAAGGCTGGTCGCACT +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQRHRNR*RKAGRT
Trigger: AGTGCGACCAGCCTTGCGCCACCGGTTTCTATGGCG...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCATGCCCGTCGCGGCATaGCGGACAGCGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTMPVAA*RTAVAA
Trigger: TGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCAT...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATGCGCCGATTTGTCGCTaGGCGTCCGTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYAPICR*ASVSSC
Trigger: GCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGC...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGCACACCTCGTTCTCTaGGCACGTGGAGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQAHLVL*ARGVAF
Trigger: GAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATGCGTACACTTGCCGGTaGCATGGTTACAGGCATGCC +
Preference number: 4 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYAYTCR*HGYRHA
Trigger: GGCATGCCTGTAACCATGTCACCGGCAAGTGTACGC...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCCACACTCGTCCCCTTaGTGCCTCCAGCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTPHSSP*CLQPAQ
Trigger: CTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTTCCGCGGGTGGCACGTaGCGTGCTGGCACTGGCACG +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGSAGGT*RAGTGT
Trigger: CGTGCCAGTGCCAGCACGGCACGTGCCACCCGCGGA...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCTCCGCGGGTGGCACGTaGCGTGCTGGCACTGGCACG +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSSAGGT*RAGTGT
Trigger: CGTGCCAGTGCCAGCACGGCACGTGCCACCCGCGGA...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCAGCGGCCGCTCTGCTaGTCGCAGGGAGACGAGTTG +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTQRPLC*SQGDEL
Trigger: CAACTCGTCTCCCTGCGAGCAGCAGAGCGGCCGCTG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTCGTGGACGCCAGGGCTaGACAGGCAGCGCCCCGACT +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGRGRQG*TGSAPT
Trigger: AGTCGGGGCGCTGCCTGTGCAGCCCTGGCGTCCACG...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCCGTGTTCGACCGTATaGGCCGATTTGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIPCSTV*ADLSLG
Trigger: GCCCAGCGACAAATCGGCGCATACGGTCGAACACGG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCAGCCCGGGCAGAAGTaGCTCTGGCTGCAACCAATG +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIQPGQK*LWLQPM
Trigger: CATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCAGGGCCTTCATCAGTaGTGTCAAACGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLQGLHQ*CQTRRR
Trigger: CCTTCTCCTCGTTTGACACCACTGATGAAGGCCCTG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCGCGCTGTGCTTGCCGTaGATCCAGGACACCTTAGGC +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIALCLP*IQDTLG
Trigger: GCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGC...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTGCGCCGATTTGTCGCTaGGCGTCCGTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIAPICR*ASVSSC
Trigger: GCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGC...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGTGGGAGGTGTGGGGTaGCGGGCGGCGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETVGGVG*RAALRS
Trigger: GCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCAC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAGCCCCGGGCTCTATTaGGACGGCCAAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTSPGLY*DGQGRE
Trigger: CTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCT...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTGGGGAGCAGCCCTGCTaGGGGCCTATAAATACATCT +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTAGEQPC*GPINTS
Trigger: AGATGTATTTATAGGCCCCCAGCAGGGCTGCTCCCC...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR TCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGTGGCAGCTGCAGGCCTaGGCACAGTCCGCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLWQLQA*AQSAPW
Trigger: CCACGGCGCGGACTGTGCTCAGGCCTGCAGCTGCCA...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCCCATCTTTGGCCAATaGGACGCTGTCTGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIPIFGQ*DAVWSE
Trigger: CTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCAGCTACACAGCTCCTTaGAGTCGGGGCCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLSYTAP*SRGPRT
Trigger: AGTTCTGGGGCCCCGACTGCAAGGAGCTGTGTAGCT...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGGGTGGCACGTGCCGTaGTGGCACTGGCACGCATGC +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSGWHVP*WHWHAC
Trigger: GCATGCGTGCCAGTGCCAGCACGGCACGTGCCACCC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACGGGTGGCACGTGCCGTaGTGGCACTGGCACGCATGC +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNGWHVP*WHWHAC
Trigger: GCATGCGTGCCAGTGCCAGCACGGCACGTGCCACCC...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCGCCGTAAGTGCCATTaGTACACTTGGTCTCGCACC +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQRRKCH*YTWSRT
Trigger: GGTGCGAGACCAAGTGTAGCAATGGCACTTACGGCG...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCCAGCGGCGCTGTGCTTaGCGTGGATCCAGGACACCT +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVQRRCA*RGSRTP
Trigger: AGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTG...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTGCGTCCGTTTCCTCTTaGTGGGGCTGGGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGASVSS*WGWARP
Trigger: AGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGC...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATGCTGGTGCCTCCTCATaGGGTACACAGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNAGASS*GTQYTG
Trigger: CCCTGTGTACTGTGTACCCCATGAGGAGGCACCAGC...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTCGGGCCCCTCCACGCTaGACGCCGACCGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KRRSLSGTLPSLANETLSRAPPR*TPTARC
Trigger: ACAGCGAGCGGTCGGCGTCCAGCGTGGAGGGGCCCG...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCACTGGCGCGGGCACTTaGTGTCGCAGTTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTTGAGT*CRSWHR
Trigger: TCGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGT...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGTGCCGTGCTGGCACTaGCACGCATGCTCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSVPCWH*HACSQR
Trigger: GCGCTGCGAGCATGCGTGCCAGTGCCAGCACGGCAC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGGTCGCAGCGCGACGTaGCGCTGCAGTAGCACGCGC +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLGRSAT*RCSSTR
Trigger: GCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACC...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACATGCCCGTCGCGGCATaGCGGACAGCGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNMPVAA*RTAVAA
Trigger: TGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCAT...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCACCGTGCCATTGCTACACTTaGTCTCGCACCGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: IKKALAKPPPGGAHPGAPCHCYT*SRTGRR
Trigger: TCGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCA...CGGTGCCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGGTGGCGGGGTCAGGTaGCGGCGGTTTCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLGGGVR*RRFPAL
Trigger: GAGCGCAGGAAACCGCCGCCACCTGACCCCGCCACC...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGCTCAGCGGCCAACATaGAGGCAGCCTCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETAQRPT*RQPRAR
Trigger: GCGCGCCCGAGGCTGCCTCCATGTTGGCCGCTGAGC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGCAGCCTGCTACAGGGTaGGTGCGCCCGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLQPATG*VRPPCP
Trigger: TGGGCAGGGCGGGCGCACCCACCCTGTAGCAGGCTG...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTAACCAAGTCCACTCCTaGCCAGTAAGAGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTANQVHS*PVRGGL
Trigger: AAGACCGCCTCTTACTGGCCAGGAGTGGACTTGGTT...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGGGCAGAAGTGCCTCTaGCTGCAACCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQGQKCL*LQPMRR
Trigger: CCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCCCCAGCGCCGCGCGTaGCAAGTACACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETPQRRA*QVHWPV
Trigger: GACAGGCCAGTGTACTTGTCACGCGCGGCGCTGGGG...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCCAGGACCTGAGCCAATaGGACGCAACCTCCGCTAGC +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVQDLSQ*DATSAS
Trigger: GCTAGCGGAGGTTGCGTCTCATTGGCTCAGGTCCTG...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCAGCGGCTGCAGGACCTaGGCCAATGAGACGCAACCT +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVSGCRT*ANETQP
Trigger: AGGTTGCGTCTCATTGGCTCAGGTCCTGCAGCCGCT...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGACGGACTAAGCCCCTaGGGAGCGGAGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSDGLSP*GAETSP
Trigger: AGGGCTGGTCTCCGCTCCTCAGGGGCTTAGTCCGTC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTAAACCAGCTGACAGCTaGGGGGCCTGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRRSLSGTLPSLANETLSKPADS*GAWARG
Trigger: GCCCCGGGCCCAGGCCCCTCAGCTGTCAGCTGGTTT...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp ATTTTATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCAGGATGGTGAGGGCTaGTCCAGCCCTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILLRKLWPSPRREEPILGQDGEG*SSPEGG
Trigger: GCCACCCTCAGGGCTGGAGCAGCCCTCACCATCCTG...CCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGCTCGCGACAGTACTTaGCGCGGTAGCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETARDST*RGSPAR
Trigger: GCGAGCCGGGCTACCGCGGCAAGTACTGTCGCGAGC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGTGGCGGCGGTTTCCTaGGCTCGGGCGATGGCGACA +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLVAAVS*ARAMAT
Trigger: TGTCGCCATCGCCCGAGCGCAGGAAACCGCCGCCAC...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACGCTGCAGCGGCGCTGTaGTTGCCGTGGATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNAAAAL*LPWIQD
Trigger: GTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGC...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGCCAGGCTGCGAGTCTTaGCGCGCAGCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLPGCES*RAAQRP
Trigger: TGGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGG...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGCTGCTACAGGGTGGGTaGGCCCGCCCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLLLQGG*ARPAQL
Trigger: GAGCTGGGCAGGGCGGGCGCACCCACCCTGTAGCAG...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCATCACGCCCTTGCGCTaGTTGGTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIITPLR*LVSRWQ
Trigger: CTGCCACCTAGAAACCAACCAGCGCAAGGGCGTGAT...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTGGGCCACTACGACTTTaGGTAGTTTCTGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIGPLRL*VVSASG
Trigger: TCCGGAGGCAGAAACTACCCAAAGTCGTAGTGGCCC...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCCACTGCCCGTGTGGGTaGCAGCTACACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVHCPCG*QLHSSL
Trigger: CAAGGAGCTGTGTAGCTGCCACCCACACGGGCAGTG...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTTACAGTGGGGCCCGTaGACGCCAGGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNLQWGP*TPGLHR
Trigger: CCTGTGCAGCCCTGGCGTCCACGGGCCCCACTGTAA...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACCACGTCACGTTACAGTaGGGCCCGTGGACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNHVTLQ*GPWTPG
Trigger: CCCTGGCGTCCACGGGCCCCACTGTAACGTGACGTG...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCGCGCTGTGCTTGCCGTaGATCCAGGACACCTTAGGC +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTALCLP*IQDTLG
Trigger: GCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGC...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTAGCCCCGGGCTCTATTaGGACGGCCAAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGSPGLY*DGQGRE
Trigger: CTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCT...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR TCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCCAGGAAGCTGCAGTTaGGTGTGTTATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPIPGSCS*VCYPGR
Trigger: ACGACCTGGATAACACACTCAACTGCAGCTTCCTGG...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTGTCCTCGTGGCAGCTaGAGGCCTGAGCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNCPRGS*RPEHSP
Trigger: CGGACTGTGCTCAGGCCTGCAGCTGCCACGAGGACA...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGAGCACGGCACACGTTaGGGCCGCGAGGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSEHGTR*GREGSV
Trigger: AACTGAACCCTCGCGGCCGCAACGTGTGCCGTGCTC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGAGGCGCACTGGTTGTTaGAGCTGCGGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLRRTGC*SCGPTS
Trigger: GCTGGTGGGGCCGCAGCTGCAACAACCAGTGCGCCT...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTGCGGACAGCGGTGGCTaGAGCCCTCGCCATAGAAAC +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGADSGG*SPRHRN
Trigger: GTTTCTATGGCGAGGGCTGCAGCCACCGCTGTCCGC...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR GCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGCGATCCAGCCCGCGTTaGAGCGCGTACACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLRSSPR*SAYTCR
Trigger: CCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCG...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTCCCGCCAGAGCACACTaGTCCAATCCAGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGPARAH*SNPGAA
Trigger: AGCCGCTCCTGGATTGGAGCAGTGTGCTCTGGCGGG...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp TCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCTTATCCAGGTCGTGGTaGGCCACTACGACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SGLDQRDGPFPPEHTAPILSRSW*ATTTLG
Trigger: ACCCAAAGTCGTAGTGGCCCACCACGACCTGGATAA...GATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATTTATCCAGGTCGTGGTaGGCCACTACGACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNLSRSW*ATTTLG
Trigger: ACCCAAAGTCGTAGTGGCCCACCACGACCTGGATAA...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGTGTTATCCAGGTCGTaGTGGGCCACTACGACTTTG +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLVLSRS*WATTTL
Trigger: CAAAGTCGTAGTGGCCCACCACGACCTGGATAACAC...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCCAGGGCCTTCATCAGTaGTGTCAAACGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLQGLHQ*CQTRRR
Trigger: CCTTCTCCTCGTTTGACACCACTGATGAAGGCCCTG...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCACTTGGTGTCGCAGTTaGCACCGAAGTAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: MRRCLVGALHNSANGEGVTWCRS*HRSSRG
Trigger: GCCACGGCTACTTCGGTGCCAACTGCGACACCAAGT...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTCTCGCACTGCCCGTGTaGGTGGCAGCTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: CWGPINTSPQATRVAPGGLALPV*VAATQL
Trigger: GAGCTGTGTAGCTGCCACCCACACGGGCAGTGCGAG...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGACCGTGCACGGCTGCTaGCCCTTGCACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLTVHGC*PLHWPH
Trigger: GTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGT...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGCACGTCACGTTACAGTaGGGCCCGTGGACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLHVTLQ*GPWTPG
Trigger: CCCTGGCGTCCACGGGCCCCACTGTAACGTGACGTG...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATTTTATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGTTGCGCGGCGGCTTCTaGATGGGGGTCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ILLRKLWPSPRREEPILGLRGGF*MGVFFR
Trigger: CCGGAAGAAGACCCCCATCCAGAAGCCGCCGCGCAA...CCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATGAACCCTCCCATCTTTaGCCAATGAGACGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNEPSHL*PMRRCL
Trigger: CAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTAACCAAGTCCACTCCTaGCCAGTAAGAGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSINQVHS*PVRGGL
Trigger: AAGACCGCCTCTTACTGGCCAGGAGTGGACTTGGTT...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCACCGTTATTAAGAAAGCTTTaGCCAAGCCCCCGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: IKKALAKPPPGGAHPGAPLLRKL*PSPRRE
Trigger: CTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAA...CGGTGCCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR TCA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATTCTGGCTGCAACCAATaGGAAGGTAGCCCTAACCAA +
Preference number: 4 (lower is better)
Translates to: VRPRPTGWALPARAHCSNSGCNQ*EGSPNQ
Trigger: TTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGA...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGCCGGCTCTCCGCTGGTaGCTCCTCATGGGGTACACA +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLPALRW*LLMGYT
Trigger: TGTGTACCCCATGAGGAGGCACCAGCGGAGAGCCGG...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTAGGCGCACTGGTTGTTaGAGCTGCGGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KRRSLSGTLPSLANETLSRRTGC*SCGPTS
Trigger: GCTGGTGGGGCCGCAGCTGCAACAACCAGTGCGCCT...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCCGCAGGGAGACGAGTTaGAGGCGCACTGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSRRETS*RRTGCC
Trigger: GCAACAACCAGTGCGCCTGCAACTCGTCTCCCTGCG...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACACATGGTTACAGGCATaGCCGTCGCGGCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNTWLQA*PSRHGG
Trigger: TCCGCCATGCCGCGACGGGCATGCCTGTAACCATGT...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp TCCATAACTCGGCCAATGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCAGTCCTCGCCGTAAGTaGCATTGCTACACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SITRPMGRESPAKRLSGLSPRRK*HCYTWS
Trigger: AGACCAAGTGTAGCAATGGCACTTACGGCGAGGACT...GAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCATTGGCCGAGTTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGGCTGCAGCGGCGCTGTaGTTGCCGTGGATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLAAAAL*LPWIQD
Trigger: GTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGC...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCCCGTGTTCGACCGTATaGGCCGATTTGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSPCSTV*ADLSLG
Trigger: GCCCAGCGACAAATCGGCGCATACGGTCGAACACGG...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp ATTTTATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGCGCCCTTGCGCTGGTTaGTTTCTAGGTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ILLRKLWPSPRREEPILGRPCAG*FLGGRH
Trigger: GTGCCTGCCACCTAGAAACCAACCAGCGCAAGGGCG...CCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGGTCCCGGCTCTCCGCTaGTGCCTCCTCATGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLVPALR*CLLMGY
Trigger: GTACCCCATGAGGAGGCACCAGCGGAGAGCCGGGAC...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGAGTTGCAGGCGCACTaGTTGTTGCAGCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETELQAH*LLQLRP
Trigger: GGGCCGCAGCTGCAACAACCAGTGCGCCTGCAACTC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCAGGACCTGAGCCAATaGGACGCAACCTCCGCTAGC +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETQDLSQ*DATSAS
Trigger: GCTAGCGGAGGTTGCGTCTCATTGGCTCAGGTCCTG...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCCCCATCTTTGGCCAATaGGACGCTGTCTGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSPIFGQ*DAVWSE
Trigger: CTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGG...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCCGCCCATCACGCCCTTaGGCTGGTTGGTTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSRPSRP*AGWFLG
Trigger: ACCTAGAAACCAACCAGCGCAAGGGCGTGATGGGCG...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGGTCACGTCCTCGCACTaGCCGTGTGGGTGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLVTSSH*PCGWQL
Trigger: TAGCTGCCACCCACACGGGCAGTGCGAGGACGTGAC...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTCCCGCCAGAGCACACTaGTCCAATCCAGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: KRRSLSGTLPSLANETLSPARAH*SNPGAA
Trigger: AGCCGCTCCTGGATTGGAGCAGTGTGCTCTGGCGGG...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTGCCATTGCTACACTTaGTCTCGCACCGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNCHCYT*SRTGRR
Trigger: TCGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCA...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGGCGCTTGGCTTTCTGTaGGGGCGCCGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLALGFL*GRRLFP
Trigger: AGGGAAAAGCCGGCGCCCCCACAGAAAGCCAAGCGC...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTTGCGCGGCGGCTTCTaGATGGGGGTCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLLRGGF*MGVFFR
Trigger: CCGGAAGAAGACCCCCATCCAGAAGCCGCCGCGCAA...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGAGCTACACAGCTCCTTaGAGTCGGGGCCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETSYTAP*SRGPRT
Trigger: AGTTCTGGGGCCCCGACTGCAAGGAGCTGTGTAGCT...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAGTCCTCGCCGTAAGTaGCATTGCTACACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: AARAEVPLAATNEKVALTSPRRK*HCYTWS
Trigger: AGACCAAGTGTAGCAATGGCACTTACGGCGAGGACT...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCACTTGCCGGTGACATaGTTACAGGCATGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETHLPVT*LQACPS
Trigger: CGACGGGCATGCCTGTAACCATGTCACCGGCAAGTG...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACGGGCAGAAGTGCCTCTaGCTGCAACCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNGQKCL*LQPMRR
Trigger: CCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCC...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
3UTR CAA 72 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTaGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPS*ANETLSGRSAP
Trigger: TGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGCGCCCATCACGCCCTTaGGCTGGTTGGTTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLRPSRP*AGWFLG
Trigger: ACCTAGAAACCAACCAGCGCAAGGGCGTGATGGGCG...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR GCA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGACTTTGGGTAGTTTCTaGCTCCGGAGCGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: SKRRSLSGTLPSLANETLTLGSF*LRSGIR
Trigger: CCGGATCCCGCTCCGGAGGCAGAAACTACCCAAAGT...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGGGCCACTACGACTTTaGGTAGTTTCTGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETGPLRL*VVSASG
Trigger: TCCGGAGGCAGAAACTACCCAAAGTCGTAGTGGCCC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCGAACCCTCCCATCTTTaGCCAATGAGACGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAEVPLAATNEKVALTKSEPSHL*PMRRCL
Trigger: CAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTATCACGCCCTTGCGCTaGTTGGTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KRRSLSGTLPSLANETLSITPLR*LVSRWQ
Trigger: CTGCCACCTAGAAACCAACCAGCGCAAGGGCGTGAT...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CCA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGTGTTATCCAGGTCGTaGTGGGCCACTACGACTTTG +
Preference number: 4 (lower is better)
Translates to: ASKRRSLSGTLPSLANETVLSRS*WATTTL
Trigger: CAAAGTCGTAGTGGCCCACCACGACCTGGATAACAC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR TCA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGTCTGGCTGCAACCAATaGGAAGGTAGCCCTAACCAA +
Preference number: 4 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLSGCNQ*EGSPNQ
Trigger: TTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGA...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp ACCAGCCGGGCTCACAGCGGCACGCGCCGCTCCGCGGGTGGCACGTaGCGTGCTGGCACTGGCACGCATGCTCGCAGCGCGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: TSRAHSGTRRSAGGT*RAGTGTHARSARPS
Trigger: GCTGGGGCGCGCGCTGCGAGCATGCGTGCCAGTGCCAGCACGGCACGTGCCACCCGCGGAGCGGCGCGTGCCGCTGTGAGCCCGGCTGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CGCGGCCCAGGCTGCGAGTCTTGCCGCGCAGCTCAGCGGCCAACATaGAGGCAGCCTCGGGCGCGCTTCGCGGGGGACCGCCGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: RGPGCESCRAAQRPT*RQPRARFAGDRRRP
Trigger: CGGACGCCGGCGGTCCCCCGCGAAGCGCGCCCGAGGCTGCCTCCATGTTGGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGGGCCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CGGTCTGTGGGTCGCAGCGCGACGTGGCGCTGCAGTAGCACGCGCTaGCGCACTGCGCGCCCCACCAGCCGGGCTCACAGCGGCACGCGC +
Preference number: 5 (lower is better)
Translates to: RSVGRSATWRCSSTR*RTARPTSRAHSGTR
Trigger: GCGCGTGCCGCTGTGAGCCCGGCTGGTGGGGCGCGCAGTGCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACCCACAGACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CCGGGCTCGCACGTCAAGCAGCGGCCCTCGGCCACCGTGCACGGCTaGTGGCCCTTGCACTGGCCACACCGGCGGCGACAGCCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: PGSHVKQRPSATVHG*WPLHWPHRRRQPKP
Trigger: CGGCTTGGGCTGTCGCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGTGGCCGAGGGCCGCTGCTTGACGTGCGAGCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 90 bp CCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGCGGCGCTGCGAAGCTaGGGGAGCTGCGCGCGGACGAGCCACAGCCTGCTACAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGSVGGVGWRAALRS*GSCARTSHSLLQGG
Trigger: CCCACCCTGTAGCAGGCTGTGGCTCGTCCGCGCGCAGCTCCCTCAGCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCACGCTACCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CGGGCGGGCACGTCACGTTACAGTGGGGCCCGTGGACGCCAGGGCTaGACAGGCAGCGCCCCGACTGGAAGTCGCAGTGTCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: RAGTSRYSGARGRQG*TGSAPTGSRSVRCR
Trigger: GCGGCAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCTGTGCAGCCCTGGCGTCCACGGGCCCCACTGTAACGTGACGTGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CAGTGGGGCCCGTGGACGCCAGGGCTGCACAGGCAGCGCCCCGACTaGAAGTCGCAGTGTCCGCTGCCGCAGTCGGCGCACACGAAGGCG +
Preference number: 5 (lower is better)
Translates to: QWGPWTPGLHRQRPD*KSQCPLPQSAHTKA
Trigger: CGCCTTCGTGTGCGCCGACTGCGGCAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCTGTGCAGCCCTGGCGTCCACGGGCCCCACTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGGCAGCGGCGCTGTGCTaGCCGTGGATCCAGGACACC +
Preference number: 5 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGAAALC*PWIQDT
Trigger: GGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTGC...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCCCAGGCTGCGAGTCTaGCCGCGCAGCTCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPPRLRV*PRSSAA
Trigger: GGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGGG...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGGCGGCACGGAGCGCTaGGCTTTCTGTGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPGGTER*AFCGGA
Trigger: GGCGCCCCCACAGAAAGCCAAGCGCTCCGTGCCGCC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp ACGTCAAGCAGCGGCCCTCGGCCACCGTGCACGGCTGCTGGCCCTTaGACTGGCCACACCGGCGGCGACAGCCCAAGCCGTAGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: TSSSGPRPPCTAAGP*TGHTGGDSPSRRSR
Trigger: CCGGCTTCTACGGCTTGGGCTGTCGCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGTGGCCGAGGGCCGCTGCTTGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CGACCGTATGCGCCGATTTGTCGCTGGGCGTCCGTTTCCTCTTGCTaGGGCTGGGCGCGGCCTCGGAGCCTGGCGGCGGTGGTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: RPYAPICRWASVSSC*GWARPRSLAAVVRA
Trigger: CGCCCTCACCACCGCCGCCAGGCTCCGAGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCGGCGTCCGTTTCCTCTaGCTGGGGCTGGGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: WGGSRPLSACQASTNGMGGVRFL*LGLGAA
Trigger: GGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCC...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCCCAGGCTGCGAGTCTaGCCGCGCAGCTCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLPRLRV*PRSSAA
Trigger: GGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGGG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 90 bp TGGCACTGGCACGCATGCTCGCAGCGCGCGCCCCAGCGCCGCGCGTaGCAAGTACACTGGCCTGTCACGTCCTCGCACTGCCCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: WHWHACSQRAPQRRA*QVHWPVTSSHCPCG
Trigger: CCCACACGGGCAGTGCGAGGACGTGACAGGCCAGTGTACTTGTCACGCGCGGCGCTGGGGCGCGCGCTGCGAGCATGCGTGCCAGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp GCTCGCGACAGTACTTGCCGCGGTAGCCCGGCTCGCAGGCACACGTaGCGTCCACAGGGTGGCAGCGGCCGCGGAAGCACTGGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: ARDSTCRGSPARRHT*RPQGGSGRGSTGSS
Trigger: GCTACTGCCAGTGCTTCCGCGGCCGCTGCCACCCTGTGGACGGCACGTGTGCCTGCGAGCCGGGCTACCGCGGCAAGTACTGTCGCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp AGCCCAAGCCGTAGAAGCCGGCGGGGCACGGCTCGCGACAGTACTTaGCGCGGTAGCCCGGCTCGCAGGCACACGTGCCGTCCACAGGGT +
Preference number: 5 (lower is better)
Translates to: SPSRRSRRGTARDST*RGSPARRHTCRPQG
Trigger: ACCCTGTGGACGGCACGTGTGCCTGCGAGCCGGGCTACCGCGGCAAGTACTGTCGCGAGCCGTGCCCCGCCGGCTTCTACGGCTTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp GGTGGTGAGGGCGCACGGCCAGCTGCAGCGGCGCTGTGCTTGCCGTaGATCCAGGACACCTTAGGCTTGGTGGCGGGGTCAGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: GGEGARPAAAALCLP*IQDTLGLVAGSGGG
Trigger: GCCGCCACCTGACCCCGCCACCAAGCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGCTGGCCGTGCGCCCTCACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp GGGTCCGGGGGCTGCCGTGTTCGACCGTATGCGCCGATTTGTCGCTaGGCGTCCGTTTCCTCTTGCTGGGGCTGGGCGCGGCCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: GSGGCRVRPYAPICR*ASVSSCWGWARPRS
Trigger: GCTCCGAGGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCCCCCGGACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCGGAGCACGGCACACGTaGCGGCCGCGAGGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: GRESPAKRLSGLDQRDGPGARHT*RPRGFS
Trigger: ACTGAACCCTCGCGGCCGCAACGTGTGCCGTGCTCC...GGGCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CAGGGCTGCACAGGCAGCGCCCCGACTGGAAGTCGCAGTGTCCGCTaGCGCAGTCGGCGCACACGAAGGCGCAGTCCTCGCCGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: QGCTGSAPTGSRSVR*RSRRTRRRSPRRKC
Trigger: GCACTTACGGCGAGGACTGCGCCTTCGTGTGCGCCGACTGCGGCAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCTGTGCAGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CGCGGCGTTGGGTCGCGGGTCCGGGGGCTGCCGTGTTCGACCGTATaGGCCGATTTGTCGCTGGGCGTCCGTTTCCTCTTGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RGVGSRVRGLPCSTV*ADLSLGVRFLLLGL
Trigger: CAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCCCCCGGACCCGCGACCCAACGCCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGACGCCCTTGCGCTGGTaGGTTTCTAGGTGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGTPLRW*VSRWQA
Trigger: TGCCTGCCACCTAGAAACCAACCAGCGCAAGGGCGT...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCCCCACACTCGTCCCCTaGCTGCCTCCAGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: WGGSRPLSACQASTNGMGPTLVP*LPPASA
Trigger: TGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGG...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATCACGGCTGCTGGCCCTaGCACTGGCCACACCGGCGG +
Preference number: 5 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYHGCWP*HWPHRR
Trigger: CCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTG...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGGCGTCCGTTTCCTCTaGCTGGGGCTGGGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQGVRFL*LGLGAA
Trigger: GGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CCCGCGTTGCAGCGCGTACACTTGCCGGTGACATGGTTACAGGCATaGCCGTCGCGGCATGGCGGACAGCGGTGGCTGCAGCCCTCGCCA +
Preference number: 5 (lower is better)
Translates to: PALQRVHLPVTWLQA*PSRHGGQRWLQPSP
Trigger: TGGCGAGGGCTGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGCCAGAGGCACCGATCCAGCCCGCGTaGCAGCGCGTACACTTGCCG +
Preference number: 5 (lower is better)
Translates to: VAPGSIGTAKGGSLQPEAPIQPA*QRVHLP
Trigger: CGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGG...TGCCTCTGGCTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 90 bp ACCGGTCGCCGATCCAGCCCGCGTTGCAGCGCGTACACTTGCCGGTaGCATGGTTACAGGCATGCCCGTCGCGGCATGGCGGACAGCGGT +
Preference number: 5 (lower is better)
Translates to: TGRRSSPRCSAYTCR*HGYRHARRGMADSG
Trigger: ACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGGCGACCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp GTGGAGTTGCCTTCGCACACCGCAATCCCACACTCGTCCCCTTGCTaGCTCCAGCCAGCGCAGCACGTGGGCACCTGGGAGCCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: VELPSHTAIPHSSPC*LQPAQHVGTWEPGA
Trigger: TGCTCCCGGCTCCCAGGTGCCCACGTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CGCTGCCGCAGTCGGCGCACACGAAGGCGCAGTCCTCGCCGTAAGTaGCATTGCTACACTTGGTCTCGCACCGGTCGCCGATCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RCRSRRTRRRSPRRK*HCYTWSRTGRRSSP
Trigger: CGGGCTGGATCGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCACTTACGGCGAGGACTGCGCCTTCGTGTGCGCCGACTGCGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CGGGGCAGCTTCATGCTGATGCGACTGAAGCGCCCGCATAGTCGGTaGGGCGCCTTCTTCCTCCCAAGCGAAAGCTCCCTGCGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: RGSFMLMRLKRPHSR*GAFFLPSESSLRGR
Trigger: CCGCCCCCGCAGGGAGCTTTCGCTTGGGAGGAAGAAGGCGCCGCACCGACTATGCGGGCGCTTCAGTCGCATCAGCATGAAGCTGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623402.1
CDS CCA 90 bp TCGCCGATCCAGCCCGCGTTGCAGCGCGTACACTTGCCGGTGACATaGTTACAGGCATGCCCGTCGCGGCATGGCGGACAGCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPIQPALQRVHLPVT*LQACPSRHGGQRWL
Trigger: CAGCCACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCTGGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCCAGCTACACAGCTCCTaGCAGTCGGGGCCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: AGVNQMPGSLASGSSPGLQLHSS*QSGPQN
Trigger: GTTCTGGGGCCCCGACTGCAAGGAGCTGTGTAGCTG...GAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGTTGCAGCGCGTACACTaGCCGGTGACATGGTTACAG +
Preference number: 5 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGLQRVH*PVTWLQ
Trigger: CTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAA...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGGCCTCCCGGCTCTTCTaGCGCGGCGGCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQASRLF*RGGFWM
Trigger: CATCCAGAAGCCGCCGCGCAAGAAGAGCCGGGAGGC...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGGCCAATAGGAGGCCGCCCGTGCCCGGTAGCGTGGGAGGTGTGGGGTGGCGGGGGAACCCTCCCATCTTaGGCCAATGAGACGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RPIGGRPCPVAWEVWGGGGTLPS*ANETLS
Trigger: AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCC...CCCGCCACCCCACACCTCCCACGCTACCGGGCACGGGCGGCCTCCTATTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 90 bp CGGGGCAGCTTCATGCTGATGCGACTGAAGCGCCCGCATAGTCGGTaGGGCGCCTTCTTCCTCCCAAGCGAAAGCTCCCGGCGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: RGSFMLMRLKRPHSR*GAFFLPSESSRRVG
Trigger: CCCTACGCGCCGGGAGCTTTCGCTTGGGAGGAAGAAGGCGCCGCACCGACTATGCGGGCGCTTCAGTCGCATCAGCATGAAGCTGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494535.1
ENST00000622235.5
CDS GCA 90 bp CATGGTTACAGGCATGCCCGTCGCGGCATGGCGGACAGCGGTGGCTaGAGCCCTCGCCATAGAAACCGGTGGCGCAAGGCTGGTCGCACT +
Preference number: 5 (lower is better)
Translates to: HGYRHARRGMADSGG*SPRHRNRWRKAGRT
Trigger: AGTGCGACCAGCCTTGCGCCACCGGTTTCTATGGCGAGGGCTGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATGGAGCACGGCACACGTaGCGGCCGCGAGGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: VRPRPTGWALPARAHCSNGARHT*RPRGFS
Trigger: ACTGAACCCTCGCGGCCGCAACGTGTGCCGTGCTCC...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCCCACACTCGTCCCCTaGCTGCCTCCAGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: VRPRPTGWALPARAHCSNPTLVP*LPPASA
Trigger: TGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGG...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTTGCAGGCGCACTGGTaGTTGCAGCTGCGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYLQAHW*LQLRPH
Trigger: GTGGGGCCGCAGCTGCAACAACCAGTGCGCCTGCAA...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCACCGTATGCGCCGATTaGTCGCTGGGCGTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: WGGSRPLSACQASTNGMGTVCAD*SLGVRF
Trigger: GAAACGGACGCCCAGCGACAAATCGGCGCATACGGT...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 90 bp GTGGCGGCAGCGGCACTCGCCAGGCCTCACGCACACCTCGTTCTCTaGGCACGTGGAGTTGCCTTCGCACACCGCAATCCCACACTCGTC +
Preference number: 5 (lower is better)
Translates to: VAAAALARPHAHLVL*ARGVAFAHRNPTLV
Trigger: GACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGCCTGGCGAGTGCCGCTGCCGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CGTACACTTGCCGGTGACATGGTTACAGGCATGCCCGTCGCGGCATaGCGGACAGCGGTGGCTGCAGCCCTCGCCATAGAAACCGGTGGC +
Preference number: 5 (lower is better)
Translates to: RTLAGDMVTGMPVAA*RTAVAAALAIETGG
Trigger: GCCACCGGTTTCTATGGCGAGGGCTGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp TGGGGAGGGAGTCGCCCGCTAAGCGCCTGTCAGGCCTCGACCAACGGGATGGGCTCTGAGCACGTGGAGTaGCCTTCGCACACCGCAATC +
Preference number: 5 (lower is better)
Translates to: WGGSRPLSACQASTNGMGSEHVE*PSHTAI
Trigger: GATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGA...GCCCATCCCGTTGGTCGAGGCCTGACAGGCGCTTAGCGGGCGACTCCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTCCAATCAGGACACCTTAGGCTaGGTGGCGGGGTCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: VRPRPTGWALPARAHCSNQDTLG*VAGSGG
Trigger: GCCACCTGACCCCGCCACCAAGCCTAAGGTGTCCTG...ATTGGAGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCAGCTACACAGCTCCTaGCAGTCGGGGCCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSIQLHSS*QSGPQN
Trigger: GTTCTGGGGCCCCGACTGCAAGGAGCTGTGTAGCTG...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGTCGCAGGGAGACGAGTaGCAGGCGCACTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQSQGDE*QAHWLL
Trigger: CAACAACCAGTGCGCCTGCAACTCGTCTCCCTGCGA...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCAGCCCGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCCCGATCCAGCCCGCGTaGCAGCGCGTACACTTGCCG +
Preference number: 5 (lower is better)
Translates to: AARAEVPLAATNEKVALTPIQPA*QRVHLP
Trigger: CGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGG...GGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CCAGTGGAAGTAGCCCCGGGCTCTATTGGGACGGCCAAGGGAGGGAGCCTCCAGACCGTATGCGCCGATTaGTCGCTGGGCGTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: PVEVAPGSIGTAKGGSLQTVCAD*SLGVRF
Trigger: GAAACGGACGCCCAGCGACAAATCGGCGCATACGGT...CTGGAGGCTCCCTCCCTTGGCCGTCCCAATAGAGCCCGGGGCTACTTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp AGCGGCACTCGCCAGGCCTCACGCACACCTCGTTCTCTGAGCACGTaGAGTTGCCTTCGCACACCGCAATCCCACACTCGTCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SGTRQASRTPRSLST*SCLRTPQSHTRPLA
Trigger: AGCAAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGCCTGGCGAGTGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTCTGAGCACGTGGAGTaGCCTTCGCACACCGCAATC +
Preference number: 5 (lower is better)
Translates to: GVNQMPGSLASGSSPGLYSEHVE*PSHTAI
Trigger: GATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGA...ATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCACGGCTGCTGGCCCTaGCACTGGCCACACCGGCGG +
Preference number: 5 (lower is better)
Translates to: ASKRRSLSGTLPSLANETHGCWP*HWPHRR
Trigger: CCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTG...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGCCTGTCAGGCCTCGACCAACGGGATGGGCCCTTCCCGCCAGAGCACACTGCTTTGCAGCGCGTACACTaGCCGGTGACATGGTTACAG +
Preference number: 5 (lower is better)
Translates to: RLSGLDQRDGPFPPEHTALQRVH*PVTWLQ
Trigger: CTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAA...AGCAGTGTGCTCTGGCGGGAAGGGCCCATCCCGTTGGTCGAGGCCTGACAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACCAGGCGCACTGGTTGTaGCAGCTGCGGCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNQAHWL*QLRPHQ
Trigger: CTGGTGGGGCCGCAGCTGCAACAACCAGTGCGCCTG...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGGGCGGCACGGAGCGCTaGGCTTTCTGTGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SKRRSLSGTLPSLANETLGGTER*AFCGGA
Trigger: GGCGCCCCCACAGAAAGCCAAGCGCTCCGTGCCGCC...CAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp TGCTGGGGGCCTATAAATACATCTCCTCAGGCCACTAGAGTCGCCCCTGGAGGTGCCTCCCGGCTCTTCTaGCGCGGCGGCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CWGPINTSPQATRVAPGGASRLF*RGGFWM
Trigger: CATCCAGAAGCCGCCGCGCAAGAAGAGCCGGGAGGC...ACCTCCAGGGGCGACTCTAGTGGCCTGAGGAGATGTATTTATAGGCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CAA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACAACTGGCGCGGGCACTaGGTGTCGCAGTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNNWRGH*VSQLAP
Trigger: CGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGTT...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCAGGCGCACTGGTTGTaGCAGCTGCGGCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: ASKRRSLSGTLPSLANETQAHWL*QLRPHQ
Trigger: CTGGTGGGGCCGCAGCTGCAACAACCAGTGCGCCTG...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GGGTCAACCAGATGCCCGGGAGCCTGGCCAGTGGAAGTAGCCCCGGGCTCTATTTCCAGGAAGCTGCAGTaGAGTGTGTTATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GSTRCPGAWPVEVAPGSISRKLQ*SVLSRS
Trigger: CGACCTGGATAACACACTCAACTGCAGCTTCCTGGA...AATAGAGCCCGGGGCTACTTCCACTGGCCAGGCTCCCGGGCATCTGGTTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGTTGCAGGCGCACTGGTaGTTGCAGCTGCGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLLQAHW*LQLRPH
Trigger: GTGGGGCCGCAGCTGCAACAACCAGTGCGCCTGCAA...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp ATTTTATTAAGAAAGCTTTGGCCAAGCCCCCGCCGGGAGGAGCCCATCCTGGGGGTGCCATTGCTACACTaGGTCTCGCACCGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: ILLRKLWPSPRREEPILGVPLLH*VSHRSP
Trigger: CGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCAC...CCCCAGGATGGGCTCCTCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS-3UTR CAA 90 bp GAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTGGTCGGAGCGCTCCATAACGTGCCATTGCTACACTaGGTCTCGCACCGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: EPSHLWPMRRCLVGALHNVPLLH*VSHRSP
Trigger: CGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCAC...GTTATGGAGCGCTCCGACCAGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 90 bp CTGGTGCCTCCTCATGGGGTACACAGTACACAGGGCCTTCATCAGTaGTGTCAAACGAGGAGAAGGAGGCCCGAGAGGACCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: LVPPHGVHSTQGLHQ*CQTRRRRPERTRMV
Trigger: CACCATCCTGGTCCTCTCGGGCCTCCTTCTCCTCGTTTGACACCACTGATGAAGGCCCTGTGTACTGTGTACCCCATGAGGAGGCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494535.1
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp CGGGCAGAAGTGCCTCTGGCTGCAACCAATGAGAAGGTAGCCCTAACCAAGTCCACGCCCTTGCGCTGGTaGGTTTCTAGGTGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: RAEVPLAATNEKVALTKSTPLRW*VSRWQA
Trigger: TGCCTGCCACCTAGAAACCAACCAGCGCAAGGGCGT...GGACTTGGTTAGGGCTACCTTCTCATTGGTTGCAGCCAGAGGCACTTCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGGCGCCCATCACGCCCTaGCGCTGGTTGGTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: ASKRRSLSGTLPSLANETAPITP*RWLVSR
Trigger: CCTAGAAACCAACCAGCGCAAGGGCGTGATGGGCGC...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCGCCCATCACGCCCTaGCGCTGGTTGGTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLAPITP*RWLVSR
Trigger: CCTAGAAACCAACCAGCGCAAGGGCGTGATGGGCGC...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTAACTGGCGCGGGCACTaGGTGTCGCAGTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: KRRSLSGTLPSLANETLSNWRGH*VSQLAP
Trigger: CGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGTT...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp ATGAGACGCTGTCTGGTCGGAGCGCTCCATAACTCGGCCAATGGGGAGGGAGTCTCCAGGAAGCTGCAGTaGAGTGTGTTATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: MRRCLVGALHNSANGEGVSRKLQ*SVLSRS
Trigger: CGACCTGGATAACACACTCAACTGCAGCTTCCTGGA...GACTCCCTCCCCATTGGCCGAGTTATGGAGCGCTCCGACCAGACAGCGTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGTCGCAGGGAGACGAGTaGCAGGCGCACTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: ASKRRSLSGTLPSLANETSQGDE*QAHWLL
Trigger: CAACAACCAGTGCGCCTGCAACTCGTCTCCCTGCGA...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp GCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGTGGGCCACTACGACTTaGGGTAGTTTCTGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: ASKRRSLSGTLPSLANETWATTT*GSFCLR
Trigger: CCGGAGGCAGAAACTACCCAAAGTCGTAGTGGCCCA...CGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AGTCCACTCCTGGCCAGTAAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGGAACCCTCCCATCTTaGGCCAATGAGACGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SPLLASKRRSLSGTLPSLGTLPS*ANETLS
Trigger: AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCC...CAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTTACTGGCCAGGAGTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS-3UTR CAA 90 bp AAGAGGCGGTCTTTAAGCGGAACCCTCCCATCTTTGGCCAATGAGACGCTGTCTTTTATTAAGAAAGCTTaGGCCAAGCCCCCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: KRRSLSGTLPSLANETLSFIKKA*AKPPPG
Trigger: TCCCGGCGGGGGCTTGGCCAAAGCTTTCTTAATAAA...AGACAGCGTCTCATTGGCCAAAGATGGGAGGGTTCCGCTTAAAGACCGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622235.5
CDS GCA 72 bp CAGCGGCACGCGCCGCTCCGCGGGTGGCACGTGCCGTaGTGGCACTGGCACGCATGCTCGCAGCGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: QRHAPLRGWHVP*WHWHACSQRAP
Trigger: GGGCGCGCGCTGCGAGCATGCGTGCCAGTGCCAGCACGGCACGTGCCACCCGCGGAGCGGCGCGTGCCGCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GCTCACAGCGGCACGCGCCGCTCCGCGGGTGGCACGTaGCGTGCTGGCACTGGCACGCATGCTCGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: AHSGTRRSAGGT*RAGTGTHARSA
Trigger: CGCGCTGCGAGCATGCGTGCCAGTGCCAGCACGGCACGTGCCACCCGCGGAGCGGCGCGTGCCGCTGTGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp AGGCGCCGGTCTGTGGGTCGCAGCGCGACGTGGCGCTaGAGTAGCACGCGCTGGCGCACTGCGCGCCCCACC +
Preference number: 6 (lower is better)
Translates to: RRRSVGRSATWR*SSTRWRTARPT
Trigger: GGTGGGGCGCGCAGTGCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACCCACAGACCGGCGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CCTGCGCGCCCAGGGCCACCTCGGCGCGGCCCAGGCTaGGAGTCTTGCCGCGCAGCTCAGCGGCCAACATGG +
Preference number: 6 (lower is better)
Translates to: PARPGPPRRGPG*ESCRAAQRPTW
Trigger: CCATGTTGGCCGCTGAGCTGCGCGGCAAGACTCGCAGCCTGGGCCGCGCCGAGGTGGCCCTGGGCGCGCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GGTCGCAGCGCGACGTGGCGCTGCAGTAGCACGCGCTaGCGCACTGCGCGCCCCACCAGCCGGGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: GRSATWRCSSTR*RTARPTSRAHS
Trigger: GCTGTGAGCCCGGCTGGTGGGGCGCGCAGTGCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp AGCGCTTGGCTTTCTGTGGGGGCGCCGGCTTTTCCCTaGGGCCCTGCGCGCCCAGGGCCACCTCGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: SAWLSVGAPAFP*GPARPGPPRRG
Trigger: GCCGCGCCGAGGTGGCCCTGGGCGCGCAGGGCCCCAGGGAAAAGCCGGCGCCCCCACAGAAAGCCAAGCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp CAGCGGCCCTCGGCCACCGTGCACGGCTGCTGGCCCTaGCACTGGCCACACCGGCGGCGACAGCCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: QRPSATVHGCWP*HWPHRRRQPKP
Trigger: CGGCTTGGGCTGTCGCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGTGGCCGAGGGCCGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp AGCTCCCTGCGGGGGCGGGGTCGGCGCGTAGGGTCCTaGCCGCGGCAAGCGCAGCAGCAGCCGAGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: SSLRGRGRRVGS*PRQAQQQPSSE
Trigger: CTCGCTGCTCGGCTGCTGCTGCGCTTGCCGCGGCAAGGACCCTACGCGCCGACCCCGCCCCCGCAGGGAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623402.1
CDS GCA 72 bp AGCGGCCCTCGGCCACCGTGCACGGCTGCTGGCCCTTaGACTGGCCACACCGGCGGCGACAGCCCAAGCCGT +
Preference number: 6 (lower is better)
Translates to: SGPRPPCTAAGP*TGHTGGDSPSR
Trigger: ACGGCTTGGGCTGTCGCCGCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGTGGCCGAGGGCCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CGGGCTCGCACGTCAAGCAGCGGCCCTCGGCCACCGTaGACGGCTGCTGGCCCTTGCACTGGCCACACCGGC +
Preference number: 6 (lower is better)
Translates to: RARTSSSGPRPP*TAAGPCTGHTG
Trigger: GCCGGTGTGGCCAGTGCAAGGGCCAGCAGCCGTGCACGGTGGCCGAGGGCCGCTGCTTGACGTGCGAGCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GAGCCACAGCCTGCTACAGGGTGGGTGCGCCCGCCCTaGCCAGCTCGCCCGCCGCCTCCCGGCTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: EPQPATGWVRPP*PARPPPPGSSC
Trigger: GCAAGAAGAGCCGGGAGGCGGCGGGCGAGCTGGGCAGGGCGGGCGCACCCACCCTGTAGCAGGCTGTGGCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp GTGGGAGGTGTGGGGTGGCGGGCGGCGCTGCGAAGCTaGGGGAGCTGCGCGCGGACGAGCCACAGCCTGCTA +
Preference number: 6 (lower is better)
Translates to: VGGVGWRAALRS*GSCARTSHSLL
Trigger: TAGCAGGCTGTGGCTCGTCCGCGCGCAGCTCCCTCAGCTTCGCAGCGCCGCCCGCCACCCCACACCTCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GAAGCTGAGGGAGCTGCGCGCGGACGAGCCACAGCCTaGTACAGGGTGGGTGCGCCCGCCCTGCCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: EAEGAARGRATA*YRVGAPALPSS
Trigger: CGAGCTGGGCAGGGCGGGCGCACCCACCCTGTAGCAGGCTGTGGCTCGTCCGCGCGCAGCTCCCTCAGCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp CCGTGGACGCCAGGGCTGCACAGGCAGCGCCCCGACTaGAAGTCGCAGTGTCCGCTGCCGCAGTCGGCGCAC +
Preference number: 6 (lower is better)
Translates to: PWTPGLHRQRPD*KSQCPLPQSAH
Trigger: GTGCGCCGACTGCGGCAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCTGTGCAGCCCTGGCGTCCACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 90 bp GGGTCGCGGGTCCGGGGGCTGCCGTGTTCGACCGTATGCGCCGATTaGTCGCTGGGCGTCCGTTTCCTCTTGCTGGGGCTGGGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSRVRGLPCSTVCAD*SLGVRFLLLGLGAA
Trigger: GGCCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCCCCCGGACCCGCGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp CGATCGCAGCGCGCGCCGAACGTACGCTCGCGGCACTaGCAGCGGCCGCTCTGCTGCTCGCAGGGAGACGAG +
Preference number: 6 (lower is better)
Translates to: RSQRAPNVRSRH*QRPLCCSQGDE
Trigger: CTCGTCTCCCTGCGAGCAGCAGAGCGGCCGCTGTCAGTGCCGCGAGCGTACGTTCGGCGCGCGCTGCGATCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp ACGTGGGCACCTGGGAGCCGGGAGCACGGCACACGTTaGGGCCGCGAGGGTTCAGTTCCTGAGGCGCCACGG +
Preference number: 6 (lower is better)
Translates to: TWAPGSREHGTR*GREGSVPEAPR
Trigger: CCGTGGCGCCTCAGGAACTGAACCCTCGCGGCCGCAACGTGTGCCGTGCTCCCGGCTCCCAGGTGCCCACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CGTAGAAGCCGGCGGGGCACGGCTCGCGACAGTACTTaGCGCGGTAGCCCGGCTCGCAGGCACACGTGCCGT +
Preference number: 6 (lower is better)
Translates to: RRSRRGTARDST*RGSPARRHTCR
Trigger: ACGGCACGTGTGCCTGCGAGCCGGGCTACCGCGGCAAGTACTGTCGCGAGCCGTGCCCCGCCGGCTTCTACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp CACGCATGCTCGCAGCGCGCGCCCCAGCGCCGCGCGTaGCAAGTACACTGGCCTGTCACGTCCTCGCACTGC +
Preference number: 6 (lower is better)
Translates to: HACSQRAPQRRA*QVHWPVTSSHC
Trigger: GCAGTGCGAGGACGTGACAGGCCAGTGTACTTGTCACGCGCGGCGCTGGGGCGCGCGCTGCGAGCATGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp ACAGGCAGCGCCCCGACTGGAAGTCGCAGTGTCCGCTaGCGCAGTCGGCGCACACGAAGGCGCAGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: TGSAPTGSRSVR*RSRRTRRRSPR
Trigger: GCGAGGACTGCGCCTTCGTGTGCGCCGACTGCGGCAGCGGACACTGCGACTTCCAGTCGGGGCGCTGCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GGCCCCAGAACTGGCGCGGGCACTTGGTGTCGCAGTTaGCACCGAAGTAGCCGTGGCGGCAGCGGCACTCGC +
Preference number: 6 (lower is better)
Translates to: GPRTGAGTWCRS*HRSSRGGSGTR
Trigger: GCGAGTGCCGCTGCCGCCACGGCTACTTCGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGTTCTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 90 bp GGCGCCTTCTTCCTCCCAAGCGAAAGCTCCCGGCGCGTAGGGTCCTaGCCGCGGCAAGCGCAGCAGCAGCCGAGCAGCGAGAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GAFFLPSESSRRVGS*PRQAQQQPSSESSR
Trigger: CCTGCTGCTCTCGCTGCTCGGCTGCTGCTGCGCTTGCCGCGGCAAGGACCCTACGCGCCGGGAGCTTTCGCTTGGGAGGAAGAAGGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494535.1
ENST00000622235.5
CDS CAA 90 bp GCTGCAGCGGCGCTGTGCTTGCCGTGGATCCAGGACACCTTAGGCTaGGTGGCGGGGTCAGGTGGCGGCGGTTTCCTGCGCTCGGGCGAT +
Preference number: 6 (lower is better)
Translates to: AAAALCLPWIQDTLG*VAGSGGGGFLRSGD
Trigger: ATCGCCCGAGCGCAGGAAACCGCCGCCACCTGACCCCGCCACCAAGCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp GCACGGCACACGTTGCGGCCGCGAGGGTTCAGTTCCTaGGGCGCCACGGTGTCCGGCAGCATCCAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARHTLRPRGFSS*GATVSGSIQSS
Trigger: GCTGCTCTGGATGCTGCCGGACACCGTGGCGCCTCAGGAACTGAACCCTCGCGGCCGCAACGTGTGCCGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CGCCGTGGAGTCCGGGCGGGCACGTCACGTTACAGCTaGCGGGACATAGGGTCAAGGCATGCCACAGCCGCC +
Preference number: 6 (lower is better)
Translates to: RRGVRAGTSRYS*RDIGSRHATAA
Trigger: GGCGGCTGTGGCATGCCTTGACCCTATGTCCCGGCAGCTGTAACGTGACGTGCCCGCCCGGACTCCACGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494535.1
CDS CCA 72 bp GGCGCACGGCCAGCTGCAGCGGCGCTGTGCTTGCCGTaGATCCAGGACACCTTAGGCTTGGTGGCGGGGTCA +
Preference number: 6 (lower is better)
Translates to: GARPAAAALCLP*IQDTLGLVAGS
Trigger: TGACCCCGCCACCAAGCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGCTGGCCGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp TTCCTCCCAAGCGAAAGCTCCCGGCGCGTAGGGTCCTaGCCGCGGCAAGCGCAGCAGCAGCCGAGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: FLPSESSRRVGS*PRQAQQQPSSE
Trigger: CTCGCTGCTCGGCTGCTGCTGCGCTTGCCGCGGCAAGGACCCTACGCGCCGGGAGCTTTCGCTTGGGAGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494535.1
ENST00000622235.5
CDS CAA 90 bp GTCTCGCACCGGTCGCCGATCCAGCCCGCGTTGCAGCGCGTACACTaGCCGGTGACATGGTTACAGGCATGCCCGTCGCGGCATGGCGGA +
Preference number: 6 (lower is better)
Translates to: VSHRSPIQPALQRVH*PVTWLQACPSRHGG
Trigger: TCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGGCGACCGGTGCGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CCTTCGCACACCGCAATCCCACACTCGTCCCCTTGCTaGCTCCAGCCAGCGCAGCACGTGGGCACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PSHTAIPHSSPC*LQPAQHVGTWE
Trigger: CTCCCAGGTGCCCACGTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GGTGGTGAGGGCGCACGGCCAGCTGCAGCGGCGCTGTaGTTGCCGTGGATCCAGGACACCTTAGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GGEGARPAAAAL*LPWIQDTLGLV
Trigger: CACCAAGCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGCCGCTGCAGCTGGCCGTGCGCCCTCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GGGTCGCGGGTCCGGGGGCTGCCGTGTTCGACCGTATaGGCCGATTTGTCGCTGGGCGTCCGTTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: GSRVRGLPCSTV*ADLSLGVRFLL
Trigger: CAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCCCCCGGACCCGCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GATCCAGGACACCTTAGGCTTGGTGGCGGGGTCAGGTaGCGGCGGTTTCCTGCGCTCGGGCGATGGCGACAG +
Preference number: 6 (lower is better)
Translates to: DPGHLRLGGGVR*RRFPALGRWRQ
Trigger: CTGTCGCCATCGCCCGAGCGCAGGAAACCGCCGCCACCTGACCCCGCCACCAAGCCTAAGGTGTCCTGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GGCTGCCGTGTTCGACCGTATGCGCCGATTTGTCGCTaGGCGTCCGTTTCCTCTTGCTGGGGCTGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GCRVRPYAPICR*ASVSSCWGWAR
Trigger: CCGCGCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp AGCAGGACGAGCAGCGCGCCCGCGCCCATCACGCCCTaGCGCTGGTTGGTTTCTAGGTGGCAGGCACCAGTG +
Preference number: 6 (lower is better)
Translates to: SRTSSAPAPITP*RWLVSRWQAPV
Trigger: CACTGGTGCCTGCCACCTAGAAACCAACCAGCGCAAGGGCGTGATGGGCGCGGGCGCGCTGCTCGTCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494535.1
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp GCGCTGTGCTTGCCGTGGATCCAGGACACCTTAGGCTaGGTGGCGGGGTCAGGTGGCGGCGGTTTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: ALCLPWIQDTLG*VAGSGGGGFLR
Trigger: GCGCAGGAAACCGCCGCCACCTGACCCCGCCACCAAGCCTAAGGTGTCCTGGATCCACGGCAAGCACAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp CGATCCAGCCCGCGTTGCAGCGCGTACACTTGCCGGTaGCATGGTTACAGGCATGCCCGTCGCGGCATGGCG +
Preference number: 6 (lower is better)
Translates to: RSSPRCSAYTCR*HGYRHARRGMA
Trigger: CGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp TTGCCTTCGCACACCGCAATCCCACACTCGTCCCCTTaGTGCCTCCAGCCAGCGCAGCACGTGGGCACCTGG +
Preference number: 6 (lower is better)
Translates to: LPSHTAIPHSSP*CLQPAQHVGTW
Trigger: CCAGGTGCCCACGTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GCCGGTGACATGGTTACAGGCATGCCCGTCGCGGCATaGCGGACAGCGGTGGCTGCAGCCCTCGCCATAGAA +
Preference number: 6 (lower is better)
Translates to: AGDMVTGMPVAA*RTAVAAALAIE
Trigger: TTCTATGGCGAGGGCTGCAGCCACCGCTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp CAGCCCGCGTTGCAGCGCGTACACTTGCCGGTGACATaGTTACAGGCATGCCCGTCGCGGCATGGCGGACAG +
Preference number: 6 (lower is better)
Translates to: QPALQRVHLPVT*LQACPSRHGGQ
Trigger: CTGTCCGCCATGCCGCGACGGGCATGCCTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp GTTGCCTTCGCACACCGCAATCCCACACTCGTCCCCTaGCTGCCTCCAGCCAGCGCAGCACGTGGGCACCTG +
Preference number: 6 (lower is better)
Translates to: VAFAHRNPTLVP*LPPASAARGHL
Trigger: CAGGTGCCCACGTGCTGCGCTGGCTGGAGGCAGCAAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp GTCCGGGGGCTGCCGTGTTCGACCGTATGCGCCGATTaGTCGCTGGGCGTCCGTTTCCTCTTGCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: VRGLPCSTVCAD*SLGVRFLLLGL
Trigger: CAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACAAATCGGCGCATACGGTCGAACACGGCAGCCCCCGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp CCTTGCGCTGGTTGGTTTCTAGGTGGCAGGCACCAGTaGCCGGGTCGCACGTGTCCTCGTGGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PCAGWFLGGRHQ*PGRTCPRGSCR
Trigger: CCTGCAGCTGCCACGAGGACACGTGCGACCCGGTCACTGGTGCCTGCCACCTAGAAACCAACCAGCGCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494535.1
ENST00000622235.5
ENST00000623402.1
CDS TCA 72 bp GCGGCACTCGCCAGGCCTCACGCACACCTCGTTCTCTaGGCACGTGGAGTTGCCTTCGCACACCGCAATCCC +
Preference number: 6 (lower is better)
Translates to: AALARPHAHLVL*ARGVAFAHRNP
Trigger: GGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGCCTGGCGAGTGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp GACAGCGGTGGCTGCAGCCCTCGCCATAGAAACCGGTaGCGCAAGGCTGGTCGCACTTGGTTCCGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: DSGGCSPRHRNR*RKAGRTWFRSS
Trigger: GCTGGAACGGAACCAAGTGCGACCAGCCTTGCGCCACCGGTTTCTATGGCGAGGGCTGCAGCCACCGCTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp CGCACACGAAGGCGCAGTCCTCGCCGTAAGTGCCATTaGTACACTTGGTCTCGCACCGGTCGCCGATCCAGC +
Preference number: 6 (lower is better)
Translates to: RTRRRSPRRKCH*YTWSRTGRRSS
Trigger: GCTGGATCGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCACTTACGGCGAGGACTGCGCCTTCGTGTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp AGTCGGCGCACACGAAGGCGCAGTCCTCGCCGTAAGTaGCATTGCTACACTTGGTCTCGCACCGGTCGCCGA +
Preference number: 6 (lower is better)
Translates to: SRRTRRRSPRRK*HCYTWSRTGRR
Trigger: TCGGCGACCGGTGCGAGACCAAGTGTAGCAATGGCACTTACGGCGAGGACTGCGCCTTCGTGTGCGCCGACT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp CACTTGGTCTCGCACCGGTCGCCGATCCAGCCCGCGTaGCAGCGCGTACACTTGCCGGTGACATGGTTACAG +
Preference number: 6 (lower is better)
Translates to: HLVSHRSPIQPA*QRVHLPVTWLQ
Trigger: CTGTAACCATGTCACCGGCAAGTGTACGCGCTGCAACGCGGGCTGGATCGGCGACCGGTGCGAGACCAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp TTCATGCTGATGCGACTGAAGCGCCCGCATAGTCGGTaGGGCGCCTTCTTCCTCCCAAGCGAAAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: FMLMRLKRPHSR*GAFFLPSESSR
Trigger: CCGGGAGCTTTCGCTTGGGAGGAAGAAGGCGCCGCACCGACTATGCGGGCGCTTCAGTCGCATCAGCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494535.1
ENST00000622235.5
CDS GCA 72 bp AGGTCGTGGTGGGCCACTACGACTTTGGGTAGTTTCTaGCTCCGGAGCGGGATCCGGGGCAGCTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: RSWWATTTLGSF*LRSGIRGSFML
Trigger: CAGCATGAAGCTGCCCCGGATCCCGCTCCGGAGGCAGAAACTACCCAAAGTCGTAGTGGCCCACCACGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494535.1
ENST00000622235.5
ENST00000623402.1
CDS CCA 72 bp CGCCAGGCCTCACGCACACCTCGTTCTCTGAGCACGTaGAGTTGCCTTCGCACACCGCAATCCCACACTCGT +
Preference number: 6 (lower is better)
Translates to: RQASRTPRSLST*SCLRTPQSHTR
Trigger: ACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGCCTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS CAA 72 bp GGCCTCACGCACACCTCGTTCTCTGAGCACGTGGAGTaGCCTTCGCACACCGCAATCCCACACTCGTCCCCT +
Preference number: 6 (lower is better)
Translates to: GLTHTSFSEHVE*PSHTAIPHSSP
Trigger: AGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp GCCTCACGCACACCTCGTTCTCTGAGCACGTGGAGTTaGCTTCGCACACCGCAATCCCACACTCGTCCCCTT +
Preference number: 6 (lower is better)
Translates to: ASRTPRSLSTWS*LRTPQSHTRPL
Trigger: AAGGGGACGAGTGTGGGATTGCGGTGTGCGAAGGCAACTCCACGTGCTCAGAGAACGAGGTGTGCGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622235.5
ENST00000623402.1
CDS GCA 72 bp TTCATGCTGATGCGACTGAAGCGCCCGCATAGTCGGTaGGGCGCCTTCTTCCTCCCAAGCGAAAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: FMLMRLKRPHSR*GAFFLPSESSL
Trigger: CAGGGAGCTTTCGCTTGGGAGGAAGAAGGCGCCGCACCGACTATGCGGGCGCTTCAGTCGCATCAGCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623402.1
CDS CCA 72 bp CCTCATGGGGTACACAGTACACAGGGCCTTCATCAGTaGTGTCAAACGAGGAGAAGGAGGCCCGAGAGGACC +
Preference number: 6 (lower is better)
Translates to: PHGVHSTQGLHQ*CQTRRRRPERT
Trigger: GGTCCTCTCGGGCCTCCTTCTCCTCGTTTGACACCACTGATGAAGGCCCTGTGTACTGTGTACCCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494535.1
ENST00000622235.5
ENST00000623402.1