RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCARA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168079

Ensembl transcript IDs: ENST00000354914.8, ENST00000380385.6, ENST00000518030.1, ENST00000524352.5

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAG +
Preference number: 1 (lower is better)
Translates to: KREMTTGPHGPGMQV*GLRMLDGVWSRHGQ
Trigger: CTGACCATGCCTCGACCACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTaGGATGCAGGTGTGAGGACTGAGAATGCTGGACGGGGTGTGGTC +
Preference number: 1 (lower is better)
Translates to: GAHVQEGNDDRPPRS*DAGVRTENAGRGVV
Trigger: GACCACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp TGGGCAGCCCCCATGTCACCCTCCACATCAGCTCTCCTCCTACATTaGTGGTCGGCCTGGAAGCCAGTCATGTTTGACCTTGCACTCACG +
Preference number: 1 (lower is better)
Translates to: WAAPMSPSTSALLLH*WSAWKPVMFDLALT
Trigger: CGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGCTGATGTGGAGGGTGACATGGGGGCTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 90 bp GTTCCTACACCTGGAGGGGCCCAGGTCTCTCCCCAAGCAGGCCAGTaGTCACCTGATATGACAGGTGATCGTGTATCTGAGGCCTATGAG +
Preference number: 1 (lower is better)
Translates to: VPTPGGAQVSPQAGQ*SPDMTGDRVSEAYE
Trigger: CTCATAGGCCTCAGATACACGATCACCTGTCATATCAGGTGAGCACTGGCCTGCTTGGGGAGAGACCTGGGCCCCTCCAGGTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp GAGGGGCCCAGGTCTCTCCCCAAGCAGGCCAGTGCTCACCTGATATaGCAGGTGATCGTGTATCTGAGGCCTATGAGTTTGAGATTCCCC +
Preference number: 1 (lower is better)
Translates to: EGPRSLPKQASAHLI*QVIVYLRPMSLRFP
Trigger: GGGGAATCTCAAACTCATAGGCCTCAGATACACGATCACCTGTCATATCAGGTGAGCACTGGCCTGCTTGGGGAGAGACCTGGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp ATGAGAACACTGAGGCACAGAGATTATACCAGCTGGGCTAGCGAGTaGCCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTT +
Preference number: 1 (lower is better)
Translates to: MRTLRHRDYTSWASE*PGEASRSMHTTARF
Trigger: AAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAGCCCAGCTGGTATAATCTCTGTGCCTCAGTGTTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CCA 90 bp GGCAAAGTGGTGATCCAGTTGATCAGGGCTCCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGCAGTAGGTCCCAGAGTTATACTTCG +
Preference number: 1 (lower is better)
Translates to: GKVVIQLIRAPHAGT*WKRETGSRSQSYTS
Trigger: CGAAGTATAACTCTGGGACCTACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATCAACTGGATCACCACTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 90 bp AAAGTGGTGATCCAGTTGATCAGGGCTCCTCATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAG +
Preference number: 1 (lower is better)
Translates to: KVVIQLIRAPHAGTW*KRETGSRSQSYTSE
Trigger: CTCCGAAGTATAACTCTGGGACCTACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATCAACTGGATCACCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 90 bp GTAACTAAAAGGCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATaGTGTTCAGAGGCTGGGCAAAGTGGTGATCCAGTTGATCAGGGC +
Preference number: 1 (lower is better)
Translates to: VTKRPKGTGILRPGA*CSEAGQSGDPVDQG
Trigger: GCCCTGATCAACTGGATCACCACTTTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGCCTTTTAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp TGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTaGAGTAGGCAACTTTCTAGTTACACAGGTCCTGCACCCAAGCTT +
Preference number: 1 (lower is better)
Translates to: WKPVMFDLALTPWRF*SRQLSSYTGPAPKL
Trigger: AAGCTTGGGTGCAGGACCTGTGTAACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp AGGTGGGTCTGCACTCACTTGCTACCAGGTAGCTCCCCTAGTTCTTaGACATGTGTATGGCCCAGTTCTGCTCCTCATGTAAAAAGCAGA +
Preference number: 1 (lower is better)
Translates to: RWVCTHLLPGSSPSS*TCVWPSSAPHVKSR
Trigger: TCTGCTTTTTACATGAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 90 bp GTTTCATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTACAGCTGGCTTCTCCTCTATGTCAC +
Preference number: 1 (lower is better)
Translates to: VSFPSPNLAGFLQVT*ISLLPLQLASPLCH
Trigger: GTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 90 bp AGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTaGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACCTGGAG +
Preference number: 1 (lower is better)
Translates to: RSGKHIGSKNDLGPY*LSCQPGVLLFLHLE
Trigger: CTCCAGGTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp CTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATaGCTTGGCTTTAACCGTGACTGCCCAATGCCAGAGCACTGGACT +
Preference number: 1 (lower is better)
Translates to: LGRCKIITSKQLRHT*LGFNRDCPMPEHWT
Trigger: AGTCCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 90 bp AGACTTATGTTGTCCCTAATGGAAAGACCAAGTAAGAGAGTTATGTaGGTCTTCATGGAAGGGATAACTGGATTCTTTGCCAGAACCGGG +
Preference number: 1 (lower is better)
Translates to: RLMLSLMERPSKRVM*VFMEGITGFFARTG
Trigger: CCCGGTTCTGGCAAAGAATCCAGTTATCCCTTCCATGAAGACGCACATAACTCTCTTACTTGGTCTTTCCATTAGGGACAACATAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
3UTR TCA 90 bp GGAAGATGTAGAAACTCTTGGACTAATGGAGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATACTACCAACCATCGCTGCTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: GRCRNSWTNGGLGIV*RVNDLYYQPSLLLH
Trigger: GTGCAGCAGCAGCGATGGTTGGTAGTATAGATCATTTACTCTTCAGACAATTCCCAAACCTCCATTAGTCCAAGAGTTTCTACATCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 90 bp GGCAAGGGATGCATGAGTACATGCGTGTTATGTAAACATAGCAATTaGTCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: GKGCMSTCVLCKHSN*SEREFLIIRTFKEW
Trigger: CCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGACCAATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 90 bp TATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATaGGTGTTATGTAAACATAGCAATTGGTCAGAAAGAGAGTTTCTC +
Preference number: 1 (lower is better)
Translates to: YMHTYMGSGKGCMST*VLCKHSNWSEREFL
Trigger: GAGAAACTCTCTTTCTGACCAATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 90 bp TATGTTTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATaGGTACATGCGTGTTATGTAAACATAGCAATTGGTCAGAAAGAG +
Preference number: 1 (lower is better)
Translates to: YVYICIHIWALARDA*VHACYVNIAIGQKE
Trigger: CTCTTTCTGACCAATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAAACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAGGTGTGGTCGAGGCATaGTCAGGGTGGCCCCGAGCT +
Preference number: 2 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAGVVEA*SGWPRA
Trigger: AGCTCGGGGCCACCCTGACCATGCCTCGACCACACC...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCGAGGCATGGTCAGGGTaGCCCCGAGCTGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPEAWSG*PRAVPH
Trigger: GTGGGGCACAGCTCGGGGCCACCCTGACCATGCCTC...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATGTTCAAGAGGGAAATaGCGACCGGCCCCCACGGTC +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTCSRGK*RPAPTV
Trigger: GACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACA...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCGGTGTGGTCGAGGCATaGTCAGGGTGGCCCCGAGCT +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPGVVEA*SGWPRA
Trigger: AGCTCGGGGCCACCCTGACCATGCCTCGACCACACC...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACACCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGC +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTPHAGT*WKRETG
Trigger: GCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGG...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTACATGGCTCCAGCCTCTaGACCTCCAAACTTATGGGG +
Preference number: 2 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLHGSSL*TSKLMG
Trigger: CCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATG...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR-3UTR GCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCAGGAAGGGTGCTCTGTaGAGGACCCCGAACTTGGGC +
Preference number: 2 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTRKGAL*RTPNLG
Trigger: GCCCAAGTTCGGGGTCCTGCACAGAGCACCCTTCCT...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCGCCCCACCCCAGGGATaGAGGAAGGGTGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLAPPQG*RKGALC
Trigger: GCACAGAGCACCCTTCCTGCATCCCTGGGGTGGGGC...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCTGCAGGTGTGAGGACTaGGAATGCTGGACGGGGTGT +
Preference number: 2 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTCRCED*ECWTGC
Trigger: ACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCA...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGAC +
Preference number: 2 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTPGMQV*GLRMLD
Trigger: GTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGG...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGGGAAATTCATCACTTaGCGTTGCCTCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTGKFIT*RCLLLG
Trigger: CCCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAGCCCCACCCCAGGGATaGAGGAAGGGTGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKAPPQG*RKGALC
Trigger: GCACAGAGCACCCTTCCTGCATCCCTGGGGTGGGGC...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCACCGTGACTGCCCAATaGCAGAGCACTGGACTCAGG +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPTVTAQ*QSTGLR
Trigger: CCTGAGTCCAGTGCTCTGGCATTGGGCAGTCACGGT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCACATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWAHAGTW*KRETGS
Trigger: ACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATG...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAAAGGCCAAAGGGAACTaGGATATTGAGGCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTKAKGN*DIEAWC
Trigger: GCACCAGGCCTCAATATCCCAGTTCCCTTTGGCCTT...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 90 bp AAGAATGACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTaGCTGTTCCTACACCTGGAGGGGCCCAGGTCTCTCCCCAAGCAG +
Preference number: 2 (lower is better)
Translates to: KNDLGPYWLSCQPGV*LFLHLEGPRSLPKQ
Trigger: CTGCTTGGGGAGAGACCTGGGCCCCTCCAGGTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGTAGGGAGCCTCCTTTaGCACTTGAGCCCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPVGSLL*HLSPSH
Trigger: ATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTAC...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTA +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTFLQVT*ISLLPL
Trigger: TAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAA...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCTTGAGGCCTGGTGCATaGTGTTCAGAGGCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPLRPGA*CSEAGQ
Trigger: TTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAA...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCGACTCAGGTTTAACATaGGCAGCCCCCATGTCACCC +
Preference number: 2 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTDSGLT*AAPMSP
Trigger: GGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTC...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCACGCCCTGGAGGTTCTaGAGTAGGCAACTTTCTAGT +
Preference number: 2 (lower is better)
Translates to: STGLRFNMGSPHVTLHISTPWRF*SRQLSS
Trigger: ACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGT...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCGCTCTCCTCCTACATTaGTGGTCGGCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLALLLH*WSAWKP
Trigger: TGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGC...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGCCTCCTTTGACACTTaGGCCCCAGCCATGGCTCCA +
Preference number: 2 (lower is better)
Translates to: SRSMHTTARFMTPLEMWPASFDT*APAMAP
Trigger: TGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGC...TGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR-3UTR CCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAATGCTGGACGGGGTGTaGTCGAGGCATGGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKMLDGV*SRHGQG
Trigger: ACCCTGACCATGCCTCGACCACACCCCGTCCAGCAT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCATGGGATATTGAGGCCTaGTGCATGGTGTTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSWDIEA*CMVFRG
Trigger: GCCTCTGAACACCATGCACCAGGCCTCAATATCCCA...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCAGACTGACATGCCCTaGACCAATGCAGCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPQTDMP*TNAAKW
Trigger: CCACTTAGCTGCATTGGTCCAGGGCATGTCAGTCTG...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 90 bp CAGCTCTCCTCCTACATTGATGGTCGGCCTGGAAGCCAGTCATGTTaGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTT +
Preference number: 2 (lower is better)
Translates to: QLSSYIDGRPGSQSC*TLHSRPGGSEVGNF
Trigger: AAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCACGCCCTGGAGGTTCTaGAGTAGGCAACTTTCTAGT +
Preference number: 2 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPTPWRF*SRQLSS
Trigger: ACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTAGGAAGGGTGCTCTGTaGAGGACCCCGAACTTGGGC +
Preference number: 2 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVRKGAL*RTPNLG
Trigger: GCCCAAGTTCGGGGTCCTGCACAGAGCACCCTTCCT...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACGATCAGGGCTCCTCATaGAGGAACCTGGTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHDQGSS*RNLVEE
Trigger: CTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATC...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGGAGGCATGGTCAGGGTaGCCCCGAGCTGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVEAWSG*PRAVPH
Trigger: GTGGGGCACAGCTCGGGGCCACCCTGACCATGCCTC...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAGAAGCCAGTCATGTTTaGCCTTGCACTCACGCCCTG +
Preference number: 2 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGEASHV*PCTHAL
Trigger: CAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTC...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCGCTCTCCTCCTACATTaGTGGTCGGCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCALLLH*WSAWKP
Trigger: TGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGC...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTATTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTA +
Preference number: 2 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVFLQVT*ISLLPL
Trigger: TAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAA...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 90 bp TCCTCCTACATTGATGGTCGGCCTGGAAGCCAGTCATGTTTGACCTaGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: SSYIDGRPGSQSCLT*HSRPGGSEVGNFLV
Trigger: AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGGCCGACCATCAATGTAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCCCACAGATTCACACCTaGAGAGGCTTGGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLPQIHT*RGLEDA
Trigger: TGCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGG...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCCTTGACGTTGCCTCTTaGTGGGGAGGAAGATGTAGA +
Preference number: 2 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLLDVAS*WGGRCR
Trigger: TCTACATCTTCCTCCCCAGCAAGAGGCAACGTCAAG...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATTTTGTCTTCTTACTTaGAGTCTAGGTGAATGGACC +
Preference number: 2 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTFCLLT*SLGEWT
Trigger: GGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAA...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACTCTTGCCCCTACAGCTaGCTTCTCCTCTATGTCACT +
Preference number: 2 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHSCPYS*LLLYVT
Trigger: AGTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGA...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTGCAGGTGTGAGGACTaGGAATGCTGGACGGGGTGT +
Preference number: 2 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSCRCED*ECWTGC
Trigger: ACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGAC +
Preference number: 2 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMPGMQV*GLRMLD
Trigger: GTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGG...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACGGGAAATTCATCACTTaGCGTTGCCTCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHGKFIT*RCLLLG
Trigger: CCCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCC...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGGCTTTAACCGTGACTaGCCAATGCCAGAGCACTGG +
Preference number: 2 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTGFNRD*PMPEHW
Trigger: CCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGC +
Preference number: 2 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCPHAGT*WKRETG
Trigger: GCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGG...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGACTCAGGTTTAACATaGGCAGCCCCCATGTCACCC +
Preference number: 2 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTDSGLT*AAPMSP
Trigger: GGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 90 bp TCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTaGCCCCTACAGCTGGCTTCTCCTCTATGTCACTTCCTCAAACTA +
Preference number: 2 (lower is better)
Translates to: SPNLAGFLQVTCISL*PLQLASPLCHFLKL
Trigger: TAGTTTGAGGAAGTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCTCACCTCCAAACAGCTaGGACACACATGACTTGGCT +
Preference number: 2 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCSPPNS*DTHDLA
Trigger: AGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGA...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTGTATCCAGACTGACATaGCCTGGACCAATGCAGCTA +
Preference number: 2 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVVSRLT*PGPMQL
Trigger: TAGCTGCATTGGTCCAGGGCATGTCAGTCTGGATAC...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTGGCTTTAACCGTGACTaGCCAATGCCAGAGCACTGG +
Preference number: 2 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLGFNRD*PMPEHW
Trigger: CCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCC...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGGGTCTGCACTCACTTaGTACCAGGTAGCTCCCCTA +
Preference number: 2 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMGSALT*YQVAPL
Trigger: TAGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGTCAGCCAGGAGTGTTaGTGTTCCTACACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCVSQEC*CSYTWR
Trigger: CCTCCAGGTGTAGGAACAGCAACACTCCTGGCTGAC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTTCCCCCAAGGTGAGGTaGGTCTGCACTCACTTGCTA +
Preference number: 2 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCSPKVR*VCTHLL
Trigger: TAGCAAGTGAGTGCAGACCCACCTCACCTTGGGGGA...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGGAGATTCCCCCAAGGTaGGGTGGGTCTGCACTCACT +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKEIPPR*GGSALT
Trigger: AGTGAGTGCAGACCCACCTCACCTTGGGGGAATCTC...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCTTGCATTTCCCTCTTaGCCCTACAGCTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSLAFPS*PYSWLL
Trigger: GAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTGGGATATTGAGGCCTaGTGCATGGTGTTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCWDIEA*CMVFRG
Trigger: GCCTCTGAACACCATGCACCAGGCCTCAATATCCCA...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGATTCTCCAAATCTAGCTaGATTCCTGCAGGTGACTTG +
Preference number: 2 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGFSKSS*IPAGDL
Trigger: CAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAA...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTCAGACTGACATGCCCTaGACCAATGCAGCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLQTDMP*TNAAKW
Trigger: CCACTTAGCTGCATTGGTCCAGGGCATGTCAGTCTG...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGAGGGAACTGGGATATTaGGGCCTGGTGCATGGTGTT +
Preference number: 2 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVRELGY*GLVHGV
Trigger: AACACCATGCACCAGGCCTCAATATCCCAGTTCCCT...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTATGTCTGAAGAGTAAATaGTCTATACTACCAACCATC +
Preference number: 2 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVCLKSK*SILPTI
Trigger: GATGGTTGGTAGTATAGATCATTTACTCTTCAGACA...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTAATGGACCAGTTAAGTaGTACCTGGAGGTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTNGPVK*YLEVRL
Trigger: CAGCCTTACCTCCAGGTAGCACTTAACTGGTCCATT...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGCATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKHAGTW*KRETGS
Trigger: ACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATG...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGTTGAGGCCTGGTGCATaGTGTTCAGAGGCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKLRPGA*CSEAGQ
Trigger: TTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAA...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGATACTTGCAGTCTAGGTaGATGGACCAGTTAAGTGCT +
Preference number: 2 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGYLQSR*MDQLSA
Trigger: AGCACTTAACTGGTCCATTCACCTAGACTGCAAGTA...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTCACCTCCAAACAGCTaGGACACACATGACTTGGCT +
Preference number: 2 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVSPPNS*DTHDLA
Trigger: AGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGA...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAATGGACCAGTTAAGTaGTACCTGGAGGTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLNGPVK*YLEVRL
Trigger: CAGCCTTACCTCCAGGTAGCACTTAACTGGTCCATT...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGCCCCAAGCAGGCCAGTaGTCACCTGATATGACAGGT +
Preference number: 2 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWPQAGQ*SPDMTG
Trigger: ACCTGTCATATCAGGTGAGCACTGGCCTGCTTGGGG...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAAGATGTAGAAACTCTTaGACTAATGGAGGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGRCRNS*TNGGLG
Trigger: TCCCAAACCTCCATTAGTCCAAGAGTTTCTACATCT...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAGGGAACTGGGATATTaGGGCCTGGTGCATGGTGTT +
Preference number: 2 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWRELGY*GLVHGV
Trigger: AACACCATGCACCAGGCCTCAATATCCCAGTTCCCT...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGCAGCTGAGACACACATaGCTTGGCTTTAACCGTGAC +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKQLRHT*LGFNRD
Trigger: GTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTG...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGCTTGCATTTCCCTCTTaGCCCTACAGCTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWLAFPS*PYSWLL
Trigger: GAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAG...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGAGATGTAGAAACTCTTaGACTAATGGAGGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLRCRNS*TNGGLG
Trigger: TCCCAAACCTCCATTAGTCCAAGAGTTTCTACATCT...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTCTCCAAATCTAGCTaGATTCCTGCAGGTGACTTG +
Preference number: 2 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMFSKSS*IPAGDL
Trigger: CAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAACCAATGCAGCTAAGTaGATACATGAATTTGGCACC +
Preference number: 2 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGTNAAK*IHEFGT
Trigger: GGTGCCAAATTCATGTATCCACTTAGCTGCATTGGT...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAGTGCTCACCTGATATaGCAGGTGATCGTGTATCTG +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKSAHLI*QVIVYL
Trigger: CAGATACACGATCACCTGTCATATCAGGTGAGCACT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTTTTTGTCTTCTTACTTaGAGTCTAGGTGAATGGACC +
Preference number: 2 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTFCLLT*SLGEWT
Trigger: GGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAA...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGTCTTGCCCCTACAGCTaGCTTCTCCTCTATGTCACT +
Preference number: 2 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWSCPYS*LLLYVT
Trigger: AGTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGA...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGACAATAAGTTCAGGTaGGCACACGGTCTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLDNKFR*AHGLSH
Trigger: ATGACTGAGACCGTGTGCCCACCTGAACTTATTGTC...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGTCTGAAGAGTAAATaGTCTATACTACCAACCATC +
Preference number: 2 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMCLKSK*SILPTI
Trigger: GATGGTTGGTAGTATAGATCATTTACTCTTCAGACA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATAC +
Preference number: 2 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCGLGIV*RVNDLY
Trigger: GTATAGATCATTTACTCTTCAGACAATTCCCAAACC...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR GCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTATGTATGGCCCAGTTCTaGTCCTCATGTAAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLCMAQF*SSCKKQ
Trigger: CTGCTTTTTACATGAGGAGCAGAACTGGGCCATACA...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGACCAATGCAGCTAAGTaGATACATGAATTTGGCACC +
Preference number: 2 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKTNAAK*IHEFGT
Trigger: GGTGCCAAATTCATGTATCCACTTAGCTGCATTGGT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTGTAAACATAGCAATTaGTCAGAAAGAGAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVCKHSN*SEREFL
Trigger: GAGAAACTCTCTTTCTGACCAATTGCTATGTTTACA...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR TCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATAC +
Preference number: 2 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLGLGIV*RVNDLY
Trigger: GTATAGATCATTTACTCTTCAGACAATTCCCAAACC...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp ATGACGACCGGCCCCCACGGTCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGACGGGGTGTGGTCGAGG +
Preference number: 3 (lower is better)
Translates to: MTTGPHGPGMQV*GLRMLDGVWSR
Trigger: CCTCGACCACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGGACCGTGGGGGCCGGTCGTCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp GTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTaGGATGCAGGTGTGAGGACTGAGAATGCTGGACGG +
Preference number: 3 (lower is better)
Translates to: VQEGNDDRPPRS*DAGVRTENAGR
Trigger: CCGTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGGTAGGGAGCCTCCTTaGACACTTGAGCCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLGREPP*TLEPQP
Trigger: TGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR TCA 72 bp CTGAGGCACAGAGATTATACCAGCTGGGCTAGCGAGTaGCCGGGGGAAGCCTCCAGATCCATGCACACAACC +
Preference number: 3 (lower is better)
Translates to: LRHRDYTSWASE*PGEASRSMHTT
Trigger: GGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAGCCCAGCTGGTATAATCTCTGTGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CCA 72 bp CTGCCCAATGCCAGAGCACTGGACTCAGGTTTAACATaGGCAGCCCCCATGTCACCCTCCACATCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: LPNARALDSGLT*AAPMSPSTSAL
Trigger: GAGAGCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGCATTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAAAGGGAACTGGGATATaGAGGCCTGGTGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTKGTGI*RPGAWC
Trigger: ACACCATGCACCAGGCCTCAATATCCCAGTTCCCTT...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGGGGAAATTCATCACTaGACGTTGCCTCTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTGEIHH*TLPLAG
Trigger: CCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCCC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCAGCTCTCCTCCTACATaGATGGTCGGCCTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPSSPPT*MVGLEA
Trigger: GGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGCT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGTCTATCAGCATCTCTaGCTAGACCAGCAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLVYQHL*LDQQSP
Trigger: AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGAC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CCA 72 bp GTGATCCAGTTGATCAGGGCTCCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGCAGTAGGTCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: VIQLIRAPHAGT*WKRETGSRSQS
Trigger: ACTCTGGGACCTACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATCAACTGGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp AGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAATaGCGACCGGCCCCCACGGTCCTGGGATGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: RVILRSTCSRGK*RPAPTVLGCRC
Trigger: ACACCTGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp AAGCAGAACACGATCTCCCTGTCTCTAGGAGGAGGGTaGAGATTGCAGATTTATGGAGGCCCAAGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: KQNTISLSLGGG*RLQIYGGPRPL
Trigger: AAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCCTCCTAGAGACAGGGAGATCGTGTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp ATCCAGTTGATCAGGGCTCCTCATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGTAGGTCCCAGAGTTAT +
Preference number: 3 (lower is better)
Translates to: IQLIRAPHAGTW*KRETGSRSQSY
Trigger: ATAACTCTGGGACCTACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATCAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp CACACAACCGCCAGGTTTATGACACCTCTAGAAATGTaGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGC +
Preference number: 3 (lower is better)
Translates to: HTTARFMTPLEM*PVPLGSISISC
Trigger: GCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR-3UTR CAA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGGGAAATTCATCACTaGACGTTGCCTCTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVGEIHH*TLPLAG
Trigger: CCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCCC...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp CCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTACAGCTGGCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: PSPNLAGFLQVT*ISLLPLQLASP
Trigger: AGGAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp GACACACATGACTTGGCTTTAACCGTGACTGCCCAATaGCAGAGCACTGGACTCAGGTTTAACATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: DTHDLALTVTAQ*QSTGLRFNMGS
Trigger: GCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCCAAGTCATGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACACTTGCATTTCCCTCTaGCCCCTACAGCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHTCISL*PLQLAS
Trigger: AGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGT...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACAAAGTGGTGATCCAGTaGATCAGGGCTCCTCATGCA +
Preference number: 3 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHKVVIQ*IRAPHA
Trigger: TGCATGAGGAGCCCTGATCAACTGGATCACCACTTT...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp GTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTaGAGTAGGCAACTTTCTAGTTACACAGGTCCTGCA +
Preference number: 3 (lower is better)
Translates to: VMFDLALTPWRF*SRQLSSYTGPA
Trigger: TGCAGGACCTGTGTAACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp TGCACTCACTTGCTACCAGGTAGCTCCCCTAGTTCTTaGACATGTGTATGGCCCAGTTCTGCTCCTCATGTA +
Preference number: 3 (lower is better)
Translates to: CTHLLPGSSPSS*TCVWPSSAPHV
Trigger: TACATGAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTAGCAAGTGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp GTGCTACCTGGAGGTAAGGCTGTATCCAGACTGACATaGCCTGGACCAATGCAGCTAAGTGGATACATGAAT +
Preference number: 3 (lower is better)
Translates to: VLPGGKAVSRLT*PGPMQLSGYMN
Trigger: ATTCATGTATCCACTTAGCTGCATTGGTCCAGGGCATGTCAGTCTGGATACAGCCTTACCTCCAGGTAGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATTCATCACTTGACGTaGCCTCTTGCTGGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHIHHLT*PLAGEE
Trigger: TTCCTCCCCAGCAAGAGGCAACGTCAAGTGATGAAT...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGGAAGCCAGTCATGTTaGACCTTGCACTCACGCCCT +
Preference number: 3 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCGSQSC*TLHSRP
Trigger: AGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGGAGGAGGGTGCAGATaGCAGATTTATGGAGGCCCA +
Preference number: 3 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMGGGCR*QIYGGP
Trigger: TGGGCCTCCATAAATCTGCAATCTGCACCCTCCTCC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp TGCAAAATCATCACCTCCAAACAGCTGAGACACACATaGCTTGGCTTTAACCGTGACTGCCCAATGCCAGAG +
Preference number: 3 (lower is better)
Translates to: CKIITSKQLRHT*LGFNRDCPMPE
Trigger: CTCTGGCATTGGGCAGTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp GGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTaGGACACACATGACTTGGCTTTAACCGTGACTGCC +
Preference number: 3 (lower is better)
Translates to: GLEDAKSSPPNS*DTHDLALTVTA
Trigger: GGCAGTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTAAGGGAACTGGGATATaGAGGCCTGGTGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCKGTGI*RPGAWC
Trigger: ACACCATGCACCAGGCCTCAATATCCCAGTTCCCTT...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTTCGCTGCTGCTGCACTaGTCTCTGACACATTCTCAG +
Preference number: 3 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCSLLLH*SLTHSQ
Trigger: CTGAGAATGTGTCAGAGACAAGTGCAGCAGCAGCGA...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGCAGTCATGTTTGACCTaGCACTCACGCCCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVQSCLT*HSRPGG
Trigger: ACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTG...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGCTGAGGCCTATGAGTTaGAGATTCCCCCAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMLRPMS*RFPQGE
Trigger: CTCACCTTGGGGGAATCTCAAACTCATAGGCCTCAG...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAAAGTGGTGATCCAGTaGATCAGGGCTCCTCATGCA +
Preference number: 3 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLKVVIQ*IRAPHA
Trigger: TGCATGAGGAGCCCTGATCAACTGGATCACCACTTT...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTATTCATCACTTGACGTaGCCTCTTGCTGGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSIHHLT*PLAGEE
Trigger: TTCCTCCCCAGCAAGAGGCAACGTCAAGTGATGAAT...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp TGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTaGAAGATGCAAAATCATCACCTCCAAACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: CFPDHRFTPEEA*KMQNHHLQTAE
Trigger: CTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp AAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTaGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTA +
Preference number: 3 (lower is better)
Translates to: KHIGSKNDLGPY*LSCQPGVLLFL
Trigger: TAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CCA 72 bp TTCAATGTTAGTTTCATTCCCTTCTCCAAATCTAGCTaGATTCCTGCAGGTGACTTGCATTTCCCTCTTGCC +
Preference number: 3 (lower is better)
Translates to: FNVSFIPFSKSS*IPAGDLHFPLA
Trigger: GGCAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAATGAAACTAACATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTACGGTCTCAGTCATTTaGTCTTCTTACTTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCTVSVI*SSYLQS
Trigger: AGACTGCAAGTAAGAAGACAAAATGACTGAGACCGT...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTACGGTCTCAGTCATTTaGTCTTCTTACTTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLTVSVI*SSYLQS
Trigger: AGACTGCAAGTAAGAAGACAAAATGACTGAGACCGT...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp TTGTCCCTAATGGAAAGACCAAGTAAGAGAGTTATGTaGGTCTTCATGGAAGGGATAACTGGATTCTTTGCC +
Preference number: 3 (lower is better)
Translates to: LSLMERPSKRVM*VFMEGITGFFA
Trigger: GGCAAAGAATCCAGTTATCCCTTCCATGAAGACGCACATAACTCTCTTACTTGGTCTTTCCATTAGGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
3UTR GCA 72 bp ACATATATGGGCTCTGGCAAGGGATGCATGAGTACATaGGTGTTATGTAAACATAGCAATTGGTCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: TYMGSGKGCMST*VLCKHSNWSER
Trigger: TCTTTCTGACCAATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR-3UTR CAA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTAGTGGATACATGAATTaGGCACCCAAGATACTATTT +
Preference number: 3 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCSGYMN*APKILF
Trigger: AAATAGTATCTTGGGTGCCAAATTCATGTATCCACT...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp AGAAACTCTTGGACTAATGGAGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATACTACCAACCATCGCTG +
Preference number: 3 (lower is better)
Translates to: RNSWTNGGLGIV*RVNDLYYQPSL
Trigger: CAGCGATGGTTGGTAGTATAGATCATTTACTCTTCAGACAATTCCCAAACCTCCATTAGTCCAAGAGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR TCA 72 bp ATATGCATACATATATGGGCTCTGGCAAGGGATGCATaGGTACATGCGTGTTATGTAAACATAGCAATTGGT +
Preference number: 3 (lower is better)
Translates to: ICIHIWALARDA*VHACYVNIAIG
Trigger: ACCAATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR GCA 72 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATaGATGAGTACATGCGTGTTATGTAAACATAGCAAT +
Preference number: 3 (lower is better)
Translates to: LYMHTYMGSGKG*MSTCVLCKHSN
Trigger: ATTGCTATGTTTACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGTCCACGCGGCCCTCGTaGGGACCTGAGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVSTRPS*GPEPFT
Trigger: GGTGAATGGCTCAGGTCCGCACGAGGGCCGCGTGGA...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGGCCCCACCCCAGGGATaGAGGAAGGGTGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVAPPQG*RKGALC
Trigger: GCACAGAGCACCCTTCCTGCATCCCTGGGGTGGGGC...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGGGGCCTCCACGCCACTaGCATCCCCAGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVGPPRH*HPQLCL
Trigger: GAGACAGAGCTGGGGATGCCAGTGGCGTGGAGGCCC...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACATGGCTGCCACCACGCTaGGAGCCAGGCCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTWLPPR*EPGRPS
Trigger: CGAGGGGCGGCCTGGCTCTCAGCGTGGTGGCAGCCA...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGCTCCTCGCCCAGGATaGCCACCCTGCGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLAPRPG*PPCAPA
Trigger: GGCTGGCGCGCAGGGTGGGCATCCTGGGCGAGGAGC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAAGCTCCATGCCTACGTaGGCCAGGCGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDASSMPT*ARRRRR
Trigger: GCGCCGCCTGCGCCTGGCGCACGTAGGCATGGAGCT...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGCCCCCTGATCACCTTTaGGTCCCGGTGGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVPPDHL*VPVALS
Trigger: CGAAAGGGCCACCGGGACCCAAAGGTGATCAGGGGG...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAAGGACAGGCTGTGGTTaGGGCCGCGCAGCACGCCGC +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLRTGCG*GRAARR
Trigger: GCGGCGTGCTGCGCGGCCTCAACCACAGCCTGTCCT...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTTGCGCCGTGTCGCTCTaGTGGCCCGTGCGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSCAVSL*WPVRSR
Trigger: GCGGGACCGCACGGGCCAGCAGAGCGACACGGCGCA...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAAGCCGTGTCGCTCTGCTaGCCCGTGCGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKAVSLC*PVRSRS
Trigger: GCTGCGGGACCGCACGGGCCAGCAGAGCGACACGGC...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGATGCTGGACGGGGTGTaGTCGAGGCATGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVMLDGV*SRHGQG
Trigger: ACCCTGACCATGCCTCGACCACACCCCGTCCAGCAT...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCATGGCTGCCACCACGCTaGGAGCCAGGCCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSWLPPR*EPGRPS
Trigger: CGAGGGGCGGCCTGGCTCTCAGCGTGGTGGCAGCCA...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGCACAGGGGCCACTTCTaGAGGAGGACCAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVHRGHF*RRTRSR
Trigger: TCTTGACCTGGTCCTCCTGCAGAAGTGGCCCCTGTG...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGGCTGGGTACAGCAGATaGTTGCCCGCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVAGYSR*LPAVCD
Trigger: GTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGC...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTCTCCAGCCGCTGCACTaGGCCCGCCAGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSLQPLH*ARQRQQ
Trigger: TTGCTGGCGCTGGCGGGCGCAGTGCAGCGGCTGGAG...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTTCGGTCTGCACCGCCTaGGCCTGCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSSVCTA*ACSPHS
Trigger: GCTGTGGGGGCTGCAGGCGCAGGCGGTGCAGACCGA...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTACCGCCTGCTCGGTCTaGACCGCCTGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSTACSV*TACACS
Trigger: GCTGCAGGCGCAGGCGGTGCAGACCGAGCAGGCGGT...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTAGCAGGGCCACCGCCTaGTCGGTCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGASRATA*SVCTAC
Trigger: GCAGGCGGTGCAGACCGAGCAGGCGGTGGCCCTGCT...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGGTCCTGCAGCCGCGTaGGGTGGAGGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGAGPAAA*GGGPRR
Trigger: ACGACGTGGCCCTCCACCGCACGCGGCTGCAGGACC...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGAGCTCCTGCTTCAGCTaGAGCTCCATGCCTACGTGC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVSSCFS*SSMPTC
Trigger: GCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCT...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCACGCGGAAGCCGAGCATaGGGCACACCACGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDARGSRA*GTPRLR
Trigger: ACGGAGACGTGGTGTGCCGCATGCTCGGCTTCCGCG...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTCTGAGTGCCCCTGGCTaGGGCTGTAGAGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPLSAPG*GCRALS
Trigger: GGACAAGGCTCTACAGCCTCAGCCAGGGGCACTCAG...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGAGGCTGTATCCAGACTaGCATGCCCTGGACCAATGC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVRLYPD*HALDQC
Trigger: GCATTGGTCCAGGGCATGTCAGTCTGGATACAGCCT...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGGTCCTGCAGCCGCGTaGGGTGGAGGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSGPAAA*GGGPRR
Trigger: ACGACGTGGCCCTCCACCGCACGCGGCTGCAGGACC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCAGCACCCGCAGGTCCTaGAGCCGCGTGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPSTRRS*SRVRWR
Trigger: CCTCCACCGCACGCGGCTGCAGGACCTGCGGGTGCT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGGCAGAGTGGGGGTCTaGGCCTGGGGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTGRVGV*AWGTQN
Trigger: ATTCTGGGTCCCCCAGGCCCAGACCCCCACTCTGCC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGGCAGAGTGGGGGTCTaGGCCTGGGGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLGRVGV*AWGTQN
Trigger: ATTCTGGGTCCCCCAGGCCCAGACCCCCACTCTGCC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCACCCACGCATGCCCATTaGTCCTGTGGCCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAPTHAH*SCGPQL
Trigger: AAGCTGGGGGCCACAGGACCAATGGGCATGCGTGGG...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCACCCCCTGATCACCTTTaGGTCCCGGTGGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAPPDHL*VPVALL
Trigger: TAGCAGGGCCACCGGGACCCAAAGGTGATCAGGGGG...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380385.6
CDS-3UTR TCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAGATCAGGAGATGTTCTaGGGAGGCACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDADQEMF*GGTGSS
Trigger: GGAGCTGCCGGTGCCTCCTCAGAACATCTCCTGATC...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTAGCTGGGCTAGCGAGTaGCCGGGGGAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGASWASE*PGEASR
Trigger: TCTGGAGGCTTCCCCCGGTCACTCGCTAGCCCAGCT...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGGTCATAGAAAGGGGCTaGAGGGGCGCCCAGGGACGA +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLVIERG*RGAQGR
Trigger: TCGTCCCTGGGCGCCCCTGCAGCCCCTTTCTATGAC...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTGGCCAGAGAGCTGGCTaGCACCACGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSGQRAG*HHAESQ
Trigger: CTGGCTCTCAGCGTGGTGGCAGCCAGCTCTCTGGCC...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAGCCCCAGGACAGCATaGTTCAGGGCCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLSPRTA*FRADRD
Trigger: GTCCCTGTCGGCCCTGAAGCATGCTGTCCTGGGGCT...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAAGCTTGCAGCGGAGCCTaGAGCAGCCGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKACSGA*SSRSCK
Trigger: CTTGCAGCTGCGGCTGCTGCAGGCTCCGCTGCAAGC...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTCCGTCAGGTCCGCTTaGAGCGGAGCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISSVRSA*SGACSS
Trigger: GCTGCTGCAGGCTCCGCTGCAAGCGGACCTGACGGA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAATCCGTCAGGTCCGCTTaGAGCGGAGCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKSVRSA*SGACSS
Trigger: GCTGCTGCAGGCTCCGCTGCAAGCGGACCTGACGGA...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTAGCACCCGCAGGTCCTaGAGCCGCGTGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPSTRRS*SRVRWR
Trigger: CCTCCACCGCACGCGGCTGCAGGACCTGCGGGTGCT...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGTGTCCTCGCTGGCGTTaGTCACCAGCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLCPRWR*SPAPAG
Trigger: ACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACA...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAAGCTCCATGCCTACGTaGGCCAGGCGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLSSMPT*ARRRRR
Trigger: GCGCCGCCTGCGCCTGGCGCACGTAGGCATGGAGCT...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp AACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATTCCAGCAGGCCCGCGTaGCGCCTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NRQVYDTSRNVASAPGVYSSRPA*RLSSSW
Trigger: CCAGCTGCTGCTGAGGCGCCACGCGGGCCTGCTGGA...ATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGGCCCGGGCAATCCTaGGGTACCTCTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVGPGQS*GTSLPG
Trigger: CCCGGGGAGAGAGGTACCCCAGGATTGCCCGGGCCC...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGGGCCCGGGCAATCCTaGGGTACCTCTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPGPGQS*GTSLPG
Trigger: CCCGGGGAGAGAGGTACCCCAGGATTGCCCGGGCCC...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTCCCATCATCGCCCTTaGGCCCGGGCAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISSHHRP*ARAILG
Trigger: CCCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTTCCCATCATCGCCCTTaGGCCCGGGCAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGASHHRP*ARAILG
Trigger: CCCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGA...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACACCCACGCATGCCCATTaGTCCTGTGGCCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTPTHAH*SCGPQL
Trigger: AAGCTGGGGGCCACAGGACCAATGGGCATGCGTGGG...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTCTTGAGCCCCAGCCATaGCTCCAGCCTCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPLEPQP*LQPLNL
Trigger: GAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAG...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCCGCCAGCAACGAGTCTaGCTGGTTCTGCAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISRQQRV*LVLQRV
Trigger: GACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCG...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGATGCGAACTGCAGCTaGTCTCGCCGCCAGTCCGTA +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTDANCS*SRRQSV
Trigger: TACGGACTGGCGGCGAGAGCAGCTGCAGTTCGCATC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTGCTGGGTACAGCAGATaGTTGCCCGCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPAGYSR*LPAVCD
Trigger: GTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGC...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGGTCGTCAGGGGAGCTaGGCGGCCTGGACACTGCTA +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSGRQGS*AAWTLL
Trigger: TAGCAGTGTCCAGGCCGCGCAGCTCCCCTGACGACC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACATTCTGCAGCGCGTCCTaGACCTTCCACACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTFCSAS*TFHTCS
Trigger: GGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAA...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCGCTCTGCTGGCCCGTaGGGTCCCGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSMHTTARFMTPLEMWPVRSAGP*GPAAGP
Trigger: TGGCCCTGCTGCGGGACCGCACGGGCCAGCAGAGCG...CACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAGCTCCTGCTTCAGCTaGAGCTCCATGCCTACGTGC +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPSSCFS*SSMPTC
Trigger: GCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCT...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAGGAGATGTTCCGCAGTaGGATGGAGTGCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAGDVPQ*DGVLPV
Trigger: GACTGGGAGCACTCCATCGCACTGCGGAACATCTCC...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTGGAGATGTTCCGCAGTaGGATGGAGTGCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPGDVPQ*DGVLPV
Trigger: GACTGGGAGCACTCCATCGCACTGCGGAACATCTCC...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGCCCGAATCGAGCTGTaGGGTACACCTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTARIEL*GTPPPH
Trigger: GTGTGGAGGAGGTGTACCGCACAGCTCGATTCGGGC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGCTTGACGTTGCCTCTTaGTGGGGAGGAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVLDVAS*WGGRCR
Trigger: TCTACATCTTCCTCCCCAGCAAGAGGCAACGTCAAG...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTGGACAGCTAGCCCTGTaGCAACACCATATCCCACGG +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPGQLAL*QHHIPR
Trigger: CCGTGGGATATGGTGTTGGCACAGGGCTAGCTGTCC...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACACCTGTCCTTGGTGCCTaGTCCTGGGTAGCGATCAGG +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTPVLGA*SWVAIR
Trigger: CCTGATCGCTACCCAGGACCAGGCACCAAGGACAGG...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGGCGCGTGTCCTCGCTaGCGTTGCTCACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLGACPR*RCSPAP
Trigger: GGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCC...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGACCTTTGGGTCCCGGTaGCCCTTTCGCGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLTFGSR*PFREGD
Trigger: ATCTCCCTCGCGAAAGGGCCACCGGGACCCAAAGGT...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTCCCCCTGATCACCTTTaGGTCCCGGTGGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSPPDHL*VPVALS
Trigger: CGAAAGGGCCACCGGGACCCAAAGGTGATCAGGGGG...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGTCTTGCCCCTACAGCTaGCTTCTCCTCTATGTCACT +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVSCPYS*LLLYVT
Trigger: AGTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGA...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGGACCTAGGGCCATATTaGCTTAGTTGTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVDLGPY*LSCQPG
Trigger: TCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCGATCAGGAGATGTTCTaGGGAGGCACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISDQEMF*GGTGSS
Trigger: GGAGCTGCCGGTGCCTCCTCAGAACATCTCCTGATC...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCTGGCTGCCACCACGCTaGGAGCCAGGCCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCWLPPR*EPGRPS
Trigger: CGAGGGGCGGCCTGGCTCTCAGCGTGGTGGCAGCCA...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCAGGCCTCGGTCACCTTTaGACCCACGCATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWAGLGHL*THACPL
Trigger: CAATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCC...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAAGGCCTCGGTCACCTTTaGACCCACGCATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKGLGHL*THACPL
Trigger: CAATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCC...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTGTTCAAGAGGGAAATaGCGACCGGCCCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISCSRGK*RPAPTV
Trigger: GACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGCTCTCCTCCTACATTaGTGGTCGGCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTALLLH*WSAWKP
Trigger: TGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCCTCCTTTGACACTTaGGCCCCAGCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGAASFDT*APAMAP
Trigger: TGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGC...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGTAGGGAGCCTCCTTTaGCACTTGAGCCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLVGSLL*HLSPSH
Trigger: ATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTAC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAACTCCCTGTCCTTGGTaGCTGGTCCTGGGTAGCGAT +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLTPCPW*LVLGSD
Trigger: ATCGCTACCCAGGACCAGGCACCAAGGACAGGGAGT...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTGGTACAGCAGATGCTTaGCCGCCGTTTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPGTADA*PPFVTW
Trigger: CCATGTCACAAACGGCGGGCAAGCATCTGCTGTACC...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTTGCAGCAGCCGCAGCTaGAAGTCCCGGAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSCSSRS*KSRKLS
Trigger: TGAGAGCTTCCGGGACTTGCAGCTGCGGCTGCTGCA...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTTGCACCTTCCACACCTaGTCCGTCAGGTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSCTFHT*SVRSAC
Trigger: GCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCA...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACAGAGTCTGACTGGTTCTaGAGCGCGTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTESDWF*SASCTF
Trigger: GAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTC...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTTCTCAGCATTTGCCATaGTGGCCAGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPSQHLP*WPESWL
Trigger: CAGCCAGCTCTCTGGCCACCATGGCAAATGCTGAGA...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAACGCCTCAGCAGCAGCTaGCTACTGTTGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKRLSSS*LLLLST
Trigger: GGTGGAGAGCAACAGTAGCCAGCTGCTGCTGAGGCG...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCCCCACGCATGCCCATTaGTCCTGTGGCCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTPTHAH*SCGPQL
Trigger: AAGCTGGGGGCCACAGGACCAATGGGCATGCGTGGG...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGTGTGGTCGAGGCATaGTCAGGGTGGCCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVGVVEA*SGWPRA
Trigger: AGCTCGGGGCCACCCTGACCATGCCTCGACCACACC...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAACACCCTGCAACAGCTaGGTGCCCCTGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVTPCNS*VPLAEA
Trigger: AGCCTCAGCCAGGGGCACTCAGCTGTTGCAGGGTGT...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTACGCCAGCAACGAGTCTaGCTGGTTCTGCAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLRQQRV*LVLQRV
Trigger: GACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCG...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCAGGACAGGCTGTGGTTaGGGCCGCGCAGCACGCCGC +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCRTGCG*GRAARR
Trigger: GCGGCGTGCTGCGCGGCCTCAACCACAGCCTGTCCT...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGTTTCCTTCATCCCCCTaGTCACCTTTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLFPSSP*SPLGPG
Trigger: ACCGGGACCCAAAGGTGATCAGGGGGATGAAGGAAA...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCATGCAGGTGTGAGGACTaGGAATGCTGGACGGGGTGT +
Preference number: 4 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWACRCED*ECWTGC
Trigger: ACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCA...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCAGAGATTCCCCCAAGGTaGGGTGGGTCTGCACTCACT +
Preference number: 4 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWAEIPPR*GGSALT
Trigger: AGTGAGTGCAGACCCACCTCACCTTGGGGGAATCTC...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGTATTGGAAGCAAGAATaGCCTAGGGCCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVYWKQE*PRAILA
Trigger: AGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATA...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACACATGGCTCCAGCCTCTaGACCTCCAAACTTATGGGG +
Preference number: 4 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTHGSSL*TSKLMG
Trigger: CCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATG...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTCACAGGGGCCACTTCTaGAGGAGGACCAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSHRGHF*RRTRSR
Trigger: TCTTGACCTGGTCCTCCTGCAGAAGTGGCCCCTGTG...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCGCTGGGTACAGCAGATaGTTGCCCGCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISAGYSR*LPAVCD
Trigger: GTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGC...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAAGCCCCAGGACAGCATaGTTCAGGGCCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVSPRTA*FRADRD
Trigger: GTCCCTGTCGGCCCTGAAGCATGCTGTCCTGGGGCT...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATCAGCCGGTTCACATTaGGAGTCAGGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLSAGSH*ESGPSG
Trigger: ACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGA...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTCGCTCTGCTGGCCCGTaGGGTCCCGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLRSAGP*GPAAGP
Trigger: TGGCCCTGCTGCGGGACCGCACGGGCCAGCAGAGCG...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTGCGCCGTGTCGCTCTaGTGGCCCGTGCGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGCAVSL*WPVRSR
Trigger: GCGGGACCGCACGGGCCAGCAGAGCGACACGGCGCA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTTCAGCTGCAGCTCCATaGCTACGTGCGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPSAAAP*LRAPGA
Trigger: TGCGCCTGGCGCACGTAGGCATGGAGCTGCAGCTGA...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCAAGCATGGCCAGCTCCTaGTTCAGCTGCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWASMASS*FSCSSM
Trigger: CATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCT...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAACAGGCAATCCAGGGATaGCAGGCCTGCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKQAIQG*QACLPF
Trigger: GAAAGGAAGGCAGGCCTGGCATCCCTGGATTGCCTG...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACGGCAGAGTGGGGGTCTaGGCCTGGGGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHGRVGV*AWGTQN
Trigger: ATTCTGGGTCCCCCAGGCCCAGACCCCCACTCTGCC...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAGCCGTGTCGCTCTGCTaGCCCGTGCGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGAVSLC*PVRSRS
Trigger: GCTGCGGGACCGCACGGGCCAGCAGAGCGACACGGC...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCACAGACTGACATGCCCTaGACCAATGCAGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAQTDMP*TNAAKW
Trigger: CCACTTAGCTGCATTGGTCCAGGGCATGTCAGTCTG...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGACACCTCTAGAAATGTaGCCAGTGCCCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLTPLEM*PVPLGS
Trigger: AGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGT...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGATCAGGAGATGTTCTaGGGAGGCACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPDQEMF*GGTGSS
Trigger: GGAGCTGCCGGTGCCTCCTCAGAACATCTCCTGATC...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCATCACCTCCAAACAGCTaGGACACACATGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDASPPNS*DTHDLA
Trigger: AGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGA...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCGGTACAGCAGATGCTTaGCCGCCGTTTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISGTADA*PPFVTW
Trigger: CCATGTCACAAACGGCGGGCAAGCATCTGCTGTACC...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGGTCGTCAGGGGAGCTaGGCGGCCTGGACACTGCTA +
Preference number: 4 (lower is better)
Translates to: SRSMHTTARFMTPLEMWPGRQGS*AAWTLL
Trigger: TAGCAGTGTCCAGGCCGCGCAGCTCCCCTGACGACC...TGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCGAGTCTGACTGGTTCTaGAGCGCGTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTESDWF*SASCTF
Trigger: GAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTC...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGCTCCTCGCCCAGGATaGCCACCCTGCGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCAPRPG*PPCAPA
Trigger: GGCTGGCGCGCAGGGTGGGCATCCTGGGCGAGGAGC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCAGGCAATCCAGGGATaGCAGGCCTGCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPQAIQG*QACLPF
Trigger: GAAAGGAAGGCAGGCCTGGCATCCCTGGATTGCCTG...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCAGGCTTTAACCGTGACTaGCCAATGCCAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWAGFNRD*PMPEHW
Trigger: CCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCC...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATGACAGGGACCCCAGCTaGGTACAGCAGATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NRQVYDTSRNVASAPGVYDRDPS*VQQMLA
Trigger: GGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTC...ATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAACCTTTGGGTCCCGGTaGCCCTTTCGCGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVTFGSR*PFREGD
Trigger: ATCTCCCTCGCGAAAGGGCCACCGGGACCCAAAGGT...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTGAGGCATGGTCAGGGTaGCCCCGAGCTGTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVEAWSG*PRAVPH
Trigger: GTGGGGCACAGCTCGGGGCCACCCTGACCATGCCTC...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGACCAATGCAGCTAAGTaGATACATGAATTTGGCACC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVTNAAK*IHEFGT
Trigger: GGTGCCAAATTCATGTATCCACTTAGCTGCATTGGT...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAAGAACCTCCAAACTTATaGGGCTGCTTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKEPPNL*GCLGDS
Trigger: GCTGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTC...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CAA 72 bp CTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTaGCTGTTCCTACACCTGGAGGGGCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGPYWLSCQPGV*LFLHLEGPRSL
Trigger: GAGAGACCTGGGCCCCTCCAGGTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGACACCCTGCAACAGCTaGGTGCCCCTGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSMHTTARFMTPLEMWPVTPCNS*VPLAEA
Trigger: AGCCTCAGCCAGGGGCACTCAGCTGTTGCAGGGTGT...CACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCTTTCCTTCATCCCCCTaGTCACCTTTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPFPSSP*SPLGPG
Trigger: ACCGGGACCCAAAGGTGATCAGGGGGATGAAGGAAA...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTGCCCTCGTGCGGACCTaGGCCATTCACCAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVALVRT*AIHQAD
Trigger: ATCCGCCTGGTGAATGGCTCAGGTCCGCACGAGGGC...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCGGGAAATTCATCACTTaGCGTTGCCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISGKFIT*RCLLLG
Trigger: CCCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCC...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCTCCAGCCGCTGCACTaGGCCCGCCAGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCLQPLH*ARQRQQ
Trigger: TTGCTGGCGCTGGCGGGCGCAGTGCAGCGGCTGGAG...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTTCGGTCTGCACCGCCTaGGCCTGCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLSVCTA*ACSPHS
Trigger: GCTGTGGGGGCTGCAGGCGCAGGCGGTGCAGACCGA...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTAGCAGGGCCACCGCCTaGTCGGTCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCSRATA*SVCTAC
Trigger: GCAGGCGGTGCAGACCGAGCAGGCGGTGGCCCTGCT...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAAGCATGGCCAGCTCCTaGTTCAGCTGCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLSMASS*FSCSSM
Trigger: CATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCT...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTTTCCTCTGTGCCCTTaGAGGCAACGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISFPLCP*RQRHPS
Trigger: GGATGGATGACGTTGCCTGCAAGGGCACAGAGGAAA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGTATCCAGACTGACATaGCCTGGACCAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTVSRLT*PGPMQL
Trigger: TAGCTGCATTGGTCCAGGGCATGTCAGTCTGGATAC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAAATGGACCAGTTAAGTaGTACCTGGAGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDANGPVK*YLEVRL
Trigger: CAGCCTTACCTCCAGGTAGCACTTAACTGGTCCATT...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCACTTGGTGCCTGGTCCTaGGTAGCGATCAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSLGAWS*VAIRRC
Trigger: ACATCTCCTGATCGCTACCCAGGACCAGGCACCAAG...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTACCAGCCAAATCCAGATaGAGTCATAGAAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLPAKSR*SHRKGL
Trigger: CAGCCCCTTTCTATGACTCCATCTGGATTTGGCTGG...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISHTGSA*TGSCHQ
Trigger: TTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTG...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: TGGSLQIHAHNRQVYDTSHTGSA*TGSCHQ
Trigger: TTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTG...AGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTTCCAGCAGGCCCGCGTaGCGCCTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCSSRPA*RLSSSW
Trigger: CCAGCTGCTGCTGAGGCGCCACGCGGGCCTGCTGGA...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGGGCCCGGGCAATCCTaGGGTACCTCTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCGPGQS*GTSLPG
Trigger: CCCGGGGAGAGAGGTACCCCAGGATTGCCCGGGCCC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGGTGTGGTCGAGGCATaGTCAGGGTGGCCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLGVVEA*SGWPRA
Trigger: AGCTCGGGGCCACCCTGACCATGCCTCGACCACACC...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACATGCTGGACGGGGTGTaGTCGAGGCATGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHMLDGV*SRHGQG
Trigger: ACCCTGACCATGCCTCGACCACACCCCGTCCAGCAT...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGACTCAGGTTTAACATaGGCAGCCCCCATGTCACCC +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSDSGLT*AAPMSP
Trigger: GGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGACCTAGGGCCATATTaGCTTAGTTGTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTDLGPY*LSCQPG
Trigger: TCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTACTTATGGGGCTGCTTaGGGGACAGCTAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPTYGAA*GTASPV
Trigger: CACAGGGCTAGCTGTCCCCCAAGCAGCCCCATAAGT...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATAC +
Preference number: 4 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVGLGIV*RVNDLY
Trigger: GTATAGATCATTTACTCTTCAGACAATTCCCAAACC...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCCCACAGATTCACACCTaGAGAGGCTTGGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISPQIHT*RGLEDA
Trigger: TGCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGG...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAGGCCAGAGAGCTGGCTaGCACCACGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGGQRAG*HHAESQ
Trigger: CTGGCTCTCAGCGTGGTGGCAGCCAGCTCTCTGGCC...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGAGCCCCAGGACAGCATaGTTCAGGGCCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLSPRTA*FRADRD
Trigger: GTCCCTGTCGGCCCTGAAGCATGCTGTCCTGGGGCT...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGCTTGCAGCGGAGCCTaGAGCAGCCGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTACSGA*SSRSCK
Trigger: CTTGCAGCTGCGGCTGCTGCAGGCTCCGCTGCAAGC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAATGCACCTTCCACACCTaGTCCGTCAGGTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKCTFHT*SVRSAC
Trigger: GCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCA...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGACCGCCTGCTCGGTCTaGACCGCCTGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVTACSV*TACACS
Trigger: GCTGCAGGCGCAGGCGGTGCAGACCGAGCAGGCGGT...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAATCCTCCCAGTGCCTTaGCCGAATCGAGCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKILPVP*PNRAVR
Trigger: CCGCACAGCTCGATTCGGGCAAGGCACTGGGAGGAT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCAGATGGTTTCCTCTGTaGCCTTGCAGGCAACGTCAT +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISRWFPL*PCRQRH
Trigger: ATGACGTTGCCTGCAAGGGCACAGAGGAAACCATCT...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGGTCTGCACTCACTTaGTACCAGGTAGCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVGSALT*YQVAPL
Trigger: TAGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCC...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCTTGGTGCCTGGTCCTaGGTAGCGATCAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NRQVYDTSRNVASAPGVYLGAWS*VAIRRC
Trigger: ACATCTCCTGATCGCTACCCAGGACCAGGCACCAAG...ATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCCCCAACGCCGGTCGTaGTACACTTCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSPQRRS*YTSTRP
Trigger: GGGCCGCGTGGAAGTGTACCACGACCGGCGTTGGGG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTGAGGCATGGTCAGGGTaGCCCCGAGCTGTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCEAWSG*PRAVPH
Trigger: GTGGGGCACAGCTCGGGGCCACCCTGACCATGCCTC...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTATTGAGGCCTGGTGCATaGTGTTCAGAGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVLRPGA*CSEAGQ
Trigger: TTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAA...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAAAGGCCAAAGGGAACTaGGATATTGAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSKAKGN*DIEAWC
Trigger: GCACCAGGCCTCAATATCCCAGTTCCCTTTGGCCTT...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTTGTGGCCAGTGCCCCTaGGGTCTATCAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPCGQCP*GLSASL
Trigger: AAGAGATGCTGATAGACCCCAGGGGCACTGGCCACA...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CAA 72 bp ATTGATGGTCGGCCTGGAAGCCAGTCATGTTTGACCTaGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: IDGRPGSQSCLT*HSRPGGSEVGN
Trigger: GTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGGCCGACCATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTACACCCTGCAACAGCTaGGTGCCCCTGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGTPCNS*VPLAEA
Trigger: AGCCTCAGCCAGGGGCACTCAGCTGTTGCAGGGTGT...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCCAGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCACTTGCCCGCCGTTTGTaGCATGGACCATCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SRSMHTTARFMTPLEMWPLARRL*HGPSSH
Trigger: GTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAG...TGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCGGCCTCGGTCACCTTTaGACCCACGCATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCGLGHL*THACPL
Trigger: CAATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCC...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTTGTTCAAGAGGGAAATaGCGACCGGCCCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVCSRGK*RPAPTV
Trigger: GACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACA...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTGTCATAGAAAGGGGCTaGAGGGGCGCCCAGGGACGA +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGVIERG*RGAQGR
Trigger: TCGTCCCTGGGCGCCCCTGCAGCCCCTTTCTATGAC...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTGGCCAGAGAGCTGGCTaGCACCACGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLGQRAG*HHAESQ
Trigger: CTGGCTCTCAGCGTGGTGGCAGCCAGCTCTCTGGCC...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCTCAGATCTCAGCATTTaGCATGGTGGCCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTSDLSI*HGGQRA
Trigger: AGCTCTCTGGCCACCATGGCAAATGCTGAGATCTGA...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLAWTGS*HQRNPH
Trigger: GTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGC...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTCGCGGAAGCCGAGCATaGGGCACACCACGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLRGSRA*GTPRLR
Trigger: ACGGAGACGTGGTGTGCCGCATGCTCGGCTTCCGCG...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGCCCGAATCGAGCTGTaGGGTACACCTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLARIEL*GTPPPH
Trigger: GTGTGGAGGAGGTGTACCGCACAGCTCGATTCGGGC...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACAGGAAGGGTGCTCTGTaGAGGACCCCGAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHRKGAL*RTPNLG
Trigger: GCCCAAGTTCGGGGTCCTGCACAGAGCACCCTTCCT...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGCCCCACCCCAGGGATaGAGGAAGGGTGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCAPPQG*RKGALC
Trigger: GCACAGAGCACCCTTCCTGCATCCCTGGGGTGGGGC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTACTTGCATTTCCCTCTTaGCCCTACAGCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVLAFPS*PYSWLL
Trigger: GAGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAG...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACGTCAGCCAGGAGTGTTaGTGTTCCTACACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHVSQEC*CSYTWR
Trigger: CCTCCAGGTGTAGGAACAGCAACACTCCTGGCTGAC...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAGATAACTGGATTCTTTaGCAGAACCGGGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTDNWIL*QNRVGN
Trigger: ATTCCCAACCCGGTTCTGGCAAAGAATCCAGTTATC...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp AGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGAGCAACGAGTCTGACTaGTTCTGCAGCGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSMHTTARFMTPLEMWPVSNESD*FCSASC
Trigger: GCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCT...CACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACCGCCTCAGCAGCAGCTaGCTACTGTTGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHRLSSS*LLLLST
Trigger: GGTGGAGAGCAACAGTAGCCAGCTGCTGCTGAGGCG...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGGGCGCGTGTCCTCGCTaGCGTTGCTCACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVGACPR*RCSPAP
Trigger: GGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCC...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCCCATCATCGCCCTTaGGCCCGGGCAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMSHHRP*ARAILG
Trigger: CCCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTGGGCCTCCACGCCACTaGCATCCCCAGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCGPPRH*HPQLCL
Trigger: GAGACAGAGCTGGGGATGCCAGTGGCGTGGAGGCCC...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCAATATGCATACATATATaGGCTCTGGCAAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDAICIHI*ALARDA
Trigger: TGCATCCCTTGCCAGAGCCCATATATGTATGCATAT...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATGCAGAATGTCCTTACTaGCATCCCCAGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NRQVYDTSRNVASAPGVYAECPY*HPQLCL
Trigger: GAGACAGAGCTGGGGATGCCAGTAAGGACATTCTGC...ATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524352.5
3UTR CAA 72 bp TCCTACATTGATGGTCGGCCTGGAAGCCAGTCATGTTaGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SYIDGRPGSQSC*TLHSRPGGSEV
Trigger: TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGGCCGACCATCAATGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 72 bp AACACGATCTCCCTGTCTCTAGGAGGAGGGTGCAGATaGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCT +
Preference number: 4 (lower is better)
Translates to: NTISLSLGGGCR*QIYGGPRPLIP
Trigger: AGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCCTCCTAGAGACAGGGAGATCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGCTGAGTGCCCCTGGCTaGGGCTGTAGAGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMLSAPG*GCRALS
Trigger: GGACAAGGCTCTACAGCCTCAGCCAGGGGCACTCAG...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAATGGACACTGCTAAGATaGAGATGCCCACAAGAATCA +
Preference number: 4 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKWTLLR*RCPQES
Trigger: TGATTCTTGTGGGCATCTTCATCTTAGCAGTGTCCA...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR TCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVPGMQV*GLRMLD
Trigger: GTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGG...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACAGGGAACTGGGATATTaGGGCCTGGTGCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHRELGY*GLVHGV
Trigger: AACACCATGCACCAGGCCTCAATATCCCAGTTCCCT...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTATCACCTCCAAACAGCTaGGACACACATGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVSPPNS*DTHDLA
Trigger: AGCCAAGTCATGTGTGTCTCAGCTGTTTGGAGGTGA...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCGAGATTCCCCCAAGGTaGGGTGGGTCTGCACTCACT +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCEIPPR*GGSALT
Trigger: AGTGAGTGCAGACCCACCTCACCTTGGGGGAATCTC...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCCTGGCAAGGGATGCATaGGTACATGCGTGTTATGTA +
Preference number: 4 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTLARDA*VHACYV
Trigger: TACATAACACGCATGTACTCATGCATCCCTTGCCAG...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCACTCCCTGTCCTTGGTaGCTGGTCCTGGGTAGCGAT +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCTPCPW*LVLGSD
Trigger: ATCGCTACCCAGGACCAGGCACCAAGGACAGGGAGT...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGTCATAGAAAGGGGCTaGAGGGGCGCCCAGGGACGA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCVIERG*RGAQGR
Trigger: TCGTCCCTGGGCGCCCCTGCAGCCCCTTTCTATGAC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GACACCTCTAGAAATGTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTATCAGATCTCAGCATTTaGCATGGTGGCCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTSRNVASAPGVYQHLLLSDLSI*HGGQRA
Trigger: AGCTCTCTGGCCACCATGGCAAATGCTGAGATCTGA...TAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCACATTTCTAGAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR GCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTAGGAAGGGTGCTCTGTaGAGGACCCCGAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLRKGAL*RTPNLG
Trigger: GCCCAAGTTCGGGGTCCTGCACAGAGCACCCTTCCT...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCACCGTGACTGCCCAATaGCAGAGCACTGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCTVTAQ*QSTGLR
Trigger: CCTGAGTCCAGTGCTCTGGCATTGGGCAGTCACGGT...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTCTCTAGGAGGAGGGTaGAGATTGCAGATTTATGGA +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISSLGGG*RLQIYG
Trigger: TCCATAAATCTGCAATCTGCACCCTCCTCCTAGAGA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGCCCCTAAGCCTCCAGATCCATaGACACAACCGCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: HAHNRQVYDTSRNVASAPKPPDP*TQPPGL
Trigger: TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTT...AGGGGCACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTACCAGCCAAATCCAGATaGAGTCATAGAAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVPAKSR*SHRKGL
Trigger: CAGCCCCTTTCTATGACTCCATCTGGATTTGGCTGG...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGCCCCAACGCCGGTCGTaGTACACTTCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKPQRRS*YTSTRP
Trigger: GGGCCGCGTGGAAGTGTACCACGACCGGCGTTGGGG...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCTGTTGCATGTCACGCTaGCATCTTCGGCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLCCMSR*HLRHVH
Trigger: GTGGACATGCCGAAGATGCCAGCGTGACATGCAACA...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCTTCTCCAAATCTAGCTaGATTCCTGCAGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: STGLRFNMGSPHVTLHISFSKSS*IPAGDL
Trigger: CAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAA...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGACAATAAGTTCAGGTaGGCACACGGTCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSDNKFR*AHGLSH
Trigger: ATGACTGAGACCGTGTGCCCACCTGAACTTATTGTC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTGCTGTTCCTACACCTaGAGGGGCCCAGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGCCSYT*RGPGLS
Trigger: GGAGAGACCTGGGCCCCTCCAGGTGTAGGAACAGCA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTTGCTGTTCCTACACCTaGAGGGGCCCAGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLCCSYT*RGPGLS
Trigger: GGAGAGACCTGGGCCCCTCCAGGTGTAGGAACAGCA...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCATGGAAGGGATAACTaGATTCTTTGCCAGAACCGG +
Preference number: 4 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPHGRDN*ILCQNR
Trigger: CCGGTTCTGGCAAAGAATCCAGTTATCCCTTCCATG...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGACCTCTAGGTACTGCCTaGGATGCGAACTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGPLGTA*DANCSC
Trigger: GCAGCTGCAGTTCGCATCTCAGGCAGTACCTAGAGG...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTCCTCTAGGTACTGCCTaGGATGCGAACTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTPLGTA*DANCSC
Trigger: GCAGCTGCAGTTCGCATCTCAGGCAGTACCTAGAGG...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTCTTGCCCGCCGTTTGTaGCATGGACCATCCTCACAC +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTLARRL*HGPSSH
Trigger: GTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAG...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GGAGCACATGTTCAAGAGGGAAATGACGACCGGCCCCCACGGTCCTGGGATGCATGTCTGAAGAGTAAATaGTCTATACTACCAACCATC +
Preference number: 4 (lower is better)
Translates to: GAHVQEGNDDRPPRSWDACLKSK*SILPTI
Trigger: GATGGTTGGTAGTATAGATCATTTACTCTTCAGACA...TGCATCCCAGGACCGTGGGGGCCGGTCGTCATTTCCCTCTTGAACATGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTGAAGCCAGTCATGTTTaGCCTTGCACTCACGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVEASHV*PCTHAL
Trigger: CAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTC...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTGCAGCAGCCGCAGCTaGAAGTCCCGGAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSCSSRS*KSRKLS
Trigger: TGAGAGCTTCCGGGACTTGCAGCTGCGGCTGCTGCA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTCTGCAGCGCGTCCTaGACCTTCCACACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMFCSAS*TFHTCS
Trigger: GGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGTCCACGCGGCCCTCGTaGGGACCTGAGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKSTRPS*GPEPFT
Trigger: GGTGAATGGCTCAGGTCCGCACGAGGGCCGCGTGGA...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGGCTTTAACCGTGACTaGCCAATGCCAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLGFNRD*PMPEHW
Trigger: CCAGTGCTCTGGCATTGGGCAGTCACGGTTAAAGCC...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCCTTGGTGCCTGGTCCTaGGTAGCGATCAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCLGAWS*VAIRRC
Trigger: ACATCTCCTGATCGCTACCCAGGACCAGGCACCAAG...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCCTGTCCTTGGTGCCTaGTCCTGGGTAGCGATCAGG +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCPVLGA*SWVAIR
Trigger: CCTGATCGCTACCCAGGACCAGGCACCAAGGACAGG...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGACAGGGACCCCAGCTaGGTACAGCAGATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMDRDPS*VQQMLA
Trigger: GGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGACAGGGACCCCAGCTaGGTACAGCAGATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCDRDPS*VQQMLA
Trigger: GGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAAAGGCCAAAGGGAACTaGGATATTGAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGKAKGN*DIEAWC
Trigger: GCACCAGGCCTCAATATCCCAGTTCCCTTTGGCCTT...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTACAGATTGCAGATTTATaGAGGCCCAAGGCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVQIADL*RPKAPY
Trigger: ATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTG...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCTCCCCCAAGGTGAGGTaGGTCTGCACTCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCSPKVR*VCTHLL
Trigger: TAGCAAGTGAGTGCAGACCCACCTCACCTTGGGGGA...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
3UTR CAA 72 bp TCACCTGTAACTAAAAGGCCAAAGGGAACTGGGATATaGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SPVTKRPKGTGI*RPGAWCSEAGQ
Trigger: TTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGCCTTTTAGTTACAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCTTGCCCGCCGTTTGTaGCATGGACCATCCTCACAC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCLARRL*HGPSSH
Trigger: GTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAG...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGGCCCTCGTGCGGACCTaGGCCATTCACCAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWALVRT*AIHQAD
Trigger: ATCCGCCTGGTGAATGGCTCAGGTCCGCACGAGGGC...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAAGCTCCCCTAGTTCTTaGACATGTGTATGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKSSPSS*TCVWPS
Trigger: ACTGGGCCATACACATGTTCAAGAACTAGGGGAGCT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTAGGACCAGGTCAAGATaGAACCTGTGGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGRTRSR*NLWQSG
Trigger: CCCACTCTGCCACAGGTTGCATCTTGACCTGGTCCT...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTCACAGGGGCCACTTCTaGAGGAGGACCAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCHRGHF*RRTRSR
Trigger: TCTTGACCTGGTCCTCCTGCAGAAGTGGCCCCTGTG...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGATCAGATCTCAGCATTTaGCATGGTGGCCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGSDLSI*HGGQRA
Trigger: AGCTCTCTGGCCACCATGGCAAATGCTGAGATCTGA...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGGTACAGCAGATGCTTaGCCGCCGTTTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTGTADA*PPFVTW
Trigger: CCATGTCACAAACGGCGGGCAAGCATCTGCTGTACC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTCAGCCGGTTCACATTaGGAGTCAGGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGSAGSH*ESGPSG
Trigger: ACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGTCAGCTGCAGCTCCATaGCTACGTGCGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKSAAAP*LRAPGA
Trigger: TGCGCCTGGCGCACGTAGGCATGGAGCTGCAGCTGA...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAACTTTCAGTGTCTGTTaGATGTCACGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVTFSVC*MSRWHL
Trigger: AAGATGCCAGCGTGACATGCAACAGACACTGAAAGT...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGGTCTGCACTCACTTaGTACCAGGTAGCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLGSALT*YQVAPL
Trigger: TAGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCC...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTCCCCAAGCAGGCCAGTaGTCACCTGATATGACAGGT +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLPQAGQ*SPDMTG
Trigger: ACCTGTCATATCAGGTGAGCACTGGCCTGCTTGGGG...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGATCTCAGCATTTGCCATaGTGGCCAGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGSQHLP*WPESWL
Trigger: CAGCCAGCTCTCTGGCCACCATGGCAAATGCTGAGA...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLHTGSA*TGSCHQ
Trigger: TTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTG...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTAGCAACGAGTCTGACTaGTTCTGCAGCGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSSNESD*FCSASC
Trigger: GCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCT...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTCCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCPHAGT*WKRETG
Trigger: GCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGG...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTCAGACTGACATGCCCTaGACCAATGCAGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVQTDMP*TNAAKW
Trigger: CCACTTAGCTGCATTGGTCCAGGGCATGTCAGTCTG...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTTCCCCCAAGGTGAGGTaGGTCTGCACTCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLSPKVR*VCTHLL
Trigger: TAGCAAGTGAGTGCAGACCCACCTCACCTTGGGGGA...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTACTGAGTGCCCCTGGCTaGGGCTGTAGAGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLLSAPG*GCRALS
Trigger: GGACAAGGCTCTACAGCCTCAGCCAGGGGCACTCAG...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTTTCCTTCATCCCCCTaGTCACCTTTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSFPSSP*SPLGPG
Trigger: ACCGGGACCCAAAGGTGATCAGGGGGATGAAGGAAA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTAGGGAACTGGGATATTaGGGCCTGGTGCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLRELGY*GLVHGV
Trigger: AACACCATGCACCAGGCCTCAATATCCCAGTTCCCT...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTGGGAAATTCATCACTTaGCGTTGCCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGGKFIT*RCLLLG
Trigger: CCCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCC...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTAGGCTGTATCCAGACTaGCATGCCCTGGACCAATGC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCRLYPD*HALDQC
Trigger: GCATTGGTCCAGGGCATGTCAGTCTGGATACAGCCT...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACTACTTGCAGTCTAGGTaGATGGACCAGTTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHYLQSR*MDQLSA
Trigger: AGCACTTAACTGGTCCATTCACCTAGACTGCAAGTA...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCACGCCCTGGAGGTTCTaGAGTAGGCAACTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCTPWRF*SRQLSS
Trigger: ACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGT...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTAGCTCCCCTAGTTCTTaGACATGTGTATGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVSSPSS*TCVWPS
Trigger: ACTGGGCCATACACATGTTCAAGAACTAGGGGAGCT...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAAGTGCTCACCTGATATaGCAGGTGATCGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGSAHLI*QVIVYL
Trigger: CAGATACACGATCACCTGTCATATCAGGTGAGCACT...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGAWTGS*HQRNPH
Trigger: GTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGC...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGTGTCCTCGCTGGCGTTaGTCACCAGCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWCPRWR*SPAPAG
Trigger: ACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACA...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGCAGGCAATCCAGGGATaGCAGGCCTGCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVQAIQG*QACLPF
Trigger: GAAAGGAAGGCAGGCCTGGCATCCCTGGATTGCCTG...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGATCAGGGCTCCTCATaGAGGAACCTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMDQGSS*RNLVEE
Trigger: CTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGCTTGACGTTGCCTCTTaGTGGGGAGGAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLLDVAS*WGGRCR
Trigger: TCTACATCTTCCTCCCCAGCAAGAGGCAACGTCAAG...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAAATGGACCAGTTAAGTaGTACCTGGAGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGNGPVK*YLEVRL
Trigger: CAGCCTTACCTCCAGGTAGCACTTAACTGGTCCATT...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCATTTTGTCTTCTTACTTaGAGTCTAGGTGAATGGACC +
Preference number: 4 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSFCLLT*SLGEWT
Trigger: GGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAA...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGACCGTGACTGCCCAATaGCAGAGCACTGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVTVTAQ*QSTGLR
Trigger: CCTGAGTCCAGTGCTCTGGCATTGGGCAGTCACGGT...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACGAGGAGGGTGCAGATTaGAGATTTATGGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHEEGAD*RFMEAQ
Trigger: TTGGGCCTCCATAAATCTGCAATCTGCACCCTCCTC...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGAGGAGGGTGCAGATTaGAGATTTATGGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLEEGAD*RFMEAQ
Trigger: TTGGGCCTCCATAAATCTGCAATCTGCACCCTCCTC...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTAAGGTGAGGTGGGTCTaGACTCACTTGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGKVRWV*THLLPG
Trigger: ACCTGGTAGCAAGTGAGTGCAGACCCACCTCACCTT...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCCCCAAGCAGGCCAGTaGTCACCTGATATGACAGGT +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSPQAGQ*SPDMTG
Trigger: ACCTGTCATATCAGGTGAGCACTGGCCTGCTTGGGG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTGTCAGCCAGGAGTGTTaGTGTTCCTACACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSVSQEC*CSYTWR
Trigger: CCTCCAGGTGTAGGAACAGCAACACTCCTGGCTGAC...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGCTTTGGTCCCTGAAATaGAGGCCCATGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLLWSLK*RPMVIS
Trigger: GGAAATGACCATGGGCCTGCATTTCAGGGACCAAAG...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTGTTGCATGTCACGCTaGCATCTTCGGCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGCCMSR*HLRHVH
Trigger: GTGGACATGCCGAAGATGCCAGCGTGACATGCAACA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSHAGTW*KRETGS
Trigger: ACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGCATGCAGGAACCTGGTaGAAGAGAGAGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMHAGTW*KRETGS
Trigger: ACTGCCCGTCTCTCTCTTCCACCAGGTTCCTGCATG...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTGAGGCCTGGTGCATaGTGTTCAGAGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMLRPGA*CSEAGQ
Trigger: TTGCCCAGCCTCTGAACACCATGCACCAGGCCTCAA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTTGGGATATTGAGGCCTaGTGCATGGTGTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLWDIEA*CMVFRG
Trigger: GCCTCTGAACACCATGCACCAGGCCTCAATATCCCA...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCAGATGTAGAAACTCTTaGACTAATGGAGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPRCRNS*TNGGLG
Trigger: TCCCAAACCTCCATTAGTCCAAGAGTTTCTACATCT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGACTCAGGTTTAACATaGGCAGCCCCCATGTCACCC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCDSGLT*AAPMSP
Trigger: GGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGACTCCCTGTCCTTGGTaGCTGGTCCTGGGTAGCGAT +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKTPCPW*LVLGSD
Trigger: ATCGCTACCCAGGACCAGGCACCAAGGACAGGGAGT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSAWTGS*HQRNPH
Trigger: GTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGC...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTTTCCTCTGTGCCCTTaGAGGCAACGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSFPLCP*RQRHPS
Trigger: GGATGGATGACGTTGCCTGCAAGGGCACAGAGGAAA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTCCCATTTGGAGAAGCTaGAGCGGAAGATGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLPIWRS*SGRWFP
Trigger: AGGAAACCATCTTCCGCTGCAGCTTCTCCAAATGGG...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAACTTTCAGTGTCTGTTaGATGTCACGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKTFSVC*MSRWHL
Trigger: AAGATGCCAGCGTGACATGCAACAGACACTGAAAGT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCCCGAACTTGGGCTCTaGCCACTTTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSPELGL*PLSVSV
Trigger: AACAGACACTGAAAGTGGGCAGAGCCCAAGTTCGGG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGCCCGAACTTGGGCTCTaGCCACTTTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMPELGL*PLSVSV
Trigger: AACAGACACTGAAAGTGGGCAGAGCCCAAGTTCGGG...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGGATCAGGGCTCCTCATaGAGGAACCTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVDQGSS*RNLVEE
Trigger: CTCTTCCACCAGGTTCCTGCATGAGGAGCCCTGATC...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGATTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGFLQVT*ISLLPL
Trigger: TAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAA...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTTCTTGCCCCTACAGCTaGCTTCTCCTCTATGTCACT +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLSCPYS*LLLYVT
Trigger: AGTGACATAGAGGAGAAGCCAGCTGTAGGGGCAAGA...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTGACAATAAGTTCAGGTaGGCACACGGTCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVDNKFR*AHGLSH
Trigger: ATGACTGAGACCGTGTGCCCACCTGAACTTATTGTC...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCCAGATTGCAGATTTATaGAGGCCCAAGGCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCQIADL*RPKAPY
Trigger: ATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTG...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TACCAGGTAGCTCCCCTAGTTCTTGAACATGTGTATGGCCCAGTTCTGCTCCTCATATGCATACATATATaGGCTCTGGCAAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: YQVAPLVLEHVYGPVLLLICIHI*ALARDA
Trigger: TGCATCCCTTGCCAGAGCCCATATATGTATGCATAT...GAGGAGCAGAACTGGGCCATACACATGTTCAAGAACTAGGGGAGCTACCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTATGCAGGTGTGAGGACTaGGAATGCTGGACGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLCRCED*ECWTGC
Trigger: ACACCCCGTCCAGCATTCTCAGTCCTCACACCTGCA...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGCCTGGGATGCAGGTGTaGGGACTGAGAATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWPGMQV*GLRMLD
Trigger: GTCCAGCATTCTCAGTCCTCACACCTGCATCCCAGG...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGCTCTCCTCCTACATTaGTGGTCGGCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLALLLH*WSAWKP
Trigger: TGGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGC...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTCAGCTGAGACACACATaGCTTGGCTTTAACCGTGAC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCQLRHT*LGFNRD
Trigger: GTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTG...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTAGTGCTCACCTGATATaGCAGGTGATCGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLSAHLI*QVIVYL
Trigger: CAGATACACGATCACCTGTCATATCAGGTGAGCACT...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGACTGGCAAGGGATGCATaGGTACATGCGTGTTATGTA +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGLARDA*VHACYV
Trigger: TACATAACACGCATGTACTCATGCATCCCTTGCCAG...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTAGATGGTTTCCTCTGTaGCCTTGCAGGCAACGTCAT +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCRWFPL*PCRQRH
Trigger: ATGACGTTGCCTGCAAGGGCACAGAGGAAACCATCT...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTCCCATTTGGAGAAGCTaGAGCGGAAGATGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLPIWRS*SGRWFP
Trigger: AGGAAACCATCTTCCGCTGCAGCTTCTCCAAATGGG...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTCCTGCAGGTGACTTaGATTTCCCTCTTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMFLQVT*ISLLPL
Trigger: TAGGGGCAAGAGGGAAATGCAAGTCACCTGCAGGAA...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGTATCCAGACTGACATaGCCTGGACCAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMVSRLT*PGPMQL
Trigger: TAGCTGCATTGGTCCAGGGCATGTCAGTCTGGATAC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTGGCTCTGGCAAGGGATaGATGAGTACATGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCGSGKG*MSTCVL
Trigger: TAACACGCATGTACTCATGCATCCCTTGCCAGAGCC...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGGCTCTGGCAAGGGATaGATGAGTACATGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCGSGKG*MSTCVL
Trigger: TAACACGCATGTACTCATGCATCCCTTGCCAGAGCC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTACCTCATGCAGGAACCTaGTGGAAGAGAGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLPHAGT*WKRETG
Trigger: GCCCGTCTCTCTCTTCCACCAGGTTCCTGCATGAGG...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACTACATATATGGGCTCTaGCAAGGGATGCATGAGTAC +
Preference number: 4 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHYIYGL*QGMHEY
Trigger: GTACTCATGCATCCCTTGCCAGAGCCCATATATGTA...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGGCCTAATTTGCTTTaGTCCCTGAAATGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLRPNLL*SLKCRP
Trigger: GGGCCTGCATTTCAGGGACCAAAGCAAATTAGGCCT...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTACTTGCAGTCTAGGTaGATGGACCAGTTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGYLQSR*MDQLSA
Trigger: AGCACTTAACTGGTCCATTCACCTAGACTGCAAGTA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTTATTGGAAGCAAGAATaGCCTAGGGCCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTYWKQE*PRAILA
Trigger: AGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATA...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGATGTATGGCCCAGTTCTaGTCCTCATGTAAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGCMAQF*SSCKKQ
Trigger: CTGCTTTTTACATGAGGAGCAGAACTGGGCCATACA...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAAGGTGAGGTGGGTCTaGACTCACTTGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKKVRWV*THLLPG
Trigger: ACCTGGTAGCAAGTGAGTGCAGACCCACCTCACCTT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTATCTCAGCATTTGCCATaGTGGCCAGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLSQHLP*WPESWL
Trigger: CAGCCAGCTCTCTGGCCACCATGGCAAATGCTGAGA...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGATTCTCCAAATCTAGCTaGATTCCTGCAGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGFSKSS*IPAGDL
Trigger: CAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAA...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGAAGGACATTTAAGGAGTaGCAAGCATATTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGRTFKE*QAYWKQ
Trigger: TTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCT...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTTACATATATGGGCTCTaGCAAGGGATGCATGAGTAC +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTYIYGL*QGMHEY
Trigger: GTACTCATGCATCCCTTGCCAGAGCCCATATATGTA...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTGGACACTGCTAAGATaGAGATGCCCACAAGAATCA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCWTLLR*RCPQES
Trigger: TGATTCTTGTGGGCATCTTCATCTTAGCAGTGTCCA...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTTTCTTACAAAAGGTCTaGTGTATTTTAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGFLQKV*CILGQA
Trigger: GGCCTGGCCTAAAATACATCAGACCTTTTGTAAGAA...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR GCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTCTCTAGGAGGAGGGTaGAGATTGCAGATTTATGGA +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCSLGGG*RLQIYG
Trigger: TCCATAAATCTGCAATCTGCACCCTCCTCCTAGAGA...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGCCAGCCAAATCCAGATaGAGTCATAGAAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKPAKSR*SHRKGL
Trigger: CAGCCCCTTTCTATGACTCCATCTGGATTTGGCTGG...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGTGGGATATTGAGGCCTaGTGCATGGTGTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWWDIEA*CMVFRG
Trigger: GCCTCTGAACACCATGCACCAGGCCTCAATATCCCA...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTACAGCTGAGACACACATaGCTTGGCTTTAACCGTGAC +
Preference number: 4 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLQLRHT*LGFNRD
Trigger: GTCACGGTTAAAGCCAAGTCATGTGTGTCTCAGCTG...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGCCACAGATTCACACCTaGAGAGGCTTGGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWPQIHT*RGLEDA
Trigger: TGCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGG...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGGTGGCCCTGCTAAGATaGAGATGCCCACAAGAATCA +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWVALLR*RCPQES
Trigger: TGATTCTTGTGGGCATCTTCATCTTAGCAGGGCCAC...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGGATGCATGAGTACATaGGTGTTATGTAAACATAGC +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTGCMST*VLCKHS
Trigger: GCTATGTTTACATAACACGCATGTACTCATGCATCC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR TCA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGGTTTGGGAATTGTCTaGAGAGTAAATGATCTATAC +
Preference number: 4 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTGLGIV*RVNDLY
Trigger: GTATAGATCATTTACTCTTCAGACAATTCCCAAACC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTTTTTGTCTTCTTACTTaGAGTCTAGGTGAATGGACC +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCFCLLT*SLGEWT
Trigger: GGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAA...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGGATGCATGAGTACATaGGTGTTATGTAAACATAGC +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMGCMST*VLCKHS
Trigger: GCTATGTTTACATAACACGCATGTACTCATGCATCC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGAGTAAGAGAGTTATGTaGGTCTTCATGGAAGGGATA +
Preference number: 4 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMSKRVM*VFMEGI
Trigger: TATCCCTTCCATGAAGACGCACATAACTCTCTTACT...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CCA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTAGGACATTTAAGGAGTaGCAAGCATATTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCRTFKE*QAYWKQ
Trigger: TTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCT...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTTTGCCAGAACCGGGTTaGGAATTTAGTTTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLLPEPG*EFSLFN
Trigger: ATTGAACAAACTAAATTCCCAACCCGGTTCTGGCAA...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR TCA 90 bp TTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTTGTCTGAAGAGTAAATaGTCTATACTACCAACCATC +
Preference number: 4 (lower is better)
Translates to: LRSGKHIGSKNDLGPYWLCLKSK*SILPTI
Trigger: GATGGTTGGTAGTATAGATCATTTACTCTTCAGACA...AAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGAGATGTAGAAACTCTTaGACTAATGGAGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVRCRNS*TNGGLG
Trigger: TCCCAAACCTCCATTAGTCCAAGAGTTTCTACATCT...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGACCAATGCAGCTAAGTaGATACATGAATTTGGCACC +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWTNAAK*IHEFGT
Trigger: GGTGCCAAATTCATGTATCCACTTAGCTGCATTGGT...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTGTAAACATAGCAATTaGTCAGAAAGAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCCKHSN*SEREFL
Trigger: GAGAAACTCTCTTTCTGACCAATTGCTATGTTTACA...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CCA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTGTAAACATAGCAATTaGTCAGAAAGAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSCKHSN*SEREFL
Trigger: GAGAAACTCTCTTTCTGACCAATTGCTATGTTTACA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAGATACTATTTAGCGTaGCATGGTAGTCATTCAATG +
Preference number: 4 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKRYYLA*HGSHSM
Trigger: CATTGAATGACTACCATGGCACGCTAAATAGTATCT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR GCA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAGATACTATTTAGCGTaGCATGGTAGTCATTCAATG +
Preference number: 4 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWRYYLA*HGSHSM
Trigger: CATTGAATGACTACCATGGCACGCTAAATAGTATCT...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS TCA 90 bp GCAGCCGCGTGCGGTGGAGGGCCACGTCGTAGGACAGGCTGTGGTTaGGGCCGCGCAGCACGCCGCCCACGTCGGCCAGCTCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: AAACGGGPRRRTGCG*GRAARRPRRPAPRP
Trigger: TGGGCGAGGAGCTGGCCGACGTGGGCGGCGTGCTGCGCGGCCTCAACCACAGCCTGTCCTACGACGTGGCCCTCCACCGCACGCGGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp TGCCTACGTGCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTGGCGTTaGTCACCAGCACCCGCAGGTCCTGCAGCCGCGTGCGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: CLRAPGAGGACPRWR*SPAPAGPAAACGGG
Trigger: CCCTCCACCGCACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGCACGTAGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp GCAGCTGGTAGAGCTCCAGCTGCGCCGTGTCGCTCTGCTGGCCCGTaGGGTCCCGCAGCAGGGCCACCGCCTGCTCGGTCTGCACCGCCT +
Preference number: 5 (lower is better)
Translates to: AAGRAPAAPCRSAGP*GPAAGPPPARSAPP
Trigger: AGGCGGTGCAGACCGAGCAGGCGGTGGCCCTGCTGCGGGACCGCACGGGCCAGCAGAGCGACACGGCGCAGCTGGAGCTCTACCAGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 90 bp GCTCCATGCCTACGTGCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTaGCGTTGCTCACCAGCACCCGCAGGTCCTGCAGCCGCGTGCGGT +
Preference number: 5 (lower is better)
Translates to: APCLRAPGAGGACPR*RCSPAPAGPAAACG
Trigger: ACCGCACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGCACGTAGGCATGGAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 90 bp CCCAGGATGCCCACCCTGCGCGCCAGCCCGTCCAGCAGGCCCGCGTaGCGCCTCAGCAGCAGCTGGCTACTGTTGCTCTCCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRMPTLRASPSSRPA*RLSSSWLLLLSTCS
Trigger: GCTGCAGGTGGAGAGCAACAGTAGCCAGCTGCTGCTGAGGCGCCACGCGGGCCTGCTGGACGGGCTGGCGCGCAGGGTGGGCATCCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 90 bp GCCCTCCAGCCGCTGCACTGCGCCCGCCAGCGCCAGCAACGAGTCTaGCTGGTTCTGCAGCGCGTCCTGCACCTTCCACACCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: ALQPLHCARQRQQRV*LVLQRVLHLPHLLR
Trigger: ACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGCAGTGCAGCGGCTGGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp AGGTCCTCGGTGACCGCGTTGAGCATGGCCAGCTCCTGCTTCAGCTaGAGCTCCATGCCTACGTGCGCCAGGCGCAGGCGGCGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: RSSVTALSMASSCFS*SSMPTCARRRRRVS
Trigger: GGACACGCGCCGCCTGCGCCTGGCGCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCTCAACGCGGTCACCGAGGACCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp CCCGCCAGCGCCAGCAACGAGTCTGACTGGTTCTGCAGCGCGTCCTaGACCTTCCACACCTGCTCCGTCAGGTCCGCTTGCAGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: PASASNESDWFCSAS*TFHTCSVRSACSGA
Trigger: GGCTCCGCTGCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp CGCTGCACTGCGCCCGCCAGCGCCAGCAACGAGTCTGACTGGTTCTaGAGCGCGTCCTGCACCTTCCACACCTGCTCCGTCAGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: RCTAPASASNESDWF*SASCTFHTCSVRSA
Trigger: AGCGGACCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGCAGTGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp TTGAGGCGCAGGTCCTCGGTGACCGCGTTGAGCATGGCCAGCTCCTaGTTCAGCTGCAGCTCCATGCCTACGTGCGCCAGGCGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LRRRSSVTALSMASS*FSCSSMPTCARRRR
Trigger: CCGCCTGCGCCTGGCGCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCTCAACGCGGTCACCGAGGACCTGCGCCTCAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 90 bp TCCAGCCGCTGCACTGCGCCCGCCAGCGCCAGCAACGAGTCTGACTaGTTCTGCAGCGCGTCCTGCACCTTCCACACCTGCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSRCTAPASASNESD*FCSASCTFHTCSVR
Trigger: CCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGCAGTGCAGCGGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 90 bp CCAACGCCGGTCGTGGTACACTTCCACGCGGCCCTCGTGCGGACCTaGGCCATTCACCAGGCGGATCATCATCGGGGCCTCCACGCCACT +
Preference number: 5 (lower is better)
Translates to: PTPVVVHFHAALVRT*AIHQADHHRGLHAT
Trigger: AGTGGCGTGGAGGCCCCGATGATGATCCGCCTGGTGAATGGCTCAGGTCCGCACGAGGGCCGCGTGGAAGTGTACCACGACCGGCGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 90 bp CCCGGTGGCCCTTTCGCGAGGGAGATGTTCCGCAGTGCGATGGAGTaGTCCCAGTCCTTGAGGCGCAGGTCCTCGGTGACCGCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PGGPFAREMFRSAME*SQSLRRRSSVTALS
Trigger: GCTCAACGCGGTCACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTCCATCGCACTGCGGAACATCTCCCTCGCGAAAGGGCCACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 90 bp TGTGGCCCCCAGCTTCCCATCATCGCCCTTGGGCCCGGGCAATCCTaGGGTACCTCTCTCCCCGGGCAGACCTCGAAGTCCAGGCAATCC +
Preference number: 5 (lower is better)
Translates to: CGPQLPIIALGPGQS*GTSLPGQTSKSRQS
Trigger: GGATTGCCTGGACTTCGAGGTCTGCCCGGGGAGAGAGGTACCCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGAAGCTGGGGGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp GCCGCAGCTGCAAGTCCCGGAAGCTCTCATTCAGCCGGTTCACATTaGGAGTCAGGGCCTTCAGGTCGTCAGGGGAGCTGCGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AAAASPGSSHSAGSH*ESGPSGRQGSCAAW
Trigger: CCAGGCCGCGCAGCTCCCCTGACGACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAATGAGAGCTTCCGGGACTTGCAGCTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp AACGAGTCTGACTGGTTCTGCAGCGCGTCCTGCACCTTCCACACCTaGTCCGTCAGGTCCGCTTGCAGCGGAGCCTGCAGCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: NESDWFCSASCTFHT*SVRSACSGACSSRS
Trigger: GCTGCGGCTGCTGCAGGCTCCGCTGCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp ACCTTTGGGTCCCGGTGGCCCTTTCGCGAGGGAGATGTTCCGCAGTaGGATGGAGTGCTCCCAGTCCTTGAGGCGCAGGTCCTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: TFGSRWPFREGDVPQ*DGVLPVLEAQVLGD
Trigger: GTCACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTCCATCGCACTGCGGAACATCTCCCTCGCGAAAGGGCCACCGGGACCCAAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 90 bp CTCTCCTTTTGGGCCTCGGTCACCTTTGAACCCACGCATGCCCATTaGTCCTGTGGCCCCCAGCTTCCCATCATCGCCCTTGGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: LSFWASVTFEPTHAH*SCGPQLPIIALGPG
Trigger: CCCGGGCCCAAGGGCGATGATGGGAAGCTGGGGGCCACAGGACCAATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCCCAAAAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000518030.1
ENST00000524352.5
CDS GCA 90 bp CCCCGGGCAGACCTCGAAGTCCAGGCAATCCAGGGATGCCAGGCCTaGCTTCCTTTCCTTCATCCCCCTGATCACCTTTGGGTCCCGGTG +
Preference number: 5 (lower is better)
Translates to: PRADLEVQAIQGCQA*LPFLHPPDHLWVPV
Trigger: CACCGGGACCCAAAGGTGATCAGGGGGATGAAGGAAAGGAAGGCAGGCCTGGCATCCCTGGATTGCCTGGACTTCGAGGTCTGCCCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000518030.1
ENST00000524352.5
CDS-3UTR CAA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGGTGTCCTCGCTGGCGTaGCTCACCAGCACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLVSSLA*LTSTRR
Trigger: CCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACAC...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTGAGTGCTCCCAGTCCTaGAGGCGCAGGTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPECSQS*RRRSSV
Trigger: CACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTC...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp ACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTCTCCGTCAGGTCCGCTaGCAGCGGAGCCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TLEPQPWLQPLNLQTYGALRQVR*QRSLQQ
Trigger: CTGCTGCAGGCTCCGCTGCAAGCGGACCTGACGGAG...AGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACATCCTCGGTGACCGCGTaGAGCATGGCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTSSVTA*SMASSC
Trigger: GCAGGAGCTGGCCATGCTCAACGCGGTCACCGAGGA...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GCCAGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACAACCCACGCATGCCCATaGGTCCTGTGGCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ARALDSGLTWAAPMSPSTTHACP*VLWPPA
Trigger: AGCTGGGGGCCACAGGACCAATGGGCATGCGTGGGT...TGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACAACCCACGCATGCCCATaGGTCCTGTGGCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTTHACP*VLWPPA
Trigger: AGCTGGGGGCCACAGGACCAATGGGCATGCGTGGGT...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTAAATTCCCATCATCGCCCTaGGGCCCGGGCAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: ASAPGVYQHLLLDQQSPKFPSSP*GPGNPG
Trigger: CCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGAA...TTTAGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GAGAATGCTGGACGGGGTGTGGTCGAGGCATGGTCAGGGTGGCCCCGAGCTGTGCTGAGGCCTATGAGTTaGAGATTCCCCCAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: ENAGRGVVEAWSGWPRAVLRPMS*RFPQGE
Trigger: CTCACCTTGGGGGAATCTCAAACTCATAGGCCTCAG...CACAGCTCGGGGCCACCCTGACCATGCCTCGACCACACCCCGTCCAGCATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 90 bp CAGCATGCTTCAGGGCCGACAGGGACCCCAGCTGGGTACAGCAGATaGTTGCCCGCCGTTTGTGACATGGACCATCCTCACACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: QHASGPTGTPAGYSR*LPAVCDMDHPHTGS
Trigger: TGAACCTGTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTCGGCCCTGAAGCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS GCA 90 bp TACCTCTCTCCCCGGGCAGACCTCGAAGTCCAGGCAATCCAGGGATaGCAGGCCTGCCTTCCTTTCCTTCATCCCCCTGATCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: YLSPRADLEVQAIQG*QACLPFLHPPDHLW
Trigger: CCAAAGGTGATCAGGGGGATGAAGGAAAGGAAGGCAGGCCTGGCATCCCTGGATTGCCTGGACTTCGAGGTCTGCCCGGGGAGAGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000518030.1
ENST00000524352.5
CDS-3UTR CAA 90 bp GTGGCCAGTGCCCCTGGGGTCTATCAGCATCTCTTGCTAGACCAGCAGAGCCCTTTCAGCCGGTTCACATaGCGAGTCAGGGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VASAPGVYQHLLLDQQSPFSRFT*RVRAFR
Trigger: CCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAA...AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGACCCCAGGGGCACTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCATTCCCATCATCGCCCTaGGGCCCGGGCAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSFPSSP*GPGNPG
Trigger: CCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGAA...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCTTCCCATCATCGCCCTaGGGCCCGGGCAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPFPSSP*GPGNPG
Trigger: CCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGAA...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp CTAGCGAGTGACCGGGGGAAGCCTCCAGATCCATGCACACAACCGCCAGGTTTAGGGCCTCGGTCACCTTaGAACCCACGCATGCCCATT +
Preference number: 5 (lower is better)
Translates to: LASDRGKPPDPCTQPPGLGPRSP*NPRMPI
Trigger: AATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCCC...TAAACCTGGCGGTTGTGTGCATGGATCTGGAGGCTTCCCCCGGTCACTCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS GCA 90 bp ATGCTTCAGGGCCGACAGGGACCCCAGCTGGGTACAGCAGATGCTTaGCCGCCGTTTGTGACATGGACCATCCTCACACAGGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: MLQGRQGPQLGTADA*PPFVTWTILTQVQL
Trigger: AAGCTGAACCTGTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTCGGCCCTGAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS-3UTR CAA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGGGGTACAGCAGATGCTaGCCCGCCGTTTGTGACATG +
Preference number: 5 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLGYSRC*PAVCDM
Trigger: CATGTCACAAACGGCGGGCAAGCATCTGCTGTACCC...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS GCA 90 bp GCGGCCTGGACACATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCACAGATGGAGCTGGTGTCACAGTCGC +
Preference number: 5 (lower is better)
Translates to: AAWTHPHTGSAWTGS*HQRNPHRWSWCHSR
Trigger: GCGACTGTGACACCAGCTCCATCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGTGTCCAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518030.1
CDS-3UTR CAA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCGGGCCTCGGTCACCTTaGAACCCACGCATGCCCATT +
Preference number: 5 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPGPRSP*NPRMPI
Trigger: AATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCCC...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCGGGTACAGCAGATGCTaGCCCGCCGTTTGTGACATG +
Preference number: 5 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTGYSRC*PAVCDM
Trigger: CATGTCACAAACGGCGGGCAAGCATCTGCTGTACCC...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGCTCCGTCAGGTCCGCTaGCAGCGGAGCCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLLRQVR*QRSLQQ
Trigger: CTGCTGCAGGCTCCGCTGCAAGCGGACCTGACGGAG...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGATCCTCGGTGACCGCGTaGAGCATGGCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGSSVTA*SMASSC
Trigger: GCAGGAGCTGGCCATGCTCAACGCGGTCACCGAGGA...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCGGAAGCCAGTCATGTTaGACCTTGCACTCACGCCCT +
Preference number: 5 (lower is better)
Translates to: STGLRFNMGSPHVTLHISGSQSC*TLHSRP
Trigger: AGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCC...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GCCAAAGGGAACTGGGATATTGAGGCCTGGTGCATGGTGTTCAGAGGCTGGGCATGTCAGCCAGGAGTGTaGCTGTTCCTACACCTGGAG +
Preference number: 5 (lower is better)
Translates to: AKGNWDIEAWCMVFRGWACQPGV*LFLHLE
Trigger: CTCCAGGTGTAGGAACAGCAACACTCCTGGCTGACA...TGCCCAGCCTCTGAACACCATGCACCAGGCCTCAATATCCCAGTTCCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp CAGCCATGGCTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTGGGGGACAGTCTATCAGCATCTCTaGCTAGACCAGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: QPWLQPLNLQTYGAAWGTVYQHL*LDQQSP
Trigger: AGGGCTCTGCTGGTCTAGCAAGAGATGCTGATAGAC...TGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAGCCATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCTCACACAGGTTCAGCTaGGACAGGCTCCTGCCATCA +
Preference number: 5 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTSHRFS*DRLLPS
Trigger: TGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGA...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTGTGTCCTCGCTGGCGTaGCTCACCAGCACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTVSSLA*LTSTRR
Trigger: CCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACAC...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp CCTGGAAGCCAGTCATGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAAGCTCTCCTCCTACATaGATGGTCGGCCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PGSQSCLTLHSRPGGSEVSSPPT*MVGLEA
Trigger: GGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGCT...TACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGGAGGAGGGTGCAGATaGCAGATTTATGGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSGGGCR*QIYGGP
Trigger: TGGGCCTCCATAAATCTGCAATCTGCACCCTCCTCC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 90 bp TGTGACATGGACCATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCACAGATGGAGCTGGTGTCACAGTCGC +
Preference number: 5 (lower is better)
Translates to: CDMDHPHTGSAWTGS*HQRNPHRWSWCHSR
Trigger: GCGACTGTGACACCAGCTCCATCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTCCATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS-3UTR CAA 90 bp AAAGGTAGGGAGCCTCCTTTGACACTTGAGCCCCAGCCATGGCTCCAGCCTCTGTGTAGGTACATAGCTTaGTTCTCCATCACACCCTGC +
Preference number: 5 (lower is better)
Translates to: KGREPPLTLEPQPWLQPLCRYIA*FSITPC
Trigger: GCAGGGTGTGATGGAGAACAAAGCTATGTACCTACA...CAGAGGCTGGAGCCATGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp AGATCCATGCACACAACCGCCAGGTTTATGACACCTCTAGAAATGTGGCCAGTGGGTAGGGAGCCTCCTTaGACACTTGAGCCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RSMHTTARFMTPLEMWPVGREPP*TLEPQP
Trigger: TGGCTGGGGCTCAAGTGTCAAAGGAGGCTCCCTACC...CACTGGCCACATTTCTAGAGGTGTCATAAACCTGGCGGTTGTGTGCATGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS-3UTR CAA 90 bp GCCCAGTTCTGCTCCTCATGTAAAAAGCAGAACACGATCTCCCTGTCTCTAGGATTCAGCCGGTTCACATaGCGAGTCAGGGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AQFCSSCKKQNTISLSLGFSRFT*RVRAFR
Trigger: CCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAA...TCCTAGAGACAGGGAGATCGTGTTCTGCTTTTTACATGAGGAGCAGAACTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGAGTGCTCCCAGTCCTaGAGGCGCAGGTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCECSQS*RRRSSV
Trigger: CACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp TCCATTAGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAGATCCTCCCAGTGCCTaGCCCGAATCGAGCTGTGCG +
Preference number: 5 (lower is better)
Translates to: SIRTCVFLTTDSHLKRLGDPPSA*PESSCA
Trigger: CGCACAGCTCGATTCGGGCAAGGCACTGGGAGGATC...TCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCTAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACTTTCAGTGTCTGTaGCATGTCACGCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPHFQCL*HVTLAS
Trigger: AGATGCCAGCGTGACATGCAACAGACACTGAAAGTG...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTTGCAGGACCCCGAACTaGGGCTCTGCCCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVCRTPN*GSAHFQ
Trigger: CTGAAAGTGGGCAGAGCCCAAGTTCGGGGTCCTGCA...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GGAGGGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCATTCATCACTTGACGTaGCCTCTTGCTGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GGCRLQIYGGPRPLIPTPIHHLT*PLAGEE
Trigger: TTCCTCCCCAGCAAGAGGCAACGTCAAGTGATGAAT...GGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ATTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGGCCTCGGTCACCTTaGAACCCACGCATGCCCATT +
Preference number: 5 (lower is better)
Translates to: IPFSKSSWIPAGDLHFPLGPRSP*NPRMPI
Trigger: AATGGGCATGCGTGGGTTCAAAGGTGACCGAGGCCC...AAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGATCCTCCCAGTGCCTaGCCCGAATCGAGCTGTGCG +
Preference number: 5 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMDPPSA*PESSCA
Trigger: CGCACAGCTCGATTCGGGCAAGGCACTGGGAGGATC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAGGAAGCCAGTCATGTTaGACCTTGCACTCACGCCCT +
Preference number: 5 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKGSQSC*TLHSRP
Trigger: AGGGCGTGAGTGCAAGGTCAAACATGACTGGCTTCC...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTTGGGTCTGCACTCACTaGCTACCAGGTAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVWVCTH*LPGSSP
Trigger: AGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCCA...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAATGTCAGCCAGGAGTGTaGCTGTTCCTACACCTGGAG +
Preference number: 5 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKCQPGV*LFLHLE
Trigger: CTCCAGGTGTAGGAACAGCAACACTCCTGGCTGACA...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACTCACACAGGTTCAGCTaGGACAGGCTCCTGCCATCA +
Preference number: 5 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHSHRFS*DRLLPS
Trigger: TGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGA...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GACCTAGGGCCATATTGGCTTAGTTGTCAGCCAGGAGTGTTGCTGTTCCTACACATTCATCACTTGACGTaGCCTCTTGCTGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DLGPYWLSCQPGVLLFLHIHHLT*PLAGEE
Trigger: TTCCTCCCCAGCAAGAGGCAACGTCAAGTGATGAAT...GTGTAGGAACAGCAACACTCCTGGCTGACAACTAAGCCAATATGGCCCTAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAACTTGCATTTCCCTCTaGCCCCTACAGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKTCISL*PLQLAS
Trigger: AGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAACCCACGCATGCCCATaGGTCCTGTGGCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLTHACP*VLWPPA
Trigger: AGCTGGGGGCCACAGGACCAATGGGCATGCGTGGGT...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTGCAGGACCCCGAACTaGGGCTCTGCCCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVCRTPN*GSAHFQ
Trigger: CTGAAAGTGGGCAGAGCCCAAGTTCGGGGTCCTGCA...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTTCGCTGCTGCTGCACTaGTCTCTGACACATTCTCAG +
Preference number: 5 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVSLLLH*SLTHSQ
Trigger: CTGAGAATGTGTCAGAGACAAGTGCAGCAGCAGCGA...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp CCTGAAGAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACGGGGAAATTCATCACTaGACGTTGCCTCTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PEEAWKMQNHHLQTAETHGEIHH*TLPLAG
Trigger: CCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCCC...GTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TTCCCTTCTCCAAATCTAGCTGGATTCCTGCAGGTGACTTGCATTTCCCTCTTGGGGGAAATTCATCACTaGACGTTGCCTCTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: FPSPNLAGFLQVTCISLLGEIHH*TLPLAG
Trigger: CCCAGCAAGAGGCAACGTCAAGTGATGAATTTCCCC...CAAGAGGGAAATGCAAGTCACCTGCAGGAATCCAGCTAGATTTGGAGAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGGACTTGTGTTTTCCTGACCACAGATTCACACCTGAAGAGGCTTGGAAGATGCACTTGCATTTCCCTCTaGCCCCTACAGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RTCVFLTTDSHLKRLGRCTCISL*PLQLAS
Trigger: AGAAGCCAGCTGTAGGGGCAAGAGGGAAATGCAAGT...GCATCTTCCAAGCCTCTTCAGGTGTGAATCTGTGGTCAGGAAAACACAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GGTGCAGATTGCAGATTTATGGAGGCCCAAGGCCCCTTATTCCTACTCCCCACCACGGTCTCAGTCATTTaGTCTTCTTACTTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: GADCRFMEAQGPLFLLPTTVSVI*SSYLQS
Trigger: AGACTGCAAGTAAGAAGACAAAATGACTGAGACCGT...GGTGGGGAGTAGGAATAAGGGGCCTTGGGCCTCCATAAATCTGCAATCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGTTTCCTCTGTGCCCTaGCAGGCAACGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCVSSVP*QATSSI
Trigger: GATGGATGACGTTGCCTGCAAGGGCACAGAGGAAAC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGGTTTCCTCTGTGCCCTaGCAGGCAACGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: YAYIYGLWQGMHEYMRVMVSSVP*QATSSI
Trigger: GATGGATGACGTTGCCTGCAAGGGCACAGAGGAAAC...CATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTCACTTTCAGTGTCTGTaGCATGTCACGCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVHFQCL*HVTLAS
Trigger: AGATGCCAGCGTGACATGCAACAGACACTGAAAGTG...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGGTCCTGCACCCAAGCTTTTAGCTCAGGCCAAGTAAAGACAATAAGTTCAGGTAAGGGAACTGGGATATaGAGGCCTGGTGCATGGTGT +
Preference number: 5 (lower is better)
Translates to: RSCTQAFSSGQVKTISSGKGTGI*RPGAWC
Trigger: ACACCATGCACCAGGCCTCAATATCCCAGTTCCCTT...ACCTGAACTTATTGTCTTTACTTGGCCTGAGCTAAAAGCTTGGGTGCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGCAGTGGATACATGAATTaGGCACCCAAGATACTATTT +
Preference number: 5 (lower is better)
Translates to: STGLRFNMGSPHVTLHISSGYMN*APKILF
Trigger: AAATAGTATCTTGGGTGCCAAATTCATGTATCCACT...GCTGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTCAGTCATGTTTGACCTaGCACTCACGCCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSQSCLT*HSRPGG
Trigger: ACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTG...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGCCATATTGGCTTAGTTGTCAGTCATGTTTGACCTaGCACTCACGCCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGKHIGSKNDLGPYWLSCQSCLT*HSRPGG
Trigger: ACCTCCAGGGCGTGAGTGCAAGGTCAAACATGACTG...ACAACTAAGCCAATATGGCCCTAGGTCATTCTTGCTTCCAATATGCTTGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTGGAGGAGGGTGCAGATaGCAGATTTATGGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCGGGCR*QIYGGP
Trigger: TGGGCCTCCATAAATCTGCAATCTGCACCCTCCTCC...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTGGGTCTGCACTCACTaGCTACCAGGTAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVWVCTH*LPGSSP
Trigger: AGGGGAGCTACCTGGTAGCAAGTGAGTGCAGACCCA...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GAGGCTTGGAAGATGCAAAATCATCACCTCCAAACAGCTGAGACACACATGACTCTGAGGCCTATGAGTTaGAGATTCCCCCAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: EAWKMQNHHLQTAETHMTLRPMS*RFPQGE
Trigger: CTCACCTTGGGGGAATCTCAAACTCATAGGCCTCAG...AGTCATGTGTGTCTCAGCTGTTTGGAGGTGATGATTTTGCATCTTCCAAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGAGCACTGGACTCAGGTTTAACATGGGCAGCCCCCATGTCACCCTCCACATCAGGTTGGGAATTTAGTTaGTTCAATGTGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: RALDSGLTWAAPMSPSTSGWEFS*FNVASF
Trigger: GAAAGATGCCACATTGAACAAACTAAATTCCCAACC...TGATGTGGAGGGTGACATGGGGGCTGCCCATGTTAAACCTGAGTCCAGTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS-3UTR CAA 90 bp TGTTTGACCTTGCACTCACGCCCTGGAGGTTCTGAAGTAGGCAACTTTCTAGTTTGTAGGTACATAGCTTaGTTCTCCATCACACCCTGC +
Preference number: 5 (lower is better)
Translates to: CLTLHSRPGGSEVGNFLVCRYIA*FSITPC
Trigger: GCAGGGTGTGATGGAGAACAAAGCTATGTACCTACA...AACTAGAAAGTTGCCTACTTCAGAACCTCCAGGGCGTGAGTGCAAGGTCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGTTATGTTCGCTGCTGCTGCACTaGTCTCTGACACATTCTCAG +
Preference number: 5 (lower is better)
Translates to: MHTYMGSGKGCMSTCVLCSLLLH*SLTHSQ
Trigger: CTGAGAATGTGTCAGAGACAAGTGCAGCAGCAGCGA...ACATAACACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAGGGTACAGCAGATGCTaGCCCGCCGTTTGTGACATG +
Preference number: 5 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLGYSRC*PAVCDM
Trigger: CATGTCACAAACGGCGGGCAAGCATCTGCTGTACCC...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TTATATATGCATACATATATGGGCTCTGGCAAGGGATGCATGAGTACATGCGTGAAGGGAACTGGGATATaGAGGCCTGGTGCATGGTGT +
Preference number: 5 (lower is better)
Translates to: LYMHTYMGSGKGCMSTCVKGTGI*RPGAWC
Trigger: ACACCATGCACCAGGCCTCAATATCCCAGTTCCCTT...CACGCATGTACTCATGCATCCCTTGCCAGAGCCCATATATGTATGCATATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp AGACGGGCAGTAGGTCCCAGAGTTATACTTCGGAGCACATGTTCAAGAGGGAAAACGGTCTCAGTCATTTaGTCTTCTTACTTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RRAVGPRVILRSTCSRGKTVSVI*SSYLQS
Trigger: AGACTGCAAGTAAGAAGACAAAATGACTGAGACCGT...TTTCCCTCTTGAACATGTGCTCCGAAGTATAACTCTGGGACCTACTGCCCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TCAGAAAGAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAGCTCTCCTCCTACATaGATGGTCGGCCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SEREFLIIRTFKEWQAYWSSPPT*MVGLEA
Trigger: GGCTTCCAGGCCGACCATCAATGTAGGAGGAGAGCT...CCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTCTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp ACACGGTCTCAGTCATTTTGTCTTCTTACTTGCAGTCTAGGTGAATGGACCAGTTGTAGGTACATAGCTTaGTTCTCCATCACACCCTGC +
Preference number: 5 (lower is better)
Translates to: TRSQSFCLLTCSLGEWTSCRYIA*FSITPC
Trigger: GCAGGGTGTGATGGAGAACAAAGCTATGTACCTACA...ACTGGTCCATTCACCTAGACTGCAAGTAAGAAGACAAAATGACTGAGACCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp TCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAATGACCTAAAAGTGGTGATCCAGTaGATCAGGGCTCCTCATGCA +
Preference number: 5 (lower is better)
Translates to: SSLGHLRSGKHIGSKNDLKVVIQ*IRAPHA
Trigger: TGCATGAGGAGCCCTGATCAACTGGATCACCACTTT...TAGGTCATTCTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS-3UTR CAA 90 bp GAGAGTTTCTCATCATTAGGACATTTAAGGAGTGGCAAGCATATTGGAAGCAAGAGTGGATACATGAATTaGGCACCCAAGATACTATTT +
Preference number: 5 (lower is better)
Translates to: ESFSSLGHLRSGKHIGSKSGYMN*APKILF
Trigger: AAATAGTATCTTGGGTGCCAAATTCATGTATCCACT...CTTGCTTCCAATATGCTTGCCACTCCTTAAATGTCCTAATGATGAGAAACTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp GTGCGGTCCCGCAGCAGGGCCACCGCCTGCTCGGTCTaGACCGCCTGCGCCTGCAGCCCCCACAGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: VRSRSRATACSV*TACACSPHSAP
Trigger: GGGCGCGCTGTGGGGGCTGCAGGCGCAGGCGGTGCAGACCGAGCAGGCGGTGGCCCTGCTGCGGGACCGCAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GCACGCCGCCCACGTCGGCCAGCTCCTCGCCCAGGATaGCCACCCTGCGCGCCAGCCCGTCCAGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: ARRPRRPAPRPG*PPCAPARPAGP
Trigger: CGGGCCTGCTGGACGGGCTGGCGCGCAGGGTGGGCATCCTGGGCGAGGAGCTGGCCGACGTGGGCGGCGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp TGCTGGCCCGTGCGGTCCCGCAGCAGGGCCACCGCCTaGTCGGTCTGCACCGCCTGCGCCTGCAGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: CWPVRSRSRATA*SVCTACACSPH
Trigger: GTGGGGGCTGCAGGCGCAGGCGGTGCAGACCGAGCAGGCGGTGGCCCTGCTGCGGGACCGCACGGGCCAGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTGGCGTTaGTCACCAGCACCCGCAGGTCCTGCAGCCGCGTGC +
Preference number: 6 (lower is better)
Translates to: APGAGGACPRWR*SPAPAGPAAAC
Trigger: GCACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CAA 72 bp TGCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTGGCGTaGCTCACCAGCACCCGCAGGTCCTGCAGCCGCGTG +
Preference number: 6 (lower is better)
Translates to: CARRRRRVSSLA*LTSTRRSCSRV
Trigger: CACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp AGAGCTCCAGCTGCGCCGTGTCGCTCTGCTGGCCCGTaGGGTCCCGCAGCAGGGCCACCGCCTGCTCGGTCT +
Preference number: 6 (lower is better)
Translates to: RAPAAPCRSAGP*GPAAGPPPARS
Trigger: AGACCGAGCAGGCGGTGGCCCTGCTGCGGGACCGCACGGGCCAGCAGAGCGACACGGCGCAGCTGGAGCTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 72 bp CTACGTGCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTaGCGTTGCTCACCAGCACCCGCAGGTCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: LRAPGAGGACPR*RCSPAPAGPAA
Trigger: GGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGCACGTAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CAA 90 bp ATGCCTACGTGCGCCAGGCGCAGGCGGCGCGTGTCCTCGCTGGCGTaGCTCACCAGCACCCGCAGGTCCTGCAGCCGCGTGCGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: MPTCARRRRRVSSLA*LTSTRRSCSRVRWR
Trigger: CCTCCACCGCACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACGCCAGCGAGGACACGCGCCGCCTGCGCCTGGCGCACGTAGGCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 72 bp TGCGGTGGAGGGCCACGTCGTAGGACAGGCTGTGGTTaGGGCCGCGCAGCACGCCGCCCACGTCGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: CGGGPRRRTGCG*GRAARRPRRPA
Trigger: AGCTGGCCGACGTGGGCGGCGTGCTGCGCGGCCTCAACCACAGCCTGTCCTACGACGTGGCCCTCCACCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp CGTTGCTCACCAGCACCCGCAGGTCCTGCAGCCGCGTaGGGTGGAGGGCCACGTCGTAGGACAGGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RCSPAPAGPAAA*GGGPRRRTGCG
Trigger: ACCACAGCCTGTCCTACGACGTGGCCCTCCACCGCACGCGGCTGCAGGACCTGCGGGTGCTGGTGAGCAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 72 bp CCGCTGCACTGCGCCCGCCAGCGCCAGCAACGAGTCTaGCTGGTTCTGCAGCGCGTCCTGCACCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: PLHCARQRQQRV*LVLQRVLHLPH
Trigger: GTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGCAGTGCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GCGCCCGCCAGCGCCAGCAACGAGTCTGACTGGTTCTaGAGCGCGTCCTGCACCTTCCACACCTGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: APASASNESDWF*SASCTFHTCSV
Trigger: GACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GGCCCGCGTGGCGCCTCAGCAGCAGCTGGCTACTGTTaGTCTCCACCTGCAGCTGGTAGAGCTCCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: GPRGASAAAGYC*SPPAAGRAPAA
Trigger: CGCAGCTGGAGCTCTACCAGCTGCAGGTGGAGAGCAACAGTAGCCAGCTGCTGCTGAGGCGCCACGCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GTGACCGCGTTGAGCATGGCCAGCTCCTGCTTCAGCTaGAGCTCCATGCCTACGTGCGCCAGGCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: VTALSMASSCFS*SSMPTCARRRR
Trigger: CCGCCTGCGCCTGGCGCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCTCAACGCGGTCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp GACTGGTTCTGCAGCGCGTCCTGCACCTTCCACACCTaGTCCGTCAGGTCCGCTTGCAGCGGAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: DWFCSASCTFHT*SVRSACSGACS
Trigger: GCTGCAGGCTCCGCTGCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 72 bp TGCACTGCGCCCGCCAGCGCCAGCAACGAGTCTGACTaGTTCTGCAGCGCGTCCTGCACCTTCCACACCTGC +
Preference number: 6 (lower is better)
Translates to: CTAPASASNESD*FCSASCTFHTC
Trigger: GCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGCGCTGGCGGGCGCAGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 72 bp CAGCTTCCCATCATCGCCCTTGGGCCCGGGCAATCCTaGGGTACCTCTCTCCCCGGGCAGACCTCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: QLPIIALGPGQS*GTSLPGQTSKS
Trigger: GGACTTCGAGGTCTGCCCGGGGAGAGAGGTACCCCAGGATTGCCCGGGCCCAAGGGCGATGATGGGAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000518030.1
ENST00000524352.5
CDS TCA 72 bp GTCGTGGTACACTTCCACGCGGCCCTCGTGCGGACCTaGGCCATTCACCAGGCGGATCATCATCGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: VVVHFHAALVRT*AIHQADHHRGL
Trigger: GAGGCCCCGATGATGATCCGCCTGGTGAATGGCTCAGGTCCGCACGAGGGCCGCGTGGAAGTGTACCACGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp AGGTCCTCGGTGACCGCGTTGAGCATGGCCAGCTCCTaGTTCAGCTGCAGCTCCATGCCTACGTGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: RSSVTALSMASS*FSCSSMPTCAR
Trigger: CCTGGCGCACGTAGGCATGGAGCTGCAGCTGAAGCAGGAGCTGGCCATGCTCAACGCGGTCACCGAGGACCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp TCCCGGTGGCCCTTTCGCGAGGGAGATGTTCCGCAGTaGGATGGAGTGCTCCCAGTCCTTGAGGCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SRWPFREGDVPQ*DGVLPVLEAQV
Trigger: GACCTGCGCCTCAAGGACTGGGAGCACTCCATCGCACTGCGGAACATCTCCCTCGCGAAAGGGCCACCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CAA 90 bp AGCCGCAGCTGCAAGTCCCGGAAGCTCTCATTCAGCCGGTTCACATaGCGAGTCAGGGCCTTCAGGTCGTCAGGGGAGCTGCGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: SRSCKSRKLSFSRFT*RVRAFRSSGELRGL
Trigger: CAGGCCGCGCAGCTCCCCTGACGACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAATGAGAGCTTCCGGGACTTGCAGCTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CAA 90 bp TTCGCGAGGGAGATGTTCCGCAGTGCGATGGAGTGCTCCCAGTCCTaGAGGCGCAGGTCCTCGGTGACCGCGTTGAGCATGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FAREMFRSAMECSQS*RRRSSVTALSMASS
Trigger: GGAGCTGGCCATGCTCAACGCGGTCACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTCCATCGCACTGCGGAACATCTCCCTCGCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 72 bp TCTGAGGAGGCACCGGCAGCTCCTCTAGGTACTGCCTaGGATGCGAACTGCAGCTGCTCTCGCCGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SEEAPAAPLGTA*DANCSCSRRQS
Trigger: GGACTGGCGGCGAGAGCAGCTGCAGTTCGCATCTCAGGCAGTACCTAGAGGAGCTGCCGGTGCCTCCTCAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354914.8
CDS GCA 72 bp GCCAGCAACGAGTCTGACTGGTTCTGCAGCGCGTCCTaGACCTTCCACACCTGCTCCGTCAGGTCCGCTTGC +
Preference number: 6 (lower is better)
Translates to: ASNESDWFCSAS*TFHTCSVRSAC
Trigger: GCAAGCGGACCTGACGGAGCAGGTGTGGAAGGTGCAGGACGCGCTGCAGAACCAGTCAGACTCGTTGCTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS GCA 72 bp CAACGCCGGTCGTGGTACACTTCCACGCGGCCCTCGTaGGGACCTGAGCCATTCACCAGGCGGATCATCATC +
Preference number: 6 (lower is better)
Translates to: QRRSWYTSTRPS*GPEPFTRRIII
Trigger: GATGATGATCCGCCTGGTGAATGGCTCAGGTCCGCACGAGGGCCGCGTGGAAGTGTACCACGACCGGCGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp TCCAGATCCTCCCAGTGCCTTGCCCGAATCGAGCTGTaGGGTACACCTCCTCCACACCGCGGAAGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: SRSSQCLARIEL*GTPPPHRGSRA
Trigger: TGCTCGGCTTCCGCGGTGTGGAGGAGGTGTACCGCACAGCTCGATTCGGGCAAGGCACTGGGAGGATCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp TCAGGGCCGACAGGGACCCCAGCTGGGTACAGCAGATaGTTGCCCGCCGTTTGTGACATGGACCATCCTCAC +
Preference number: 6 (lower is better)
Translates to: SGPTGTPAGYSR*LPAVCDMDHPH
Trigger: GTGAGGATGGTCCATGTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTCGGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS GCA 72 bp CATTGCGAGTCAGGGCCTTCAGGTCGTCAGGGGAGCTaGGCGGCCTGGACACATCCTCACACAGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HCESGPSGRQGS*AAWTHPHTGSA
Trigger: AGCTGAACCTGTGTGAGGATGTGTCCAGGCCGCGCAGCTCCCCTGACGACCTGAAGGCCCTGACTCGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518030.1
CDS CAA 72 bp GGGCCGACAGGGACCCCAGCTGGGTACAGCAGATGCTaGCCCGCCGTTTGTGACATGGACCATCCTCACACA +
Preference number: 6 (lower is better)
Translates to: GPTGTPAGYSRC*PAVCDMDHPHT
Trigger: TGTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS CAA 72 bp GAGATGTTCCGCAGTGCGATGGAGTGCTCCCAGTCCTaGAGGCGCAGGTCCTCGGTGACCGCGTTGAGCATG +
Preference number: 6 (lower is better)
Translates to: EMFRSAMECSQS*RRRSSVTALSM
Trigger: CATGCTCAACGCGGTCACCGAGGACCTGCGCCTCAAGGACTGGGAGCACTCCATCGCACTGCGGAACATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS TCA 72 bp TGGTGCCTGGTCCTGGGTAGCGATCAGGAGATGTTCTaGGGAGGCACCGGCAGCTCCTCTAGGTACTGCCTG +
Preference number: 6 (lower is better)
Translates to: WCLVLGSDQEMF*GGTGSSSRYCL
Trigger: CAGGCAGTACCTAGAGGAGCTGCCGGTGCCTCCTCAGAACATCTCCTGATCGCTACCCAGGACCAGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp AGCCAGCCAAATCCAGATGGAGTCATAGAAAGGGGCTaGAGGGGCGCCCAGGGACGAGTCTCAGAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: SQPNPDGVIERG*RGAQGRVSEQD
Trigger: GTCCTGCTCTGAGACTCGTCCCTGGGCGCCCCTGCAGCCCCTTTCTATGACTCCATCTGGATTTGGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS GCA 72 bp GCAAGTCCCGGAAGCTCTCATTCAGCCGGTTCACATTaGGAGTCAGGGCCTTCAGGTCGTCAGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ASPGSSHSAGSH*ESGPSGRQGSC
Trigger: GCAGCTCCCCTGACGACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAATGAGAGCTTCCGGGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CAA 90 bp CATGCTTCAGGGCCGACAGGGACCCCAGCTGGGTACAGCAGATGCTaGCCCGCCGTTTGTGACATGGACCATCCTCACACAGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HASGPTGTPAGYSRC*PAVCDMDHPHTGSA
Trigger: AGCTGAACCTGTGTGAGGATGGTCCATGTCACAAACGGCGGGCAAGCATCTGCTGTACCCAGCTGGGGTCCCTGTCGGCCCTGAAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS TCA 72 bp CTCCATCACACCCTGCAACAGCTGAGTGCCCCTGGCTaGGGCTGTAGAGCCTTGTCCCCTCAGATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LHHTLQQLSAPG*GCRALSPQISA
Trigger: TGCTGAGATCTGAGGGGACAAGGCTCTACAGCCTCAGCCAGGGGCACTCAGCTGTTGCAGGGTGTGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS CAA 72 bp TGCAAGTCCCGGAAGCTCTCATTCAGCCGGTTCACATaGCGAGTCAGGGCCTTCAGGTCGTCAGGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: CKSRKLSFSRFT*RVRAFRSSGEL
Trigger: CAGCTCCCCTGACGACCTGAAGGCCCTGACTCGCAATGTGAACCGGCTGAATGAGAGCTTCCGGGACTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000518030.1
ENST00000524352.5
CDS CCA 72 bp CTCCAGCCTCTGAACCTCCAAACTTATGGGGCTGCTTaGGGGACAGCTAGCCCTGTGCCAACACCATATCCC +
Preference number: 6 (lower is better)
Translates to: LQPLNLQTYGAA*GTASPVPTPYP
Trigger: GGGATATGGTGTTGGCACAGGGCTAGCTGTCCCCCAAGCAGCCCCATAAGTTTGGAGGTTCAGAGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524352.5
CDS CAA 72 bp CTGCGCGGCCTGGACACATCCTCACACAGGTTCAGCTaGGACAGGCTCCTGCCATCAAAGGAATCCTCACAG +
Preference number: 6 (lower is better)
Translates to: LRGLDTSSHRFS*DRLLPSKESSQ
Trigger: CTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGTGTCCAGGCCGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518030.1
CDS CAA 90 bp CTGTGCAGGACCCCGAACTTGGGCTCTGCCCACTTTCAGTGTCTGTaGCATGTCACGCTGGCATCTTCGGCATGTCCACAGTTTGTCACC +
Preference number: 6 (lower is better)
Translates to: LCRTPNLGSAHFQCL*HVTLASSACPQFVT
Trigger: GGTGACAAACTGTGGACATGCCGAAGATGCCAGCGTGACATGCAACAGACACTGAAAGTGGGCAGAGCCCAAGTTCGGGGTCCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS CCA 72 bp TGCGCGGCCTGGACACATCCTCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAAAGGAATCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: CAAWTHPHTGSA*TGSCHQRNPHR
Trigger: TCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGTGTCCAGGCCGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518030.1
CDS CAA 72 bp ACCCCGAACTTGGGCTCTGCCCACTTTCAGTGTCTGTaGCATGTCACGCTGGCATCTTCGGCATGTCCACAG +
Preference number: 6 (lower is better)
Translates to: TPNLGSAHFQCL*HVTLASSACPQ
Trigger: CTGTGGACATGCCGAAGATGCCAGCGTGACATGCAACAGACACTGAAAGTGGGCAGAGCCCAAGTTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354914.8
ENST00000380385.6
CDS GCA 72 bp GACCATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCACAGATGGAGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: DHPHTGSAWTGS*HQRNPHRWSWC
Trigger: ACACCAGCTCCATCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5
CDS GCA 72 bp ACACATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGAATCCTCACAGATGGAGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: THPHTGSAWTGS*HQRNPHRWSWC
Trigger: ACACCAGCTCCATCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518030.1
CDS CCA 72 bp GTTTGTGACATGGACCATCCTCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAAAGGAATCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: VCDMDHPHTGSA*TGSCHQRNPHR
Trigger: TCTGTGAGGATTCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTCCATGTCACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354914.8
ENST00000380385.6
ENST00000524352.5