RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAPER (Homo sapiens)

Ensembl gene IDs: ENSG00000140386

Ensembl transcript IDs: ENST00000303521.10, ENST00000324767.11, ENST00000538941.6, ENST00000562948.1, ENST00000563246.1, ENST00000563290.6, ENST00000563688.5, ENST00000563919.1, ENST00000564022.1, ENST00000564177.1, ENST00000564590.5, ENST00000564757.5, ENST00000565372.5, ENST00000565507.5, ENST00000565970.5, ENST00000567618.5, ENST00000568428.5, ENST00000568549.5, ENST00000569395.5, ENST00000569784.1

Found 420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCTGCACTGTCATTGGTGGGCAAGACTGGGCGGGTGTTATTTCTaGAGAAGCAGTAGAGCCTGTATGATGAGCCTTTACCTTGTCAGC +
Preference number: 1 (lower is better)
Translates to: LLHCHWWARLGGCYF*RSSRACMMSLYLVS
Trigger: GCTGACAAGGTAAAGGCTCATCATACAGGCTCTACTGCTTCTTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 90 bp GCTTCTTGTTCTTTCCTCTTCATTAACAATTCTTCTACACGGGCCTaGCGCTCTGCCTCTAGAGCTCTCTTGCGTTCCTGCACAGCTTCA +
Preference number: 1 (lower is better)
Translates to: ASCSFLFINNSSTRA*RSASRALLRSCTAS
Trigger: TGAAGCTGTGCAGGAACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAATGAAGAGGAAAGAACAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR TCA 90 bp TCCTGCACAGCTTCATCACGTGCTTGCTTTTCTTCCTGTCTTCTCTaGCGCTCTTCCTGTAGCTCATTAAGCCTCTGTTCATATTCCTTC +
Preference number: 1 (lower is better)
Translates to: SCTASSRACFSSCLL*RSSCSSLSLCSYSF
Trigger: GAAGGAATATGAACAGAGGCTTAATGAGCTACAGGAAGAGCGTCAGAGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGCTGTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR TCA 90 bp GCAATTGTTCTTTTACGAGAGGGTGAAGAAAGTTTTTCATGCATGTaGATTCCATGCCCTGGAGGTCTAGCAGGTTCTTCTTCTACAATG +
Preference number: 1 (lower is better)
Translates to: AIVLLREGEESFSCM*IPCPGGLAGSSSTM
Trigger: CATTGTAGAAGAAGAACCTGCTAGACCTCCAGGGCATGGAATTCACATGCATGAAAAACTTTCTTCACCCTCTCGTAAAAGAACAATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 90 bp GCTGGAAATTTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTaGAGCATAACTGAAACACACTCTGTATCAATGTGGACAGCAGAT +
Preference number: 1 (lower is better)
Translates to: AGNFSSFTCKGGVPA*SITETHSVSMWTAD
Trigger: ATCTGCTGTCCACATTGATACAGAGTGTGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAAATTTCCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp TGTGAGTGCTGCCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTGCATCTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: CECCQSFFPVSSSFPGCILREAF*TVIGGQ
Trigger: TTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAA...GATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR CCA 90 bp TGTGAGTGCTGCCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTGCATCATTGGTGGGCAAGACTaGGCGGGTGTTATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: CECCQSFFPVSSSFPGCIIGGQD*AGVISE
Trigger: TTCAGAAATAACACCCGCCCAGTCTTGCCCACCAAT...GATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACCGTTCATTTTTGCGTaGGGCCTTCTGCACTGTCAT +
Preference number: 2 (lower is better)
Translates to: APRLTSFIICKDIVPVHGPFIFA*GLLHCH
Trigger: ATGACAGTGCAGAAGGCCTCACGCAAAAATGAACGG...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp ATTAACAATTCTTCTACACGGGCCTGCCGCTCTGCCTCTAGAGCTCTCTTGCGTTACTTCCCATGCCAATaGTGTTGGTCTGCTTTGAGC +
Preference number: 2 (lower is better)
Translates to: INNSSTRACRSASRALLRYFPCQ*CWSALS
Trigger: GCTCAAAGCAGACCAACATCATTGGCATGGGAAGTA...ACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp ATTAACAATTCTTCTACACGGGCCTGCCGCTCTGCCTCTAGAGCTCTCTTGCGTCTTTCCGTTCATTTTTaGGTGAGGCCTTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: INNSSTRACRSASRALLRLSVHF*VRPSAL
Trigger: CAGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAG...ACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR CAA 90 bp TCTAGCTCTTTCCCGGGCTGCATCCTCACGGGCTTTTTCCTTTTCTaGCCTCTGTTGTTCAATTCGGGCTTCTTGTTCTTTCCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: SSSFPGCILTGFFLF*PLLFNSGFLFFPLH
Trigger: ATGAAGAGGAAAGAACAAGAAGCCCGAATTGAACAACAGAGGCAAGAAAAGGAAAAAGCCCGTGAGGATGCAGCCCGGGAAAGAGCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR CCA 90 bp ATTAACAATTCTTCTACACGGGCCTGCCGCTCTGCCTCTAGAGCTCTCTTGCGTCATCGTTCCAGTCCATaGACATACCACAGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: INNSSTRACRSASRALLRHRSSP*TYHRKK
Trigger: TTTCTTTCTGTGGTATGTCCATGGACTGGAACGATG...ACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp ACATGGCGTCCCGGAGACATCTTCTTTACTTCCCATGCCAATGATGTTGGTCTGTCAATTTTCCGAGGGTaGCTTGTTTTAGTGGGACTT +
Preference number: 2 (lower is better)
Translates to: TWRPGDIFFTSHANDVGLSIFRG*LVLVGL
Trigger: AAGTCCCACTAAAACAAGGCACCCTCGGAAAATTGA...CAGACCAACATCATTGGCATGGGAAGTAAAGAAGATGTCTCCGGGACGCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp TGTGAGTGCTGCCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTGCATCATAGATTTCATCTACTaGTCGGCGAAGATTATCAAA +
Preference number: 2 (lower is better)
Translates to: CECCQSFFPVSSSFPGCIIDFIY*SAKIIK
Trigger: TTTGATAATCTTCGCCGAGCAGTAGATGAAATCTAT...GATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR CCA 90 bp ACATGGCGTCCCGGAGACATCTTCTTTACTTCCCATGCCAATGATGTTGGTCTGGTACTACGCTATTGCTaGGAGTGTAAATTAGTTCGG +
Preference number: 2 (lower is better)
Translates to: TWRPGDIFFTSHANDVGLVLRYC*ECKLVR
Trigger: CCGAACTAATTTACACTCCCAGCAATAGCGTAGTAC...CAGACCAACATCATTGGCATGGGAAGTAAAGAAGATGTCTCCGGGACGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGGAGGAGCTGGCACTGTaGCAGTTGAACCTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWEELAL*QLNLQN
Trigger: ATTTTGGAGGTTCAACTGGCACAGTGCCAGCTCCTC...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGGATGTTGGTCTGCTTTaGGCATCTGTCTTCTCTAGC +
Preference number: 2 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWDVGLL*ASVFSS
Trigger: GCTAGAGAAGACAGATGCTCAAAGCAGACCAACATC...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp CCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACATGCAGTACTACGCTATTaGTGGGAGTGTAAATTAGTT +
Preference number: 2 (lower is better)
Translates to: PRLTSFIICKDIVPVHGHAVLRY*WECKLV
Trigger: AACTAATTTACACTCCCAGCAATAGCGTAGTACTGC...ATGTCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR CAA 90 bp TTCGTCGAGCATTTGATGTTACATTTATTCTATCTGTTGATGGACTaGGAATCACATGGCGTCCCGGAGACATCTTCTTTACTTCCCATG +
Preference number: 2 (lower is better)
Translates to: FVEHLMLHLFYLLMD*ESHGVPETSSLLPM
Trigger: CATGGGAAGTAAAGAAGATGTCTCCGGGACGCCATGTGATTCCAAGTCCATCAACAGATAGAATAAATGTAACATCAAATGCTCGACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTCGGGCAGACCAATaGATACAACGCCCTAAGTTG +
Preference number: 2 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVRADQ*IQRPKL
Trigger: CAACTTAGGGCGTTGTATTCATTGGTCTGCCCGAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
3UTR-3UTR TCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACGACCACACTCTGATCTaGTTCGCAAGTTACATAGAT +
Preference number: 2 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNDHTLI*FASYID
Trigger: ATCTATGTAACTTGCGAATCAGATCAGAGTGTGGTC...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGCCATCTCCAACAAATTaGCCTTTCTGTATGCTTTCA +
Preference number: 2 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWPSPTN*PFCMLS
Trigger: TGAAAGCATACAGAAAGGTCAATTTGTTGGAGATGG...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
3UTR-3UTR GCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGTATTTTACAGTCCACTaGAGTACTACGCTATTGCTG +
Preference number: 2 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWYFTVH*STTLLL
Trigger: CAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATA...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATTTCAGCTCGGCAATaGCAAGAGAGGATTATCTGC +
Preference number: 2 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRISARQ*QERIIC
Trigger: GCAGATAATCCTCTCTTGGCATTGCCGAGCTGAAAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
3UTR CAA 90 bp AATTTAAGCTTCGTCGAGCATTTGATGTTACATTTATTCTATCTGTaGATGGACTTGGAATCACATGGCGTCCCGGAGACATCTTCTTTA +
Preference number: 2 (lower is better)
Translates to: NLSFVEHLMLHLFYL*MDLESHGVPETSSL
Trigger: TAAAGAAGATGTCTCCGGGACGCCATGTGATTCCAAGTCCATCAACAGATAGAATAAATGTAACATCAAATGCTCGACGAAGCTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTCATTCGACCACACTCTaGTCTGATTCGCAAGTTACA +
Preference number: 2 (lower is better)
Translates to: NTLCINVDSRYFRSSNIIHSTTL*SDSQVT
Trigger: TGTAACTTGCGAATCAGATCAGAGTGTGGTCGAATG...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTACAACGCCCTAAGTTaGTTTCAAATAGCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYNALS*FQIAPK
Trigger: TTTGGGGGCTATTTGAAATCAACTTAGGGCGTTGTA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
3UTR-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCCATATCTACAGTGTaGGAAGAGTATAAACATGGG +
Preference number: 2 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRAISTV*EEYKHG
Trigger: CCCATGTTTATACTCTTCCCACACTGTAGATATGGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
3UTR-3UTR CCA 90 bp TTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTGCAGCATAACTGAAACATTTTCGGCAAGAGGATaGTCACAAGAGTGTAATGAG +
Preference number: 2 (lower is better)
Translates to: FSSFTCKGGVPACSITETFSARG*SQECNE
Trigger: CTCATTACACTCTTGTGACCATCCTCTTGCCGAAAA...TGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR TCA 72 bp AGCCTGTATGATGAGCCTTTACCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGACGAGGAGCTGGCACTG +
Preference number: 3 (lower is better)
Translates to: SLYDEPLPCQPN*HLWEPDEELAL
Trigger: CAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGGTAAAGGCTCATCATACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 72 bp TCAGCATCTTTCCGTTCATTTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAAGACTGGGCGGGTGTT +
Preference number: 3 (lower is better)
Translates to: SASFRSFLREAF*TVIGGQDWAGV
Trigger: AACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAGATGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 72 bp CAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTaGATCCTCACGGGCTTTTTCCTTTTCTTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: QSFFPVSSSFPG*ILTGFFLFLPL
Trigger: CAGAGGCAAGAAAAGGAAAAAGCCCGTGAGGATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 72 bp TCTTTCCTCTTCATTAACAATTCTTCTACACGGGCCTaGCGCTCTGCCTCTAGAGCTCTCTTGCGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: SFLFINNSSTRA*RSASRALLRSC
Trigger: GCAGGAACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAATGAAGAGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 72 bp CTCTTCCATAGCTTCTTGTTGAGCAGCTGTGAGTGCTaGCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCG +
Preference number: 3 (lower is better)
Translates to: LFHSFLLSSCEC*QSFFPVSSSFP
Trigger: CGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACAGCTGCTCAACAAGAAGCTATGGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR TCA 72 bp TGTCATTGGTGGGCAAGACTGGGCGGGTGTTATTTCTaGAGAAGCAGTAGAGCCTGTATGATGAGCCTTTAC +
Preference number: 3 (lower is better)
Translates to: CHWWARLGGCYF*RSSRACMMSLY
Trigger: GTAAAGGCTCATCATACAGGCTCTACTGCTTCTTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR CCA 72 bp GAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATaGACATACCACAGAAAGAAACACTCCCACTGCCCA +
Preference number: 3 (lower is better)
Translates to: ELHNLQGHRSSP*TYHRKKHSHCP
Trigger: TGGGCAGTGGGAGTGTTTCTTTCTGTGGTATGTCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR TCA 72 bp GCTTCATCACGTGCTTGCTTTTCTTCCTGTCTTCTCTaGCGCTCTTCCTGTAGCTCATTAAGCCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: ASSRACFSSCLL*RSSCSSLSLCS
Trigger: TGAACAGAGGCTTAATGAGCTACAGGAAGAGCGTCAGAGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR CAA 90 bp CTGTGTTCACATTTGTGGCTGGGACTACTGCTTGAAGGATGTGTTCAAGGGCTGTGCCACATTCATAATTaGTATCTCCAGCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: LCSHLWLGLLLEGCVQGLCHIHN*YLQLLM
Trigger: CATCAACAGCTGGAGATACAAATTATGAATGTGGCA...CAGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
3UTR TCA 72 bp AGAGGATTATCTGCTAGGAGAGTTCGGGCAGACCAATaGATACAACGCCCTAAGTTGATTTCAAATAGCCCC +
Preference number: 3 (lower is better)
Translates to: RGLSARRVRADQ*IQRPKLISNSP
Trigger: GGGGCTATTTGAAATCAACTTAGGGCGTTGTATTCATTGGTCTGCCCGAACTCTCCTAGCAGATAATCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563290.6
3UTR TCA 72 bp AAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTTaGAGGATGTGTTCAAGGGCTGTTAATCCACCAGCA +
Preference number: 3 (lower is better)
Translates to: KTVFTFVAGTTA*RMCSRAVNPPA
Trigger: TGCTGGTGGATTAACAGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
3UTR TCA 72 bp CTTTTACGAGAGGGTGAAGAAAGTTTTTCATGCATGTaGATTCCATGCCCTGGAGGTCTAGCAGGTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LLREGEESFSCM*IPCPGGLAGSS
Trigger: AGAAGAACCTGCTAGACCTCCAGGGCATGGAATTCACATGCATGAAAAACTTTCTTCACCCTCTCGTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR-3UTR CAA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGTCTTTCCGTTCATTTTaGCGTGAGGCCTTCTGCACT +
Preference number: 3 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLSFRSF*REAFCT
Trigger: AGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAGA...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR GCA 72 bp TTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTaGAGCATAACTGAAACACACTCTGTATCAATGTGG +
Preference number: 3 (lower is better)
Translates to: FSSFTCKGGVPA*SITETHSVSMW
Trigger: CCACATTGATACAGAGTGTGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGATCCTGCCCCGTTTCCTaGGCAGAGCCCCGACCGCCC +
Preference number: 4 (lower is better)
Translates to: APRLTSFIICKDIVPVHGSCPVS*AEPRPP
Trigger: GGGCGGTCGGGGCTCTGCCCAGGAAACGGGGCAGGA...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp TTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCAAGCTCTTTCCCGGGCTaGATCCTCACGGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSAQLTPVGARRGAGTVPSSFPG*ILTGFF
Trigger: GAAAAAGCCCGTGAGGATGCAGCCCGGGAAAGAGCT...TGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp TTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCATCTTCCTGTCTTCTCTaGCGCTCTTCCTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSAQLTPVGARRGAGTVPSSCLL*RSSCSS
Trigger: TGAGCTACAGGAAGAGCGTCAGAGAAGACAGGAAGA...TGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp CTTTACCTTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTACTTCCCATGCCAATaGTGTTGGTCTGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LYLVSPTDTCGSQTRSWHYFPCQ*CWSALS
Trigger: GCTCAAAGCAGACCAACATCATTGGCATGGGAAGTA...GTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp TTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCAATCATCCTGCGTCGTTaGTCTAGCAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSAQLTPVGARRGAGTVPIILRR*SSNSSF
Trigger: GAAGGAAGAATTGCTAGATCAACGACGCAGGATGAT...TGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCACTTTGTCATGACTATTaGAGCGCTGGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSAQLTPVGARRGAGTVPLCHDY*SAGMKP
Trigger: TGGCTTCATTCCAGCGCTCCAATAGTCATGACAAAG...TGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp TTGTCAGCCCAACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCATCAATTTTCCGAGGGTaGCTTGTTTTAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: LSAQLTPVGARRGAGTVPSIFRG*LVLVGL
Trigger: AAGTCCCACTAAAACAAGGCACCCTCGGAAAATTGA...TGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACCTCTAGAGCTCTCTTaGGTTCCTGCACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: APRLTSFIICKDIVPVHGPLELS*VPAQLH
Trigger: ATGAAGCTGTGCAGGAACGCAAGAGAGCTCTAGAGG...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TATCCAGCATCATTAGCACCTCCTTACATTCGACCACACTCTGATCTGATTCGCCTTCTGCACTGTCATTaGTGGGCAAGACTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: YPASLAPPYIRPHSDLIRLLHCH*WARLGG
Trigger: CCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAG...GCGAATCAGATCAGAGTGTGGTCGAATGTAAGGAGGTGCTAATGATGCTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR CAA 72 bp TCCGTTCATTTTTGCGTGAGGCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGGGTGTTATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVHFCVRPSALS*VGKTGRVLFLK
Trigger: CTTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGAACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp AAGGACATCGTTCCAGTCCATGGACATACCACAGAAAGAAACACTCCCACTGCCCTTGTTGAGCAGCTGTaGGTGCTGCCAATCGTTCTT +
Preference number: 4 (lower is better)
Translates to: KDIVPVHGHTTERNTPTALVEQL*VLPIVL
Trigger: AAGAACGATTGGCAGCACTCACAGCTGCTCAACAAG...GGCAGTGGGAGTGTTTCTTTCTGTGGTATGTCCATGGACTGGAACGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCCCCCGACCGCCCTaGTTAGTTCGGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLPRPP*LVRGGS
Trigger: TGAGCCGCCCCGAACTAAGCAGGGCGGTCGGGGGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp TCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTGAGCCCCGACCGCCCTaGTTAGTTCGGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SNIIVSNTARILHIIQCTEPRPP*LVRGGS
Trigger: TGAGCCGCCCCGAACTAAGCAGGGCGGTCGGGGCTC...AGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp ACATGGCGTCCCGGAGACATCTTCTTTACTTCCCATGCCAATGATGTTGGTCTGTCCCACTGCCCATGCTaGCAGAAAAATCACTGTCGT +
Preference number: 4 (lower is better)
Translates to: TWRPGDIFFTSHANDVGLSHCPC*QKNHCR
Trigger: ACGACAGTGATTTTTCTGCCAGCATGGGCAGTGGGA...CAGACCAACATCATTGGCATGGGAAGTAAAGAAGATGTCTCCGGGACGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp AGGGTGCCTTGTTTTAGTGGGACTTTTATCAAAGTGTTTATCTCCAGTCGTAGACCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RVPCFSGTFIKVFISSRRPCQPN*HLWEPD
Trigger: GTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGG...TCTACGACTGGAGATAAACACTTTGATAAAAGTCCCACTAAAACAAGGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGAAGTTTTTCATGCATGTaGATTCCATGCCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: APRLTSFIICKDIVPVHGSFSCM*IPCPGG
Trigger: ACCTCCAGGGCATGGAATTCACATGCATGAAAAACT...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGCCCACTACTCCCAGGTaGGAGAGGCTCTTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLPTTPR*ERLFAP
Trigger: AGGGGCGAAGAGCCTCTCGCACCTGGGAGTAGTGGG...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGCTTCTGCACTGTCATTaGTGGGCAAGACTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWLLHCH*WARLGG
Trigger: CCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAG...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTGCAGCACTGTGGGGTaGCGGCCGGACTGCACGATC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRCSTVG*RPDCTI
Trigger: GATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCTTCTGCAGCACTGTaGGGTGGCGGCCGGACTGCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRASAAL*GGGRTA
Trigger: TGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp CCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACATGATGTTGGTCTGCTTTaGGCATCTGTCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PRLTSFIICKDIVPVHGHDVGLL*ASVFSS
Trigger: GCTAGAGAAGACAGATGCTCAAAGCAGACCAACATC...ATGTCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp CATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGCCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HNCLEYCQNSSHHPMYSLPCQPN*HLWEPD
Trigger: GTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGG...CAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCCAGGTCGGTTGCCTaGAGAGCAGCTGTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRARSVA*RAAVSP
Trigger: AGGGCTGACAGCTGCTCTTCAGGCAACCGACCTGGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTACGCTATTGCTGGGAGGAGCTGGCACTGTaGCAGTTGAACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PVVDDVILQSTAVLRYCWEELAL*QLNLQN
Trigger: ATTTTGGAGGTTCAACTGGCACAGTGCCAGCTCCTC...CCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGATTTTCGGCAAGAGGATaGTCACAAGAGTGTAATGAG +
Preference number: 4 (lower is better)
Translates to: APRLTSFIICKDIVPVHGFSARG*SQECNE
Trigger: CTCATTACACTCTTGTGACCATCCTCTTGCCGAAAA...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TGTGAGTGCTGCCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTGCATCCAAGGACTTCTGCCATaGAATTTGAAATATCTGAAG +
Preference number: 4 (lower is better)
Translates to: CECCQSFFPVSSSFPGCIQGLLP*NLKYLK
Trigger: CTTCAGATATTTCAAATTCCATGGCAGAAGTCCTTG...GATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGCCCAGCAGGGAGCTaGCCATGTGCCGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGPAGS*PCAGMQ
Trigger: TTGCATTCCGGCACATGGCCAGCTCCCTGCTGGGCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TGTGAGTGCTGCCAATCGTTCTTCCCTGTCTCTAGCTCTTTCCCGGGCTGCATCTATCACATAAACCCATaGAGTATGACTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CECCQSFFPVSSSFPGCIYHINP*SMTPGK
Trigger: TTTTCCAGGAGTCATACTCCATGGGTTTATGTGATA...GATGCAGCCCGGGAAAGAGCTAGAGACAGGGAAGAACGATTGGCAGCACTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPCQPN*HLWEPD
Trigger: GTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTGCTGGGACTACTGCTTaGAGGATGTGTTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DLGGILKTVFTFVAGTTAAGTTA*RMCSRA
Trigger: AGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGC...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCTTGGGACTGGCAGTaGTGGGGTCCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPWDWQ*WGPRWC
Trigger: GCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGCCATGTGCCGGAATaGAAGGGACAAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGHVPE*KGQALC
Trigger: GCAGAGGGCTTGTCCCTTGCATTCCGGCACATGGCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGGTGGCGGCCGGACTaGACGATCACCTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGWRPD*TITWLS
Trigger: AGATAACCAGGTGATCGTGCAGTCCGGCCGCCACCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp ATTAACAATTCTTCTACACGGGCCTGCCGCTCTGCCTCTAGAGCTCTCTTGCGTGCTTCGTCGAGCATTTaGTGTTACATTTATTCTATC +
Preference number: 4 (lower is better)
Translates to: INNSSTRACRSASRALLRASSSI*CYIYSI
Trigger: GATAGAATAAATGTAACATCAAATGCTCGACGAAGC...ACGCAAGAGAGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGAATTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp ACATGGCGTCCCGGAGACATCTTCTTTACTTCCCATGCCAATGATGTTGGTCTGCCATCTCCAACAAATTaGCCTTTCTGTATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TWRPGDIFFTSHANDVGLPSPTN*PFCMLS
Trigger: TGAAAGCATACAGAAAGGTCAATTTGTTGGAGATGG...CAGACCAACATCATTGGCATGGGAAGTAAAGAAGATGTCTCCGGGACGCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGATCTTTTACGAGAGGGTaGAGAAAGTTTTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: APRLTSFIICKDIVPVHGSFTRG*RKFFMH
Trigger: ATGCATGAAAAACTTTCTTCACCCTCTCGTAAAAGA...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGCACTCCCACTGCCCATaGTGGCAGAAAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWHSHCP*WQKNHC
Trigger: ACAGTGATTTTTCTGCCAGCATGGGCAGTGGGAGTG...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTTCTACACGGGCCTaGCGCTCTGCCTCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSTRA*RSASRA
Trigger: AGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCATCCACTGGGCCTTaGACCGAGAGGAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSTGP*TERKQA
Trigger: TGCCTGCTTCCTCTCGGTGCAAGGCCCAGTGGATGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCCAGCCAGGTCGGTTaGCTGAAGAGCAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSQVG*LKSSCQ
Trigger: CTGACAGCTGCTCTTCAGGCAACCGACCTGGCTGGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGGGAGCTGGCCATGTaGCGGAATGCAAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRRELAM*RNARDK
Trigger: CTTGTCCCTTGCATTCCGGCACATGGCCAGCTCCCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTCTGCACTGTCATTaGTGGGCAAGACTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLLHCH*WARLGG
Trigger: CCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACCCCCAGGATGTATTTTaGCGCCAAGACTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNPQDVF*RQDSRA
Trigger: AGCTCGTGAGTCTTGGCGCCAAAATACATCCTGGGG...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTGCAGCATAACTGAAACACTCAGCGCACGCATCTaGAAGACGGAGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: FSSFTCKGGVPACSITETLSARI*KTERPF
Trigger: GAATGGCCTCTCCGTCTTCCAGATGCGTGCGCTGAG...TGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp TATCCAGCATCATTAGCACCTCCTTACATTCGACCACACTCTGATCTGATTCGCGACCACACTCTGATCTaGTTCGCAAGTTACATAGAT +
Preference number: 4 (lower is better)
Translates to: YPASLAPPYIRPHSDLIRDHTLI*FASYID
Trigger: ATCTATGTAACTTGCGAATCAGATCAGAGTGTGGTC...GCGAATCAGATCAGAGTGTGGTCGAATGTAAGGAGGTGCTAATGATGCTGGATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGCTGGTTTTCCGCTTaGCCTGGAGTCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGWFSA*PGVCAK
Trigger: TTTGGCACAGACTCCAGGTCAAGCGGAAAACCAGCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTTCCCAGGCCTGCTaGGGAAATCTGTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSQAC*GNLLAS
Trigger: GCTGGCTAACAGATTTCCTCAGCAGGCCTGGGAAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGCTTTCCGTTCATTTTTaGGTGAGGCCTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWLSVHF*VRPSAL
Trigger: CAGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAG...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTTCTTCTACACGGGCCTaGCGCTCTGCCTCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NTLCINVDSRYFRSSNIISSTRA*RSASRA
Trigger: AGCTCTAGAGGCAGAGCGGCAGGCCCGTGTAGAAGA...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGCTCTTTCCCGGGCTaGATCCTCACGGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSFPG*ILTGFF
Trigger: GAAAAAGCCCGTGAGGATGCAGCCCGGGAAAGAGCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AAAGTGTTTATCTCCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTAGCAGCTGTGAGTGCTaGCAATCGTTCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KVFISSRRRCYFTVHCSTSSCEC*QSFFPV
Trigger: GACAGGGAAGAACGATTGGCAGCACTCACAGCTGCT...AGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGGAGATAAACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTCACGCCCCTGGATaGTGGTATTCTCTCTCACGG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVHAPG*WYSLSR
Trigger: CCGTGAGAGAGAATACCAGCATCCAGGGGCGTGAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TATCCAGCATCATTAGCACCTCCTTACATTCGACCACACTCTGATCTGATTCGCCATCGTTCCAGTCCATaGACATACCACAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: YPASLAPPYIRPHSDLIRHRSSP*TYHRKK
Trigger: TTTCTTTCTGTGGTATGTCCATGGACTGGAACGATG...GCGAATCAGATCAGAGTGTGGTCGAATGTAAGGAGGTGCTAATGATGCTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCACGCCCCTGGATGCTaGTATTCTCTCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHAPGC*YSLSRL
Trigger: AAGCCGTGAGAGAGAATACCAGCATCCAGGGGCGTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGGATTCTCATCCACTaGGCCTTGCACCGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGILIH*ALHREE
Trigger: TTCCTCTCGGTGCAAGGCCCAGTGGATGAGAATCCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTGCTGGGGTCCAAGATaGTGCCATGGAAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRCWGPR*CHGRGH
Trigger: GTGTCCTCTTCCATGGCACCATCTTGGACCCCAGCA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCCATAGCTTCTTGTTaGGCAGCTGTGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSIASC*AAVSAA
Trigger: GGCAGCACTCACAGCTGCTCAACAAGAAGCTATGGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCCACTTCTTCATCTaGCAGTTCACGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLHFFI*QFTPLD
Trigger: ATCCAGGGGCGTGAACTGTCAGATGAAGAAGTGGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCTGGGACTACTGCTTaGAGGATGTGTTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRAGTTA*RMCSRA
Trigger: AGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAGACGATGACCTCATaGAGGAGGCTTTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQTMTS*RRLSQE
Trigger: CTCCTGTGAAAGCCTCCTTCATGAGGTCATCGTCTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCAGCCGTGGGTCACTaGAATACTGGAAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSAVGH*NTGRAT
Trigger: AGTTGCCCTTCCAGTATTTCAGTGACCCACGGCTGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLREAF*TVIGGQ
Trigger: TTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSNIIVSNTARILHIIQCLREAF*TVIGGQ
Trigger: TTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAA...ACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp AAGGACATCGTTCCAGTCCATGGACATACCACAGAAAGAAACACTCCCACTGCCATTGACCTTTCTGTATaGTTTCATCAGGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KDIVPVHGHTTERNTPTAIDLSV*FHQVKD
Trigger: GTCTTTTACCTGATGAAAGCATACAGAAAGGTCAAT...GGCAGTGGGAGTGTTTCTTTCTGTGGTATGTCCATGGACTGGAACGATGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp TATCCAGCATCATTAGCACCTCCTTACATTCGACCACACTCTGATCTGATTCGCTTTCTTCCATCATCCTaGGTCGTTGATCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: YPASLAPPYIRPHSDLIRFLPSS*VVDLAI
Trigger: AATTGCTAGATCAACGACGCAGGATGATGGAAGAAA...GCGAATCAGATCAGAGTGTGGTCGAATGTAAGGAGGTGCTAATGATGCTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGGCTTCATCACGTGCTTaGTTTTCTTCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWASSRA*FSSCLL
Trigger: GAGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGC...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGCAGCTGTGAGTGCTaGCAATCGTTCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSCEC*QSFFPV
Trigger: GACAGGGAAGAACGATTGGCAGCACTCACAGCTGCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTGGGGTCCAAGATGGTaGCATGGAAGAGGACACAGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRWGPRW*HGRGHS
Trigger: ACTGTGTCCTCTTCCATGGCACCATCTTGGACCCCA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGGTCACTTGCCATTTTTaGGTGAGGCCTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HNCLEYCQNSSHHPMYSLVTCHF*VRPSAL
Trigger: CAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGAC...CAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGACTTGGAATCACATaGCGTCCCGGAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGLGIT*RPGDIF
Trigger: GAAGATGTCTCCGGGACGCCATGTGATTCCAAGTCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACATTGGTGGGCAAGACTaGGCGGGTGTTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNIGGQD*AGVISE
Trigger: TTCAGAAATAACACCCGCCCAGTCTTGCCCACCAAT...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCCCAGGATGTATTTTaGCGCCAAGACTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPQDVF*RQDSRA
Trigger: AGCTCGTGAGTCTTGGCGCCAAAATACATCCTGGGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGACAGTTCACGCCCCTaGATGCTGGTATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDSSRP*MLVFSL
Trigger: GAGAGAGAATACCAGCATCCAGGGGCGTGAACTGTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp CTGTGTTCACATTTGTGGCTGGGACTACTGCTTGAAGGATGTGTTCAAGGGCTGCAGAGCCAGAATTTTTaGTTTCCATTAAACTCTCAT +
Preference number: 4 (lower is better)
Translates to: LCSHLWLGLLLEGCVQGLQSQNF*FPLNSH
Trigger: ATGAGAGTTTAATGGAAACCAAAAATTCTGGCTCTG...CAGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTGGGGTAGCTGGCTaGCAGTTTCCATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFGVAG*QFPSGR
Trigger: TCGACCAGATGGAAACTGCCAGCCAGCTACCCCAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAGCTGTCAGCCCTGTaGGATCCTGGCGATTATTGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQLSAL*DPGDYC
Trigger: ACAATAATCGCCAGGATCCCACAGGGCTGACAGCTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAATTCTCCTTGGGACTaGCAGTGCTGGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRNSPWD*QCWGPR
Trigger: TCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGAGTGTAATTCTCCTTaGGACTGGCAGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRECNSP*DWQCWG
Trigger: ACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTACTGGAAGGGCAACTaGCAGAGCTTCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYWKGN*QSFCST
Trigger: AGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGGTCACTGAAATACTaGAAGGGCAACTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGSLKY*KGNWQS
Trigger: GCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp CCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTACGCTATTGCTGGGATTTTCCACCAGTTTaGCATTTAGGTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: PVVDDVILQSTAVLRYCWDFPPV*HLGFPS
Trigger: TGATGGAAAACCTAAATGTCAAACTGGTGGAAAATC...CCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCGTTCATTTTTGCGTaGGGCCTTCTGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPFIFA*GLLHCH
Trigger: ATGACAGTGCAGAAGGCCTCACGCAAAAATGAACGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTTCCTGTCTTCTCTaGCGCTCTTCCTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSSCLL*RSSCSS
Trigger: TGAGCTACAGGAAGAGCGTCAGAGAAGACAGGAAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTGTTGAGCAGCTGTaGGTGCTGCCAATCGTTCTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLVEQL*VLPIVL
Trigger: AAGAACGATTGGCAGCACTCACAGCTGCTCAACAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTTCCATAGCTTCTTGTTaGGCAGCTGTGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTLCINVDSRYFRSSNIISIASC*AAVSAA
Trigger: GGCAGCACTCACAGCTGCTCAACAAGAAGCTATGGA...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTATCACTGCAGTTTTCTaGACAGTTATTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: DLGGILKTVFTFVAGTTAITAVF*TVIAGE
Trigger: CTCACCTGCAATAACTGTTCAGAAAACTGCAGTGAT...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGAGGAGCTGGCACTGTaGCAGTTGAACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSREELAL*QLNLQN
Trigger: ATTTTGGAGGTTCAACTGGCACAGTGCCAGCTCCTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTGAGGAGCTGGCACTGTaGCAGTTGAACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCEELAL*QLNLQN
Trigger: ATTTTGGAGGTTCAACTGGCACAGTGCCAGCTCCTC...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp ACTGAAACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACAGGAGGTGTACCAGCTTaGAGCATAACTGAAACACAC +
Preference number: 4 (lower is better)
Translates to: TETHSVSMWTADISEVRTGGVPA*SITETH
Trigger: GTGTGTTTCAGTTATGCTGCAAGCTGGTACACCTCC...TGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCACTCCCACTGCCCATaGTGGCAGAAAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHSHCP*WQKNHC
Trigger: ACAGTGATTTTTCTGCCAGCATGGGCAGTGGGAGTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCTCTAGAGCTCTCTTaGGTTCCTGCACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPLELS*VPAQLH
Trigger: ATGAAGCTGTGCAGGAACGCAAGAGAGCTCTAGAGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTGAGCAGCTGTGAGTaGTGCCAATCGTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLSSCE*CQSFFP
Trigger: AGGGAAGAACGATTGGCAGCACTCACAGCTGCTCAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTTTGAGCAGCTGTGAGTaGTGCCAATCGTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSNIIVSNTARILHIIQCLSSCE*CQSFFP
Trigger: AGGGAAGAACGATTGGCAGCACTCACAGCTGCTCAA...ACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCTGTGGCTGGGACTACTaGTTGAAGGATGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCCGWDY*LKDVFK
Trigger: CTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACA...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGTCCTGCGGCATGCTaGAGAAATATGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSPAAC*RNMAIL
Trigger: CAAGATGGCCATATTTCTGCAGCATGCCGCAGGACT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAGAGTCCTGCGGCATaGTGCAGAAATATGGCCATC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKSPAA*CRNMAI
Trigger: GATGGCCATATTTCTGCAGCATGCCGCAGGACTCTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGAAGGCGCCAAGGAAGTaGTGTTTTGGAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLKAPRK*CFGKEQ
Trigger: CTGCTCTTTTCCAAAACAGCACTTCCTTGGCGCCTT...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp CTGAATCCAGTCAATCAATGCTTTGAAATCTCTTACATAGTTATCCAGCATCATGGACTTGGAATCACATaGCGTCCCGGAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: LNPVNQCFEISYIVIQHHGLGIT*RPGDIF
Trigger: GAAGATGTCTCCGGGACGCCATGTGATTCCAAGTCC...ATGATGCTGGATAACTATGTAAGAGATTTCAAAGCATTGATTGACTGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCCCACTGCCCATGCTaGCAGAAAAATCACTGTCGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSHCPC*QKNHCR
Trigger: ACGACAGTGATTTTTCTGCCAGCATGGGCAGTGGGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTGAATTCCATGCCCTaGAGGTCTAGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVNSMP*RSSRFF
Trigger: GAAGAACCTGCTAGACCTCCAGGGCATGGAATTCAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp AGAAGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAAGTGAATTCCATGCCCTaGAGGTCTAGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSSNIIVSNTARILHIIQVNSMP*RSSRFF
Trigger: GAAGAACCTGCTAGACCTCCAGGGCATGGAATTCAC...TTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTGGCAGTTTCCATCTaGTCGATTGGCAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLAVSI*SIGNQA
Trigger: TGCCTGATTGCCAATCGACCAGATGGAAACTGCCAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGACTGCACGATCACCTaGTTATCTGGGTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDCTIT*LSGWLT
Trigger: TGTCAACCACCCAGATAACCAGGTGATCGTGCAGTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTTTCCGCTTGACCTaGAGTCTGTGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVFRLT*SLCQIL
Trigger: CAGGATTTGGCACAGACTCCAGGTCAAGCGGAAAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGATGTTGGTCTGCTTTaGGCATCTGTCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDVGLL*ASVFSS
Trigger: GCTAGAGAAGACAGATGCTCAAAGCAGACCAACATC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTACTTCCCATGCCAATaGTGTTGGTCTGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYFPCQ*CWSALS
Trigger: GCTCAAAGCAGACCAACATCATTGGCATGGGAAGTA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACCCAATGATGTTGGTCTaGTTTGAGCATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNPMMLV*FEHLSS
Trigger: AGAAGACAGATGCTCAAAGCAGACCAACATCATTGG...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTTCCGTTCATTTTTaGGTGAGGCCTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLSVHF*VRPSAL
Trigger: CAGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGAGGTGTACCAGCTTaGAGCATAACTGAAACACAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGGVPA*SITETH
Trigger: GTGTGTTTCAGTTATGCTGCAAGCTGGTACACCTCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTGGAGGTGTACCAGCTTaGAGCATAACTGAAACACAC +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCGGVPA*SITETH
Trigger: GTGTGTTTCAGTTATGCTGCAAGCTGGTACACCTCC...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGAAGAAACACTCCCACTaGCCATGCTGGCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLKKHSH*PCWQKN
Trigger: ATTTTTCTGCCAGCATGGGCAGTGGGAGTGTTTCTT...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTGCATGTCGCCCACTaGTTAGCTCAGCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLHVAH*LAQQLF
Trigger: AAAAAGCTGCTGAGCTAAGCAGTGGGCGACATGCAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTGTGGCTGGGACTACTaGTTGAAGGATGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRCGWDY*LKDVFK
Trigger: CTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAGGGACAAGCCCTCTaGCCCTACAATAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKGQAL*PYNRLK
Trigger: TTTCAGTCTATTGTAGGGGCAGAGGGCTTGTCCCTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTATCACATAAACCCATaGAGTATGACTCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYHINP*SMTPPT
Trigger: GGTCGGGGGAGTCATACTCCATGGGTTTATGTGATA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATTGGTGGGCAAGACTaGGCGGGTGTTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIGGQD*AGVISE
Trigger: TTCAGAAATAACACCCGCCCAGTCTTGCCCACCAAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCGTTCACATTTGTGGCTaGGACTACTGCTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCVHICG*DYCLKD
Trigger: ATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAAC...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCCTGTGTTCACATTTGTaGCTGGGACTACTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCLCSHL*LGLLLE
Trigger: TTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTCCATCTGGTCGATTaGCAATCAGGCAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFHLVD*QSGSPK
Trigger: TTTTGGGCTGCCTGATTGCCAATCGACCAGATGGAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTATTTTTGGGGTAGCTaGCTGGCAGTTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYFWGS*LAVSIW
Trigger: CCAGATGGAAACTGCCAGCCAGCTACCCCAAAAATA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTGTGTTGGTATTTTTaGGGTAGCTGGCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLCWYF*GSWLAV
Trigger: AACTGCCAGCCAGCTACCCCAAAAATACCAACACAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACAAGGAAGTGCTGTTTTaGAAAAGAGCAGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNKEVLF*KRAATE
Trigger: CTCTGTTGCTGCTCTTTTCCAAAACAGCACTTCCTT...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCATTCGACCACACTCTaGTCTGATTCGCAAGTTACA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHSTTL*SDSQVT
Trigger: TGTAACTTGCGAATCAGATCAGAGTGTGGTCGAATG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGTTTTTCATGCATGTaGATTCCATGCCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSFSCM*IPCPGG
Trigger: ACCTCCAGGGCATGGAATTCACATGCATGAAAAACT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATCATCCTGCGTCGTTaGTCTAGCAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIILRR*SSNSSF
Trigger: GAAGGAAGAATTGCTAGATCAACGACGCAGGATGAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCTTTATTGTTTGCCCATaGGCCACTGTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCFIVCP*ATVLNL
Trigger: CAAGTTCAAGACAGTGGCTCATGGGCAAACAATAAA...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCCTTACTTTGTCATaGCTATTGGAGCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLLTLS*LLERWN
Trigger: ATTCCAGCGCTCCAATAGTCATGACAAAGTAAGGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp AGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTCTCCTTACTTTGTCATaGCTATTGGAGCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSNIIVSNTARILHIIQCLLTLS*LLERWN
Trigger: ATTCCAGCGCTCCAATAGTCATGACAAAGTAAGGAG...ACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTGCCAAATCCTGAATaGAAGTGGCCAGTAAAACAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVPNPE*KWPVKH
Trigger: GTGTTTTACTGGCCACTTTCATTCAGGATTTGGCAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAGAAACACTCCCACTaGCCATGCTGGCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKKHSH*PCWQKN
Trigger: ATTTTTCTGCCAGCATGGGCAGTGGGAGTGTTTCTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACGAGCTTCATAATCTaGAAGGACATCGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTSFII*KDIVPV
Trigger: GACTGGAACGATGTCCTTGCAGATTATGAAGCTCGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp TCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTACGAGCTTCATAATCTaGAAGGACATCGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SNIIVSNTARILHIIQCTTSFII*KDIVPV
Trigger: GACTGGAACGATGTCCTTGCAGATTATGAAGCTCGT...AGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCTTCATCACGTGCTTaGTTTTCTTCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRASSRA*FSSCLL
Trigger: GAGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCACAGCTTCATCACGTaGTTGCTTTTCTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHSFIT*LLFFLS
Trigger: AGACAGGAAGAAAAGCAAGCACGTGATGAAGCTGTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTCTCTCTCACGGCTTaGTGGTGTTTTCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFSLTA*WCFLPL
Trigger: TAAAGGGAGAAAACACCAGCAAGCCGTGAGAGAGAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTGTTGTAAACATTGATTaGATTGCAGAGAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: DLGGILKTVFTFVAGTTAVVNID*IAERLR
Trigger: CCTAAGTCTCTCTGCAATGCAATCAATGTTTACAAC...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGGCAGATGAAGAGCTaGAAAGCTGTTGAAGAAACG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRRQMKS*KAVEET
Trigger: CGTTTCTTCAACAGCTTTGCAGCTCTTCATCTGCCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTCTGTTGATGGATTCTTaGACTATTTTCCATATGTGG +
Preference number: 4 (lower is better)
Translates to: DLGGILKTVFTFVAGTTALLMDS*TIFHMW
Trigger: CCACATATGGAAAATAGTGCAAGAATCCATCAACAG...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTCTCACGGCTTGCTaGTGTTTTCTCCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSLTAC*CFLPLT
Trigger: TGTTAAAGGGAGAAAACACCAGCAAGCCGTGAGAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTCACATTTGTGGCTaGGACTACTGCTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVHICG*DYCLKD
Trigger: ATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTGTGTTCACATTTGTaGCTGGGACTACTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLCSHL*LGLLLE
Trigger: TTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGCCCTGTGGGATCCTaGCGATTATTGTCAAATATG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSPVGS*RLLSNM
Trigger: CATATTTGACAATAATCGCCAGGATCCCACAGGGCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTTGTCATGACTATTaGAGCGCTGGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLCHDY*SAGMKP
Trigger: TGGCTTCATTCCAGCGCTCCAATAGTCATGACAAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGATCACCTGGTTATCTaGGTGGTTGACAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDHLVI*VVDSEV
Trigger: TACTTCACTGTCAACCACCCAGATAACCAGGTGATC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAAGGCATTTCCCTTTaGGTTGGTAAGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQGISL*VGKAGF
Trigger: AAAACCAGCCTTACCAACCCAAAGGGAAATGCCTTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGACCACACTCTGATCTaGTTCGCAAGTTACATAGAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDHTLI*FASYID
Trigger: ATCTATGTAACTTGCGAATCAGATCAGAGTGTGGTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp ACTGAAACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACACCATCTCCAACAAATTaGCCTTTCTGTATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TETHSVSMWTADISEVRTPSPTN*PFCMLS
Trigger: TGAAAGCATACAGAAAGGTCAATTTGTTGGAGATGG...TGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTATTGTTTGCCCATaGGCCACTGTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFIVCP*ATVLNL
Trigger: CAAGTTCAAGACAGTGGCTCATGGGCAAACAATAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATCACTGCAGTTTTCTaGACAGTTATTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRITAVF*TVIAGE
Trigger: CTCACCTGCAATAACTGTTCAGAAAACTGCAGTGAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTCAAATATGCTGTATaGCCTTCCAGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVKYAV*PSSDSK
Trigger: TTTGCTGTCACTGGAAGGTCATACAGCATATTTGAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGAGCTGCAAAGCTGTTaGAGAAACGTAAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRELQSC*RNVNSE
Trigger: TTCAGAGTTTACGTTTCTTCAACAGCTTTGCAGCTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACAAGCAGCGATAAGTaGAGGGAACAGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTSSDK*REQYFD
Trigger: ATCAAAGTACTGTTCCCTTCACTTATCGCTGCTTGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTCTTGCTCCAGAATaGTCTTGTTCTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSLAPE*SCSDGC
Trigger: ACAACCATCAGAACAAGATCATTCTGGAGCAAGAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCAATTTTCCGAGGGTaGCTTGTTTTAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSIFRG*LVLVGL
Trigger: AAGTCCCACTAAAACAAGGCACCCTCGGAAAATTGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCAATGATGTTGGTCTaGTTTGAGCATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPMMLV*FEHLSS
Trigger: AGAAGACAGATGCTCAAAGCAGACCAACATCATTGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTCACAGCTTCATCACGTaGTTGCTTTTCTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: NTLCINVDSRYFRSSNIIHSFIT*LLFFLS
Trigger: AGACAGGAAGAAAAGCAAGCACGTGATGAAGCTGTG...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTGTACGACCCTCCTCTaGAACTATTCTCCTTACTTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRCTTLL*NYSPYF
Trigger: AAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTTGTACGACCCTCCTCTaGAACTATTCTCCTTACTTT +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCCTTLL*NYSPYF
Trigger: AAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACA...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTGACCTGGAGTCTGTaGCAAATCCTGAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLTWSL*QILNES
Trigger: ACTTTCATTCAGGATTTGGCACAGACTCCAGGTCAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AAAGTGTTTATCTCCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTTATTTTACAGTCCACTaGAGTACTACGCTATTGCTG +
Preference number: 4 (lower is better)
Translates to: KVFISSRRRCYFTVHCSTYFTVH*STTLLL
Trigger: CAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATA...AGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGGAGATAAACACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCTGCCTGGTGGATATATaGATTGCTTTCCATACAGTA +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCCLVDI*IAFHTV
Trigger: TACTGTATGGAAAGCAATGCATATATCCACCAGGCA...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTTCGGCAAGAGGATaGTCACAAGAGTGTAATGAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFSARG*SQECNE
Trigger: CTCATTACACTCTTGTGACCATCCTCTTGCCGAAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp AGAAGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATTTTCGGCAAGAGGATaGTCACAAGAGTGTAATGAG +
Preference number: 4 (lower is better)
Translates to: RSSNIIVSNTARILHIIQFSARG*SQECNE
Trigger: CTCATTACACTCTTGTGACCATCCTCTTGCCGAAAA...TTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAATGGCTTCTTCATTaGCCTTTTCTAGACGATCTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQWLLH*PFLDDL
Trigger: CAGATCGTCTAGAAAAGGCCAATGAAGAAGCCATTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp TTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTGCAGCATAACTGAAACACAATGGCTTCTTCATTaGCCTTTTCTAGACGATCTG +
Preference number: 4 (lower is better)
Translates to: FSSFTCKGGVPACSITETQWLLH*PFLDDL
Trigger: CAGATCGTCTAGAAAAGGCCAATGAAGAAGCCATTG...TGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCATCGTTCCAGTCCATaGACATACCACAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHRSSP*TYHRKK
Trigger: TTTCTTTCTGTGGTATGTCCATGGACTGGAACGATG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCATAAGGGGTCAGTTTaGGGGCATAATCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHKGSV*GHNQYL
Trigger: CAAATACTGATTATGCCCCCAAACTGACCCCTTATG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTCAAAGCTTCTGCTaGAGCTGTACTTTCAACCAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFQSFC*SCTFNH
Trigger: GTGGTTGAAAGTACAGCTCCAGCAGAAGCTTTGAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCATGCTGCAGAAATATaGCCATCTTGGGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHAAEI*PSWDSH
Trigger: ATGAGAATCCCAAGATGGCCATATTTCTGCAGCATG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTACTTTGATCAGCCGTaGGTCACTGAAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYFDQP*VTEILE
Trigger: TTCCAGTATTTCAGTGACCCACGGCTGATCAAAGTA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp AAAGTGTTTATCTCCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTTTATGGAAAGAAGTATaGCGATTCCTCAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVFISSRRRCYFTVHCSTLWKEV*RFLKEL
Trigger: CAGCTCTTTGAGGAATCGCCATACTTCTTTCCATAA...AGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGGAGATAAACACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
3UTR CAA 72 bp CATTTGATGTTACATTTATTCTATCTGTTGATGGACTaGGAATCACATGGCGTCCCGGAGACATCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HLMLHLFYLLMD*ESHGVPETSSL
Trigger: TAAAGAAGATGTCTCCGGGACGCCATGTGATTCCAAGTCCATCAACAGATAGAATAAATGTAACATCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCATCTCCAACAAATTaGCCTTTCTGTATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPSPTN*PFCMLS
Trigger: TGAAAGCATACAGAAAGGTCAATTTGTTGGAGATGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATTGGAGCGCTGGAATaGAGCCATCATTCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIGALE*SHHSLN
Trigger: ATTTAAAGAATGATGGCTTCATTCCAGCGCTCCAAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTATTGGAGCGCTGGAATaGAGCCATCATTCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCIGALE*SHHSLN
Trigger: ATTTAAAGAATGATGGCTTCATTCCAGCGCTCCAAT...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGAAAATACTCTAGGGTaGTTCACTAGGACACATCTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRENTLG*FTRTHL
Trigger: AAGATGTGTCCTAGTGAATCACCCTAGAGTATTTTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTCTTCCATCATCCTaGGTCGTTGATCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFLPSS*VVDLAI
Trigger: AATTGCTAGATCAACGACGCAGGATGATGGAAGAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTCTTCAAGGAAAGATaGTCCACTTCTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFFKER*STSSSD
Trigger: GTCAGATGAAGAAGTGGAGCATCTTTCCTTGAAGAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATCTTTCAAAGCTTCTaGTGGAGCTGTACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIFQSF*WSCTFN
Trigger: GTTGAAAGTACAGCTCCAGCAGAAGCTTTGAAAGAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTGCAGTACTACGCTATTaGTGGGAGTGTAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCAVLRY*WECKLV
Trigger: AACTAATTTACACTCCCAGCAATAGCGTAGTACTGC...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCGTTTTAGAAGATCTTTaGCTAATCGCTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCVLEDL*LIAEAL
Trigger: CAAAGCTTCAGCGATTAGCCAAAGATCTTCTAAAAC...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CCA 90 bp TCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTTTAGTTCGGCCATTATaGAAAGAAGTATGGCGATTC +
Preference number: 4 (lower is better)
Translates to: SNIIVSNTARILHIIQCTLVRPL*KEVWRF
Trigger: GAATCGCCATACTTCTTTCCATAATGGCCGAACTAA...AGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp CTGAATCCAGTCAATCAATGCTTTGAAATCTCTTACATAGTTATCCAGCATCATGTACTACGCTATTGCTaGGAGTGTAAATTAGTTCGG +
Preference number: 4 (lower is better)
Translates to: LNPVNQCFEISYIVIQHHVLRYC*ECKLVR
Trigger: CCGAACTAATTTACACTCCCAGCAATAGCGTAGTAC...ATGATGCTGGATAACTATGTAAGAGATTTCAAAGCATTGATTGACTGGATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CCA 90 bp TTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACGTTTACTACACAAAATaGCTAATTCGAAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: LSRILPEFFTSSNVLTVNVYYTK*LIRSHL
Trigger: CAAGTGACTTCGAATTAGCCATTTTGTGTAGTAAAC...GTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGATTTTCCACCAGTTTaGCATTTAGGTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRDFPPV*HLGFPS
Trigger: TGATGGAAAACCTAAATGTCAAACTGGTGGAAAATC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCTTCGTCGAGCATTTaGTGTTACATTTATTCTATC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRASSSI*CYIYSI
Trigger: GATAGAATAAATGTAACATCAAATGCTCGACGAAGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTTTTACGAGAGGGTaGAGAAAGTTTTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSFTRG*RKFFMH
Trigger: ATGCATGAAAAACTTTCTTCACCCTCTCGTAAAAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCGCTTAAACTCAGCATaGAGTAATTTTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRRLNSA*SNFSSI
Trigger: GATGGAAGAAAAATTACTTCATGCTGAGTTTAAGCG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAAAAGATATACCTCTaGAGAGATCAGGACATTGCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKKIYL*RDQDIA
Trigger: TGCAATGTCCTGATCTCTTCAGAGGTATATCTTTTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGAATTGTCTCGAATACTaGCAGAATTCTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: HNCLEYCQNSSHHPMYSLNCLEY*QNSSHH
Trigger: ATGATGTGAAGAATTCTGGCAGTATTCGAGACAATT...CAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATG
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACAATTGCTTGTAACTaGACTTCTCGCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTIACN*TSRLNS
Trigger: TGAGTTTAAGCGAGAAGTGCAGTTACAAGCAATTGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp AGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACAATTGCTTGTAACTaGACTTCTCGCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: SSNIIVSNTARILHIIQCTIACN*TSRLNS
Trigger: TGAGTTTAAGCGAGAAGTGCAGTTACAAGCAATTGT...ACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCAATCTGTTCCATGTaGCTTCGAATACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSICSM*LRILSS
Trigger: TGATGAAAGTATTCGAAGGCACATGGAACAGATTGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAATGCAATCTGATCTaGCACATTCTCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKCNLI*HILFFQ
Trigger: CTGGAAAAAGAGAATGTGGCAGATCAGATTGCATTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTGTAAACATTGATTaGATTGCAGAGAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVVNID*IAERLR
Trigger: CCTAAGTCTCTCTGCAATGCAATCAATGTTTACAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGTTTTAGAAGATCTTTaGCTAATCGCTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRVLEDL*LIAEAL
Trigger: CAAAGCTTCAGCGATTAGCCAAAGATCTTCTAAAAC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAACGTAAACTCTGAATaGCCACTTGGATGGTATTTT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRNVNSE*PLGWYF
Trigger: AAAATACCATCCAAGTGGCCATTCAGAGTTTACGTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAAGGACTTCTGCCATaGAATTTGAAATATCTGAAG +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQGLLP*NLKYLK
Trigger: CTTCAGATATTTCAAATTCCATGGCAGAAGTCCTTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR TCA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTCGCTTAAACTCAGCATaGAGTAATTTTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: NTLCINVDSRYFRSSNIIRLNSA*SNFSSI
Trigger: GATGGAAGAAAAATTACTTCATGCTGAGTTTAAGCG...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTATTTTACAGTCCACTaGAGTACTCTGTTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYFTVH*STLFSS
Trigger: ACTACTAAACAGAGTACTGCAGTGGACTGTAAAATA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATAGATTTCATCTACTaGTCGGCGAAGATTATCAAA +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIDFIY*SAKIIK
Trigger: TTTGATAATCTTCGCCGAGCAGTAGATGAAATCTAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATTGACCTTTCTGTATaGTTTCATCAGGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRIDLSV*FHQVKD
Trigger: GTCTTTTACCTGATGAAAGCATACAGAAAGGTCAAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTATTGACCTTTCTGTATaGTTTCATCAGGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCIDLSV*FHQVKD
Trigger: GTCTTTTACCTGATGAAAGCATACAGAAAGGTCAAT...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAATTGTCTCGAATACTaGCAGAATTCTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRNCLEY*QNSSHH
Trigger: ATGATGTGAAGAATTCTGGCAGTATTCGAGACAATT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTTTATTTCAGCGTTaGTTCATTTCACAACCATGT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLLFQR*FISQPC
Trigger: ACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CCA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAGAGCCAGAATTTTTaGTTTCCATTAAACTCTCAT +
Preference number: 4 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQSQNF*FPLNSH
Trigger: ATGAGAGTTTAATGGAAACCAAAAATTCTGGCTCTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR GCA 90 bp CTGAATCCAGTCAATCAATGCTTTGAAATCTCTTACATAGTTATCCAGCATCATAATTGTCTCGAATACTaGCAGAATTCTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: LNPVNQCFEISYIVIQHHNCLEY*QNSSHH
Trigger: ATGATGTGAAGAATTCTGGCAGTATTCGAGACAATT...ATGATGCTGGATAACTATGTAAGAGATTTCAAAGCATTGATTGACTGGATTCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS GCA 90 bp CTCCAGGCCTCAGCGCACGCATCTGGAAGACGGAGAGGCCATTCCTaGCCCGTTTCCTGGGCAGAGCCCCGACCGCCCTGCTTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: LQASAHASGRRRGHS*PVSWAEPRPPCLVR
Trigger: CCGAACTAAGCAGGGCGGTCGGGGCTCTGCCCAGGAAACGGGGCAGGAATGGCCTCTCCGTCTTCCAGATGCGTGCGCTGAGGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563919.1
ENST00000565507.5
CDS CCA 90 bp AGGTGCGAGAGGCTCTTCGCCCCTCCAGGCCTCAGCGCACGCATCTaGAAGACGGAGAGGCCATTCCTGCCCCGTTTCCTGGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RCERLFAPPGLSARI*KTERPFLPRFLGRA
Trigger: GGCTCTGCCCAGGAAACGGGGCAGGAATGGCCTCTCCGTCTTCCAGATGCGTGCGCTGAGGCCTGGAGGGGCGAAGAGCCTCTCGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563919.1
ENST00000565507.5
CDS GCA 90 bp AGCCGTGGGTCACTGAAATACTGGAAGGGCAACTGGCAGAGCTTCTaGAGCACTGTGGGGTGGCGGCCGGACTGCACGATCACCTGGTTA +
Preference number: 5 (lower is better)
Translates to: SRGSLKYWKGNWQSF*STVGWRPDCTITWL
Trigger: TAACCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS GCA 90 bp CTGGCAGCCCCTAGGTGGCTTCAGGATGGAAGCTGGTCACATTTTTaGGTGAGGCCTTCTGCACTGTCATTGGTGGGCAAGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LAAPRWLQDGSWSHF*VRPSALSLVGKTGR
Trigger: CCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCAGCTTCCATCCTGAAGCCACCTAGGGGCTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS GCA 90 bp AGCCGTGGGTCACTGAAATACTGGAAGGGCAACTGGCAGAGCTTCTaGAGCACTGTGGGGTGGCGGCCGGACTGCACGATCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SRGSLKYWKGNWQSF*STVGWRPDCTITRK
Trigger: CTTTCTTGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563246.1
CDS CCA 90 bp AGTACTTTGATCAGCCGTGGGTCACTGAAATACTGGAAGGGCAACTaGCAGAGCTTCTGCAGCACTGTGGGGTGGCGGCCGGACTGCACG +
Preference number: 5 (lower is better)
Translates to: STLISRGSLKYWKGN*QSFCSTVGWRPDCT
Trigger: CGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCTGATCAAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS TCA 90 bp CAGCCCCTAGGTGGCTTCAGGATGGAAGCTGGTCACATTTTTGCGTaGGGCCTTCTGCACTGTCATTGGTGGGCAAGACTGGGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: QPLGGFRMEAGHIFA*GLLHCHWWARLGGC
Trigger: ACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCAGCTTCCATCCTGAAGCCACCTAGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS CCA 90 bp AAATACTGGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTGGGGTaGCGGCCGGACTGCACGATCACCTGGTTATCTGGGTGGTTGACA +
Preference number: 5 (lower is better)
Translates to: KYWKGNWQSFCSTVG*RPDCTITWLSGWLT
Trigger: TGTCAACCACCCAGATAACCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS TCA 90 bp ACTGACACCTGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCAGTTaGACCTCTATGACTGGCCTTGAGGCTCTAAGAAAGGAGGAACTG +
Preference number: 5 (lower is better)
Translates to: TDTCGSQTRSWHCAS*TSMTGLEALRKEEL
Trigger: CAGTTCCTCCTTTCTTAGAGCCTCAAGGCCAGTCATAGAGGTTCAACTGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACAGGTGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567618.5
CDS CCA 90 bp AGTGAAGGGAACAGTACTTTGATCAGCCGTGGGTCACTGAAATACTaGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTGGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: SEGNSTLISRGSLKY*KGNWQSFCSTVGWR
Trigger: CCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCTGATCAAAGTACTGTTCCCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS CCA 90 bp CAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTGCAATCATGGTaGAAGGAGAAGGGCAAGCAAGGCGCCTTCTTTACAAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QFSMAGEASGNLQSW*KEKGKQGAFFTRQQ
Trigger: CTGCTGCCTTGTAAAGAAGGCGCCTTGCTTGCCCTTCTCCTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS GCA 90 bp TTAGGCTTAAAGGCACTAGGGAGCAGGTCTGGTGAAGTTCAGTGGTaGGCCTTTGTGAGTGAGCCTGCACAGGCCACAAGTTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: LGLKALGSRSGEVQW*AFVSEPAQATSSQE
Trigger: CTCCTGTGAACTTGTGGCCTGTGCAGGCTCACTCACAAAGGCGCACCACTGAACTTCACCAGACCTGCTCCCTAGTGCCTTTAAGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 90 bp CCTTTAGGCTTAAAGGCACTAGGGAGCAGGTCTGGTGAAGTTCAGTaGTGCGCCTTTGTGAGTGAGCCTGCACAGGCCACAAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: PLGLKALGSRSGEVQ*CAFVSEPAQATSSQ
Trigger: CTGTGAACTTGTGGCCTGTGCAGGCTCACTCACAAAGGCGCACCACTGAACTTCACCAGACCTGCTCCCTAGTGCCTTTAAGCCTAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS-3UTR CAA 90 bp GCGCCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACCCCCAGGATGTATTTaGGCGCCAAGACTCACGAGC +
Preference number: 5 (lower is better)
Translates to: APRLTSFIICKDIVPVHGPPGCI*APRLTS
Trigger: GCTCGTGAGTCTTGGCGCCAAAATACATCCTGGGGG...TCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp CCAAGACTCACGAGCTTCATAATCTGCAAGGACATCGTTCCAGTCCATGGACATCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: PRLTSFIICKDIVPVHGHPSALS*VGKTGR
Trigger: CCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGG...ATGTCCATGGACTGGAACGATGTCCTTGCAGATTATGAAGCTCGTGAGTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS GCA 90 bp GAGTGTAATTCTCCTTGGGACTGGCAGTGCTGGGGTCCAAGATGGTaGCATGGAAGAGGACACAGTAGAGCATATGAAGAACTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ECNSPWDWQCWGPRW*HGRGHSRAYEELQP
Trigger: TGGCTGGAGTTCTTCATATGCTCTACTGTGTCCTCTTCCATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS GCA 90 bp GTGGCTTCAGGATGGAAGCTGGTCACATTTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAAGACTGGGCGGGTGTTATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VASGWKLVTFLREAF*TVIGGQDWAGVISE
Trigger: TTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCAGCTTCCATCCTGAAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS CCA 90 bp GTGTACACATTGCATGTAAGAGTCCTGCGGCATGCTGCAGAAATATaGCCATCTTGGGATTCTCATCCACTGGGCCTTGCACCGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VYTLHVRVLRHAAEI*PSWDSHPLGLAPRG
Trigger: TCCTCTCGGTGCAAGGCCCAGTGGATGAGAATCCCAAGATGGCCATATTTCTGCAGCATGCCGCAGGACTCTTACATGCAATGTGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS-3UTR CAA 90 bp CTGTGTTCACATTTGTGGCTGGGACTACTGCTTGAAGGATGTGTTCAAGGGCTGGGCTGGGACTACTGCTaGAAGGATGTGTTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LCSHLWLGLLLEGCVQGLGWDYC*KDVFKG
Trigger: GCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCC...CAGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS CCA 90 bp GAATGGCCACTTGGATGGTATTTTGAGTGTAATTCTCCTTGGGACTaGCAGTGCTGGGGTCCAAGATGGTGCCATGGAAGAGGACACAGT +
Preference number: 5 (lower is better)
Translates to: EWPLGWYFECNSPWD*QCWGPRWCHGRGHS
Trigger: ACTGTGTCCTCTTCCATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTCAAAATACCATCCAAGTGGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 90 bp TTCAAGGAAAGATGCTCCACTTCTTCATCTGACAGTTCACGCCCCTaGATGCTGGTATTCTCTCTCACGGCTTGCTGGTGTTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: FKERCSTSSSDSSRP*MLVFSLTACWCFLP
Trigger: AGGGAGAAAACACCAGCAAGCCGTGAGAGAGAATACCAGCATCCAGGGGCGTGAACTGTCAGATGAAGAAGTGGAGCATCTTTCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 90 bp TTTGAGTGTAATTCTCCTTGGGACTGGCAGTGCTGGGGTCCAAGATaGTGCCATGGAAGAGGACACAGTAGAGCATATGAAGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: FECNSPWDWQCWGPR*CHGRGHSRAYEELQ
Trigger: CTGGAGTTCTTCATATGCTCTACTGTGTCCTCTTCCATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 90 bp AACTCTGAATGGCCACTTGGATGGTATTTTGAGTGTAATTCTCCTTaGGACTGGCAGTGCTGGGGTCCAAGATGGTGCCATGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: NSEWPLGWYFECNSP*DWQCWGPRWCHGRG
Trigger: TCCTCTTCCATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTCAAAATACCATCCAAGTGGCCATTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS TCA 90 bp TTACTACACAAAATGGCTAATTCGAAGTCACTTGCCATTTTTGCGTaGGGCCTTCTGCACTGTCATTGGTGGGCAAGACTGGGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: LLHKMANSKSLAIFA*GLLHCHWWARLGGC
Trigger: ACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACTTCGAATTAGCCATTTTGTGTAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS GCA 90 bp GGCTGTGACTGGGTCAGGGCAGAACTGAACTTGCAGACTAATTCTTaGTCAGACAAATGGTACCGACAAGGATGTGGACTTGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: GCDWVRAELNLQTNS*SDKWYRQGCGLEFL
Trigger: CAGAAATTCAAGTCCACATCCTTGTCGGTACCATTTGTCTGAGCAAGAATTAGTCTGCAAGTTCAGTTCTGCCCTGACCCAGTCACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS GCA 90 bp AAATGGCTAATTCGAAGTCACTTGCCATTTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAAGACTGGGCGGGTGTTATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: KWLIRSHLPFLREAF*TVIGGQDWAGVISE
Trigger: TTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACTTCGAATTAGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS CCA 90 bp AGATTTTCCACCAGTTTGACATTTAGGTTTTCAGTTCAGCATGGCTaGGGAGGCCTCAGGAAACTTGCAATCATGGTGGAAGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RFSTSLTFRFSVQHG*GGLRKLAIMVEGEG
Trigger: CCCTTCTCCTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGAAAACCTAAATGTCAAACTGGTGGAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS-3UTR CAA 90 bp CTGTGTTCACATTTGTGGCTGGGACTACTGCTTGAAGGATGTGTTCAAGGGCTGAAAGCAGACACTTTATaGTTTGCCCATGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: LCSHLWLGLLLEGCVQGLKADTL*FAHEPL
Trigger: CAGTGGCTCATGGGCAAACAATAAAGTGTCTGCTTT...CAGCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCCACAAATGTGAACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCATCCACTGGGCCTaGCACCGAGAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLIHWA*HREEAG
Trigger: GCCTGCTTCCTCTCGGTGCAAGGCCCAGTGGATGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS CCA 90 bp CATTGCAGAGAGAACACTGCTTCTTTCTTTCATAAGGGGTCAGTTTaGGGGCATAATCAGTATTTGCATGTCGCCCACTGCTTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HCRENTASFFHKGSV*GHNQYLHVAHCLAQ
Trigger: CTGAGCTAAGCAGTGGGCGACATGCAAATACTGATTATGCCCCCAAACTGACCCCTTATGAAAGAAAGAAGCAGTGTTCTCTCTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPSALS*VGKTGR
Trigger: CCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp TCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: SNIIVSNTARILHIIQCTPSALS*VGKTGR
Trigger: CCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGG...AGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCCAGCCAGGTCGGTaGCCTGAAGAGCAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLQPGR*PEEQLS
Trigger: TGACAGCTGCTCTTCAGGCAACCGACCTGGCTGGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS GCA 90 bp CTCTCATTTATATGTGGCTGTAACCTCCCAGAACTCTACGTATTGTaGAGTCAGTTACCTCCTAAGGCTAGTTCAACTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: LSFICGCNLPELYVL*SQLPPKASSTALET
Trigger: TGTCTCCAGAGCAGTTGAACTAGCCTTAGGAGGTAACTGACTGCACAATACGTAGAGTTCTGGGAGGTTACAGCCACATATAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS-3UTR CAA 90 bp CCAGTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTACGCTATTGCTGGGCAATGGCTTCTTCATaGGCCTTTTCTAGACGATCT +
Preference number: 5 (lower is better)
Translates to: PVVDDVILQSTAVLRYCWAMASS*AFSRRS
Trigger: AGATCGTCTAGAAAAGGCCAATGAAGAAGCCATTGC...CCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCCCCAGGATGTATTTaGGCGCCAAGACTCACGAGC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPPGCI*APRLTS
Trigger: GCTCGTGAGTCTTGGCGCCAAAATACATCCTGGGGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGGCCTCTAGAGCTCTCTaGCGTTCCTGCACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLASRAL*RSCTAS
Trigger: TGAAGCTGTGCAGGAACGCAAGAGAGCTCTAGAGGC...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp TCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTGAACTGGTCTTTCCGTTCATTTTaGCGTGAGGCCTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: SRILPEFFTSSNVLTVNWSFRSF*REAFCT
Trigger: AGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAGA...CCAGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCCTCTAGAGCTCTCTaGCGTTCCTGCACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRASRAL*RSCTAS
Trigger: TGAAGCTGTGCAGGAACGCAAGAGAGCTCTAGAGGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGCTGGGACTACTGCTaGAAGGATGTGTTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGWDYC*KDVFKG
Trigger: GCCCTTGAACACATCCTTCAAGCAGTAGTCCCAGCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGGCTGGTTTTCCGCTaGACCTGGAGTCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRRLVFR*TWSLCQ
Trigger: TTGGCACAGACTCCAGGTCAAGCGGAAAACCAGCCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS TCA 90 bp CAGAATGATCTTGTTCTGATGGTTGTTGTAACAAGCAGCGATAAGTaGAGGGAACAGTACTTTGATCAGCCGTGGGTCACTGAAATACTG +
Preference number: 5 (lower is better)
Translates to: QNDLVLMVVVTSSDK*REQYFDQPWVTEIL
Trigger: CAGTATTTCAGTGACCCACGGCTGATCAAAGTACTGTTCCCTTCACTTATCGCTGCTTGTTACAACAACCATCAGAACAAGATCATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS CCA 90 bp ACGTATTGTGCAGTCAGTTACCTCCTAAGGCTAGTTCAACTGCTCTaGAGACAGAAAAGCATTAACCCAAAGGAAGGGATTTCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: TYCAVSYLLRLVQLL*RQKSINPKEGISVL
Trigger: AAGAACAGAAATCCCTTCCTTTGGGTTAATGCTTTTCTGTCTCCAGAGCAGTTGAACTAGCCTTAGGAGGTAACTGACTGCACAATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS-3UTR CAA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTCAGACACTTTATTGTTaGCCCATGAGCCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: DLGGILKTVFTFVAGTTAQTLYC*PMSHCL
Trigger: AAGACAGTGGCTCATGGGCAAACAATAAAGTGTCTG...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGAAGGGAACAGTACTTaGATCAGCCGTGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSREGNST*ISRGSL
Trigger: CAGTGACCCACGGCTGATCAAAGTACTGTTCCCTTC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp CATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGAGTCACTTGCCATTTTaGCGTGAGGCCTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: HNCLEYCQNSSHHPMYSLSHLPF*REAFCT
Trigger: AGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACT...CAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS TCA 90 bp TTCCATAATCTGTTAACAAAAGAAATCACTCCCTTTCGACGCAGCTaGTGGGTAGACTGGTGGACTCCATATCCTGAGCATGTAAAGTTA +
Preference number: 5 (lower is better)
Translates to: FHNLLTKEITPFRRS*WVDWWTPYPEHVKL
Trigger: TAACTTTACATGCTCAGGATATGGAGTCCACCAGTCTACCCATCAGCTGCGTCGAAAGGGAGTGATTTCTTTTGTTAACAGATTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS GCA 90 bp GTCGTAGACGATGTTATTTTACAGTCCACTGCAGTACTACGCTATTaGTGGGAGTGTAAATTAGTTCGGCCATTATGGAAAGAAGTATGG +
Preference number: 5 (lower is better)
Translates to: VVDDVILQSTAVLRY*WECKLVRPLWKEVW
Trigger: CCATACTTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS CCA 90 bp GTAGACGATGTTATTTTACAGTCCACTGCAGTACTACGCTATTGCTaGGAGTGTAAATTAGTTCGGCCATTATGGAAAGAAGTATGGCGA +
Preference number: 5 (lower is better)
Translates to: VDDVILQSTAVLRYC*ECKLVRPLWKEVWR
Trigger: TCGCCATACTTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAACATCGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS CCA 90 bp GTCAGGGCAGAACTGAACTTGCAGACTAATTCTTGCTCAGACAAATaGTACCGACAAGGATGTGGACTTGAATTTCTGAAAAGTTGCATA +
Preference number: 5 (lower is better)
Translates to: VRAELNLQTNSCSDK*YRQGCGLEFLKSCI
Trigger: TATGCAACTTTTCAGAAATTCAAGTCCACATCCTTGTCGGTACCATTTGTCTGAGCAAGAATTAGTCTGCAAGTTCAGTTCTGCCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS-3UTR CAA 90 bp TATCCAGCATCATTAGCACCTCCTTACATTCGACCACACTCTGATCTGATTCGCAGATTTTCCACCAGTTaGACATTTAGGTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: YPASLAPPYIRPHSDLIRRFSTS*TFRFSI
Trigger: GATGGAAAACCTAAATGTCAAACTGGTGGAAAATCT...GCGAATCAGATCAGAGTGTGGTCGAATGTAAGGAGGTGCTAATGATGCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCCCATGCCAATGATGTaGGTCTGCTTTGAGCATCTG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRPMPMM*VCFEHL
Trigger: CAGATGCTCAAAGCAGACCAACATCATTGGCATGGG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTATCTGTTGATGGACTaGGAATCACATGGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRYLLMD*ESHGVP
Trigger: CGGGACGCCATGTGATTCCAAGTCCATCAACAGATA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTTATCTGTTGATGGACTaGGAATCACATGGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCYLLMD*ESHGVP
Trigger: CGGGACGCCATGTGATTCCAAGTCCATCAACAGATA...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp ACTGAAACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACACTGGCACTGTGCCAGTaGAACCTCCAAAATTTAAGC +
Preference number: 5 (lower is better)
Translates to: TETHSVSMWTADISEVRTLALCQ*NLQNLS
Trigger: GCTTAAATTTTGGAGGTTCAACTGGCACAGTGCCAG...TGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTCTTCCATAGCTTCTaGTTGAGCAGCTGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLFHSF*LSSCEC
Trigger: GCACTCACAGCTGCTCAACAAGAAGCTATGGAAGAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp TTTTCTTCATTTACTTGTAAAGGAGGTGTACCAGCTTGCAGCATAACTGAAACACTCTTCCATAGCTTCTaGTTGAGCAGCTGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: FSSFTCKGGVPACSITETLFHSF*LSSCEC
Trigger: GCACTCACAGCTGCTCAACAAGAAGCTATGGAAGAG...TGTTTCAGTTATGCTGCAAGCTGGTACACCTCCTTTACAAGTAAATGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTTTCCATCTGGTCGATaGGCAATCAGGCAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRFPSGR*AIRQPK
Trigger: TTTGGGCTGCCTGATTGCCAATCGACCAGATGGAAA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGCACAGTGTACACATaGCATGTAAGAGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSTVYT*HVRVLR
Trigger: CCGCAGGACTCTTACATGCAATGTGTACACTGTGCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAGCTCAAGATAGTCTaGGGAACCAAGGCATTTCCC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQLKIV*GTKAFP
Trigger: GGGAAATGCCTTGGTTCCCAAGACTATCTTGAGCTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS TCA 90 bp CTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCACTGTaGACAAATGAACTGAGTAATTCCACACTGGATCCTGGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LEYCQNSSHHPMYSL*TNELSNSTLDPGGN
Trigger: ATTTCCTCCAGGATCCAGTGTGGAATTACTCAGTTCATTTGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564022.1
CDS CCA 90 bp AAAAGATTTATAAATAGCAGCATGGCAAAGGATGAACATAGGCTTTaGGGTGGGAGAGTCATGGTTACTAGTCCTGGTTCACAAACATGT +
Preference number: 5 (lower is better)
Translates to: KRFINSSMAKDEHRL*GGRVMVTSPGSQTC
Trigger: ACATGTTTGTGAACCAGGACTAGTAACCATGACTCTCCCACCCCAAAGCCTATGTTCATCCTTTGCCATGCTGCTATTTATAAATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 90 bp GCAGTACTACGCTATTGCTGGGAGTGTAAATTAGTTCGGCCATTATaGAAAGAAGTATGGCGATTCCTCAAAGAGCTGTTTAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: AVLRYCWECKLVRPL*KEVWRFLKELFSSF
Trigger: AAAACTACTAAACAGCTCTTTGAGGAATCGCCATACTTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATAGCGTAGTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTGGCACTGTGCCAGTaGAACCTCCAAAATTTAAGC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLALCQ*NLQNLS
Trigger: GCTTAAATTTTGGAGGTTCAACTGGCACAGTGCCAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp CACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTGTCTGGCACTGTGCCAGTaGAACCTCCAAAATTTAAGC +
Preference number: 5 (lower is better)
Translates to: HTLYQCGQQIFQKFEHNCLALCQ*NLQNLS
Trigger: GCTTAAATTTTGGAGGTTCAACTGGCACAGTGCCAG...ACAATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565507.5
ENST00000568549.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGTCTTTCCGTTCATTTTaGCGTGAGGCCTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSFRSF*REAFCT
Trigger: AGTGCAGAAGGCCTCACGCAAAAATGAACGGAAAGA...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp ACTGAAACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACACTTTTCTTGCCTCTGTaGTTCAATTCGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TETHSVSMWTADISEVRTLFLPL*FNSGFL
Trigger: CAAGAAGCCCGAATTGAACAACAGAGGCAAGAAAAG...TGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGGCATAATCAGTATTaGCATGTCGCCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGHNQY*HVAHCL
Trigger: TAAGCAGTGGGCGACATGCAAATACTGATTATGCCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGATTCTCTCTCACGGCTaGCTGGTGTTTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRILSHG*LVFSPF
Trigger: AAAGGGAGAAAACACCAGCAAGCCGTGAGAGAGAAT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTCTAATCGCTGAAGCTTaGCTTTATAAGGTGAATCAG +
Preference number: 5 (lower is better)
Translates to: DLGGILKTVFTFVAGTTALIAEA*LYKVNQ
Trigger: CTGATTCACCTTATAAAGCAAAGCTTCAGCGATTAG...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCAAACTGTGTTCACATTaGTGGCTGGGACTACTGCTT +
Preference number: 5 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCKLCSH*WLGLLL
Trigger: AAGCAGTAGTCCCAGCCACAAATGTGAACACAGTTT...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACCACAGCACTGACTTaGAGAAGTCCAGTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTTALT*RSPVVK
Trigger: CTTGACAACTGGACTTCTCAAAGTCAGTGCTGTGGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAGCAGGCACACAGTTaGTCAATCAGACCCATGTTC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKQAHS*SIRPMF
Trigger: GAACATGGGTCTGATTGACAAACTGTGTGCCTGCTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAGCTATTAGGTTTCTaGCTGTACGACCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKLLGF*LYDPPL
Trigger: CAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTAGGAGGAATTCTTAAAACTGTGTTCACATTTGTGGCTGGGACTACTGCTTGCCACATTCATAATTaGTATCTCCAGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: DLGGILKTVFTFVAGTTACHIHN*YLQLLM
Trigger: CATCAACAGCTGGAGATACAAATTATGAATGTGGCA...AGCAGTAGTCCCAGCCACAAATGTGAACACAGTTTTAAGAATTCCTCCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp TCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTACTCTAATTCGAAGTCACTaGCCATTTTTGCGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: SNIIVSNTARILHIIQCTLIRSH*PFLREA
Trigger: GGCCTCACGCAAAAATGGCAAGTGACTTCGAATTAG...AGTACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS CCA 90 bp TATTGCTGGGAGTGTAAATTAGTTCGGCCATTATGGAAAGAAGTATaGCGATTCCTCAAAGAGCTGTTTAGTAGTTTTATGAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: YCWECKLVRPLWKEV*RFLKELFSSFMSAL
Trigger: CAAGGCACTCATAAAACTACTAAACAGCTCTTTGAGGAATCGCCATACTTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGCAATGGCTTCTTCATaGGCCTTTTCTAGACGATCT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRAMASS*AFSRRS
Trigger: AGATCGTCTAGAAAAGGCCAATGAAGAAGCCATTGC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGCTTCATCACGTGCTaGCTTTTCTTCCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSFITC*LFFLSS
Trigger: AGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp AGTTCGAACATAATTGTCTCGAATACTGCCAGAATTCTTCACATCATCCAATGTAGCTTCATCACGTGCTaGCTTTTCTTCCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSNIIVSNTARILHIIQCSFITC*LFFLSS
Trigger: AGAAGACAGGAAGAAAAGCAAGCACGTGATGAAGCT...ACATTGGATGATGTGAAGAATTCTGGCAGTATTCGAGACAATTATGTTCGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTTTTCTTGCCTCTGTaGTTCAATTCGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLFLPL*FNSGFL
Trigger: CAAGAAGCCCGAATTGAACAACAGAGGCAAGAAAAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCAGACACTTTATTGTTaGCCCATGAGCCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRQTLYC*PMSHCL
Trigger: AAGACAGTGGCTCATGGGCAAACAATAAAGTGTCTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAAGCAGACACTTTATaGTTTGCCCATGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKADTL*FAHEPL
Trigger: CAGTGGCTCATGGGCAAACAATAAAGTGTCTGCTTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAAACTGTGTTCACATTaGTGGCTGGGACTACTGCTT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRKLCSH*WLGLLL
Trigger: AAGCAGTAGTCCCAGCCACAAATGTGAACACAGTTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp AACACACTCTGTATCAATGTGGACAGCAGATATTTCAGAAGTTCGAACATAATTAAGCTATTAGGTTTCTaGCTGTACGACCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: NTLCINVDSRYFRSSNIIKLLGF*LYDPPL
Trigger: CAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCTT...AATTATGTTCGAACTTCTGAAATATCTGCTGTCCACATTGATACAGAGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGGGATCCTGGCGATTATaGTCAAATATGCTGTATGAC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRGSWRL*SNMLYD
Trigger: GTCATACAGCATATTTGACAATAATCGCCAGGATCC...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCACTTGGATGGTATTTaGAGTGTAATTCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRHLDGI*SVILLG
Trigger: CCCAAGGAGAATTACACTCAAAATACCATCCAAGTG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACTCTGAATGGCCACTaGGATGGTATTTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTLNGH*DGILSV
Trigger: TACACTCAAAATACCATCCAAGTGGCCATTCAGAGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAACACAGCTCATCTCTaGCTCCAGAATGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRNTAHL*LQNDLV
Trigger: AACAAGATCATTCTGGAGCAAGAGATGAGCTGTGTT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp AATCTGATCTGCCACATTCATAATTTGTATCTCCAGCTGTTGATGGATTCTTGCGCTGTTGATGGATTCTaGCACTATTTTCCATATGTG +
Preference number: 5 (lower is better)
Translates to: NLICHIHNLYLQLLMDSCAVDGF*HYFPYV
Trigger: CACATATGGAAAATAGTGCAAGAATCCATCAACAGC...GCAAGAATCCATCAACAGCTGGAGATACAAATTATGAATGTGGCAGATCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564757.5
CDS-3UTR CAA 90 bp CCCATGCTGGCAGAAAAATCACTGTCGTTGTCAGTTTCAATGTTAATATCATTGAGTTTTATGAGTGCCTaGAATGGTCCTCTTAGATTT +
Preference number: 5 (lower is better)
Translates to: PMLAEKSLSLSVSMLISLSFMSA*NGPLRF
Trigger: AAATCTAAGAGGACCATTCAAGGCACTCATAAAACT...CAATGATATTAACATTGAAACTGACAACGACAGTGATTTTTCTGCCAGCATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565507.5
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGCTAATCGCTGAAGCTTaGCTTTATAAGGTGAATCAG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRLIAEA*LYKVNQ
Trigger: CTGATTCACCTTATAAAGCAAAGCTTCAGCGATTAG...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS CCA 90 bp GCCACTTTAAAGACTATCAAACTAATGGAAGAATTGAAGAAGATCTaGATTAGGTTCTCATTCATCAGAGATGCTGTCATAACACCCAAA +
Preference number: 5 (lower is better)
Translates to: ATLKTIKLMEELKKI*IRFSFIRDAVITPK
Trigger: TTTGGGTGTTATGACAGCATCTCTGATGAATGAGAACCTAATCCAGATCTTCTTCAATTCTTCCATTAGTTTGATAGTCTTTAAAGTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGATTTTCCACCAGTTaGACATTTAGGTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRRFSTS*TFRFSI
Trigger: GATGGAAAACCTAAATGTCAAACTGGTGGAAAATCT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGAGTTTTATGAGTGCCTaGAATGGTCCTCTTAGATTT +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRSFMSA*NGPLRF
Trigger: AAATCTAAGAGGACCATTCAAGGCACTCATAAAACT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS-3UTR CAA 90 bp GACTTTTATTTCAGCGTTGCTTCATTTCACAACCATGTGAGAAAATACTCTAGGACTTTTATTTCAGCGTaGCTTCATTTCACAACCATG +
Preference number: 5 (lower is better)
Translates to: DFYFSVASFHNHVRKYSRTFISA*LHFTTM
Trigger: CATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGT...CCTAGAGTATTTTCTCACATGGTTGTGAAATGAAGCAACGCTGAAATAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563290.6
CDS TCA 90 bp CTTGCACTATTTTCCATATGTGGTGATTATAAACAATGCTGCCATTaGACATTTGTGTATATCTTGCCTGGTGGATATATGCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: LALFSICGDYKQCCH*TFVYILPGGYMHCF
Trigger: AAAGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAATGGCAGCATTGTTTATAATCACCACATATGGAAAATAGTGCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1
CDS GCA 90 bp AATGCTGCCATTGAACATTTGTGTATATCTTGCCTGGTGGATATATaGATTGCTTTCCATACAGTATATACCTCTTTTTCCAGTATTCTA +
Preference number: 5 (lower is better)
Translates to: NAAIEHLCISCLVDI*IAFHTVYTSFSSIL
Trigger: TAGAATACTGGAAAAAGAGGTATATACTGTATGGAAAGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAATGGCAGCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1
CDS GCA 72 bp TCAGCGCACGCATCTGGAAGACGGAGAGGCCATTCCTaGCCCGTTTCCTGGGCAGAGCCCCGACCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SAHASGRRRGHS*PVSWAEPRPPC
Trigger: GCAGGGCGGTCGGGGCTCTGCCCAGGAAACGGGGCAGGAATGGCCTCTCCGTCTTCCAGATGCGTGCGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563919.1
ENST00000565507.5
CDS CCA 72 bp AGGCTCTTCGCCCCTCCAGGCCTCAGCGCACGCATCTaGAAGACGGAGAGGCCATTCCTGCCCCGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: RLFAPPGLSARI*KTERPFLPRFL
Trigger: CAGGAAACGGGGCAGGAATGGCCTCTCCGTCTTCCAGATGCGTGCGCTGAGGCCTGGAGGGGCGAAGAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563919.1
ENST00000565507.5
CDS CCA 72 bp TGTGGGGTGGCGGCCGGACTGCACGATCACCTGAAATaGAAGAGCAGCCCAGGTCAGCTGCCGAAACGCCCC +
Preference number: 6 (lower is better)
Translates to: CGVAAGLHDHLK*KSSPGQLPKRP
Trigger: GGGGCGTTTCGGCAGCTGACCTGGGCTGCTCTTCCATTTCAGGTGATCGTGCAGTCCGGCCGCCACCCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS TCA 72 bp AGCACTGTGGGGTGGCGGCCGGACTGCACGATCACCTaGAATGGAAGAGCAGCCCAGGTCAGCTGCCGAAAC +
Preference number: 6 (lower is better)
Translates to: STVGWRPDCTIT*NGRAAQVSCRN
Trigger: GTTTCGGCAGCTGACCTGGGCTGCTCTTCCATTTCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS CCA 72 bp AAGGGCAACTGGCAGAGCTTCTGCAGCACTGTGGGGTaGCGGCCGGACTGCACGATCACCTGGTTATCTGGG +
Preference number: 6 (lower is better)
Translates to: KGNWQSFCSTVG*RPDCTITWLSG
Trigger: CCCAGATAACCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp ACTGGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTaGGGTGGCGGCCGGACTGCACGATCACCTGGTTAT +
Preference number: 6 (lower is better)
Translates to: TGRATGRASAAL*GGGRTARSPGY
Trigger: ATAACCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp ATCAGCCGTGGGTCACTGAAATACTGGAAGGGCAACTaGCAGAGCTTCTGCAGCACTGTGGGGTGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: ISRGSLKYWKGN*QSFCSTVGWRP
Trigger: CGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS CCA 72 bp ACTGGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTaGGGTGGCGGCCGGACTGCACGATCACCTGAAATG +
Preference number: 6 (lower is better)
Translates to: TGRATGRASAAL*GGGRTARSPEM
Trigger: CATTTCAGGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS GCA 72 bp TCACTGAAATACTGGAAGGGCAACTGGCAGAGCTTCTaGAGCACTGTGGGGTGGCGGCCGGACTGCACGATC +
Preference number: 6 (lower is better)
Translates to: SLKYWKGNWQSF*STVGWRPDCTI
Trigger: GATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS CCA 72 bp ACTGGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTaGGGTGGCGGCCGGACTGCACGATCACAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: TGRATGRASAAL*GGGRTARSQES
Trigger: ACTTTCTTGTGATCGTGCAGTCCGGCCGCCACCCCACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563246.1
CDS TCA 72 bp GGAGCAGGTCTGGTGAAGTTCAGTGGTGCGCCTTTGTaGGTGAGCCTGCACAGGCCACAAGTTCACAGGAGG +
Preference number: 6 (lower is better)
Translates to: GAGLVKFSGAPL*VSLHRPQVHRR
Trigger: CCTCCTGTGAACTTGTGGCCTGTGCAGGCTCACTCACAAAGGCGCACCACTGAACTTCACCAGACCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 72 bp TGGCTGGCAGCCCCTAGGTGGCTTCAGGATGGAAGCTaGTCACATTTTTGCGTGAGGCCTTCTGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: WLAAPRWLQDGS*SHFCVRPSALS
Trigger: TGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCAGCTTCCATCCTGAAGCCACCTAGGGGCTGCCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS TCA 72 bp TGTGGGAGCCAGACGAGGAGCTGGCACTGTGCCAGTTaGACCTCTATGACTGGCCTTGAGGCTCTAAGAAAG +
Preference number: 6 (lower is better)
Translates to: CGSQTRSWHCAS*TSMTGLEALRK
Trigger: CTTTCTTAGAGCCTCAAGGCCAGTCATAGAGGTTCAACTGGCACAGTGCCAGCTCCTCGTCTGGCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567618.5
CDS GCA 72 bp GCTGGCCATGTGCCGGAATGCAAGGGACAAGCCCTCTaGCCCTACAATAGACTGAAAAGCAGGCAGATGAAG +
Preference number: 6 (lower is better)
Translates to: AGHVPECKGQAL*PYNRLKSRQMK
Trigger: CTTCATCTGCCTGCTTTTCAGTCTATTGTAGGGGCAGAGGGCTTGTCCCTTGCATTCCGGCACATGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS GCA 72 bp GGATGGAAGCTGGTCACATTTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAAGACTGGGCGGGTGTT +
Preference number: 6 (lower is better)
Translates to: GWKLVTFLREAF*TVIGGQDWAGV
Trigger: AACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCAGCTTCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS CCA 72 bp TTAAAGGCACTAGGGAGCAGGTCTGGTGAAGTTCAGTaGTGCGCCTTTGTGAGTGAGCCTGCACAGGCCACA +
Preference number: 6 (lower is better)
Translates to: LKALGSRSGEVQ*CAFVSEPAQAT
Trigger: TGTGGCCTGTGCAGGCTCACTCACAAAGGCGCACCACTGAACTTCACCAGACCTGCTCCCTAGTGCCTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CAA 72 bp CACAGTAGAGCATATGAAGAACTCCAGCCAGGTCGGTaGCCTGAAGAGCAGCTGTCAGCCCTGTGGGATCCT +
Preference number: 6 (lower is better)
Translates to: HSRAYEELQPGR*PEEQLSALWDP
Trigger: AGGATCCCACAGGGCTGACAGCTGCTCTTCAGGCAACCGACCTGGCTGGAGTTCTTCATATGCTCTACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CAA 90 bp GGAAGAGGACACAGTAGAGCATATGAAGAACTCCAGCCAGGTCGGTaGCCTGAAGAGCAGCTGTCAGCCCTGTGGGATCCTGGCGATTAT +
Preference number: 6 (lower is better)
Translates to: GRGHSRAYEELQPGR*PEEQLSALWDPGDY
Trigger: ATAATCGCCAGGATCCCACAGGGCTGACAGCTGCTCTTCAGGCAACCGACCTGGCTGGAGTTCTTCATATGCTCTACTGTGTCCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CAA 72 bp TTTGGGGTAGCTGGCTGGCAGTTTCCATCTGGTCGATaGGCAATCAGGCAGCCCAAAACCACAGCACTGACT +
Preference number: 6 (lower is better)
Translates to: FGVAGWQFPSGR*AIRQPKTTALT
Trigger: AGTCAGTGCTGTGGTTTTGGGCTGCCTGATTGCCAATCGACCAGATGGAAACTGCCAGCCAGCTACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
ENST00000569395.5
CDS CAA 90 bp ATTGCATGTAAGAGTCCTGCGGCATGCTGCAGAAATATGGCCATCTaGGGATTCTCATCCACTGGGCCTTGCACCGAGAGGAAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: IACKSPAACCRNMAI*GFSSTGPCTERKQA
Trigger: TGCCTGCTTCCTCTCGGTGCAAGGCCCAGTGGATGAGAATCCCAAGATGGCCATATTTCTGCAGCATGCCGCAGGACTCTTACATGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS GCA 72 bp GCTCCACTTCTTCATCTGACAGTTCACGCCCCTGGATaGTGGTATTCTCTCTCACGGCTTGCTGGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: APLLHLTVHAPG*WYSLSRLAGVF
Trigger: GAAAACACCAGCAAGCCGTGAGAGAGAATACCAGCATCCAGGGGCGTGAACTGTCAGATGAAGAAGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS GCA 72 bp ATTCGAAGTCACTTGCCATTTTTGCGTGAGGCCTTCTaGACTGTCATTGGTGGGCAAGACTGGGCGGGTGTT +
Preference number: 6 (lower is better)
Translates to: IRSHLPFLREAF*TVIGGQDWAGV
Trigger: AACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACTTCGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS CCA 72 bp CCACTTCTTCATCTGACAGTTCACGCCCCTGGATGCTaGTATTCTCTCTCACGGCTTGCTGGTGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: PLLHLTVHAPGC*YSLSRLAGVFS
Trigger: GGAGAAAACACCAGCAAGCCGTGAGAGAGAATACCAGCATCCAGGGGCGTGAACTGTCAGATGAAGAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp AGATGCTCCACTTCTTCATCTGACAGTTCACGCCCCTaGATGCTGGTATTCTCTCTCACGGCTTGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: RCSTSSSDSSRP*MLVFSLTACWC
Trigger: ACACCAGCAAGCCGTGAGAGAGAATACCAGCATCCAGGGGCGTGAACTGTCAGATGAAGAAGTGGAGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS TCA 72 bp CTGGCACTGTGCCAGTTGAACCTCTATGACTGGCCTTaGGGCTCTAAGAAAGGAGGAACTGACAAGCAAAGG +
Preference number: 6 (lower is better)
Translates to: LALCQLNLYDWP*GSKKGGTDKQR
Trigger: CCTTTGCTTGTCAGTTCCTCCTTTCTTAGAGCCTCAAGGCCAGTCATAGAGGTTCAACTGGCACAGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567618.5
CDS CCA 72 bp TTGCATGTAAGAGTCCTGCGGCATGCTGCAGAAATATaGCCATCTTGGGATTCTCATCCACTGGGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: LHVRVLRHAAEI*PSWDSHPLGLA
Trigger: TGCAAGGCCCAGTGGATGAGAATCCCAAGATGGCCATATTTCTGCAGCATGCCGCAGGACTCTTACATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp TGGCCACTTGGATGGTATTTTGAGTGTAATTCTCCTTaGGACTGGCAGTGCTGGGGTCCAAGATGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: WPLGWYFECNSP*DWQCWGPRWCH
Trigger: ATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTCAAAATACCATCCAAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp AACAGTACTTTGATCAGCCGTGGGTCACTGAAATACTaGAAGGGCAACTGGCAGAGCTTCTGCAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: NSTLISRGSLKY*KGNWQSFCSTV
Trigger: CACAGTGCTGCAGAAGCTCTGCCAGTTGCCCTTCCAGTATTTCAGTGACCCACGGCTGATCAAAGTACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS CAA 72 bp TGGTCACATTTTTGCGTGAGGCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGGGTGTTATTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: WSHFCVRPSALS*VGKTGRVLFLK
Trigger: CTTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGTGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS CAA 72 bp ACTTGCCATTTTTGCGTGAGGCCTTCTGCACTGTCATaGGTGGGCAAGACTGGGCGGGTGTTATTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: TCHFCVRPSALS*VGKTGRVLFLK
Trigger: CTTCAGAAATAACACCCGCCCAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS CCA 72 bp CTTGGATGGTATTTTGAGTGTAATTCTCCTTGGGACTaGCAGTGCTGGGGTCCAAGATGGTGCCATGGAAGA +
Preference number: 6 (lower is better)
Translates to: LGWYFECNSPWD*QCWGPRWCHGR
Trigger: TCTTCCATGGCACCATCTTGGACCCCAGCACTGCCAGTCCCAAGGAGAATTACACTCAAAATACCATCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CAA 72 bp AGAGCAGCTGTCAGCCCTGTGGGATCCTGGCGATTATaGTCAAATATGCTGTATGACCTTCCAGTGACAGCA +
Preference number: 6 (lower is better)
Translates to: RAAVSPVGSWRL*SNMLYDLPVTA
Trigger: TGCTGTCACTGGAAGGTCATACAGCATATTTGACAATAATCGCCAGGATCCCACAGGGCTGACAGCTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp TTCATTTCCTGTGTTGGTATTTTTGGGGTAGCTGGCTaGCAGTTTCCATCTGGTCGATTGGCAATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: FISCVGIFGVAG*QFPSGRLAIRQ
Trigger: CTGCCTGATTGCCAATCGACCAGATGGAAACTGCCAGCCAGCTACCCCAAAAATACCAACACAGGAAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp AGCAAAGGAGAGACCAATTCCCCCTTTGCTGTTCTGTaGGTTAAGCCTACTGTAACTGGGGGAAAGCATGAA +
Preference number: 6 (lower is better)
Translates to: SKGETNSPFAVL*VKPTVTGGKHE
Trigger: TTCATGCTTTCCCCCAGTTACAGTAGGCTTAACCCACAGAACAGCAAAGGGGGAATTGGTCTCTCCTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS CAA 72 bp CTGCTGAGGAAATCTGTTAGCCAGCTCAAGATAGTCTaGGGAACCAAGGCATTTCCCTTTGGGTTGGTAAGG +
Preference number: 6 (lower is better)
Translates to: LLRKSVSQLKIV*GTKAFPFGLVR
Trigger: CCTTACCAACCCAAAGGGAAATGCCTTGGTTCCCAAGACTATCTTGAGCTGGCTAACAGATTTCCTCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000563246.1
ENST00000563290.6
CDS TCA 72 bp CTGTTAACAAAAGAAATCACTCCCTTTCGACGCAGCTaGTGGGTAGACTGGTGGACTCCATATCCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: LLTKEITPFRRS*WVDWWTPYPEH
Trigger: ATGCTCAGGATATGGAGTCCACCAGTCTACCCATCAGCTGCGTCGAAAGGGAGTGATTTCTTTTGTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS TCA 72 bp AAAATGGCTAATTCGAAGTCACTTGCCATTTTTGCGTaGGGCCTTCTGCACTGTCATTGGTGGGCAAGACTG +
Preference number: 6 (lower is better)
Translates to: KMANSKSLAIFA*GLLHCHWWARL
Trigger: CAGTCTTGCCCACCAATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACTTCGAATTAGCCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS GCA 72 bp TGGGTCAGGGCAGAACTGAACTTGCAGACTAATTCTTaGTCAGACAAATGGTACCGACAAGGATGTGGACTT +
Preference number: 6 (lower is better)
Translates to: WVRAELNLQTNS*SDKWYRQGCGL
Trigger: AAGTCCACATCCTTGTCGGTACCATTTGTCTGAGCAAGAATTAGTCTGCAAGTTCAGTTCTGCCCTGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS CCA 72 bp GAGAACACTGCTTCTTTCTTTCATAAGGGGTCAGTTTaGGGGCATAATCAGTATTTGCATGTCGCCCACTGC +
Preference number: 6 (lower is better)
Translates to: ENTASFFHKGSV*GHNQYLHVAHC
Trigger: GCAGTGGGCGACATGCAAATACTGATTATGCCCCCAAACTGACCCCTTATGAAAGAAAGAAGCAGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CCA 72 bp ACCAGTTTGACATTTAGGTTTTCAGTTCAGCATGGCTaGGGAGGCCTCAGGAAACTTGCAATCATGGTGGAA +
Preference number: 6 (lower is better)
Translates to: TSLTFRFSVQHG*GGLRKLAIMVE
Trigger: TTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGAAAACCTAAATGTCAAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538941.6
CDS CAA 72 bp AAAAAGGGCTGTGACTGGGTCAGGGCAGAACTGAACTaGCAGACTAATTCTTGCTCAGACAAATGGTACCGA +
Preference number: 6 (lower is better)
Translates to: KKGCDWVRAELN*QTNSCSDKWYR
Trigger: TCGGTACCATTTGTCTGAGCAAGAATTAGTCTGCAAGTTCAGTTCTGCCCTGACCCAGTCACAGCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS TCA 72 bp CTTGTTCTGATGGTTGTTGTAACAAGCAGCGATAAGTaGAGGGAACAGTACTTTGATCAGCCGTGGGTCACT +
Preference number: 6 (lower is better)
Translates to: LVLMVVVTSSDK*REQYFDQPWVT
Trigger: AGTGACCCACGGCTGATCAAAGTACTGTTCCCTTCACTTATCGCTGCTTGTTACAACAACCATCAGAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324767.11
ENST00000538941.6
ENST00000562948.1
ENST00000563246.1
ENST00000563290.6
CDS TCA 72 bp ACTTGTACTTGTTTTAGAAGATCTTTGGCTAATCGCTaGAGCCTTAGAAAGCGGGGAATCGCCCATCCTAGC +
Preference number: 6 (lower is better)
Translates to: TCTCFRRSLANR*SLRKRGIAHPS
Trigger: GCTAGGATGGGCGATTCCCCGCTTTCTAAGGCTTCAGCGATTAGCCAAAGATCTTCTAAAACAAGTACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568428.5
ENST00000569784.1
CDS GCA 72 bp ATATGTGGCTGTAACCTCCCAGAACTCTACGTATTGTaGAGTCAGTTACCTCCTAAGGCTAGTTCAACTGCT +
Preference number: 6 (lower is better)
Translates to: ICGCNLPELYVL*SQLPPKASSTA
Trigger: AGCAGTTGAACTAGCCTTAGGAGGTAACTGACTGCACAATACGTAGAGTTCTGGGAGGTTACAGCCACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 72 bp CAAAGGATGAACATAGGCTTTGGGGTGGGAGAGTCATaGTTACTAGTCCTGGTTCACAAACATGTAACCTTG +
Preference number: 6 (lower is better)
Translates to: QRMNIGFGVGES*LLVLVHKHVTL
Trigger: CAAGGTTACATGTTTGTGAACCAGGACTAGTAACCATGACTCTCCCACCCCAAAGCCTATGTTCATCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 72 bp GCAGTCAGTTACCTCCTAAGGCTAGTTCAACTGCTCTaGAGACAGAAAAGCATTAACCCAAAGGAAGGGATT +
Preference number: 6 (lower is better)
Translates to: AVSYLLRLVQLL*RQKSINPKEGI
Trigger: AATCCCTTCCTTTGGGTTAATGCTTTTCTGTCTCCAGAGCAGTTGAACTAGCCTTAGGAGGTAACTGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 72 bp AGGTGTAGCTGCCACGGAGTAAGGACGCCTATGAAATaGATTCAGAATGCACATTGCTTTAACAAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: RCSCHGVRTPMK*IQNAHCFNKVL
Trigger: GAGCACTTTGTTAAAGCAATGTGCATTCTGAATCCATTTCATAGGCGTCCTTACTCCGTGGCAGCTACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS CAA 72 bp TTTCATAAGGGGTCAGTTTGGGGGCATAATCAGTATTaGCATGTCGCCCACTGCTTAGCTCAGCAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: FHKGSVWGHNQY*HVAHCLAQQLF
Trigger: AAAAAGCTGCTGAGCTAAGCAGTGGGCGACATGCAAATACTGATTATGCCCCCAAACTGACCCCTTATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
CDS CAA 72 bp CTCCTAGGGTCCGATCCAAAGCAGACACTTTATTGTTaGCCCATGAGCCACTGTCTTGAACTTGTACTTGTT +
Preference number: 6 (lower is better)
Translates to: LLGSDPKQTLYC*PMSHCLELVLV
Trigger: AACAAGTACAAGTTCAAGACAGTGGCTCATGGGCAAACAATAAAGTGTCTGCTTTGGATCGGACCCTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
ENST00000563688.5
ENST00000564757.5
ENST00000568428.5
ENST00000569784.1
CDS CAA 72 bp TTGGCAATCAGGCAGCCCAAAACCACAGCACTGACTTaGAGAAGTCCAGTTGTCAAGCCTTCAAAAACTTGT +
Preference number: 6 (lower is better)
Translates to: LAIRQPKTTALT*RSPVVKPSKTC
Trigger: ACAAGTTTTTGAAGGCTTGACAACTGGACTTCTCAAAGTCAGTGCTGTGGTTTTGGGCTGCCTGATTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
ENST00000568428.5
ENST00000569395.5
CDS CAA 90 bp TATCTCTCATTTATATGTGGCTGTAACCTCCCAGAACTCTACGTATaGTGCAGTCAGTTACCTCCTAAGGCTAGTTCAACTGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: YLSFICGCNLPELYV*CSQLPPKASSTALE
Trigger: CTCCAGAGCAGTTGAACTAGCCTTAGGAGGTAACTGACTGCACAATACGTAGAGTTCTGGGAGGTTACAGCCACATATAAATGAGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CAA 90 bp TCTGGTCGATTGGCAATCAGGCAGCCCAAAACCACAGCACTGACTTaGAGAAGTCCAGTTGTCAAGCCTTCAAAAACTTGTTTATTTGTA +
Preference number: 6 (lower is better)
Translates to: SGRLAIRQPKTTALT*RSPVVKPSKTCLFV
Trigger: TACAAATAAACAAGTTTTTGAAGGCTTGACAACTGGACTTCTCAAAGTCAGTGCTGTGGTTTTGGGCTGCCTGATTGCCAATCGACCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
ENST00000569395.5
CDS CCA 72 bp CGCTATTGCTGGGAGTGTAAATTAGTTCGGCCATTATaGAAAGAAGTATGGCGATTCCTCAAAGAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: RYCWECKLVRPL*KEVWRFLKELF
Trigger: AAACAGCTCTTTGAGGAATCGCCATACTTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS CCA 72 bp CACTGTCTTGAACTTGTACTTGTTTTAGAAGATCTTTaGCTAATCGCTGAAGCCTTAGAAAGCGGGGAATCG +
Preference number: 6 (lower is better)
Translates to: HCLELVLVLEDL*LIAEALESGES
Trigger: CGATTCCCCGCTTTCTAAGGCTTCAGCGATTAGCCAAAGATCTTCTAAAACAAGTACAAGTTCAAGACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568428.5
ENST00000569784.1
CDS CAA 72 bp TTTATATGTGGCTGTAACCTCCCAGAACTCTACGTATaGTGCAGTCAGTTACCTCCTAAGGCTAGTTCAACT +
Preference number: 6 (lower is better)
Translates to: FICGCNLPELYV*CSQLPPKASST
Trigger: AGTTGAACTAGCCTTAGGAGGTAACTGACTGCACAATACGTAGAGTTCTGGGAGGTTACAGCCACATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CAA 90 bp CATCATCTTTGCTTTCTAGTGGAACACTCCAAGCTATTAGGTTTCTaGCTGTACGACCCTCCTCTGCAACTATTCTCCTTACTTTGTCAT +
Preference number: 6 (lower is better)
Translates to: HHLCFLVEHSKLLGF*LYDPPLQLFSLLCH
Trigger: ATGACAAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCTTGGAGTGTTCCACTAGAAAGCAAAGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324767.11
ENST00000563290.6
ENST00000563919.1
ENST00000564590.5
ENST00000565372.5
ENST00000565507.5
ENST00000565970.5
CDS TCA 72 bp CACATCATCCAATGTACTCACTGTGAACAAATGAACTaGGTAATTCCACACTGGATCCTGGAGGAAATTCTG +
Preference number: 6 (lower is better)
Translates to: HIIQCTHCEQMN*VIPHWILEEIL
Trigger: CAGAATTTCCTCCAGGATCCAGTGTGGAATTACTCAGTTCATTTGTTCACAGTGAGTACATTGGATGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564022.1
CDS CAA 72 bp TCATGGTTACTAGTCCTGGTTCACAAACATGTAACCTaGGGCACATTACTTAACTGTCAGCTTCTCTATCTG +
Preference number: 6 (lower is better)
Translates to: SWLLVLVHKHVT*GTLLNCQLLYL
Trigger: CAGATAGAGAAGCTGACAGTTAAGTAATGTGCCCAAGGTTACATGTTTGTGAACCAGGACTAGTAACCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CAA 72 bp TCTGTTTACTACACAAAATGGCTAATTCGAAGTCACTaGCCATTTTTGCGTGAGGCCTTCTGCACTGTCATT +
Preference number: 6 (lower is better)
Translates to: SVYYTKWLIRSH*PFLREAFCTVI
Trigger: AATGACAGTGCAGAAGGCCTCACGCAAAAATGGCAAGTGACTTCGAATTAGCCATTTTGTGTAGTAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568549.5
CDS TCA 72 bp TGCCAGAATTCTTCACATCATCCAATGTACTCACTGTaGACAAATGAACTGAGTAATTCCACACTGGATCCT +
Preference number: 6 (lower is better)
Translates to: CQNSSHHPMYSL*TNELSNSTLDP
Trigger: AGGATCCAGTGTGGAATTACTCAGTTCATTTGTTCACAGTGAGTACATTGGATGATGTGAAGAATTCTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564022.1
CDS CCA 72 bp TCCCTGATTTCCAAACTGTTTCCAGACAGAATACGGTaGGCTTACGTCTTCATAAAACACAGATGTTATGTT +
Preference number: 6 (lower is better)
Translates to: SLISKLFPDRIR*AYVFIKHRCYV
Trigger: AACATAACATCTGTGTTTTATGAAGACGTAAGCCCACCGTATTCTGTCTGGAAACAGTTTGGAAATCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CCA 72 bp GTTATTTTACAGTCCACTGCAGTACTACGCTATTGCTaGGAGTGTAAATTAGTTCGGCCATTATGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: VILQSTAVLRYC*ECKLVRPLWKE
Trigger: TTCTTTCCATAATGGCCGAACTAATTTACACTCCCAGCAATAGCGTAGTACTGCAGTGGACTGTAAAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS CCA 72 bp GAACTGAACTTGCAGACTAATTCTTGCTCAGACAAATaGTACCGACAAGGATGTGGACTTGAATTTCTGAAA +
Preference number: 6 (lower is better)
Translates to: ELNLQTNSCSDK*YRQGCGLEFLK
Trigger: TTTCAGAAATTCAAGTCCACATCCTTGTCGGTACCATTTGTCTGAGCAAGAATTAGTCTGCAAGTTCAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562948.1
CDS CAA 90 bp GTATGGCGATTCCTCAAAGAGCTGTTTAGTAGTTTTATGAGTGCCTaGAATGGTCCTCTTAGATTTTCCACCAGTTTGACATTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: VWRFLKELFSSFMSA*NGPLRFSTSLTFRF
Trigger: AAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCATAAAACTACTAAACAGCTCTTTGAGGAATCGCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS CAA 90 bp TTTACAGTCCACTGCAGTACTCTGTTTAGTAGTTTTATGAGTGCCTaGAATGGTCCTCTTAGATTTTCCACCAGTTTGACATTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: FTVHCSTLFSSFMSA*NGPLRFSTSLTFRF
Trigger: AAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCATAAAACTACTAAACAGAGTACTGCAGTGGACTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000563290.6
ENST00000563919.1
ENST00000564177.1
ENST00000564590.5
ENST00000565970.5
CDS CCA 72 bp GAGTGTAAATTAGTTCGGCCATTATGGAAAGAAGTATaGCGATTCCTCAAAGAGCTGTTTAGTAGTTTTATG +
Preference number: 6 (lower is better)
Translates to: ECKLVRPLWKEV*RFLKELFSSFM
Trigger: CATAAAACTACTAAACAGCTCTTTGAGGAATCGCCATACTTCTTTCCATAATGGCCGAACTAATTTACACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538941.6
ENST00000565507.5
CDS GCA 72 bp ATAAACAATGCTGCCATTGAACATTTGTGTATATCTTaGCTGGTGGATATATGCATTGCTTTCCATACAGTA +
Preference number: 6 (lower is better)
Translates to: INNAAIEHLCIS*LVDICIAFHTV
Trigger: TACTGTATGGAAAGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAATGGCAGCATTGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1
CDS CCA 72 bp CACTGTCTTGAACTTGTACTTGTTTTAGAAGATCTTTaGCTAATCGCTGAAGCTTTGCTTTATAAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: HCLELVLVLEDL*LIAEALLYKVN
Trigger: ATTCACCTTATAAAGCAAAGCTTCAGCGATTAGCCAAAGATCTTCTAAAACAAGTACAAGTTCAAGACAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303521.10
ENST00000324767.11
ENST00000538941.6
ENST00000563290.6
ENST00000563688.5
ENST00000564757.5
CDS CCA 72 bp ACAATGCTGCCATTGAACATTTGTGTATATCTTGCCTaGTGGATATATGCATTGCTTTCCATACAGTATATA +
Preference number: 6 (lower is better)
Translates to: TMLPLNICVYLA*WIYALLSIQYI
Trigger: TATATACTGTATGGAAAGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAATGGCAGCATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1
CDS CAA 72 bp ATGCAAATCCCTGTAAAGCTAGTTATACACTTTACATaGGACACAAAATCAGCTAAACCATCCGTAGAAAGT +
Preference number: 6 (lower is better)
Translates to: MQIPVKLVIHFT*DTKSAKPSVES
Trigger: ACTTTCTACGGATGGTTTAGCTGATTTTGTGTCCAATGTAAAGTGTATAACTAGCTTTACAGGGATTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303521.10
CDS CAA 72 bp TATGTGGTGATTATAAACAATGCTGCCATTGAACATTaGTGTATATCTTGCCTGGTGGATATATGCATTGCT +
Preference number: 6 (lower is better)
Translates to: YVVIINNAAIEH*CISCLVDICIA
Trigger: AGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAATGGCAGCATTGTTTATAATCACCACATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1
CDS GCA 72 bp ATTGAACATTTGTGTATATCTTGCCTGGTGGATATATaGATTGCTTTCCATACAGTATATACCTCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: IEHLCISCLVDI*IAFHTVYTSFS
Trigger: GGAAAAAGAGGTATATACTGTATGGAAAGCAATGCATATATCCACCAGGCAAGATATACACAAATGTTCAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564757.5
ENST00000569784.1