RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAP (Homo sapiens)

Ensembl gene IDs: ENSG00000114650

Ensembl transcript IDs: ENST00000265565.10, ENST00000320017.10, ENST00000416208.5, ENST00000416847.5, ENST00000420588.5, ENST00000428413.5, ENST00000441517.6, ENST00000448217.2, ENST00000465628.1, ENST00000468965.2, ENST00000485967.1, ENST00000487942.1, ENST00000494938.2, ENST00000495603.2, ENST00000545718.2, ENST00000648151.1

Found 1119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGCCTGGGACAGCACCGGCCCAGGCGAGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAGCCCCTCCTCCTGGTACACCCGCTG +
Preference number: 1 (lower is better)
Translates to: RGLGQHRPRRGWAQG*CADGRQPLLLVHPL
Trigger: CAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCCTCGCCTGGGCCGGTGCTGTCCCAGGCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 90 bp ACCCTCGTCCTCAGGGGCCTGGGACAGCACCGGCCCAGGCGAGGGTaGGCGCAGGGCTGGTGTGCAGACGGCCGCCAGCCCCTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: TLVLRGLGQHRPRRG*AQGWCADGRQPLLL
Trigger: CAGGAGGAGGGGCTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCCTCGCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGAGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 90 bp CTTCCCAGTGCCCAGCAGGTATGGGCCCCGGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGT +
Preference number: 1 (lower is better)
Translates to: LPSAQQVWAPVGARH*GRPEGAGPPEPPSG
Trigger: ACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCTGCTGGGCACTGGGAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 90 bp CCCCGCGCCTCCGCCGCCCGGGCCCACCACCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGTAGAGGCAGAGCAGCAGCAGCACCA +
Preference number: 1 (lower is better)
Translates to: PRASAARAHHPAARS*AGIARGRGRAAAAP
Trigger: TGGTGCTGCTGCTGCTCTGCCTCTACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGGGTGGTGGGCCCGGGCGGCGGAGGCGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 90 bp CGGCGCTGCCCTGGGCGCGGAATGCGCGTTAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACC +
Preference number: 1 (lower is better)
Translates to: RRCPGRGMRVRQSPV*ASHTQTWPARQQLT
Trigger: GGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGGCAGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR TCA 90 bp CGGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCC +
Preference number: 1 (lower is better)
Translates to: RPPAPPPGTPAAPGS*SHSLGSPESGHRPP
Trigger: GGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 90 bp CATGAGGTGGCCGCGCAGCACAAGCGGCACGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCG +
Preference number: 1 (lower is better)
Translates to: HEVAAQHKRHDLRLG*RIAVVVAGQLPAPP
Trigger: CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACGGAGATCGTGCCGCTTGTGCTGCGCGGCCACCTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 90 bp ACCTCCAGCCGGCCGCTGCTCCGCCCCACCACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: TSSRPLLRPTTMRLP*SSKLQMEPSALGAQ
Trigger: CTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGAGCAGCGGCCGGCTGGAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 90 bp CTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTC +
Preference number: 1 (lower is better)
Translates to: LLLVHPLHQAAEVIA*GVPRAATDRPVPGL
Trigger: GAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 90 bp CACCATCTGAAAGTCGTTCCCAGCTCTCCTGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGAATGCGCG +
Preference number: 1 (lower is better)
Translates to: HHLKVVPSSPEPQAR*PRHCPGAALGAECA
Trigger: CGCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAGGAGAGCTGGGAACGACTTTCAGATGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR CCA 90 bp ATGCGCGTTAGGCAATCCCCGGTCTGCGCGTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCC +
Preference number: 1 (lower is better)
Translates to: MRVRQSPVCASHTQT*PARQQLTSSMPSLA
Trigger: GGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR CCA 90 bp CATGCCACTAGGCACGGGCATGGGAGCCAGGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCC +
Preference number: 1 (lower is better)
Translates to: HATRHGHGSQGSLTQ*ALFRHLGSEVVAQP
Trigger: GGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCCCTGGCTCCCATGCCCGTGCCTAGTGGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 90 bp GCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGT +
Preference number: 1 (lower is better)
Translates to: ASWGAAGFGRKTAAT*WCGVWTASQPAAAR
Trigger: ACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 90 bp GTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCTGATGTACCTCTTGGCCAGTGTGAT +
Preference number: 1 (lower is better)
Translates to: VPALQSLPRVQAERD*DDGQQADVPLGQCD
Trigger: ATCACACTGGCCAAGAGGTACATCAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCTGGAGGGCCGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 90 bp ACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: TRSLLGSRRFRKEDG*NVMVWGVDGLTASC
Trigger: GCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 90 bp GTGAGGACCGAGGCTGCGCTGAAAAGTTGGTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCGGAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: VRTEAALKSWCQLSR*GQAGPRRGKAAEGP
Trigger: GGGGCCCTCCGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTTAATTGACACCAACTTTTCAGCGCAGCCTCGGTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 90 bp GGCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTaGGTGGCCCTGAAGGGTGAAGAGGCAGCACGAGTCCTCCAGACG +
Preference number: 1 (lower is better)
Translates to: GQHHGLVNVHGRDGP*VALKGEEAARVLQT
Trigger: CGTCTGGAGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 90 bp CTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTaGTGGGTTTTTGGTGTGCACAGGGCACTGTGTGGGTCAGGTGAC +
Preference number: 1 (lower is better)
Translates to: LGSQSPSAQQRLSGL*WVFGVHRALCGSGD
Trigger: GTCACCTGACCCACACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 90 bp TGGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCC +
Preference number: 1 (lower is better)
Translates to: WALFRHLGSEVVAQP*WVCVYQDANPDNGA
Trigger: GGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 90 bp GCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: ALFRHLGSEVVAQPC*VCVYQDANPDNGAS
Trigger: GCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 90 bp AGGAGACACAGCCCTGGCCGCCAGTCACCAGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCACAGCCCAGGTCCTGCTGAATGGAGT +
Preference number: 1 (lower is better)
Translates to: RRHSPGRQSPAGCLR*HPSLHHSPGPAEWS
Trigger: ACTCCATTCAGCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 90 bp CCTCACCCAATGGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTaGGCAGCCCTGCTGGGTCTGTGTATACCAGGATGCCAATCCAGA +
Preference number: 1 (lower is better)
Translates to: PHPMGSVPSPGQRGS*AALLGLCIPGCQSR
Trigger: TCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 90 bp ACCTCTGCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAGATGGAGAAG +
Preference number: 1 (lower is better)
Translates to: TSAGPPRSGDSPGDV*FSGSLGASGGKMEK
Trigger: CTTCTCCATCTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 90 bp ATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCACGAGTCCTCCAGACGGAACACTCTC +
Preference number: 1 (lower is better)
Translates to: MVWSMYTVVMAPEWP*RVKRQHESSRRNTL
Trigger: GAGAGTGTTCCGTCTGGAGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 90 bp ATGACACAGGAGGTGGTACAGGTAAGGGAGGTGACATCCCCACGGTaGGCAAACACATGGCTGACCCGGCTGCCAGTCAGTACATCCCAC +
Preference number: 1 (lower is better)
Translates to: MTQEVVQVREVTSPR*ANTWLTRLPVSTSH
Trigger: GTGGGATGTACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCACCTCCCTTACCTGTACCACCTCCTGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 90 bp GCGCTCAGTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: ALSPASPAQRAHTPG*AHCQSCRQWQRCPA
Trigger: TGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGACTGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 90 bp CAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTCCACGCTC +
Preference number: 1 (lower is better)
Translates to: QFPPKFLILRPPGYL*DWAVMDNLCWTSTL
Trigger: GAGCGTGGAGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR TCA 90 bp TGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCTGCAGCACAGCACCCCTTCAATGGC +
Preference number: 1 (lower is better)
Translates to: CSHNPFVQEHQSGNA*GDLLAAAAQHPFNG
Trigger: GCCATTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTGAGCCTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: LSLKPAAHATVPALPWARGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...CCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGAATGCGTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LKPAAHATVPALPWARNASSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...CGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp CCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PARQQLTSSMPSLARHSMVGARH*GRPEGA
Trigger: GGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCAC...CATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp AGGCACTGCGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCATCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: RHCGRPEGAGPPEPPSGSSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...TGAACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCATGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SARPTRRRGLPGSSSPAAWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp CCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 2 (lower is better)
Translates to: PARQQLTSSMPSLARHSMRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...CATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp TCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: SPVCASHTQTWPARQQLTPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...GGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp GGCCCAGGCGAGGGAAGGGGAGCCTTTCTCGGGGGAGCCACCCTCGTCCTCAGGACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: GPGEGRGAFLGGATLVLRTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...CCTGAGGACGAGGGTGGCTCCCCCGAGAAAGGCTCCCCTTCCCTCGCCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp AGGCACTGCGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCATCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: RHCGRPEGAGPPEPPSGSSLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...TGAACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCCCACTGTCCCGGCGCTaGCCTGGGCGCGGAATGCGC +
Preference number: 2 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPPLSRR*PGRGMR
Trigger: GCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGG...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCTGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 2 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPCRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: MAALSSTRIWRAGWASLFAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp GGCCCAGGCGAGGGAAGGGGAGCCTTTCTCGGGGGAGCCACCCTCGTCCTCAGGTCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: GPGEGRGAFLGGATLVLRSGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...CCTGAGGACGAGGGTGGCTCCCCCGAGAAAGGCTCCCCTTCCCTCGCCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp GGAGGTGACATCCCCACGGTGAGCAAACACATGGCTGACCCGGCTGCCAGTCAGACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 2 (lower is better)
Translates to: GGDIPTVSKHMADPAASQTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...CTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp CCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGTCCACCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: PGSSSPAACRRWPGTRCPPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp GTCAGACACCAGCCCCACGACAGCAAAGAGACAGAACTCCTGGATGGCGGGCACCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: VRHQPHDSKETELLDGGHHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...GTGCCCGCCATCCAGGAGTTCTGTCTCTTTGCTGTCGTGGGGCTGGTGTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp TCCTCGCTGCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: SSLLQHSTPSMASHTSSRQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...CCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGCAGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: MAALSSTRIWRAGWASLFKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp GCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 2 (lower is better)
Translates to: ASTMVWSMYTVVMAPEWPGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...GGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 2 (lower is better)
Translates to: MAALSSTRIWRAGWASLFSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp AGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 2 (lower is better)
Translates to: RASLGFRRSVTGMTGSRLVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...CAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTCCACTGTCCCGGCGCTaGCCTGGGCGCGGAATGCGC +
Preference number: 2 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVPLSRR*PGRGMR
Trigger: GCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGG...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp GGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 2 (lower is better)
Translates to: GAVPGGCGPGSRQHAASWVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...CCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: MAALSSTRIWRAGWASLFDDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTGTCATGGACAACCTCTGCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: LSWTTSAGPPRSGDSPGDQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...GTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 2 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCATGTCGATCTTCCGCGTaGAGAAGTAGATGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: PRSARPTRRRGLPGSSSPCRSSA*RSRCRQ
Trigger: TTGCCTACATCTACTTCTCCACGCGGAAGATCGACA...TGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR TCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: MAALSSTRIWRAGWASLFQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCACGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPRKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LDLHAQVTRLATSGSQVAVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp ACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: TEHSQCVVLAPSHQAPSSPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...GCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 2 (lower is better)
Translates to: LDLHAQVTRLATSGSQVAGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTAGGTATGGGCCCCGGTaGGGGCCAGGCACTGCGGCC +
Preference number: 2 (lower is better)
Translates to: LSRAATILLSKNTRAVMPRYGPR*GPGTAA
Trigger: GGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCT...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQAIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 2 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR CAA 90 bp AGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGTGTGGGTCAGGTGACAGGCCACTGT +
Preference number: 2 (lower is better)
Translates to: SHQAPSSGFQGCDGF*VCTGHCVGQVTGHC
Trigger: ACAGTGGCCTGTCACCTGACCCACACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 90 bp TACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTC +
Preference number: 2 (lower is better)
Translates to: YTRLSSLPKLQTMAA*SSTRIWRAGWASLF
Trigger: GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp CCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: PARQQLTSSMPSLARHSMWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...CATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp GACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: DGTLSVCGLGSQSPSAQQQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...CTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 2 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACACCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 2 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp GCCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: ASGGRTISSKVPHPQAPRPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...CCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp GACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 2 (lower is better)
Translates to: DGTLSVCGLGSQSPSAQQCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...CTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 2 (lower is better)
Translates to: LSRAATILLSKNTRAVMPPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp GTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 2 (lower is better)
Translates to: VYQDANPDNGASHDEALCKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...GCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp ACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 2 (lower is better)
Translates to: TEHSQCVVLAPSHQAPSSWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...GCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp AGTAGACAACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: SRQHAASWGAAGFGRKTARKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...AGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCTGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 2 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR CCA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 2 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp ACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 2 (lower is better)
Translates to: TRMPIQTTVPAMMRRCARKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...CCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACAGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp TCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 2 (lower is better)
Translates to: SGDSPGDVWFSGSLGASGWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...ACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 2 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHRPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 2 (lower is better)
Translates to: LDLHAQVTRLATSGSQVALCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACAAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 2 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR GCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 2 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp CCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGTGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 2 (lower is better)
Translates to: PVAEGQFPPKFLILRPPGVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...ACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp GATGTTGTAATAGCTGAAGAGCGTCGGCCAGTGGCGGAAGGACAATTTCCTCCAGCCCCCACTTGGACTTaGCCATGTCGATCTTCCGCG +
Preference number: 2 (lower is better)
Translates to: DVVIAEERRPVAEGQFPPAPTWT*PCRSSA
Trigger: CGCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGC...TGGAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTTCAGCTATTACAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCTGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 2 (lower is better)
Translates to: LSRAATILLSKNTRAVMPCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 2 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 90 bp ATCCGCAGCTTCACCTCCAGGTCTACCGGGGTTGAGACCACAGACTaGGTGAGCACCAACACATTCTCTAACCCAATAACCACCACAAGG +
Preference number: 2 (lower is better)
Translates to: IRSFTSRSTGVETTD*VSTNTFSNPITTTR
Trigger: CCTTGTGGTGGTTATTGGGTTAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTGGAGGTGAAGCTGCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR TCA 90 bp GTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: VYQDANPDNGASHDEALCWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...GCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR TCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: LSRAATILLSKNTRAVMPSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CCA 90 bp GATGTTGTAATAGCTGAAGAGCGTCGGCCAGTGGCGGAAGGACAATTTCCTCCATCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: DVVIAEERRPVAEGQFPPSGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...TGGAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTTCAGCTATTACAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAATCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKSPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR TCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTTGTAGGCAAACAAGATaGTGTAGGTGGTCACAAGGG +
Preference number: 2 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVCRQTR*CRWSQG
Trigger: CCCTTGTGACCACCTACATCATCTTGTTTGCCTACA...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR GCA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 72 bp GCCCAGCAGGTATGGGCCCCGGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: AQQVWAPVGARH*GRPEGAGPPEP
Trigger: AGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCTGCTGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 72 bp TCCGCCGCCCGGGCCCACCACCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGTAGAGGCAGAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SAARAHHPAARS*AGIARGRGRAA
Trigger: TGCTGCTCTGCCTCTACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGGGTGGTGGGCCCGGGCGGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 72 bp CCTGGGCGCGGAATGCGCGTTAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACGTGGCCTGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: PGRGMRVRQSPV*ASHTQTWPARQ
Trigger: CTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCGCATTCCGCGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 72 bp AAAGTCGTTCCCAGCTCTCCTGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCG +
Preference number: 3 (lower is better)
Translates to: KVVPSSPEPQAR*PRHCPGAALGA
Trigger: CGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAGGAGAGCTGGGAACGACTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR CCA 72 bp GCCGCGCAGCACAAGCGGCACGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCC +
Preference number: 3 (lower is better)
Translates to: AAQHKRHDLRLG*RIAVVVAGQLP
Trigger: GGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACGGAGATCGTGCCGCTTGTGCTGCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CAA 90 bp TGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: WCGVWTASQPAAARSALAAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...AGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCAACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: SARPTRRRGLPGSSSPAATPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR GCA 72 bp ATCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCT +
Preference number: 3 (lower is better)
Translates to: IPGLRVPHADVA*QAAAHQQHAVA
Trigger: AGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR CCA 72 bp AGGCAATCCCCGGTCTGCGCGTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTCACCAGCAGCATGCCG +
Preference number: 3 (lower is better)
Translates to: RQSPVCASHTQT*PARQQLTSSMP
Trigger: CGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR TCA 72 bp GCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGTCCCGAGAGCGGCCAC +
Preference number: 3 (lower is better)
Translates to: APPPGTPAAPGS*SHSLGSPESGH
Trigger: GTGGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 72 bp GTACACCCGCTGCACCAGGCAGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTG +
Preference number: 3 (lower is better)
Translates to: VHPLHQAAEVIA*GVPRAATDRPV
Trigger: CACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGCGGGTGTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp GGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: GVGCGRPHSQLPLVARWLSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...CAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR GCA 72 bp CTGTGTGGGTCAGGTGACAGGCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAGGGGAACTGCCCCGCC +
Preference number: 3 (lower is better)
Translates to: LCGSGDRPLCRC*CTLERQGNCPA
Trigger: GGCGGGGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCTGTCACCTGACCCACACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 72 bp AGGCACGGGCATGGGAGCCAGGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTT +
Preference number: 3 (lower is better)
Translates to: RHGHGSQGSLTQ*ALFRHLGSEVV
Trigger: AACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCCCTGGCTCCCATGCCCGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp CTCCAGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCTGATGTACCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: LQSLPRVQAERD*DDGQQADVPLG
Trigger: GCCAAGAGGTACATCAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CAA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGESGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 72 bp GGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACGGCCTCACAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: GAAGFGRKTAAT*WCGVWTASQPA
Trigger: AGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp AGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCG +
Preference number: 3 (lower is better)
Translates to: RFRKEDGCNVMV*GVDGLTASCRS
Trigger: CGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp GGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCA +
Preference number: 3 (lower is better)
Translates to: GCGPGSRQHAAS*GAAGFGRKTAA
Trigger: TGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQAAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
3UTR-3UTR CAA 90 bp GGCCCCCAGGTTACCTCTGGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 3 (lower is better)
Translates to: GPQVTSGTGLSWTTSAGPTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR TCA 72 bp AGCCCTGGCCGCCAGTCACCAGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCACAGCCCAGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: SPGRQSPAGCLR*HPSLHHSPGPA
Trigger: AGCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGTGACTGGCGGCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 72 bp CTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGTGTGGACGGCCTCACA +
Preference number: 3 (lower is better)
Translates to: LLGSRRFRKEDG*NVMVWGVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR GCA 72 bp AATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAGGAAGTAGACAACACG +
Preference number: 3 (lower is better)
Translates to: NPDNGASHDEAL*QAGAGQEVDNT
Trigger: CGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp GGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: GPPRSGDSPGDV*FSGSLGASGGK
Trigger: CTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCCCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp GGAGGTGACATCCCCACGGTGAGCAAACACATGGCTGACCCGGCTGCCAGTCAGAGCCCCCACTTGGACTaGACCATGTCGATCTTCCGC +
Preference number: 3 (lower is better)
Translates to: GGDIPTVSKHMADPAASQSPHLD*TMSIFR
Trigger: GCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGCT...CTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR TCA 72 bp CAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTaGTGGGTTTTTGGTGTGCACAGGGCACTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: QSPSAQQRLSGL*WVFGVHRALCG
Trigger: CCCACACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp TCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCACGAGTCCTCCAGACGG +
Preference number: 3 (lower is better)
Translates to: SMYTVVMAPEWP*RVKRQHESSRR
Trigger: CCGTCTGGAGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGCCATCACGACCGTGTACATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CCA 72 bp GAGTCCTCCAGACGGAACACTCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTC +
Preference number: 3 (lower is better)
Translates to: ESSRRNTLSVWS*LPVTKRPAAAF
Trigger: GAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp GAGGCTGCGCTGAAAAGTTGGTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCG +
Preference number: 3 (lower is better)
Translates to: EAALKSWCQLSR*GQAGPRRGKAA
Trigger: CGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTTAATTGACACCAACTTTTCAGCGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp GAGGTGGTACAGGTAAGGGAGGTGACATCCCCACGGTaGGCAAACACATGGCTGACCCGGCTGCCAGTCAGT +
Preference number: 3 (lower is better)
Translates to: EVVQVREVTSPR*ANTWLTRLPVS
Trigger: ACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCACCTCCCTTACCTGTACCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR GCA 72 bp TTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAGGATGCCAATCCAGAC +
Preference number: 3 (lower is better)
Translates to: FRHLGSEVVAQP*WVCVYQDANPD
Trigger: GTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp CGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGATGCCAATCCAGACAAC +
Preference number: 3 (lower is better)
Translates to: RHLGSEVVAQPC*VCVYQDANPDN
Trigger: GTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR CCA 72 bp CCAAAGTTCCTCATCCTCAGGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGACAACCTCTGCTGGACC +
Preference number: 3 (lower is better)
Translates to: PKFLILRPPGYL*DWAVMDNLCWT
Trigger: GGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCCTGAGGATGAGGAACTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 3 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 3 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp GGCGATCCGCAGCTTCACCTCCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAGCACCAACACATTCTC +
Preference number: 3 (lower is better)
Translates to: GDPQLHLQVYRG*DHRLGEHQHIL
Trigger: GAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTGGAGGTGAAGCTGCGGATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR-3UTR CAA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACACAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 3 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp TTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTGGGGTGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 3 (lower is better)
Translates to: LGSRRFRKEDGCNVMVWGVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441517.6
3UTR TCA 72 bp AATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCTGCAGCACAGCACCCC +
Preference number: 3 (lower is better)
Translates to: NPFVQEHQSGNA*GDLLAAAAQHP
Trigger: GGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp CCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGCAGACAATGGCAGCGT +
Preference number: 3 (lower is better)
Translates to: PASPAQRAHTPG*AHCQSCRQWQR
Trigger: ACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR-3UTR CAA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACAGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 3 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR TCA 72 bp TGTGGGTCTCCAAGGAGAAGAAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCCTTTTGTCCAAGAACA +
Preference number: 3 (lower is better)
Translates to: CGSPRRRNQGNR*AVQPQSFCPRT
Trigger: TGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAGACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGAATGCGGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LKPAAHATVPALPWARNAAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...CGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGAATGCGCCCCACCTGGGCCCTTaGGTCCTGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LKPAAHATVPALPWARNAPHLGP*VLLPSA
Trigger: GGCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGG...CGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp ATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTCGGGTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IAWGVPRAATDRPVPGLGSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...CCCGAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCCGCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LGWRIAVVVAGQLPAPPPPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...CGGCGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AAGCAGGTGAGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCGGAGGGCCCCGGCCGCAGTCCGGTGCGTaGCGCCCTCCCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KQVRSGWSPKREGGGGPRPQSGA*RPPSLS
Trigger: GGAGAGAGAGGGAGGGCGCCACGCACCGGACTGCGG...CCGGGGCCCTCCGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCCCCACCTGGGCCCTTaGGTCCTGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPPHLGP*VLLPSA
Trigger: GGCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGG...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CAGCACCAAGACGATGCCGGTGGCCAGGCCCAGCGCCGCCACCTTGTACAGCGTGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QHQDDAGGQAQRRHLVQRVGARH*GRPEGA
Trigger: GGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCAC...ACGCTGTACAAGGTGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp ATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTCGGGTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IAWGVPRAATDRPVPGLGWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...CCCGAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTCGGGGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: IAWGVPRAATDRPVPGLGGCSWG*GAEASG
Trigger: GCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCC...CCCGAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGAGGTATGGGCCCCGGTaGGGGCCAGGCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PARQQLTSSMPSLARHSMRYGPR*GPGTAA
Trigger: GGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCT...CATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGCCCAGGCGAGGGAAGGGGAGCCTTTCTCGGGGGAGCCACCCTCGTCCTCAGGGGCGGGCACGCAGGCTaGCCAGGAACTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: GPGEGRGAFLGGATLVLRGGHAG*PGTWHG
Trigger: ACCATGCCAAGTTCCTGGGCAGCCTGCGTGCCCGCC...CCTGAGGACGAGGGTGGCTCCCCCGAGAAAGGCTCCCCTTCCCTCGCCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp ATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTCGGGAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: IAWGVPRAATDRPVPGLGRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...CCCGAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTGAGCCTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSLKPAAHATVPALPWARPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...CCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp TTGGGTCCTGCTTCCCAGTGCCCAGCAGGTATGGGCCCCGGTGGGGGCCAGGCAGCCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: LGPASQCPAGMGPGGGQAALGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGGC...TGCCTGGCCCCCACCGGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATACCACTGTCCCGGCGCTaGCCTGGGCGCGGAATGCGC +
Preference number: 4 (lower is better)
Translates to: GRQPLLLVHPLHQAAEVIPLSRR*PGRGMR
Trigger: GCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGG...TATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCGGCGGGCACGCAGGCTaGCCAGGAACCCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: VPGGCGPGSRQHAASWGAGGHAG*PGTHSG
Trigger: GCCTGAGTGGGTTCCTGGGCAGCCTGCGTGCCCGCC...GGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR TCA 90 bp ATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGGTGCCGGGGCTCGGGGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCC +
Preference number: 4 (lower is better)
Translates to: IAWGVPRAATDRPVPGLGAGRPG*WCRRPS
Trigger: GGATGGTCTCCTACACCATCACCCTGGTCTTCCAGC...CCCGAGCCCCGGCACCGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR TCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGGCCCCCACTTGGACTTaGCCATGTCGATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPAPTWT*PCRSSA
Trigger: CGCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGC...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR TCA 90 bp GGCACTGCGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCAGAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: GTAAVLRVPALQSLPRVQKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...CTGAACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp CGTCTCGGGTGGCGCATAGCCGTAGTCGTCGCAGGGCAGCTCCCCGCGCCTCCGCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGWRIAVVVAGQLPAPPQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...CGGAGGCGCGGGGAGCTGCCCTGCGACGACTACGGCTATGCGCCACCCGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATACCACTGTCCCGGCGCTaGCTGCCTGGGCGCGGAATG +
Preference number: 4 (lower is better)
Translates to: GRQPLLLVHPLHQAAEVIPLSRR*LPGRGM
Trigger: CATTCCGCGCCCAGGCAGGCAGCGCCGGGACAGTGG...TATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEEPQAR*PRHCPG
Trigger: GCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTC...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGAGCCTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSLKPAAHATVPALPWARVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...CCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp CTCACCCAATGGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: LTQWALFRHLGSEVVAQPCRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...GGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VPGGCGPGSRQHAASWGAAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...GGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GAVPGGCGPGSRQHAASWAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...CCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CGTAGTTGCGCGGGCATAGCACGCGGTAGAGGCAGAGCAGCAGCAGCACCAAGACGGCCCGCAGTCCGGTaGGTGGCGCCCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSCAGIARGRGRAAAAPRRPAVR*VAPSLS
Trigger: AGAGAGGGAGGGCGCCACGCACCGGACTGCGGGCCG...TCTTGGTGCTGCTGCTGCTCTGCCTCTACCGCGTGCTATGCCCGCGCAACTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp AGACGGCTGCAACGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRLQRDGVGCGRPHSQLPHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...CGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTTGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAAWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAARQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GGCCCCCAGGTTACCTCTGGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTCCACTGTCCCGGCGCTaGCCTGGGCGCGGAATGCGC +
Preference number: 4 (lower is better)
Translates to: GPQVTSGTGLSWTTSAGPPLSRR*PGRGMR
Trigger: GCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGG...AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCACCCAATGGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCCCGCAGTCCGGTGCGTaGCGCCCTCCCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LTQWALFRHLGSEVVAQPPQSGA*RPPSLS
Trigger: GGAGAGAGAGGGAGGGCGCCACGCACCGGACTGCGG...GGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCCCACTGCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VWTASQPAAARSALAVPLPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...CAGTGGGACAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCCCACTGAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: VWTASQPAAARSALAVPLSVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...CAGTGGGACAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGTCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RASLGFRRSVTGMTGSRLSSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...CAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GVGCGRPHSQLPLVARWLTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...CAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp AGGCACTGCGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCAGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: RHCGRPEGAGPPEPPSGSEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...TGAACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCGGCCCGCAGTCCGGTaGGTGGCGCCCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTRPAVR*VAPSLS
Trigger: AGAGAGGGAGGGCGCCACGCACCGGACTGCGGGCCG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AAGCAGGTGAGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCGGAGGGCCCCGGTCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KQVRSGWSPKREGGGGPRSWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...CCGGGGCCCTCCGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCAGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SARPTRRRGLPGSSSPAAAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCCTCAGGGGGCAGTCGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ASGGSRLFRSASSIRRMSGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...TGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GAVPGGCGPGSRQHAASWIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...CCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: DNGASHDEALCQAGAGQEKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...TTCCTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCGCAGGTTTCTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GCGPGSRQHAASWGAAGFSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...GAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACGGCCCGCAGTCCGGTaGGTGGCGCCCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSARPAVR*VAPSLS
Trigger: AGAGAGGGAGGGCGCCACGCACCGGACTGCGGGCCG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVGCGRPHSQLPLVARWLVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...CAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSVGARH*GRPEGA
Trigger: GGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCAC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSVGARH*GRPEGA
Trigger: GGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCAC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGTCCAGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGSSSPAACRRWPGTRCPGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: DGTLSVCGLGSQSPSAQQERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...CTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCCGCAGTCCGGTGCGTaGCGCCCTCCCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCPQSGA*RPPSLS
Trigger: GGAGAGAGAGGGAGGGCGCCACGCACCGGACTGCGG...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCCCAGGCGAGGGAAGGGGAGCCTTTCTCGGGGGAGCCACCCTCGTCCTCAGGCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPGEGRGAFLGGATLVLRHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...CCTGAGGACGAGGGTGGCTCCCCCGAGAAAGGCTCCCCTTCCCTCGCCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCATCCTTGAAGTGCACGTaGACCAGGCTCTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: SARPTRRRGLPGSSSPAASLKCT*TRLSAR
Trigger: TCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGA...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CCA 90 bp TCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPVCASHTQTWPARQQLTVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...GGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAGGTATGGGCCCCGGTaGGGGCCAGGCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALARYGPR*GPGTAA
Trigger: GGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCT...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCAGGTATGGGCCCCGGTaGGGGCCAGGCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSRYGPR*GPGTAA
Trigger: GGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCT...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTSSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCAGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: SARPTRRRGLPGSSSPAAAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AAGCAGGTGAGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCGGAGGGCCCCGGGCCAGCACCATGGTCTaGTCAATGTACACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KQVRSGWSPKREGGGGPRASTMV*SMYTVV
Trigger: CACGACCGTGTACATTGACCAGACCATGGTGCTGGC...CCGGGGCCCTCCGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTTGCCATCCCGGAAAGTaGCCATGGATCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WCGVWTASQPAAARSALACHPGK*PWITLA
Trigger: TGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCA...AGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACGCACTGCGGCCGTCCTaGGGGTGCCGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHALRPS*GCRPSR
Trigger: TCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGC...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFCRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGTGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVCRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSACRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGTGCCGGGGCTCGGGCTaGGTGGGCTGTGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVCRGSG*VGCEDR
Trigger: TCGGTCCTCACAGCCCACTCAGCCCGAGCCCCGGCA...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAGATGGAGAAGGCAGGGCGGCCCGCAGTCCGGTaGGTGGCGCCCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VWFSGSLGASGGKMEKAGRPAVR*VAPSLS
Trigger: AGAGAGGGAGGGCGCCACGCACCGGACTGCGGGCCG...CCCTGCCTTCTCCATCTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTGGGTCCTGCTTCCCAGTGCCCAGCAGGTATGGGCCCCGGTGGGGGCCAGGCAGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: LGPASQCPAGMGPGGGQAGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...TGCCTGGCCCCCACCGGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTCTCCGCCCGAAGGCTaGAGTTGGGGCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPSPPEG*SWGWGA
Trigger: TGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp CCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGTCCATGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: PGSSSPAACRRWPGTRCPWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGTGTCCCGGCGCTGCCTaGCTGGGCGCGGAATGCGCG +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWCPGAA*LGAECA
Trigger: CGCGCATTCCGCGCCCAGGCAGGCAGCGCCGGGACA...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGTCCCGGCGCTGCCTaGCTGGGCGCGGAATGCGCG +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHCPGAA*LGAECA
Trigger: CGCGCATTCCGCGCCCAGGCAGGCAGCGCCGGGACA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSEPQAR*PRHCPG
Trigger: GCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCCCGCAGTCCGGTGCGTaGCGCCCTCCCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSPQSGA*RPPSLS
Trigger: GGAGAGAGAGGGAGGGCGCCACGCACCGGACTGCGG...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CGCGTTAGGCAATCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RVRQSPVCASHTQTWPARHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...CCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CGCGTTAGGCAATCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RVRQSPVCASHTQTWPARVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...CCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTAGACCATCCTCTTCCTaGTGTAGAGGCTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAARPSSS*CRGSPR
Trigger: GCGGGGTGAGCCTCTACACCAGGAAGAGGATGGTCT...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATAGGTATGGGCCCCGGTaGGGGCCAGGCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHRYGPR*GPGTAA
Trigger: GGCCGCAGTGCCTGGCCCCCACCGGGGCCCATACCT...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCATCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALASSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPSSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSSSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCACCAATCTCCTCCTTaGAGTGCACGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEHQSPP*SARGPG
Trigger: GCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR TCA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACGCCCCCACTTGGACTTaGCCATGTCGATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHAPTWT*PCRSSA
Trigger: CGCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGC...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCCCACTGTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VWTASQPAAARSALAVPLWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...CAGTGGGACAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAGGCGAGGGAAGGTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QLQAPDGTLGTGGPGEGRWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...CCTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCAGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGCTGGCCAGGCACTCGATGAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: PARQQLTSSMPSLARHSMNQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...CATCGAGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: RDGVGCGRPHSQLPLVAREWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...ACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp CGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: RDGVGCGRPHSQLPLVARAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...ACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGCGGCCCGCAGTCCGGTaGGTGGCGCCCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RLFRSASSIRRMSMDRTVRPAVR*VAPSLS
Trigger: AGAGAGGGAGGGCGCCACGCACCGGACTGCGGGCCG...CACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGERKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGTGGGGGCCAGGCACTaGGGCCGTCCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTVGARH*GRPEGA
Trigger: GGCACCCTCAGGACGGCCGCAGTGCCTGGCCCCCAC...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TRMPIQTTVPAMMRRCARGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...CCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HSQCVVLAPSHQAPSSGFHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...AAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTTGTCCCGGCGCTGCCTaGCTGGGCGCGGAATGCGCG +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVCPGAA*LGAECA
Trigger: CGCGCATTCCGCGCCCAGGCAGGCAGCGCCGGGACA...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCCACTGTCCCGGCGCTaGCTGCCTGGGCGCGGAATG +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHPLSRR*LPGRGM
Trigger: CATTCCGCGCCCAGGCAGGCAGCGCCGGGACAGTGG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCACTGTCCCGGCGCTaGCTGCCTGGGCGCGGAATG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALPLSRR*LPGRGM
Trigger: CATTCCGCGCCCAGGCAGGCAGCGCCGGGACAGTGG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHEPQAR*PRHCPG
Trigger: GCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTC...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQEPQAR*PRHCPG
Trigger: GCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGEPQAR*PRHCPG
Trigger: GCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TCCTCGCTGCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLLQHSTPSMASHTSSRDDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...CCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGCAGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGCCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGALGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGGC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGCCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRALGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGGC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACACCACTGTCCCGGCGCTaGCCTGGGCGCGGAATGCGC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTPLSRR*PGRGMR
Trigger: GCGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGG...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGCCGCAGTCCGGTGCGTaGCGCCCTCCCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQPQSGA*RPPSLS
Trigger: GGAGAGAGAGGGAGGGCGCCACGCACCGGACTGCGG...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CGCGTTAGGCAATCCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: RVRQSPVCASHTQTWPARDHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...CCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCCCACTGGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: VWTASQPAAARSALAVPLVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...CAGTGGGACAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGACGGCTGCAACGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: RRLQRDGVGCGRPHSQLPGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...CGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCACCCCACCTGGGCCCTTaGGTCCTGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSPHLGP*VLLPSA
Trigger: GGCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGG...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCCCCACCTGGGCCCTTaGGTCCTGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRPHLGP*VLLPSA
Trigger: GGCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRSVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATCCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGATGTACCTCTTGGCCAGGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTC +
Preference number: 4 (lower is better)
Translates to: QAERDWDDGQQADVPLGQDLRLG*RIAVVV
Trigger: GACGACTACGGCTATGCGCCACCCGAGACGGAGATC...CTGGCCAAGAGGTACATCAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHSSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTTCACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MAALSSTRIWRAGWASLFTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...GAACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: ASTMVWSMYTVVMAPEWPGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...GGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CCCCGGTCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCACAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PRSARPTRRRGLPGSSSPQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...TGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTAGGTATGGGCCCCGGTaGGGGCCAGGAAGTAGACAA +
Preference number: 4 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCRYGPR*GPGSRQ
Trigger: TTGTCTACTTCCTGGCCCCCACCGGGGCCCATACCT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR TCA 90 bp AGACGGCTGCAACGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCCTTCACAGGGGTGGTaGATTCCACAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRLQRDGVGCGRPHSQLPPSQGW*IPQVLF
Trigger: GAACAGGACCTGTGGAATTCACCACCCCTGTGAAGG...CGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TCCTCGCTGCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLLQHSTPSMASHTSSRWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...CCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGCAGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: NTQPLGEPQVSEGRRLQRGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...ACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCCCCCAGGTTACCTCTGGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPQVTSGTGLSWTTSAGPQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCAGTTGGGGCTGGGGTaGAGAAGCATCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCQLGLG*RSIRRA
Trigger: TGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTG...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATCTCCGCCCGAAGGCTaGAGTTGGGGCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSASPPEG*SWGWGA
Trigger: TGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAGATGGAGAAGGCAGGGCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VWFSGSLGASGGKMEKAGHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...CCCTGCCTTCTCCATCTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGCATGATGAGGCGCTGTaGCAGGCGGGTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQHDEAL*QAGAGQ
Trigger: CTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATG...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGACGGCTGCAACGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: RRLQRDGVGCGRPHSQLPVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...CGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACGTTGCAGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGTGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCAGCACCAAGACGATaGCGGTGGCCAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQAAPRR*RWPGPA
Trigger: CGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTGC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCCACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTGCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPCLGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGCA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTTGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAACEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTGCAGGTACCTGTGGTaGCAGCACCTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LDLHAQVTRLATSGSQVACRYLW*QHLPSC
Trigger: GCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCA...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TGCAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAGGCGAGGGAAGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSSKLQMEPSALGAQAREVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...TTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: AGPPRSGDSPGDVWFSGSCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...GCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCACCCAATGGGCTCTGTTCCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LTQWALFRHLGSEVVAQPCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...GGGCTGCGCAACTACCTCGCTGCCCAGGTGACGGAACAGAGCCCATTGGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CGTAGTTGCGCGGGCATAGCACGCGGTAGAGGCAGAGCAGCAGCAGCACCAAGACAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RSCAGIARGRGRAAAAPRQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...TCTTGGTGCTGCTGCTGCTCTGCCTCTACCGCGTGCTATGCCCGCGCAACTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCAGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: ASTMVWSMYTVVMAPEWPPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...GGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGDSPGDVWFSGSLGASGQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...ACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCACCTGGGCCCTTaGGTCCTGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAPHLGP*VLLPSA
Trigger: GGCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGG...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSSVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSASVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGTCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRSMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTCAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACATGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: RASLGFRRSVTGMTGSRLNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...CAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACTCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHSSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTTCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQASSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGSSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFSSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATATCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRQPLLLVHPLHQAAEVISGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...TATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 72 bp CTGAGCTCACTGCCAAAGTTGCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSLPKLQTMAA*SSTRIWRAGWA
Trigger: GGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAAATCTCGCCGCCATTaGGGGTGGGCGTCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGKSRRH*GWASGR
Trigger: TCGGCCTGACGCCCACCCTCAATGGCGGCGAGATTT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp TCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTAAATCTCGCCGCCATTaGGGGTGGGCGTCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SGDSPGDVWFSGSLGASGKSRRH*GWASGR
Trigger: TCGGCCTGACGCCCACCCTCAATGGCGGCGAGATTT...ACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR TCA 90 bp CTGTCATGGACAACCTCTGCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSWTTSAGPPRSGDSPGDQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...GTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCITSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTCCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TEHSQCVVLAPSHQAPSSSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...GCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGCCCCTGAGTGGCCCTaGAGGGTGAAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHAPEWP*RVKRQH
Trigger: GTGCTGCCTCTTCACCCTTCAGGGCCACTCAGGGGC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGPPRSGDSPGDVWFSGSEWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...GCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGGCGGGCACGCAGGCTaGCCAGGAACTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQGGHAG*PGTWHG
Trigger: ACCATGCCAAGTTCCTGGGCAGCCTGCGTGCCCGCC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGCGGGCACGCAGGCTaGCCAGGAACTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQGGHAG*PGTWHG
Trigger: ACCATGCCAAGTTCCTGGGCAGCCTGCGTGCCCGCC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCCAGTTGGGGCTGGGGTaGAGAAGCATCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSQLGLG*RSIRRA
Trigger: TGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTG...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCATCTCCGCCCGAAGGCTaGAGTTGGGGCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPSPPEG*SWGWGA
Trigger: TGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGA...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTATCTCCTCCTTGAAGTaGACGTGGACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCISSLK*TWTRLS
Trigger: GGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGAT...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TCTGCGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCACTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: SARPTRRRGLPGSSSPAALCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...TGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: GAVPGGCGPGSRQHAASWLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...CCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: AGPPRSGDSPGDVWFSGSVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...GCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGGTCCTGCTTCCCAGTaGCCAGCAGGTATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHGPASQ*PAGMGP
Trigger: GGGGCCCATACCTGCTGGGCACTGGGAAGCAGGACC...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGTGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGTGGGCCCTTGGGTCCTaGTTCCCAGTGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQWALGS*FPVPSR
Trigger: CCTGCTGGGCACTGGGAAGCAGGACCCAAGGGCCCA...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCCACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGCACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACACGCAGACGTGGCCTaGCAGGCAGCAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAHADVA*QAAAHQ
Trigger: CTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTG...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGTGCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALCLGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGCA...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp CTCCAGACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: LQTEHSQCVVLAPSHQAPRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...GGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TCCAAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SKNTRAVMPEETSSLLQHGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...GTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPDDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACCAGCAGCATGCCGTCGGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: SHTQTWPARQQLTSSMPSAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...CGACGGCATGCTGCTGGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGTGGACCAGCTCTCGCTaGTTAGGCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRMPIQTTVPAMMRRCARWTSSR*LGPLRL
Trigger: CAGCCTGAGTGGGCCTAAGCAGCGAGAGCTGGTCCA...CCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416208.5
CDS-3UTR CCA 90 bp TGCAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAGGCGAGGGAAGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: CSSKLQMEPSALGAQAREDHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...TTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGATGTACCTCTTGGCCAGCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QAERDWDDGQQADVPLGQHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...CTGGCCAAGAGGTACATCAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAGCSWG*GAEASG
Trigger: GCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPGCSWG*GAEASG
Trigger: GCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp AACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTTCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: NTQPLGEPQVSEGRRLQRSLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...ACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCGCTCGTAGCGCGTTaGCTGTCCCACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGPLVAR*LSHWLG
Trigger: GCCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGG...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCCCCCAGGTTACCTCTGGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GPQVTSGTGLSWTTSAGPSPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTGGGGTCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: LGSRRFRKEDGCNVMVWGPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAGGCGGAGCGTGACTaGGATGACGGGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGQAERD*DDGQQA
Trigger: AGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTG...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGSVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAGCGTGACGTCTCCATaGGCCTGCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWSVTSP*ACTPPG
Trigger: CCCAGGTGGGGTGCAGGCCCATGGAGACGTCACGCT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAAGTAGCCGATGAGGATGATGCCCAGCTCCGTGGCCATGTTCTTCATGATGGACCAAGACGATGCCGGTaGCCAGGCCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: EVADEDDAQLRGHVLHDGPRRCR*PGPAPP
Trigger: TGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGG...TCCATCATGAAGAACATGGCCACGGAGCTGGGCATCATCCTCATCGGCTACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPSMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCTCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSSMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGTCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCCAAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SKNTRAVMPEETSSLLQHAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...GTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGTCATGGACAACCTCTGCTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: LSWTTSAGPPRSGDSPGDLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...GTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 72 bp CGAGTCCTCCAGACGGAACACTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: RVLQTEHSQCVV*APSHQAPSSGF
Trigger: AAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTCTGGAGGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTGCCATCCCGGAAAGTaGCCATGGATCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCCHPGK*PWITLA
Trigger: TGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCA...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGCCCCCACTTGGACTTaGCCATGTCGATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPAPTWT*PCRSSA
Trigger: CGCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGCCCCCACTTGGACTTaGCCATGTCGATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFAPTWT*PCRSSA
Trigger: CGCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTAAATCTCGCCGCCATTaGGGGTGGGCGTCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIKSRRH*GWASGR
Trigger: TCGGCCTGACGCCCACCCTCAATGGCGGCGAGATTT...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: WCGVWTASQPAAARSALAWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...AGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQAKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GAAGAAGTCAGACACCAGCCCCACGACAGCAAAGAGACAGAACTCCTGGATGGCACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: EEVRHQPHDSKETELLDGTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...GCCATCCAGGAGTTCTGTCTCTTTGCTGTCGTGGGGCTGGTGTCTGACTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTCCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQAPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGGCACTCGATGTCCATaGGGTGGCCGCGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHGTRCP*GGRAAQ
Trigger: TTGTGCTGCGCGGCCACCTCATGGACATCGAGTGCC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGTCCCACTGACAAAGAACAACATGTaGAGGTACCTGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VWTASQPAAARSALAVPLTKNNM*RYLWWQ
Trigger: CTGCCACCACAGGTACCTGCACATGTTGTTCTTTGT...CAGTGGGACAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATCAGTTGGGGCTGGGGTaGAGAAGCATCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHQLGLG*RSIRRA
Trigger: TGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTG...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCAGTTGGGGCTGGGGTaGAGAAGCATCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALQLGLG*RSIRRA
Trigger: TGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTRKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HSQCVVLAPSHQAPSSGFRKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...AAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCTCACCAGCAGCATaGCGTCGCTGGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHSSPAA*RRWPGT
Trigger: AGTGCCTGGCCAGCGACGGCATGCTGCTGGTGAGCT...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATGCCTGGGCGCGGAATaGGCGTTAGGCAATCCCCGG +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTCLGAE*ALGNPR
Trigger: CCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGCA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGGGGTCCCTCTAAACTaGAGGGGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPGVPLN*RGLRAV
Trigger: CACTGCCCTCAGCCCCCTGCAGTTTAGAGGGACCCC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTGAGAGGCAGGGGAACTaGCCCGCCCTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSRAATILLSKNTRAVMPERQGN*PALGSL
Trigger: GAGGGACCCCAGGGCGGGGCAGTTCCCCTGCCTCTC...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GTTGCGCAGCCCTGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VAQPCWVCVYQDANPDNGWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...ACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCTCTCGCCACTCAGGCTaGTCAGTAGGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ASTMVWSMYTVVMAPEWPSRHSG*SVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGCGAGA...GGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320017.10
CDS-3UTR CCA 90 bp AGTAGACAACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTTGCAGGTACCTGTGGTaGCAGCACCTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRQHAASWGAAGFGRKTACRYLW*QHLPSC
Trigger: GCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCA...AGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTGTCTCTCAGCACGTaGTTCCGGATCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTLSLST*FRISST
Trigger: GGTGGAGGAGATCCGGAACCACGTGCTGAGAGACAG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGTCCTTGAAGTGCACGTaGACCAGGCTCTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVSLKCT*TRLSAR
Trigger: TCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGA...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTTCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQASLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGTCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVSLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPSLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGCTGACCCGGCTGCCAGTCAGTACATCCCACAGGCAGATGGCCCCATCTTGTTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: WLTRLPVSTSHRQMAPSCCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...ACAAGATGGGGCCATCTGCCTGTGGGATGTACTGACTGGCAGCCGGGTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp TTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTGGGGTGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LGSRRFRKEDGCNVMVWGGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSDLRLG*RIAVVV
Trigger: GACGACTACGGCTATGCGCCACCCGAGACGGAGATC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGSMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCATCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPSMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTTCGATGTCCATGAGGTaGCCGCGCAGCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCISMSMR*PRSTSG
Trigger: GCCGCTTGTGCTGCGCGGCCACCTCATGGACATCGA...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACATCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATCCCACACGCAGACGTaGCCTGCCAGGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTSHTQT*PARQQL
Trigger: GAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCTGAAGTCATAGCCTaGGGAGTCCCGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAAEVIA*GVPRAA
Trigger: GGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAGGGTGGGCGCAGGGCTaGTGTGCAGACGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKGWAQG*CADGRQ
Trigger: CTGGCGGCCGTCTGCACACCAGCCCTGCGCCCACCC...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAATCGTCCTCAGGGGCCTaGGACAGCACCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKSSSGA*DSTGPG
Trigger: GCCTGGGCCGGTGCTGTCCCAGGCCCCTGAGGACGA...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCTCCAAGCTCCAGATaGAACCCTCGGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPAPSSR*NPRHWG
Trigger: CCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACACAGCACCCCTTCAATaGCGTCCCACACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHTAPLQ*RPTPPA
Trigger: GGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: VYQDANPDNGASHDEALCGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...GCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGGAACTGCCCCGCCCTaGGGTCCCTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHGTAPP*GPSKLQ
Trigger: CTGCAGTTTAGAGGGACCCCAGGGCGGGGCAGTTCC...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAGATGGAGAAGGCAGGGAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWFSGSLGASGGKMEKAGKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...CCCTGCCTTCTCCATCTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATCCAGCACCAGGATCTaGCGGGCAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTSSTRI*RAGWAS
Trigger: TGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCCCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCACCAATCTCCTCCTTaGAGTGCACGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFHQSPP*SARGPG
Trigger: GCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTGGTCACAAGGGGGATaGGCTCAGCGACACCAATCT +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCWSQGG*AQRHQS
Trigger: AGATTGGTGTCGCTGAGCTCATCCCCCTTGTGACCA...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp TGCAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAGGCGAGGGAAAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 4 (lower is better)
Translates to: CSSKLQMEPSALGAQARERPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...TTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAAGACGGCTGCAACGTaGTGGTGTGGGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGKTAAT*WCGVWT
Trigger: CGTCCACACCCCACACCATCACGTTGCAGCCGTCTT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTGGGAAGATGGAGAAGGCAGGGCCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VWFSGSLGASGGKMEKAGPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...CCCTGCCTTCTCCATCTTCCCACCTGATGCCCCTAAGCTACCTGAGAACCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCCACCTTGTACAGCGTaGCGTCTCCATGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHPPCTA*RLHGPA
Trigger: TGCAGGCCCATGGAGACGTCACGCTGTACAAGGTGG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACCAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: NTQPLGEPQVSEGRRLQRNQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...ACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCACTGTGTGGGTCAGGTaGCAGGCCACTGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGTVWVR*QATVSL
Trigger: CAGCGACACAGTGGCCTGTCACCTGACCCACACAGT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCAATGTACACGGTCGTaGTGGCCCCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALQCTRS*WPLSGP
Trigger: AGGGCCACTCAGGGGCCATCACGACCGTGTACATTG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: HSQCVVLAPSHQAPSSGFEWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...AAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTGGGGTGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LGSRRFRKEDGCNVMVWGAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp ACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: TRMPIQTTVPAMMRRCARGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...CCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGATCTCCTCCTTGAAGTaGACGTGGACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWISSLK*TWTRLS
Trigger: GGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGAT...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPRKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFRKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSARKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATCCAGCTGCCCGTAGTTaGGCGGGCATAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: CWVCVYQDANPDNGASHDPAARS*AGIARG
Trigger: ACCGCGTGCTATGCCCGCGCAACTACGGGCAGCTGG...ATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGSWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGGAGACCTCCTCGCTaGTGCAGCACAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGRRPPR*CSTAPL
Trigger: AAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCTCCT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACCACTGTGTCGCTGCTaGTGTACACTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAPLCRC*CTLERQ
Trigger: CTGCCTCTCCAGTGTACAGCAGCAGCGACACAGTGG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALADDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTTGGGCAAGGAGGCCCTaGGCTCAGTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVWARRP*AQSSFS
Trigger: GGAGAAGCTGGACTGAGCGCAGGGCCTCCTTGCCCA...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCAGGTACCTGTGGTaGCAGCACCTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHCRYLW*QHLPSC
Trigger: GCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACTGCAGGTACCTGTGGTaGCAGCACCTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHCRYLW*QHLPSC
Trigger: GCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCA...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCTGTCTCTCAGCACGTaGTTCCGGATCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGLSLST*FRISST
Trigger: GGTGGAGGAGATCCGGAACCACGTGCTGAGAGACAG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCTGTCTCTCAGCACGTaGTTCCGGATCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRLSLST*FRISST
Trigger: GGTGGAGGAGATCCGGAACCACGTGCTGAGAGACAG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGAGCTTCCTAAGGCCTaGCAGCAGGTCGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPELPKA*QQVGHL
Trigger: CAAGTGACCGACCTGCTGCCAGGCCTTAGGAAGCTC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAGACCATCCTCTTCCTaGTGTAGAGGCTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGRPSSS*CRGSPR
Trigger: GCGGGGTGAGCCTCTACACCAGGAAGAGGATGGTCT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGGCTGCCCAGGAACTTaGCATGGTAGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTGCPGT*HGSAGR
Trigger: TCTTCCAGCACTACCATGCCAAGTTCCTGGGCAGCC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp GGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GSVYTRMPIQTTVPAMMRGCSWG*GAEASG
Trigger: GCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCC...CCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACTCCTTGAAGTGCACGTaGACCAGGCTCTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHSLKCT*TRLSAR
Trigger: TCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGA...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATCCTTGAAGTGCACGTaGACCAGGCTCTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTASLKCT*TRLSAR
Trigger: TCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTCGCTGCTTAGGCCTTaGGCGATCCGCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGSLLRP*AIRSFT
Trigger: GGTGAAGCTGCGGATCGCCCAAGGCCTAAGCAGCGA...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCAACGTGATGGTGTGGGGTAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSRRFRKEDGCNVMVWGKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALACNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFSPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVSPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQDLRLG*RIAVVV
Trigger: GACGACTACGGCTATGCGCCACCCGAGACGGAGATC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTC +
Preference number: 4 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKDLRLG*RIAVVV
Trigger: GACGACTACGGCTATGCGCCACCCGAGACGGAGATC...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGATCTCCGTCTCGGGTaGCGCATAGCCGTAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPDLRLG*RIAVVV
Trigger: GACGACTACGGCTATGCGCCACCCGAGACGGAGATC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGCATGCCGTCGCTaGCCAGGCACTCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVAACRR*PGTRCP
Trigger: TGGACATCGAGTGCCTGGCCAGCGACGGCATGCTGC...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAATGGAACCCTCGGCACTaGGGGCCCAGGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKWNPRH*GPRRGK
Trigger: CTTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCA...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEHSQCVVLAPSHQAPSSHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...GCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCATCCCGGAAAGTaGCCATGGATCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHCHPGK*PWITLA
Trigger: TGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATGCCATCCCGGAAAGTaGCCATGGATCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTACHPGK*PWITLA
Trigger: TGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCCTTCACAGGGGTGGTaGATTCCACAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSPSQGW*IPQVLF
Trigger: GAACAGGACCTGTGGAATTCACCACCCCTGTGAAGG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCCTTCACAGGGGTGGTaGATTCCACAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRPSQGW*IPQVLF
Trigger: GAACAGGACCTGTGGAATTCACCACCCCTGTGAAGG...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGGTGCCAGGGAAACACTaGGGACTTCACAAATATCTG +
Preference number: 4 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVVPGKH*GLHKYL
Trigger: CAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCAC...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR TCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCGTCTTTGAGTGTGGCTaGAGTCTGCAGGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPVFECG*SLQGFR
Trigger: CCTAAAACCCTGCAGACTTCAGCCACACTCAAAGAC...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGAGRPG*WCRRPS
Trigger: GGATGGTCTCCTACACCATCACCCTGGTCTTCCAGC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCC +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTAGRPG*WCRRPS
Trigger: GGATGGTCTCCTACACCATCACCCTGGTCTTCCAGC...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCACCAATCTCCTCCTTaGAGTGCACGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALHQSPP*SARGPG
Trigger: GCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTGGTCACAAGGGGGATaGGCTCAGCGACACCAATCT +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPWSQGG*AQRHQS
Trigger: AGATTGGTGTCGCTGAGCTCATCCCCCTTGTGACCA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGGTCTACCGGGGTTaGGACCACAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWQVYRG*DHRLGE
Trigger: CTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTG...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GATGTTGTAATAGCTGAAGAGCGTCGGCCAGTGGCGGAAGGACAATTTCCTCCAACCTCCACGCTCAGGTaGCTCGCCTGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: DVVIAEERRPVAEGQFPPTSTLR*LAWRRL
Trigger: CAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGT...TGGAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTTCAGCTATTACAACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTAGACAACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRQHAASWGAAGFGRKTASLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...AGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCATGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGTGTCAATTAAGCAGGTaGGGTCAGGCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVCQLSR*GQAGPR
Trigger: TCGGGGACCAGCCTGACCTCACCTGCTTAATTGACA...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTTCCGCCCCACCACGATaGGGTTGCCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSRAATILLSKNTRAVMPSAPPR*GCPAAP
Trigger: TGGAGCTGCAGGGCAACCTCATCGTGGTGGGGCGGA...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACACAGAGCGGTAATGCCTaGGGAGACCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTQSGNA*GDLLAA
Trigger: AGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTG...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSNQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAAGTGGCCCTGAAGGGTaGAGAGGCAGCACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTSGPEG*RGSTSP
Trigger: AGGACTCGTGCTGCCTCTTCACCCTTCAGGGCCACT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGAGCAAACACATGGCTaGCCCGGCTGCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWEQTHG*PGCQSV
Trigger: TACTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHEWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSEWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ASGGRTISSKVPHPQAPRAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...CCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCACATACCACTCAGGCTaGTCAGTAGGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPTYHSG*SVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGTATGT...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCGCCAGGAGGTTCTTGTaGCAGGGAAACACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPARRFL*QGNTED
Trigger: GTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGC...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGCCAGGAGGTTCTTGTaGCAGGGAAACACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRARRFL*QGNTED
Trigger: GTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACATCTCCTCCTTGAAGTaGACGTGGACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHISSLK*TWTRLS
Trigger: GGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGAT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR GCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGGAAGGAAGACGGCTaGAACGTGATGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTARKEDG*NVMVWG
Trigger: ACCCCACACCATCACGTTGCAGCCGTCTTCCTTCCG...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTTGCGCAGCCCTGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGTCATGGACAACCTCTaGTGGACCTCCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VAQPCWVCVYQDANPDNGVMDNL*WTSTLR
Trigger: CCTGAGCGTGGAGGTCCAGCAGAGGTTGTCCATGAC...ACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAAAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACG +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKRQSPV*ASHTQT
Trigger: CGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCT...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACATCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTSWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHSWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTTCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCISWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIDDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPDDTQA*TTAQVL
Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCACAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTAGGGGCATCAGGTGGAACCCACTCAGGCTaGTCAGTAGGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGDSPGDVWFSGSLGASGGTHSG*SVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTTCC...ACCTGATGCCCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CCA 90 bp GCCTCAGGGGGCAGTCGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: ASGGSRLFRSASSIRRMSDHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...TGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGAGCTTCCTAAGGCCTaGCAGCAGGTCGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAELPKA*QQVGHL
Trigger: CAAGTGACCGACCTGCTGCCAGGCCTTAGGAAGCTC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGACCATCCTCTTCCTaGTGTAGAGGCTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHRPSSS*CRGSPR
Trigger: GCGGGGTGAGCCTCTACACCAGGAAGAGGATGGTCT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGGCTGCCCAGGAACTTaGCATGGTAGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVGCPGT*HGSAGR
Trigger: TCTTCCAGCACTACCATGCCAAGTTCCTGGGCAGCC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCICNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGCAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RLFRSASSIRRMSMDRTVQHAAS*GAAGFG
Trigger: TCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTG...CACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGTTGCGCAGCCCTGCTaGGTCTGTGTATACCAGGAT +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAVAQPC*VCVYQD
Trigger: ATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: RLFRSASSIRRMSMDRTVGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...CACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGCTCCCTCACCCAATaGGCTCTGTTCCGTCACCTG +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTGSLTQ*ALFRHL
Trigger: CAGGTGACGGAACAGAGCCCATTGGGTGAGGGAGCC...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTASPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTTCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCISPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGACTGGGCTGTCATaGACAACCTCTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIGTGLS*TTSAGP
Trigger: AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGCCCCCAGGTTACCTCTaGGACTGGGCTGTCATGGAC +
Preference number: 4 (lower is better)
Translates to: RLFRSASSIRRMSMDRTVPPGYL*DWAVMD
Trigger: GTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGG...CACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTAGACAACACGCAGCCTCTTGGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRQHAASWGAAGFGRKTAKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...AGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCTGCTGCTGTACACTaGAGAGGCAGGGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTAAAVH*RGRGTA
Trigger: GGCAGTTCCCCTGCCTCTCCAGTGTACAGCAGCAGC...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATCTCAGTGTGTGGTCTTaGCTCCCAGTCACCAAGCGC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHLSVWS*LPVTKR
Trigger: GCGCTTGGTGACTGGGAGCCAAGACCACACACTGAG...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCGCCAGCACCATGGTCTaGTCAATGTACACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFASTMV*SMYTVV
Trigger: CACGACCGTGTACATTGACCAGACCATGGTGCTGGC...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGCCAGCACCATGGTCTaGTCAATGTACACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVASTMV*SMYTVV
Trigger: CACGACCGTGTACATTGACCAGACCATGGTGCTGGC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: ASGGRTISSKVPHPQAPRHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...CCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACACCAGGTTCAGTGCATTaGCCCCCACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTPGSVH*PPHSTP
Trigger: TGGGGTGCTGTGTGGGGGCCAATGCACTGAACCTGG...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGATGACACAGGAGGTTCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AVPDADEVIQATADDTGGSGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...ACCTCCTGTGTCATCAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GTCGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGCCATCCCGGAAAGTaGCCATGGATCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VACSGLLAPSGECQWTGQCHPGK*PWITLA
Trigger: TGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCA...CTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACCCTTCACAGGGGTGGTaGATTCCACAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHPSQGW*IPQVLF
Trigger: GAACAGGACCTGTGGAATTCACCACCCCTGTGAAGG...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAACTCCTCCAAGCTCCTaGTCCCAGAGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPTPPSS*SQSCLS
Trigger: TGAGAGACAGCTCTGGGATCAGGAGCTTGGAGGAGT...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAACTCCTCCAAGCTCCTaGTCCCAGAGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTATPPSS*SQSCLS
Trigger: TGAGAGACAGCTCTGGGATCAGGAGCTTGGAGGAGT...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGGTGGATGGTCCCAATaGTGTCAGGATCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALAGGWSQ*CQDQHG
Trigger: TCCATGCTGATCCTGACATCATTGGGACCATCCACC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGGTGGATGGTCCCAATaGTGTCAGGATCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSGGWSQ*CQDQHG
Trigger: TCCATGCTGATCCTGACATCATTGGGACCATCCACC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGTGGTCACAAGGGGGATaGGCTCAGCGACACCAATCT +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQWSQGG*AQRHQS
Trigger: AGATTGGTGTCGCTGAGCTCATCCCCCTTGTGACCA...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GGAGGTGACATCCCCACGGTGAGCAAACACATGGCTGACCCGGCTGCCAGTCAGTGTAGGCAAACAAGATaGTGTAGGTGGTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: GGDIPTVSKHMADPAASQCRQTR*CRWSQG
Trigger: CCCTTGTGACCACCTACATCATCTTGTTTGCCTACA...CTGACTGGCAGCCGGGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTGTAGGCAAACAAGATaGTGTAGGTGGTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPCRQTR*CRWSQG
Trigger: CCCTTGTGACCACCTACATCATCTTGTTTGCCTACA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACATGGCCATGTTCTTCATaGTGGACCAGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTWPCSS*WTSSRC
Trigger: GCAGCGAGAGCTGGTCCATCATGAAGAACATGGCCA...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCATGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAGCCTTCCCACCATCTaGAAGTCGTTCCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALSLPTI*KSFPAL
Trigger: GAGAGCTGGGAACGACTTTCAGATGGTGGGAAGGCT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPNQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTANQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAATGGAGTAGAACTTaGTGCCTGTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALEWSRT*CLCCGP
Trigger: GGGACCGCAGCACAGGCATCAAGTTCTACTCCATTC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACGCAGGTTGTCTGAGATaGCACCCAAGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHAGCLR*HPSLHH
Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGC...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGCACATACACCAGGCTaGGCTCACTGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWAHTPG*AHCQSC
Trigger: GCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACAGTAGCCGAAGAGGATaGTGGGGATGGGATAGGATG +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHSSRRG*WGWDRM
Trigger: CATCCTATCCCATCCCCATCATCCTCTTCGGCTACT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545718.2
CDS-3UTR GCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTCACTGCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGGATGGGATAGGATaGACAGAGGAGCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: AHCQSCRQWQRCPAPGSGGDGIG*TEEPMV
Trigger: AACCATGGGCTCCTCTGTGCATCCTATCCCATCCCC...GCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAAGCAGGTCGGTCACTTaGAGACACAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSSRSVT*RHNSSK
Trigger: CTTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAGCAGGTCGGTCACTTaGAGACACAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALASRSVT*RHNSSK
Trigger: CTTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCT...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCAGGTCGGTCACTTaGAGACACAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPSRSVT*RHNSSK
Trigger: CTTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAGCAGCAGGCATCCATaGTCAGGGAGTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWSSRHP*SGSRFL
Trigger: CAGGAACCTACTCCCTGAGCATGGATGCCTGCTGCT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCAGGCATCCATaGTCAGGGAGTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHSSRHP*SGSRFL
Trigger: CAGGAACCTACTCCCTGAGCATGGATGCCTGCTGCT...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAGGGTTTTAGGCTCGTaGTGGTGGATGGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: AAGRYSALSPKSRFSALARVLGS*WWMVPM
Trigger: CATTGGGACCATCCACCAGCACGAGCCTAAAACCCT...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAAGTGTGGCTGAAGTCTaGAGGGTTTTAGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSSVAEV*RVLGSC
Trigger: GCACGAGCCTAAAACCCTGCAGACTTCAGCCACACT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGAGTGTGGCTGAAGTCTaGAGGGTTTTAGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRSVAEV*RVLGSC
Trigger: GCACGAGCCTAAAACCCTGCAGACTTCAGCCACACT...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAATCTCCGCCCGAAGGCTaGAGTTGGGGCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKSPPEG*SWGWGA
Trigger: TGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGA...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCATGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp ACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: TRMPIQTTVPAMMRRCARAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...CCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSADHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTATCTCCTCCACCAGTTaGAATGCCCGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGISSTS*NARDKG
Trigger: ACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGAT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCATCTCCTCCACCAGTTaGAATGCCCGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPISSTS*NARDKG
Trigger: ACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGAT...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACATCTCCTCCACCAGTTaGAATGCCCGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHISSTS*NARDKG
Trigger: ACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGAT...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGAGCTTCCTAAGGCCTaGCAGCAGGTCGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVELPKA*QQVGHL
Trigger: CAAGTGACCGACCTGCTGCCAGGCCTTAGGAAGCTC...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CCA 90 bp GACGGAACACTCTCAGTGTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGTTAGGCTCGTGCTGGTaGATGGTCCCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: DGTLSVCGLGSQSPSAQQLGSCW*MVPMMS
Trigger: TGACATCATTGGGACCATCCACCAGCACGAGCCTAA...CTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACACACTGAGAGTGTTCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGTTTTAGGCTCGTGCTaGTGGATGGTCCCAATGATG +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTVLGSC*WMVPMM
Trigger: CATCATTGGGACCATCCACCAGCACGAGCCTAAAAC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACGGCTGCCCAGGAACTTaGCATGGTAGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHGCPGT*HGSAGR
Trigger: TCTTCCAGCACTACCATGCCAAGTTCCTGGGCAGCC...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp CTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCTGTCGATCTTCCGCGTaGAGAAGTAGATGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: LGSFPQVQVQCIGPHTAPCRSSA*RSRCRQ
Trigger: TTGCCTACATCTACTTCTCCACGCGGAAGATCGACA...GGGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAAGAGACAGAACTCCTaGATGGCGGGCACTAGGGTG +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHKRQNS*MAGTRV
Trigger: CACCCTAGTGCCCGCCATCCAGGAGTTCTGTCTCTT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAACAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTCAGGTGAGGTCAGGCTaGTCCCCGAAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSRAATILLSKNTRAVMPQVRSG*SPKREG
Trigger: GCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTG...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGGCTGAGGGCAGTGTaGGTCTCCAAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALGLRAV*VSKEKK
Trigger: TTTCTTCTCCTTGGAGACCCACACTGCCCTCAGCCC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCCAGCACCATGGTCTaGTCAATGTACACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAASTMV*SMYTVV
Trigger: CACGACCGTGTACATTGACCAGACCATGGTGCTGGC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCAGCACCATGGTCTaGTCAATGTACACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIASTMV*SMYTVV
Trigger: CACGACCGTGTACATTGACCAGACCATGGTGCTGGC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGTCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PVAEGQFPPKFLILRPPGHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...ACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCATCTTGTCCTCCACTaGCCAGCACCATGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHHLVLH*PAPWSG
Trigger: ACCAGACCATGGTGCTGGCCAGTGGAGGACAAGATG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHSGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCATCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTASGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTTCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSGWKILGSFPQVQVQCISGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACTCAGGAGGCAGCGGCTaGAAGATACTCGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHSGGSG*KILGSF
Trigger: GAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGA...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACACCTTCACAGGGGTGGTaGATTCCACAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTPSQGW*IPQVLF
Trigger: GAACAGGACCTGTGGAATTCACCACCCCTGTGAAGG...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGCCCGGGACAAAGGTaGACGAAATACATCTACTGC +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSACPGQR*TKYIYC
Trigger: GCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAACTCCTCCAAGCTCCTaGTCCCAGAGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTTPPSS*SQSCLS
Trigger: TGAGAGACAGCTCTGGGATCAGGAGCTTGGAGGAGT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGGTGGATGGTCCCAATaGTGTCAGGATCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWGGWSQ*CQDQHG
Trigger: TCCATGCTGATCCTGACATCATTGGGACCATCCACC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTGTCTTTGAGTGTGGCTaGAGTCTGCAGGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVVFECG*SLQGFR
Trigger: CCTAAAACCCTGCAGACTTCAGCCACACTCAAAGAC...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACGTCTTTGAGTGTGGCTaGAGTCTGCAGGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHVFECG*SLQGFR
Trigger: CCTAAAACCCTGCAGACTTCAGCCACACTCAAAGAC...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAAATCAAGGGAACCGTTaGGCCGTGCAGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTNQGNR*AVQPQS
Trigger: GGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GCCTCAGGGGGCAGTCGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAACAAAGAACAACATGTaGAGGTACCTGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASGGSRLFRSASSIRRMSTKNNM*RYLWWQ
Trigger: CTGCCACCACAGGTACCTGCACATGTTGTTCTTTGT...TGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GCCATTGAGGGTGGGCGTCAGGCCGAAGAGTGTGCAGAGTCCCACAGACATGAGACAAAGAACAACATGTaGAGGTACCTGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AIEGGRQAEECAESHRHETKNNM*RYLWWQ
Trigger: CTGCCACCACAGGTACCTGCACATGTTGTTCTTTGT...CTCATGTCTGTGGGACTCTGCACACTCTTCGGCCTGACGCCCACCCTCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR GCA 90 bp GCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGATGACACAGGAGGTACATACCACTCAGGCTaGTCAGTAGGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AVPDADEVIQATADDTGGTYHSG*SVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGTATGT...ACCTCCTGTGTCATCAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAAGGGTTTTAGGCTCGTaGTGGTGGATGGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKRVLGS*WWMVPM
Trigger: CATTGGGACCATCCACCAGCACGAGCCTAAAACCCT...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAAGGGTTTTAGGCTCGTaGTGGTGGATGGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTARVLGS*WWMVPM
Trigger: CATTGGGACCATCCACCAGCACGAGCCTAAAACCCT...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAGTGTGGCTGAAGTCTaGAGGGTTTTAGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWSVAEV*RVLGSC
Trigger: GCACGAGCCTAAAACCCTGCAGACTTCAGCCACACT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTTGGACCAGCTCTCGCTaGTTAGGCCTTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LSRAATILLSKNTRAVMPWTSSR*LGLGRS
Trigger: GGATCGCCCAAGGCCTAAGCAGCGAGAGCTGGTCCA...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GAAGTAGCCGATGAGGATGATGCCCAGCTCCGTGGCCATGTTCTTCATGATGGATCCTGGTACACCCGCTaGACCAGGCAGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EVADEDDAQLRGHVLHDGSWYTR*TRQLKS
Trigger: TGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGA...TCCATCATGAAGAACATGGCCACGGAGCTGGGCATCATCCTCATCGGCTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR GCA 90 bp GGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GSVYTRMPIQTTVPAMMRTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...CCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACACAAGTCCAGGTTCAGTaGATTGGCCCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTQVQVQ*IGPHTA
Trigger: TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTG...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTADHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALDHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGAGGCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSVYTRMPIQTTVPAMMRHRSCS*QGEFQQ
Trigger: CTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTG...CCTCATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTTAGGCTCGTGCTGGTaGATGGTCCCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFLGSCW*MVPMMS
Trigger: TGACATCATTGGGACCATCCACCAGCACGAGCCTAA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGGTTTTAGGCTCGTGCTaGTGGATGGTCCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLVLGSC*WMVPMM
Trigger: CATCATTGGGACCATCCACCAGCACGAGCCTAAAAC...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CCA 90 bp GAAGTAGCCGATGAGGATGATGCCCAGCTCCGTGGCCATGTTCTTCATGATGGATCGCCTGGCGACGTCTaGTTCTCAGGTAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: EVADEDDAQLRGHVLHDGSPGDV*FSGSLG
Trigger: CCCTAAGCTACCTGAGAACCAGACGTCGCCAGGCGA...TCCATCATGAAGAACATGGCCACGGAGCTGGGCATCATCCTCATCGGCTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCTGTGATGGGTTTTTaGTGTGCACAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPAVMGF*CAQGTV
Trigger: CACAGTGCCCTGTGCACACCAAAAACCCATCACAGC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATAACACTCTCAGTGTGTaGTCTTGGCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHNTLSV*SWLPVT
Trigger: GGTGACTGGGAGCCAAGACCACACACTGAGAGTGTT...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTCACTGGCCAGCACCATaGTCTGGTCAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVHWPAP*SGQCTR
Trigger: CCGTGTACATTGACCAGACCATGGTGCTGGCCAGTG...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAAGGAGACACAGCCCTaGCCGCCAGTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKKETQP*PPVTSR
Trigger: CCTGCTGGTGACTGGCGGCCAGGGCTGTGTCTCCTT...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CTCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTATCTGGCGGGCAGGCTaGGCCTCACTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQGEEIKGTVEPCSHNPFIWRAG*ASLFFP
Trigger: GGGGAAGAACAGTGAGGCCCAGCCTGCCCGCCAGAT...AAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACATGTGCAGGTACCTaGGTGTTTCACACACATGTG +
Preference number: 4 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCTCAGT*VFHTHV
Trigger: CACATGTGTGTGAAACACCCAGGTACCTGCACATGT...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648151.1
CDS-3UTR TCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCCAGGGAAACACTaGGGACTTCACAAATATCTG +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSVPGKH*GLHKYL
Trigger: CAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCAC...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCCGGGACAAAGGTaGACGAAATACATCTACTGC +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHCPGQR*TKYIYC
Trigger: GCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCTGTAGGCAAACAAGATaGTGTAGGTGGTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRYSALSPKSRFSALAPCRQTR*CRWSQG
Trigger: CCCTTGTGACCACCTACATCATCTTGTTTGCCTACA...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFRPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVRPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: YSALSPKSRFSALAPTQHWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCGCTGCACCAGGCAGCTaGAGTCATAGCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVAAPGS*SHSLGS
Trigger: ACTCCCCAGGCTATGACTTCAGCTGCCTGGTGCAGC...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACAAAGAACAACATGTaGAGGTACCTGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSTKNNM*RYLWWQ
Trigger: CTGCCACCACAGGTACCTGCACATGTTGTTCTTTGT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGACAAAGAACAACATGTaGAGGTACCTGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: YSQEAAAGRYSALSPKSRTKNNM*RYLWWQ
Trigger: CTGCCACCACAGGTACCTGCACATGTTGTTCTTTGT...CCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACACATACCACTCAGGCTaGTCAGTAGGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHTYHSG*SVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGTATGT...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCACGAAATACATCTACTaGCAGGAGGTTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTTKYIY*QEVLVP
Trigger: TGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGT...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp TGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGTAGTTGCGCAGCCCTaGTGGGTCTGTGTATACCAG +
Preference number: 4 (lower is better)
Translates to: CWVCVYQDANPDNGASHDVVAQP*WVCVYQ
Trigger: CTGGTATACACAGACCCAGCAGGGCTGCGCAACTAC...ATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTTGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR GCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTGCAGGTACCTGTGGTaGCAGCACCTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKEKKSREPLSRAATILLCRYLW*QHLPSC
Trigger: GCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCA...CAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGATGACACAGGAGGTATGTCAGGATCAGCATaGAAGCGTTCCCAGTCATTC +
Preference number: 4 (lower is better)
Translates to: AVPDADEVIQATADDTGGMSGSA*KRSQSF
Trigger: GAATGACTGGGAACGCTTCCATGCTGATCCTGACAT...ACCTCCTGTGTCATCAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CCA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGTTTTAGGCTCGTGCTaGTGGATGGTCCCAATGATG +
Preference number: 4 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTAVLGSC*WMVPMM
Trigger: CATCATTGGGACCATCCACCAGCACGAGCCTAAAAC...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCATGTCGATCTTCCGCGTaGAGAAGTAGATGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSCRSSA*RSRCRQ
Trigger: TTGCCTACATCTACTTCTCCACGCGGAAGATCGACA...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTGCCAGCCATGATGGTTACCTCTGGGACTaGGCTGTCATGGACAACCTC +
Preference number: 4 (lower is better)
Translates to: CWVCVYQDANPDNGASHDGYLWD*AVMDNL
Trigger: GAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACC...ATCATGGCTGGCACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GAAGTAGCCGATGAGGATGATGCCCAGCTCCGTGGCCATGTTCTTCATGATGGAAAGAGCGTCGGCCAGTaGCGGAAGGACAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: EVADEDDAQLRGHVLHDGKSVGQ*RKDNFL
Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTT...TCCATCATGAAGAACATGGCCACGGAGCTGGGCATCATCCTCATCGGCTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CCA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCAAAGTTGCAGACAATaGCAGCGTTGTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHQSCRQ*QRCPAP
Trigger: TGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATGTGCCAGGGAAACACTaGGGACTTCACAAATATCTG +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHVPGKH*GLHKYL
Trigger: CAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCAC...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATGCCCGGGACAAAGGTaGACGAAATACATCTACTGC +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTCPGQR*TKYIYC
Trigger: GCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAACACCAATCTCCTCCTTaGAGTGCACGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKHQSPP*SARGPG
Trigger: GCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTG...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAATGGTCACAAGGGGGATaGGCTCAGCGACACCAATCT +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKWSQGG*AQRHQS
Trigger: AGATTGGTGTCGCTGAGCTCATCCCCCTTGTGACCA...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTGTAGGCAAACAAGATaGTGTAGGTGGTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGCRQTR*CRWSQG
Trigger: CCCTTGTGACCACCTACATCATCTTGTTTGCCTACA...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 4 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHRPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR TCA 90 bp GTTGCGCAGCCCTGCTGGGTCTGTGTATACCAGGATGCCAATCCAGACAACGGTAGACCACAGACTTGGTaGGCACCAACACATTCTCTA +
Preference number: 4 (lower is better)
Translates to: VAQPCWVCVYQDANPDNGRPQTW*APTHSL
Trigger: TAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCT...ACCGTTGTCTGGATTGGCATCCTGGTATACACAGACCCAGCAGGGCTGCGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR TCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCTGGACAGGACAGTGGTaGAAAACAGCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGWTGQW*KTASEG
Trigger: TCCTTCAGATGCTGTTTTTCACCACTGTCCTGTCCA...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR TCA 90 bp CTCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTGACATCCCCACGGTaGGCAAACACATGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LQGEEIKGTVEPCSHNPFVTSPR*ANTWLT
Trigger: GGTCAGCCATGTGTTTGCTCACCGTGGGGATGTCAC...AAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAGCTCCCAAAGTGCCTaGCAGATGATGATATGGTTT +
Preference number: 4 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGSSQSA*QMMIWF
Trigger: AAACCATATCATCATCTGTCAGGCACTTTGGGAGCT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265565.10
CDS-3UTR GCA 90 bp TCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTGCAGACACTGTGTATACCAGGATaGCAATCCAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: SSTEGTYTRLSSLPKLQTLCIPG*QSRQRC
Trigger: GCACCGTTGTCTGGATTGGCATCCTGGTATACACAG...TGTCTGCAACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR GCA 90 bp CTCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTAGACCTCCTCGCTGCTaGAGCACAGCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LQGEEIKGTVEPCSHNPFRPPRC*STAPLQ
Trigger: TTGAAGGGGTGCTGTGCTGCAGCAGCGAGGAGGTCT...AAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCAGGCCACTGTGTCGCTaGTGCTGTACACTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVRPLCR*CCTLER
Trigger: CCTCTCCAGTGTACAGCAGCAGCGACACAGTGGCCT...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAAGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKVRVHR*GRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGAC...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CCA 90 bp GCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGATGTCAGGATCAGCATaGAAGCGTTCCCAGTCATTC +
Preference number: 4 (lower is better)
Translates to: AAAGRYSALSPKSRFSALMSGSA*KRSQSF
Trigger: GAATGACTGGGAACGCTTCCATGCTGATCCTGACAT...CAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGATGTCAGGATCAGCATaGAAGCGTTCCCAGTCATTC +
Preference number: 4 (lower is better)
Translates to: RYSALSPKSRFSALAPTQMSGSA*KRSQSF
Trigger: GAATGACTGGGAACGCTTCCATGCTGATCCTGACAT...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACATTAGGCTCGTGCTGGTaGATGGTCCCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTLGSCW*MVPMMS
Trigger: TGACATCATTGGGACCATCCACCAGCACGAGCCTAA...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGTCGATCTTCCGCGTaGAGAAGTAGATGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHCRSSA*RSRCRQ
Trigger: TTGCCTACATCTACTTCTCCACGCGGAAGATCGACA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CCA 90 bp TCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAAGGAGACACAGCCCTGGCCGCTGTCGATCTTCCGCGTaGAGAAGTAGATGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: SVTGPRSLGPKRRHSPGRCRSSA*RSRCRQ
Trigger: TTGCCTACATCTACTTCTCCACGCGGAAGATCGACA...GCGGCCAGGGCTGTGTCTCCTTTTGGGACCTAAACTACGGGGACCTGTTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCTGCAACGTGATGGTGTaGGGTGTGGACGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVCNVMV*GVDGLT
Trigger: TGTGAGGCCGTCCACACCCCACACCATCACGTTGCA...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCACAAATAACAAGTCTTTaGGTGTGGCTGAAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EAAAGRYSALSPKSRFSAQITSL*VWLKSA
Trigger: TGCAGACTTCAGCCACACTCAAAGACTTGTTATTTG...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR TCA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGCAAATAACAAGTCTTTaGGTGTGGCTGAAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLQITSL*VWLKSA
Trigger: TGCAGACTTCAGCCACACTCAAAGACTTGTTATTTG...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR TCA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAAATAACAAGTCTTTaGGTGTGGCTGAAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVQITSL*VWLKSA
Trigger: TGCAGACTTCAGCCACACTCAAAGACTTGTTATTTG...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp CTCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGCCAGGAGGTTCTTGTaGCAGGGAAACACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LQGEEIKGTVEPCSHNPFARRFL*QGNTED
Trigger: GTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGC...AAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR GCA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATACGAAATACATCTACTaGCAGGAGGTTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHTKYIY*QEVLVP
Trigger: TGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGT...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAACGAAATACATCTACTaGCAGGAGGTTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRYSALSPKSRFSALAPTTKYIY*QEVLVP
Trigger: TGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGT...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR GCA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCACGATGAGGTTGCCCTaGAGCTCCAAGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVTMRLP*SSKLQM
Trigger: CATCTGGAGCTTGGAGCTGCAGGGCAACCTCATCGT...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR TCA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTGTTTCACACACATGTaGGATGAGTCATTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFCFTHM*DESFLN
Trigger: GTTCAAGAATGACTCATCTCACATGTGTGTGAAACA...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648151.1
CDS-3UTR GCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAGGAACCGTTGAGCCGTaGAGCCACAATCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKGTVEP*SHNPFV
Trigger: GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCC...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR GCA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTGCTCACTGCCAAAGTTaGAGACAATGGCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LSRAATILLSKNTRAVMPAHCQS*RQWQRC
Trigger: ACAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CCA 90 bp TGTTCTTCCCCAGGTAGACTGTCTGTAACAGGTCCCCGTAGTTTAGGTCCCAAAGACCATGGATCACCCTaGCACACACTTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: CSSPGRLSVTGPRSLGPKDHGSP*HTLDST
Trigger: AGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTC...TTTGGGACCTAAACTACGGGGACCTGTTACAGACAGTCTACCTGGGGAAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 72 bp GTGTGGGTCTCCAAGGAGAAGAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VWVSKEKKSREP*SRAATILLSKN
Trigger: GTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGAGACCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
3UTR CAA 72 bp TTCACCTCCAGGTCTACCGGGGTTGAGACCACAGACTaGGTGAGCACCAACACATTCTCTAACCCAATAACC +
Preference number: 4 (lower is better)
Translates to: FTSRSTGVETTD*VSTNTFSNPIT
Trigger: GGTTATTGGGTTAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAACCCCGGTAGACCTGGAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR GCA 90 bp ACCACAGACTTGGTGAGCACCAACACATTCTCTAACCCAATAACCACCACAAGGTGTGAGGACCGAGGCTaGGCTGAAAAGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TTDLVSTNTFSNPITTTRCEDRG*AEKLVS
Trigger: TGACACCAACTTTTCAGCGCAGCCTCGGTCCTCACA...CCTTGTGGTGGTTATTGGGTTAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS GCA 90 bp AAGAACAACATGTGCAGGTACCTGTGGTGGCAGCACCTCCCAAGCTaGGGCGGCGGCGGCGGCGGCGACGGGGGCGGCAGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: KNNMCRYLWWQHLPS*GGGGGGDGGGSRGG
Trigger: TCCGCCCCTGCTGCCGCCCCCGTCGCCGCCGCCGCCGCCGCCGCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCACATGTTGTTCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000428413.5
ENST00000441517.6
CDS GCA 90 bp CGCTGCCTGCCTGGGCGCGGAATGCGCGTTAGGCAATCCCCGGTCTaGGCGTCCCACACGCAGACGTGGCCTGCCAGGCAGCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: RCLPGRGMRVRQSPV*ASHTQTWPARQQLT
Trigger: GGTGAGCTGCTGCCTGGCAGGCCACGTCTGCGTGTGGGACGCGCAGACCGGGGATTGCCTAACGCGCATTCCGCGCCCAGGCAGGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp CTCAAGCCCGCTGCCCACGCCACTGTCCCGGCGCTGCCCTGGGCGCGGAATGCGAAAATCTCGCCGCCATaGAGGGTGGGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LKPAAHATVPALPWARNAKISPP*RVGVRP
Trigger: CGGCCTGACGCCCACCCTCAATGGCGGCGAGATTTT...CGCATTCCGCGCCCAGGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS CCA 90 bp AGTGCACGTGGACCAGGCTCTCCGCCCGAAGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGCGGGCACGCAGGCTGCCCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SARGPGSPPEGCSWG*GAEASGGHAGCPGT
Trigger: GGTTCCTGGGCAGCCTGCGTGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGTGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS GCA 90 bp ACGTGGACCAGGCTCTCCGCCCGAAGGCTGCAGTTGGGGCTGGGGTaGAGAAGCATCAGGCGGGCACGCAGGCTGCCCAGGAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: TWTRLSARRLQLGLG*RSIRRARRLPRNLA
Trigger: TGCCAAGTTCCTGGGCAGCCTGCGTGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000494938.2
ENST00000648151.1
CDS GCA 90 bp CACCATCTGAAAGTCGTTCCCAGCTCTCCTGAGCCTCAAGCCCGCTaGCCACGCCACTGTCCCGGCGCTGCCTGCCTGGGCGCGGAATGC +
Preference number: 5 (lower is better)
Translates to: HHLKVVPSSPEPQAR*PRHCPGAACLGAEC
Trigger: GCATTCCGCGCCCAGGCAGGCAGCGCCGGGACAGTGGCGTGGGCAGCGGGCTTGAGGCTCAGGAGAGCTGGGAACGACTTTCAGATGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS CCA 90 bp AGTGCACGTGGACCAGGCTCTCCGCCCGAAGGCTGCAGTTGGGGCTaGGGTGCAGAAGCATCAGGCGGGCACGCAGGCTGCCCAGGAACT +
Preference number: 5 (lower is better)
Translates to: SARGPGSPPEGCSWG*GAEASGGHAGCPGT
Trigger: AGTTCCTGGGCAGCCTGCGTGCCCGCCTGATGCTTCTGCACCCCAGCCCCAACTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000494938.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATAACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: GRQPLLLVHPLHQAAEVITPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...TATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AGAGCCTCCCTCGGGTTCAGGCGGAGCGTGACTGGGATGACGGGCAGCAGGCTGCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RASLGFRRSVTGMTGSRLPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...CAGCCTGCTGCCCGTCATCCCAGTCACGCTCCGCCTGAACCCGAGGGAGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GGCACTGCGGCCGTCCTGAGGGTGCCGGCCCTCCAGAGCCTCCCTCGGGTTCAGTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: GTAAVLRVPALQSLPRVQSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...CTGAACCCGAGGGAGGCTCTGGAGGGCCGGCACCCTCAGGACGGCCGCAGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCCCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: VPGGCGPGSRQHAASWGAPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...GGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTAGGGCCAGCCCCCACTaGGACTTGACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAARASPH*DLTMSI
Trigger: GATCGACATGGTCAAGTCCAAGTGGGGGCTGGCCCT...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LDLHAQVTRLATSGSQVAAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp TGCAGCTCCAAGCTCCAGATGGAACCCTCGGCACTGGGGGCCCAGGCGAGGGAATCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSSKLQMEPSALGAQARESGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...TTCCCTCGCCTGGGCCCCCAGTGCCGAGGGTTCCATCTGGAGCTTGGAGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LDLHAQVTRLATSGSQVAPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GGCCCAGGCGAGGGAAGGGGAGCCTTTCTCGGGGGAGCCACCCTCGTCCTCAGGAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: GPGEGRGAFLGGATLVLRKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...CCTGAGGACGAGGGTGGCTCCCCCGAGAAAGGCTCCCCTTCCCTCGCCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS CCA 90 bp CTGGCAGACCCCTGCCTCAGCCAGTCTCCACCCAACGCTCTGTGCTaGCCTCAGGAACATGACGAGTACCCACCCACTCAGGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LADPCLSQSPPNALC*PQEHDEYPPTQAAQ
Trigger: CTGAGCAGCCTGAGTGGGTGGGTACTCGTCATGTTCCTGAGGCCAGCACAGAGCGTTGGGTGGAGACTGGCTGAGGCAGGGGTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420588.5
ENST00000485967.1
CDS-3UTR CAA 90 bp GACAACGGTGCCAGCCATGATGAGGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: DNGASHDEALCQAGAGQEVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...TTCCTGGCCCGCACCCGCCTGGCACAGCGCCTCATCATGGCTGGCACCGTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCCGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: VPGGCGPGSRQHAASWGAVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...GGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp TGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: WCGVWTASQPAAARSALALSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...AGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CAGGCAGCTGAAGTCATAGCCTGGGGAGTCCCGAGAGCGGCCACAGACCGCCCGACACCAATCTCCTCCTaGAAGTGCACGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: QAAEVIAWGVPRAATDRPTPISS*KCTWTR
Trigger: CCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGT...CGGGCGGTCTGTGGCCGCTCTCGGGACTCCCCAGGCTATGACTTCAGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AAGCAGGTGAGGTCAGGCTGGTCCCCGAAGAGGGAAGGCGGCGGAGGGCCCCGGGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 5 (lower is better)
Translates to: KQVRSGWSPKREGGGGPRVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...CCGGGGCCCTCCGCCGCCTTCCCTCTTCGGGGACCAGCCTGACCTCACCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CCGTCACCTGGGCAGCGAGGTAGTTGCGCAGCCCTGCTGGGTCTGTGTATACCAACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: PSPGQRGSCAALLGLCIPTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...TGGTATACACAGACCCAGCAGGGCTGCGCAACTACCTCGCTGCCCAGGTGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVTPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFTPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: AGRYSALSPKSRFSALAPTPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGEQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS GCA 90 bp GTCACAAGGGGGATGAGCTCAGCGACACCAATCTCCTCCTTGAAGTaGACGTGGACCAGGCTCTCCGCCCGAAGGCTGCAGTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VTRGMSSATPISSLK*TWTRLSARRLQLGL
Trigger: CAGCCCCAACTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGTCGCTGAGCTCATCCCCCTTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000494938.2
ENST00000648151.1
CDS GCA 90 bp TCACTGGCAGACCCCTGCCTCAGCCAGTCTCCACCCAACGCTCTGTaGTGGCCTCAGGAACATGACGAGTACCCACCCACTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLADPCLSQSPPNAL*WPQEHDEYPPTQAA
Trigger: AGCAGCCTGAGTGGGTGGGTACTCGTCATGTTCCTGAGGCCAGCACAGAGCGTTGGGTGGAGACTGGCTGAGGCAGGGGTCTGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420588.5
ENST00000485967.1
CDS GCA 90 bp CCTGCAGAGGGCAGCAACAGGGCACAGGGCAACACATGGCCACTCTaGGACATGACTCACACAACCTCATGGGCCTCGGAGTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: PAEGSNRAQGNTWPL*DMTHTTSWASEWQR
Trigger: CCTCTGCCACTCCGAGGCCCATGAGGTTGTGTGAGTCATGTCGCAGAGTGGCCATGTGTTGCCCTGTGCCCTGTTGCTGCCCTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468965.2
CDS-3UTR CAA 90 bp CGTGATGGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTCACCCTGGCACACACTaGACAGCACTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: RDGVGCGRPHSQLPLVARHPGTH*TALTKN
Trigger: GTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTG...ACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACCATCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGGAGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LCQAGAGQEVDNTQPLGELSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...CTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACAGCCCCCACTTGGACTaGACCATGTCGATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHSPHLD*TMSIFR
Trigger: GCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGCT...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGCCGCTCGTAGCGCGTaGGCTGTCCCACTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIAARSA*AVPLAW
Trigger: CCAAGCCAGTGGGACAGCCAACGCGCTACGAGCGGC...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GCCTCAGGGGGCAGTCGCTTGTTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: ASGGSRLFRSASSIRRMSTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...TGACATTCGCCGGATGGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHTPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTACCCCACCTGGGCCCTaGGGTCCTGCTTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: GSGWKILGSFPQVQVQCITPPGP*GPASQC
Trigger: GCACTGGGAAGCAGGACCCAAGGGCCCAGGTGGGGT...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: YSALSPKSRFSALAPTQHPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGTGTGGGGTGTGGACGGCCTCACAGCCAGCTGCCGCTCGTAGCGCGTTGGCTGGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GVGCGRPHSQLPLVARWLGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...CAGCCAACGCGCTACGAGCGGCAGCTGGCTGTGAGGCCGTCCACACCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCGCTGTGCCAGGCGGGTGCGGGCCAGGAAGTAGACAACACGCAGCCTCTTGGGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GAVPGGCGPGSRQHAASWAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...CCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCGCACCCGCCTGGCACAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCGCTGCTGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: AAAQHPFNGVPHLQPAAAAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...AGCAGCGGCCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CAGCACCAAGACGATGCCGGTGGCCAGGCCCAGCGCCGCCACCTTGTACAGCGTAGCTCACTGCCAAAGTaGCAGACAATGGCAGCGTTG +
Preference number: 5 (lower is better)
Translates to: QHQDDAGGQAQRRHLVQRSSLPK*QTMAAL
Trigger: CAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...ACGCTGTACAAGGTGGCGGCGCTGGGCCTGGCCACCGGCATCGTCTTGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp CTGGACCTCCACGCTCAGGTGACTCGCCTGGCGACGTCTGGTTCTCAGGTAGCTTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: LDLHAQVTRLATSGSQVASAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...AGCTACCTGAGAACCAGACGTCGCCAGGCGAGTCACCTGAGCGTGGAGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACTGTGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: QWQRCPAPGSGGQAGPHCVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...ACAGTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GTGTGGTCTTGGCTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: VWSWLPVTKRPAAAFRAVVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...CACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAGCCAAGACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAAAATCTCGCCGCCATaGAGGGTGGGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSKISPP*RVGVRP
Trigger: CGGCCTGACGCCCACCCTCAATGGCGGCGAGATTTT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GTCAGACACCAGCCCCACGACAGCAAAGAGACAGAACTCCTGGATGGCGGGCACTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VRHQPHDSKETELLDGGHSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...GTGCCCGCCATCCAGGAGTTCTGTCTCTTTGCTGTCGTGGGGCTGGTGTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416208.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGCCCAGCGCCGCCACCTaGTACAGCGTGACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQPSAAT*YSVTSP
Trigger: TGGAGACGTCACGCTGTACAAGGTGGCGGCGCTGGG...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCACCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCCCCCAGGTTACCTCTGGGACTGGGCTGTCATGGACAACCTCTGCTGGACCTCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: GPQVTSGTGLSWTTSAGPQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...AGGTCCAGCAGAGGTTGTCCATGACAGCCCAGTCCCAGAGGTAACCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS TCA 90 bp CCTCAGCCAGTCTCCACCCAACGCTCTGTGCTGGCCTCAGGAACATaGCGAGTACCCACCCACTCAGGCTGCTCAGTAGGCTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: PQPVSTQRSVLASGT*RVPTHSGCSVGSPC
Trigger: ACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTGGGTACTCGTCATGTTCCTGAGGCCAGCACAGAGCGTTGGGTGGAGACTGGCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420588.5
ENST00000485967.1
CDS-3UTR CAA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCSAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GTCCAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAAAAATCTCGCCGCCATaGAGGGTGGGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VQLLQHRGHIHQAELTAKKISPP*RVGVRP
Trigger: CGGCCTGACGCCCACCCTCAATGGCGGCGAGATTTT...TTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTGGAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGAAAATCTCGCCGCCATaGAGGGTGGGCGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQKISPP*RVGVRP
Trigger: CGGCCTGACGCCCACCCTCAATGGCGGCGAGATTTT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCCGCCAGCCCCTCCTCCTGGTACACCCGCTGCACCAGGCAGCTGAAGTCATAGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 5 (lower is better)
Translates to: GRQPLLLVHPLHQAAEVIVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...TATGACTTCAGCTGCCTGGTGCAGCGGGTGTACCAGGAGGAGGGGCTGGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGRYSALSPKSRFSALAPSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGACAACACGCAGCCTCTaGGGGAGCCGCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWTTRSL*GSRRFR
Trigger: CCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGT...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: GSGWKILGSFPQVQVQCIPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTGGGCCTCACGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: RQWQRCPAPGSGGQAGPHAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...GTGAGGCCCAGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GCCAGCACCATGGTCTGGTCAATGTACACGGTCGTGATGGCCCCTGAGTGGCCCGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: ASTMVWSMYTVVMAPEWPGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...GGGCCACTCAGGGGCCATCACGACCGTGTACATTGACCAGACCATGGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CTCCCAGTCACCAAGCGCCCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: LPVTKRPAAAFRAVMGFWSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...CCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGGGCGCTTGGTGACTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CCAGCAGCGGCTTTCAGGGCTGTGATGGGTTTTTGGTGTGCACAGGGCACTGTGTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PAAAFRAVMGFWCAQGTVSAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...CACAGTGCCCTGTGCACACCAAAAACCCATCACAGCCCTGAAAGCCGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQASAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: EAAAGRYSALSPKSRFSASAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...TGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCAGCCCCCACTTGGACTaGACCATGTCGATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPSPHLD*TMSIFR
Trigger: GCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGCT...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGGGCCAGCCCCCACTaGGACTTGACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGRASPH*DLTMSI
Trigger: GATCGACATGGTCAAGTCCAAGTGGGGGCTGGCCCT...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAAGGGCCAGCCCCCACTaGGACTTGACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTARASPH*DLTMSI
Trigger: GATCGACATGGTCAAGTCCAAGTGGGGGCTGGCCCT...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GCCAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: AKVADNGSVVQHQDLAGRGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...CCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: QSGGSGWKILGSFPQVQVSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...AACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: YSALSPKSRFSALAPTQHQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...GTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS CCA 90 bp AGGCTGCTCAGTAGGCTCTCCTTGTTTGCGGTCAGAGTCCACAGGTaGGGGCGAGTAATCCTTCACAGGGGTGGTGAATTCCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLLSRLSLFAVRVHR*GRVILHRGGEFHRS
Trigger: GGACCTGTGGAATTCACCACCCCTGTGAAGGATTACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000648151.1
CDS-3UTR CAA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCCACCCTGGCACACACTaGACAGCACTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTHPGTH*TALTKN
Trigger: GTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTG...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACATCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GRYSALSPKSRFSALAPTSAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHSAEVT*LPSRKV
Trigger: CACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGA...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFLSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVLSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAACTGCCAGGAGGTTCTaGTGCCAGGGAAACACTGAG +
Preference number: 5 (lower is better)
Translates to: VRRQRLEDTRLFPPSPGSTARRF*CQGNTE
Trigger: CTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGT...TGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTACTGCCAGGAGGTTCTaGTGCCAGGGAAACACTGAG +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGTARRF*CQGNTE
Trigger: CTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCAGCAGGTCGGTCACTaGCAGACACAACTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPQQVGH*QTQLLQ
Trigger: TTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCTG...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp TTGATGCCTGTGCTGCGGTCCCAGATGCTGATGAGGTCATCCAGGCCACTGCTGCAGCAGGTCGGTCACTaGCAGACACAACTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LMPVLRSQMLMRSSRPLLQQVGH*QTQLLQ
Trigger: TTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCTG...CAGCAGTGGCCTGGATGACCTCATCAGCATCTGGGACCGCAGCACAGGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CAA 90 bp TCCTCGCTGCTGCAGCACAGCACCCCTTCAATGGCGTCCCACACCTCCAGCCGGCCAAATAACAAGTCTTaGAGTGTGGCTGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSLLQHSTPSMASHTSSRPNNKS*SVAEVC
Trigger: GCAGACTTCAGCCACACTCAAAGACTTGTTATTTGG...CCGGCTGGAGGTGTGGGACGCCATTGAAGGGGTGCTGTGCTGCAGCAGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTACACCAATCTCCTCCTaGAAGTGCACGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGTPISS*KCTWTR
Trigger: CCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp CAAAGTTGCAGACAATGGCAGCGTTGTCCAGCACCAGGATCTGGCGGGCAGGCTACACCAATCTCCTCCTaGAAGTGCACGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: QSCRQWQRCPAPGSGGQATPISS*KCTWTR
Trigger: CCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGT...AGCCTGCCCGCCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTGCAACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACCAATCTCCTCCTaGAAGTGCACGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: AGRYSALSPKSRFSALAPTPISS*KCTWTR
Trigger: CCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGT...GGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp ACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACCGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: TRLFPPSPGSVHWPPHSTAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...GGTGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: GGSGWKILGSFPQVQVQCKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...GCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTCTCAGTGTGTGGTCTaGGCTCCCAGTCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: RQRLEDTRLFPPSPGSVHSQCVV*APSHQA
Trigger: CGCTTGGTGACTGGGAGCCAAGACCACACACTGAGA...ATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCAGACAATGGCAGCGTaGTCCAGCACCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: QRLEDTRLFPPSPGSVHWQTMAA*SSTRIW
Trigger: CCAGATCCTGGTGCTGGACAACGCTGCCATTGTCTG...CCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS GCA 90 bp AGTAGGTTCCTGAGCTTCCTAAGGCCTGGCAGCAGGTCGGTCACTTaGAGACACAACTCCTCCAAGCTCCTGATCCCAGAGCTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SRFLSFLRPGSRSVT*RHNSSKLLIPELSL
Trigger: GAGAGACAGCTCTGGGATCAGGAGCTTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCTGCCAGGCCTTAGGAAGCTCAGGAACCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS GCA 90 bp GTCCCAATGATGTCAGGATCAGCATGGAAGCGTTCCCAGTCATTCTaGCAGAAGTTCCCAGGGGACAGCAGCAGGCATCCATGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VPMMSGSAWKRSQSF*QKFPGDSSRHPCSG
Trigger: CCCTGAGCATGGATGCCTGCTGCTGTCCCCTGGGAACTTCTGGCAGAATGACTGGGAACGCTTCCATGCTGATCCTGACATCATTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp AAGAACACCAGAGCGGTAATGCCTGAGGAGACCTCCTCGCTGCTGCAGCACAGCCACCCTGGCACACACTaGACAGCACTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KNTRAVMPEETSSLLQHSHPGTH*TALTKN
Trigger: GTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTG...GCTGTGCTGCAGCAGCGAGGAGGTCTCCTCAGGCATTACCGCTCTGGTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: GRYSALSPKSRFSALAPTVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGTAGGCTCTCCTTGTTaGCGGTCAGAGTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: RYSALSPKSRFSALAPTQVGSPC*RSESTG
Trigger: ACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTAC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp ATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCACTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ILGSFPQVQVQCIGPHTALSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...TGCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQLSRLS*FAVRVH
Trigger: GTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAG...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAACTGCCAGGAGGTTCTaGTGCCAGGGAAACACTGAG +
Preference number: 5 (lower is better)
Translates to: GRYSALSPKSRFSALAPTTARRF*CQGNTE
Trigger: CTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGT...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp CTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCAGGTCGGTCACTaGCAGACACAACTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LEDTRLFPPSPGSVHWPPQQVGH*QTQLLQ
Trigger: TTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCTG...TGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAAGCCCCCACTTGGACTaGACCATGTCGATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTSPHLD*TMSIFR
Trigger: GCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGCT...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp GATGTTGTAATAGCTGAAGAGCGTCGGCCAGTGGCGGAAGGACAATTTCCTCCACCCACCACGATGAGGTaGCCCTGCAGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: DVVIAEERRPVAEGQFPPPTTMR*PCSSKL
Trigger: GAGCTTGGAGCTGCAGGGCAACCTCATCGTGGTGGG...TGGAGGAAATTGTCCTTCCGCCACTGGCCGACGCTCTTCAGCTATTACAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: AAGRYSALSPKSRFSALAAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: AAGRYSALSPKSRFSALAKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...GGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp ACCAGCAGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: TSRLSEMTPKLAPQPRSCKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...GCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGACAACCTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp ACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: TVRRQRLEDTRLFPPSPGKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...ACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: RYSALSPKSRFSALAPTQGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGTGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PVAEGQFPPKFLILRPPGGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...ACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp AGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCGGCTGTGATGGGTTTTaGGTGTGCACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SGWKILGSFPQVQVQCIGGCDGF*VCTGHC
Trigger: ACAGTGCCCTGTGCACACCAAAAACCCATCACAGCC...GCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGCAGCTCACTGCCAAAGTaGCAGACAATGGCAGCGTTG +
Preference number: 5 (lower is better)
Translates to: DTRLFPPSPGSVHWPPHSSSLPK*QTMAAL
Trigger: CAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...GCTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS CCA 90 bp CCAGAGCTGTCTCTCAGCACGTGGTTCCGGATCTCCTCCACCAGTTaGAATGCCCGGGACAAAGGTGAACGAAATACATCTACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PELSLSTWFRISSTS*NARDKGERNTSTAR
Trigger: CCTGGCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGATCCGGAACCACGTGCTGAGAGACAGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000487942.1
ENST00000648151.1
CDS CCA 90 bp TTAGGCTCGTGCTGGTGGATGGTCCCAATGATGTCAGGATCAGCATaGAAGCGTTCCCAGTCATTCTGCCAGAAGTTCCCAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: LGSCWWMVPMMSGSA*KRSQSFCQKFPGDS
Trigger: GCTGTCCCCTGGGAACTTCTGGCAGAATGACTGGGAACGCTTCCATGCTGATCCTGACATCATTGGGACCATCCACCAGCACGAGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp TTCAGGTCTGCTAGCTCCATCCGGCGAATGTCAATGGACAGGACAGTGGTGAAAAGGGCCAGCCCCCACTaGGACTTGACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: FRSASSIRRMSMDRTVVKRASPH*DLTMSI
Trigger: GATCGACATGGTCAAGTCCAAGTGGGGGCTGGCCCT...TTTCACCACTGTCCTGTCCATTGACATTCGCCGGATGGAGCTAGCAGACCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS-3UTR CAA 90 bp GGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 5 (lower is better)
Translates to: GWKILGSFPQVQVQCIGPVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...GGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp TTGAGCCGTGCAGCCACAATCCTTTTGTCCAAGAACACCAGAGCGGTAATGCCTTCAGGGGGCAGTCGCTaGTTCAGGTCTGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSRAATILLSKNTRAVMPSGGSR*FRSASS
Trigger: GGAGCTAGCAGACCTGAACAAGCGACTGCCCCCTGA...AGGCATTACCGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGCACGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RRQRLEDTRLFPPSPGSVGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...CACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGCAGCCACAATCCTTTaGTCCAAGAACACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQAATIL*SKNTRA
Trigger: CGCTCTGGTGTTCTTGGACAAAAGGATTGTGGCTGC...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAAATCAAGGGAACCGTaGAGCCGTGCAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHKSREP*SRAATI
Trigger: GATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGCTCACTGCCAAAGTaGCAGACAATGGCAGCGTTG +
Preference number: 5 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHSSLPK*QTMAAL
Trigger: CAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TTACAGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGAGCTCACTGCCAAAGTaGCAGACAATGGCAGCGTTG +
Preference number: 5 (lower is better)
Translates to: LQSGGSGWKILGSFPQVQSSLPK*QTMAAL
Trigger: CAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...CTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAGCTTCTCCAGCACAGAGGGCACATACACCAGGCTGAGCTCACTGCCAAAGTTCACCCTGGCACACACTaGACAGCACTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: QLLQHRGHIHQAELTAKVHPGTH*TALTKN
Trigger: GTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTG...AACTTTGGCAGTGAGCTCAGCCTGGTGTATGTGCCCTCTGTGCTGGAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp GGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACAGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 5 (lower is better)
Translates to: GRYSALSPKSRFSALAPTVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...TGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000648151.1
CDS-3UTR CAA 90 bp CCAGTGGCGGAAGGACAATTTCCTCCAAAGTTCCTCATCCTCAGGCCCCCAGGTGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PVAEGQFPPKFLILRPPGGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...ACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAATTGTCCTTCCGCCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320017.10
ENST00000441517.6
CDS-3UTR CAA 90 bp AGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RYSALSPKSRFSALAPTQGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...CTGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp GAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: EDTRLFPPSPGSVHWPPHGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...GTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS TCA 90 bp GTGGTTCCGGATCTCCTCCACCAGTTGGAATGCCCGGGACAAAGGTaGACGAAATACATCTACTGCCAGGAGGTTCTTGTGCCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: VVPDLLHQLECPGQR*TKYIYCQEVLVPGK
Trigger: TTTCCCTGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGATCCGGAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS GCA 90 bp GCAAACTTCTCTGGGAGTTCCAGAAAGTGCAGATCTAGTCACCAATaGAAGGCAGAAATTAGAGGTGGCCCTTCTGACCGCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ANFSGSSRKCRSSHQ*KAEIRGGPSDRTSP
Trigger: GGGGCTGGTGCGGTCAGAAGGGCCACCTCTAATTTCTGCCTTGCATTGGTGACTAGATCTGCACTTTCTGGAACTCCCAGAGAAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448217.2
CDS-3UTR CAA 90 bp AGTCAGGAGGCAGCGGCTGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCCCAAATAACAAGTCTTaGAGTGTGGCTGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SQEAAAGRYSALSPKSRFPNNKS*SVAEVC
Trigger: GCAGACTTCAGCCACACTCAAAGACTTGTTATTTGG...GAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGCTGCCTCCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS-3UTR CAA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCAGCCCCCACTTGGACTaGACCATGTCGATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVSPHLD*TMSIFR
Trigger: GCGGAAGATCGACATGGTCAAGTCCAAGTGGGGGCT...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp AAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACACAGGCTGCGCTGAAAAGTaGGTGTCAATTAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KILGSFPQVQVQCIGPHTGCAEK*VSIKQV
Trigger: CACCTGCTTAATTGACACCAACTTTTCAGCGCAGCC...TGTGTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
ENST00000545718.2
ENST00000648151.1
CDS CCA 90 bp CGAAGTCACCTTGCTGCCATCCCGGAAAGTGACCATGGATCACCCTaGCACACACTTGACAGCACTGACAAAGAACAACATGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: RSHLAAIPESDHGSP*HTLDSTDKEQHVQV
Trigger: TACCTGCACATGTTGTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCAGCAAGGTGACTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000545718.2
ENST00000648151.1
CDS-3UTR CAA 90 bp TGGAAGATACTCGGCTCTTTCCCCCAAGTCCAGGTTCAGTGCATTGGCCCCCACCCAAATAACAAGTCTTaGAGTGTGGCTGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: WKILGSFPQVQVQCIGPHPNNKS*SVAEVC
Trigger: GCAGACTTCAGCCACACTCAAAGACTTGTTATTTGG...GTGGGGGCCAATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS TCA 90 bp ACGAAATACATCTACTGCCAGGAGGTTCTTGTGCCAGGGAAACACTaGGGACTTCACAAATATCTGCTGGACATAAGCCACCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: TKYIYCQEVLVPGKH*GLHKYLLDISHRGT
Trigger: GGTGCCCCGGTGGCTTATGTCCAGCAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS-3UTR CAA 90 bp CAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGTCCACCCTGGCACACACTaGACAGCACTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: QGEEIKGTVEPCSHNPFVHPGTH*TALTKN
Trigger: GTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTG...GACAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS-3UTR CAA 90 bp TCCAAGGAGAAGAAATCAAGGGAACCGTTGAGCCGTGCAGCCACAATCCTTTTGAGCTCACTGCCAAAGTaGCAGACAATGGCAGCGTTG +
Preference number: 5 (lower is better)
Translates to: SKEKKSREPLSRAATILLSSLPK*QTMAAL
Trigger: CAACGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...CAAAAGGATTGTGGCTGCACGGCTCAACGGTTCCCTTGATTTCTTCTCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320017.10
ENST00000428413.5
ENST00000441517.6
CDS CCA 90 bp AGGTACCTGGTAAGAAGGGAGAAAAGCCAGTTAACAAAGAGTACTTaGCTCTGCACACTAGGGCTGCTGGAGGGAGGCGATAGTTATGTG +
Preference number: 5 (lower is better)
Translates to: RYLVRREKSQLTKST*LCTLGLLEGGDSYV
Trigger: CACATAACTATCGCCTCCCTCCAGCAGCCCTAGTGTGCAGAGCCAAGTACTCTTTGTTAACTGGCTTTTCTCCCTTCTTACCAGGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495603.2
CDS CCA 90 bp GAAACTCCCTCCGCTTATGAGATAAAAGAACTGGCTGAAATAAGCTaGAACCAAGATGGCCGACTGGAGTTGTGCAGAATGAGCTTGCCG +
Preference number: 5 (lower is better)
Translates to: ETPSAYEIKELAEIS*NQDGRLELCRMSLP
Trigger: CGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGCTTATTTCAGCCAGTTCTTTTATCTCATAAGCGGAGGGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS-3UTR CAA 90 bp ACCACAGACTTGGTGAGCACCAACACATTCTCTAACCCAATAACCACCACAAGGGTTGAGACCACAGACTaGGTGAGCACCAACACATTC +
Preference number: 5 (lower is better)
Translates to: TTDLVSTNTFSNPITTTRVETTD*VSTNTF
Trigger: GAATGTGTTGGTGCTCACCAAGTCTGTGGTCTCAAC...CCTTGTGGTGGTTATTGGGTTAGAGAATGTGTTGGTGCTCACCAAGTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS TCA 90 bp ACACTGATAAAGCTGTTAAAGTACATGAATTCACAAATCAGAAGCTaGCCAACCTCAATCTCACTGGCAGACCCCTGCCTCAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: TLIKLLKYMNSQIRS*PTSISLADPCLSQS
Trigger: AGACTGGCTGAGGCAGGGGTCTGCCAGTGAGATTGAGGTTGGTCAGCTTCTGATTTGTGAATTCATGTACTTTAACAGCTTTATCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485967.1
CDS TCA 90 bp AGAACAACATGTGCAGGTACCTGGGTGTTTCACACACATGTGAGATaGGTCATTCTTGAACCTTGTTATGATGTCAGCACTACCCATCTA +
Preference number: 5 (lower is better)
Translates to: RTTCAGTWVFHTHVR*VILEPCYDVSTTHL
Trigger: TAGATGGGTAGTGCTGACATCATAACAAGGTTCAAGAATGACTCATCTCACATGTGTGTGAAACACCCAGGTACCTGCACATGTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648151.1
CDS CCA 90 bp ACAGGAAGAAGAAAGACGGTCCAATTCAAGGGATTTAATGGGCATTaGAAACCGTGCCCCACAGAGTTAAAGAAACCAATGACTAATACA +
Preference number: 5 (lower is better)
Translates to: TGRRKTVQFKGFNGH*KPCPTELKKPMTNT
Trigger: TGTATTAGTCATTGGTTTCTTTAACTCTGTGGGGCACGGTTTCCAATGCCCATTAAATCCCTTGAATTGGACCGTCTTTCTTCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS GCA 72 bp ATGTGCAGGTACCTGTGGTGGCAGCACCTCCCAAGCTaGGGCGGCGGCGGCGGCGGCGACGGGGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: MCRYLWWQHLPS*GGGGGGDGGGS
Trigger: GCTGCCGCCCCCGTCGCCGCCGCCGCCGCCGCCGCAGCTTGGGAGGTGCTGCCACCACAGGTACCTGCACAT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000428413.5
ENST00000441517.6
CDS CAA 90 bp GCCCACCCTGTGGCCCAGTGGAGCCTGCTAGGGACCTACCCGCCATaGAGGGTGGGCGTCAGGCCGAAGAGTGTGCAGAGTCCCACAGAC +
Preference number: 6 (lower is better)
Translates to: AHPVAQWSLLGTYPP*RVGVRPKSVQSPTD
Trigger: GTCTGTGGGACTCTGCACACTCTTCGGCCTGACGCCCACCCTCAATGGCGGGTAGGTCCCTAGCAGGCTCCACTGGGCCACAGGGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494938.2
CDS GCA 72 bp CTCACTGTCCCAGCCCAAGAGGAGCAGTACCCGGACTaGAGCCACCTCATAACCGGCAGGGCAGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LTVPAQEEQYPD*SHLITGRAAAG
Trigger: GCCTGCTGCTGCCCTGCCGGTTATGAGGTGGCTGCAGTCCGGGTACTGCTCCTCTTGGGCTGGGACAGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465628.1
CDS CAA 72 bp GTGGCCCAGTGGAGCCTGCTAGGGACCTACCCGCCATaGAGGGTGGGCGTCAGGCCGAAGAGTGTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: VAQWSLLGTYPP*RVGVRPKSVQS
Trigger: ACTCTGCACACTCTTCGGCCTGACGCCCACCCTCAATGGCGGGTAGGTCCCTAGCAGGCTCCACTGGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494938.2
CDS CCA 72 bp CGGTGGGGGCCAGGAAGTAGACAACACGCAGCCTCTTaGGGAGCCGCAGGTTTCGGAAGGAAGACGGCTGCA +
Preference number: 6 (lower is better)
Translates to: RWGPGSRQHAAS*GAAGFGRKTAA
Trigger: TGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGTGTTGTCTACTTCCTGGCCCCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428413.5
CDS GCA 72 bp GGGATGAGCTCAGCGACACCAATCTCCTCCTTGAAGTaGACGTGGACCAGGCTCTCCGCCCGAAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GMSSATPISSLK*TWTRLSARRLQ
Trigger: CTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGTCGCTGAGCTCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000494938.2
ENST00000648151.1
CDS GCA 72 bp GGGGCACCCACATACTCAATCTCACTGGCAGACCCCTaGCTCAGCCAGTCTCCACCCAACGCTCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GAPTYSISLADP*LSQSPPNALCW
Trigger: CCAGCACAGAGCGTTGGGTGGAGACTGGCTGAGGCAGGGGTCTGCCAGTGAGATTGAGTATGTGGGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420588.5
CDS CCA 72 bp AGCTCAGCGACACCAATCTCCTCCTTGAAGTGCACGTaGACCAGGCTCTCCGCCCGAAGGCTGCAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SSATPISSLKCT*TRLSARRLQLG
Trigger: CCCCAACTGCAGCCTTCGGGCGGAGAGCCTGGTCCACGTGCACTTCAAGGAGGAGATTGGTGTCGCTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000441517.6
ENST00000494938.2
ENST00000648151.1
CDS CAA 90 bp CGCAGGCTGCCCAGGAACCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTAATCCTTCAC +
Preference number: 6 (lower is better)
Translates to: RRLPRNPLRLLSRLS*FAVRVHRWGRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTTCCTGGGCAGCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS TCA 72 bp GTCTCCACCCAACGCTCTGTGCTGGCCTCAGGAACATaGCGAGTACCCACCCACTCAGGCTGCTCAGTAGGC +
Preference number: 6 (lower is better)
Translates to: VSTQRSVLASGT*RVPTHSGCSVG
Trigger: GCCTACTGAGCAGCCTGAGTGGGTGGGTACTCGTCATGTTCCTGAGGCCAGCACAGAGCGTTGGGTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420588.5
ENST00000485967.1
CDS GCA 72 bp TGCCCAGACTTTAAGGGGCCATCACCACCACACAGCTaGTACGGGGAACGGGTGTTCACAGCCTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: CPDFKGPSPPHS*YGERVFTAWRV
Trigger: CACCCTCCAGGCTGTGAACACCCGTTCCCCGTAGCAGCTGTGTGGTGGTGATGGCCCCTTAAAGTCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468965.2
CDS CAA 72 bp CCCAGGAACCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTA +
Preference number: 6 (lower is better)
Translates to: PRNPLRLLSRLS*FAVRVHRWGRV
Trigger: TACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441517.6
CDS CCA 72 bp CCTGCAGAGGGCAGCAACAGGGCACAGGGCAACACATaGCCACTCTGCGACATGACTCACACAACCTCATGG +
Preference number: 6 (lower is better)
Translates to: PAEGSNRAQGNT*PLCDMTHTTSW
Trigger: CCATGAGGTTGTGTGAGTCATGTCGCAGAGTGGCCATGTGTTGCCCTGTGCCCTGTTGCTGCCCTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468965.2
CDS CAA 72 bp AGTACCCACCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTA +
Preference number: 6 (lower is better)
Translates to: STHPLRLLSRLS*FAVRVHRWGRV
Trigger: TACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTGGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420588.5
ENST00000448217.2
ENST00000485967.1
CDS CAA 72 bp TGCTTAGGCCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTA +
Preference number: 6 (lower is better)
Translates to: CLGPLRLLSRLS*FAVRVHRWGRV
Trigger: TACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGCCTAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416208.5
CDS CAA 90 bp AGCTCTCGCTGCTTAGGCCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTAATCCTTCAC +
Preference number: 6 (lower is better)
Translates to: SSRCLGPLRLLSRLS*FAVRVHRWGRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGCCTAAGCAGCGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416208.5
CDS CAA 90 bp TCTCACGCAGCCTTTCAGTCAGGGTCATCCTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTGACCATGGATCACCCTGGCACACAC +
Preference number: 6 (lower is better)
Translates to: SHAAFQSGSSSAEVT*LPSRKVTMDHPGTH
Trigger: GTGTGTGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGAGGATGACCCTGACTGAAAGGCTGCGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000545718.2
ENST00000648151.1
CDS TCA 72 bp ACCTTCCCTGAATCTTCCGGTCCCTCTAGAGGGGACTaGAGGCCTGATCCAACCCGGAAACCTCTAAGCCCC +
Preference number: 6 (lower is better)
Translates to: TFPESSGPSRGD*RPDPTRKPLSP
Trigger: GGGGCTTAGAGGTTTCCGGGTTGGATCAGGCCTTCAGTCCCCTCTAGAGGGACCGGAAGATTCAGGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465628.1
CDS CCA 72 bp CTTCACAGGGGTGGTGAATTCCACAGGTCCTGTTCCTaGCAAGGGGAGTTTCAGCAGTGGGTAGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LHRGGEFHRSCS*QGEFQQWVAAG
Trigger: GCCTGCTGCTACCCACTGCTGAAACTCCCCTTGCCAGGAACAGGACCTGTGGAATTCACCACCCCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000648151.1
CDS CAA 72 bp CCTGAGCTTCCTAAGGCCTGGCAGCAGGTCGGTCACTaGCAGACACAACTCCTCCAAGCTCCTGATCCCAGA +
Preference number: 6 (lower is better)
Translates to: PELPKAWQQVGH*QTQLLQAPDPR
Trigger: TCTGGGATCAGGAGCTTGGAGGAGTTGTGTCTGCAAGTGACCGACCTGCTGCCAGGCCTTAGGAAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS CAA 90 bp AACATGACGAGTACCCACCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTAATCCTTCAC +
Preference number: 6 (lower is better)
Translates to: NMTSTHPLRLLSRLS*FAVRVHRWGRVILH
Trigger: GTGAAGGATTACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGGTGGGTACTCGTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420588.5
ENST00000485967.1
CDS CAA 72 bp GCCTTTCAGTCAGGGTCATCCTCAGCCGAAGTCACCTaGCTGCCATCCCGGAAAGTGACCATGGATCACCCT +
Preference number: 6 (lower is better)
Translates to: AFQSGSSSAEVT*LPSRKVTMDHP
Trigger: AGGGTGATCCATGGTCACTTTCCGGGATGGCAGCAAGGTGACTTCGGCTGAGGATGACCCTGACTGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000545718.2
ENST00000648151.1
CDS CAA 72 bp AAAATCTCGCCACTCAGGCTGCTCAGTAGGCTCTCCTaGTTTGCGGTCAGAGTCCACAGGTGGGGGCGAGTA +
Preference number: 6 (lower is better)
Translates to: KISPLRLLSRLS*FAVRVHRWGRV
Trigger: TACTCGCCCCCACCTGTGGACTCTGACCGCAAACAAGGAGAGCCTACTGAGCAGCCTGAGTGGCGAGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320017.10
CDS TCA 72 bp GCTGGAACCAAGATGGCCGACTGGAGTTGTGCAGAATaGGCTTGCCGATGTCACAGCCTGAATTTCCACTGC +
Preference number: 6 (lower is better)
Translates to: AGTKMADWSCAE*ACRCHSLNFHC
Trigger: GCAGTGGAAATTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS CCA 72 bp ATTCACAAATCAGAAGCTGACCAACCTCAATCTCACTaGCAGACCCCTGCCTCAGCCAGTCTCCACCCAACG +
Preference number: 6 (lower is better)
Translates to: IHKSEADQPQSH*QTPASASLHPT
Trigger: CGTTGGGTGGAGACTGGCTGAGGCAGGGGTCTGCCAGTGAGATTGAGGTTGGTCAGCTTCTGATTTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485967.1
CDS CCA 72 bp TCTCTCAGCACGTGGTTCCGGATCTCCTCCACCAGTTaGAATGCCCGGGACAAAGGTGAACGAAATACATCT +
Preference number: 6 (lower is better)
Translates to: SLSTWFRISSTS*NARDKGERNTS
Trigger: AGATGTATTTCGTTCACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGATCCGGAACCACGTGCTGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000428413.5
ENST00000487942.1
ENST00000648151.1
CDS CCA 72 bp TGCTGGTGGATGGTCCCAATGATGTCAGGATCAGCATaGAAGCGTTCCCAGTCATTCTGCCAGAAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: CWWMVPMMSGSA*KRSQSFCQKFP
Trigger: TGGGAACTTCTGGCAGAATGACTGGGAACGCTTCCATGCTGATCCTGACATCATTGGGACCATCCACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS CAA 72 bp GGTAAGAAGGGAGAAAAGCCAGTTAACAAAGAGTACTaGGCTCTGCACACTAGGGCTGCTGGAGGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: GKKGEKPVNKEY*ALHTRAAGGRR
Trigger: TCGCCTCCCTCCAGCAGCCCTAGTGTGCAGAGCCAAGTACTCTTTGTTAACTGGCTTTTCTCCCTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495603.2
CDS TCA 72 bp GATCTCCTCCACCAGTTGGAATGCCCGGGACAAAGGTaGACGAAATACATCTACTGCCAGGAGGTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: DLLHQLECPGQR*TKYIYCQEVLV
Trigger: CACAAGAACCTCCTGGCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGCATTCCAACTGGTGGAGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS GCA 72 bp TCTGGGAGTTCCAGAAAGTGCAGATCTAGTCACCAATaGAAGGCAGAAATTAGAGGTGGCCCTTCTGACCGC +
Preference number: 6 (lower is better)
Translates to: SGSSRKCRSSHQ*KAEIRGGPSDR
Trigger: GCGGTCAGAAGGGCCACCTCTAATTTCTGCCTTGCATTGGTGACTAGATCTGCACTTTCTGGAACTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448217.2
CDS CCA 72 bp CTTGCTGCCATCCCGGAAAGTGACCATGGATCACCCTaGCACACACTTGACAGCACTGACAAAGAACAACAT +
Preference number: 6 (lower is better)
Translates to: LAAIPESDHGSP*HTLDSTDKEQH
Trigger: ATGTTGTTCTTTGTCAGTGCTGTCAAGTGTGTGCCAGGGTGATCCATGGTCACTTTCCGGGATGGCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265565.10
ENST00000320017.10
ENST00000416208.5
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000441517.6
ENST00000448217.2
ENST00000485967.1
ENST00000495603.2
ENST00000545718.2
ENST00000648151.1
CDS CCA 72 bp GTAAGAAGGGAGAAAAGCCAGTTAACAAAGAGTACTTaGCTCTGCACACTAGGGCTGCTGGAGGGAGGCGAT +
Preference number: 6 (lower is better)
Translates to: VRREKSQLTKST*LCTLGLLEGGD
Trigger: ATCGCCTCCCTCCAGCAGCCCTAGTGTGCAGAGCCAAGTACTCTTTGTTAACTGGCTTTTCTCCCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495603.2
CDS CAA 72 bp AACCAAGATGGCCGACTGGAGTTGTGCAGAATGAGCTaGCCGATGTCACAGCCTGAATTTCCACTGCCATGT +
Preference number: 6 (lower is better)
Translates to: NQDGRLELCRMS*PMSQPEFPLPC
Trigger: ACATGGCAGTGGAAATTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS CAA 72 bp GCTGAAATAAGCTGGAACCAAGATGGCCGACTGGAGTaGTGCAGAATGAGCTTGCCGATGTCACAGCCTGAA +
Preference number: 6 (lower is better)
Translates to: AEISWNQDGRLE*CRMSLPMSQPE
Trigger: TTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGCTTATTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS CAA 90 bp GCCCGGGACAAAGGTGAACGAAATACATCTACTGCCAGGAGGTTCTaGTGCCAGGGAAACACTGAGGACTTCACAAATATCTGCTGGACA +
Preference number: 6 (lower is better)
Translates to: ARDKGERNTSTARRF*CQGNTEDFTNICWT
Trigger: TGTCCAGCAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGTTCACCTTTGTCCCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS TCA 72 bp GGAGTTGTGCAGAATGAGCTTGCCGATGTCACAGCCTaGATTTCCACTGCCATGTTTCATACTAACTCCCCC +
Preference number: 6 (lower is better)
Translates to: GVVQNELADVTA*ISTAMFHTNSP
Trigger: GGGGGAGTTAGTATGAAACATGGCAGTGGAAATTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS GCA 72 bp ACACCAAATAACAAGTCTTTGAGTGTGGCTGAAGTCTaGAGGGTTTTAGGCTCGTGCTGGTGGATGGTCCCA +
Preference number: 6 (lower is better)
Translates to: TPNNKSLSVAEV*RVLGSCWWMVP
Trigger: TGGGACCATCCACCAGCACGAGCCTAAAACCCTGCAGACTTCAGCCACACTCAAAGACTTGTTATTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265565.10
ENST00000428413.5
ENST00000648151.1
CDS GCA 72 bp AGGGAGAAAAGCCAGTTAACAAAGAGTACTTGGCTCTaGACACTAGGGCTGCTGGAGGGAGGCGATAGTTAT +
Preference number: 6 (lower is better)
Translates to: REKSQLTKSTWL*TLGLLEGGDSY
Trigger: ATAACTATCGCCTCCCTCCAGCAGCCCTAGTGTGCAGAGCCAAGTACTCTTTGTTAACTGGCTTTTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495603.2
CDS CAA 90 bp AAAGAACTGGCTGAAATAAGCTGGAACCAAGATGGCCGACTGGAGTaGTGCAGAATGAGCTTGCCGATGTCACAGCCTGAATTTCCACTG +
Preference number: 6 (lower is better)
Translates to: KELAEISWNQDGRLE*CRMSLPMSQPEFPL
Trigger: CAGTGGAAATTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGCTTATTTCAGCCAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS TCA 72 bp ATCTACTGCCAGGAGGTTCTTGTGCCAGGGAAACACTaGGGACTTCACAAATATCTGCTGGACATAAGCCAC +
Preference number: 6 (lower is better)
Translates to: IYCQEVLVPGKH*GLHKYLLDISH
Trigger: GTGGCTTATGTCCAGCAGATATTTGTGAAGTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS CAA 90 bp ATAAGCTGGAACCAAGATGGCCGACTGGAGTTGTGCAGAATGAGCTaGCCGATGTCACAGCCTGAATTTCCACTGCCATGTTTCATACTA +
Preference number: 6 (lower is better)
Translates to: ISWNQDGRLELCRMS*PMSQPEFPLPCFIL
Trigger: TAGTATGAAACATGGCAGTGGAAATTCAGGCTGTGACATCGGCAAGCTCATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS CCA 72 bp TCCGCTTATGAGATAAAAGAACTGGCTGAAATAAGCTaGAACCAAGATGGCCGACTGGAGTTGTGCAGAATG +
Preference number: 6 (lower is better)
Translates to: SAYEIKELAEIS*NQDGRLELCRM
Trigger: CATTCTGCACAACTCCAGTCGGCCATCTTGGTTCCAGCTTATTTCAGCCAGTTCTTTTATCTCATAAGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS TCA 72 bp TGTGCAGGTACCTGGGTGTTTCACACACATGTGAGATaGGTCATTCTTGAACCTTGTTATGATGTCAGCACT +
Preference number: 6 (lower is better)
Translates to: CAGTWVFHTHVR*VILEPCYDVST
Trigger: AGTGCTGACATCATAACAAGGTTCAAGAATGACTCATCTCACATGTGTGTGAAACACCCAGGTACCTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648151.1
CDS CCA 72 bp AGAAAGACGGTCCAATTCAAGGGATTTAATGGGCATTaGAAACCGTGCCCCACAGAGTTAAAGAAACCAATG +
Preference number: 6 (lower is better)
Translates to: RKTVQFKGFNGH*KPCPTELKKPM
Trigger: CATTGGTTTCTTTAACTCTGTGGGGCACGGTTTCCAATGCCCATTAAATCCCTTGAATTGGACCGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487942.1
CDS CAA 72 bp AAAGGTGAACGAAATACATCTACTGCCAGGAGGTTCTaGTGCCAGGGAAACACTGAGGACTTCACAAATATC +
Preference number: 6 (lower is better)
Translates to: KGERNTSTARRF*CQGNTEDFTNI
Trigger: GATATTTGTGAAGTCCTCAGTGTTTCCCTGGCACAAGAACCTCCTGGCAGTAGATGTATTTCGTTCACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265565.10
ENST00000416847.5
ENST00000420588.5
ENST00000428413.5
ENST00000487942.1
ENST00000495603.2
ENST00000648151.1
CDS TCA 72 bp CAACATGTGCAGGTACCTGGGTGTTTCACACACATGTaGGATGAGTCATTCTTGAACCTTGTTATGATGTCA +
Preference number: 6 (lower is better)
Translates to: QHVQVPGCFTHM*DESFLNLVMMS
Trigger: TGACATCATAACAAGGTTCAAGAATGACTCATCTCACATGTGTGTGAAACACCCAGGTACCTGCACATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648151.1