RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAMP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000198794

Ensembl transcript IDs: ENST00000361900.10, ENST00000425597.8, ENST00000562212.5, ENST00000562327.5, ENST00000562765.5, ENST00000564141.1, ENST00000564491.5, ENST00000564779.5, ENST00000565923.5, ENST00000565989.5, ENST00000566872.5, ENST00000567529.1, ENST00000567535.5, ENST00000567920.5, ENST00000568018.5, ENST00000568081.1, ENST00000568119.5, ENST00000568423.5

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAGGGAGCAGCAGCGGCACCAGGAGAATGGCAAAGCAGGTCACTaGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCCAGG +
Preference number: 1 (lower is better)
Translates to: NREQQRHQENGKAGH*DPRTDLGPPSPDPR
Trigger: CCTGGGGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTGCCGCTGCTGCTCCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 90 bp CAGCCAGGACTGGGCCTGTGCTTCTGCTTGGGCCCTGAGTTCAAGTaGCCAGAACCGCCCTGTGACCAAGAGCAAGCCAGGGTGGGGGAA +
Preference number: 1 (lower is better)
Translates to: QPGLGLCFCLGPEFK*PEPPCDQEQARVGE
Trigger: TTCCCCCACCCTGGCTTGCTCTTGGTCACAGGGCGGTTCTGGGCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 90 bp CTGATTCATGGCACCCTGGGCTGCCCCCATGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCACTC +
Preference number: 1 (lower is better)
Translates to: LIHGTLGCPHGCVLG*LLHMWILPGPCGPL
Trigger: GAGTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATGAATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 90 bp CTGGGCTGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTGAGCTTTGCT +
Preference number: 1 (lower is better)
Translates to: LGCPHGCVLGCLLHM*ILPGPCGPLLLSFA
Trigger: AGCAAAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR GCA 90 bp GGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATT +
Preference number: 1 (lower is better)
Translates to: GGGILSLRLIHGTLG*PHGCVLGCLLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 90 bp ACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTaGGCCCTCCTTCACCCGACCCCAGGCCAGACCTTCCTACAAAGA +
Preference number: 1 (lower is better)
Translates to: TRRMAKQVTGTPELT*ALLHPTPGQTFLQR
Trigger: TCTTTGTAGGAAGGTCTGGCCTGGGGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp TCCGAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTaGGATGCCCACGGCCTGGATGATGCTGATGACCAACTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: SEEGDGSNPAADAPA*DAHGLDDADDQLSH
Trigger: ATGGCTCAGTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
3UTR GCA 90 bp CTCATACTGGTTCTCTCCCCGGGAAAGTGCATAGTTGCCTGGAGATaGAGCATCCCAGGGCCTGAACAAGCTGGGCCACACACCGGGATC +
Preference number: 1 (lower is better)
Translates to: LILVLSPGKCIVAWR*SIPGPEQAGPHTGI
Trigger: GATCCCGGTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCACTTTCCCGGGGAGAGAACCAGTATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp AATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: NTESEADSWHPGLPP*LRSGLPAAHVDSSR
Trigger: CCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR GCA 90 bp CCTCCCACCCTGCCTAACCTGAAATCCCATTCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGTGCTTCTGCTTGGGCCCTGAGTTCA +
Preference number: 1 (lower is better)
Translates to: PPTLPNLKSHSGYCA*SQDWACASAWALSS
Trigger: TGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGATTTCAGGTTAGGCAGGGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 90 bp TGTGCCCTGCCCCCACTTCTCATACTGGTTCTCTCCCCGGGAAAGTaGATAGTTGCCTGGAGATGCAGCATCCCAGGGCCTGAACAAGCT +
Preference number: 1 (lower is better)
Translates to: CALPPLLILVLSPGK*IVAWRCSIPGPEQA
Trigger: AGCTTGTTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCACTTTCCCGGGGAGAGAACCAGTATGAGAAGTGGGGGCAGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp GGGCCACACACCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATaGCCATATAGGTCCAAGCCAAAGAGGCAGGTAGGACAGGAAACT +
Preference number: 1 (lower is better)
Translates to: GPHTGIRLPKGRARA*PYRSKPKRQVGQET
Trigger: AGTTTCCTGTCCTACCTGCCTCTTTGGCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGGTGTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp CCACTTCTCATACTGGTTCTCTCCCCGGGAAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGGCCTGAACAAGCTGGGCCACACACC +
Preference number: 1 (lower is better)
Translates to: PLLILVLSPGKCIVA*RCSIPGPEQAGPHT
Trigger: GGTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCACTTTCCCGGGGAGAGAACCAGTATGAGAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp GTTACCAAAGACAGACACATTGGCTCAGGCAGCTCAACTGCCAGCTaGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGGCACCAG +
Preference number: 1 (lower is better)
Translates to: VTKDRHIGSGSSTAS*GTSSSRNREQQRHQ
Trigger: CTGGTGCCGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAGCCAATGTGTCTGTCTTTGGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp GCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCT +
Preference number: 1 (lower is better)
Translates to: APALPPGRRGWFTSH*STCNWGWRNTESEA
Trigger: AGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 90 bp CCTCCTGGAGCTACCAGAGAGAGAAGGGAAAGGGAGCCAAAGTTCTaGGGTAGGGGAGAGGAAGGGAAAGGGAAGAAGGGCCTAGACCTA +
Preference number: 1 (lower is better)
Translates to: PPGATRERREREPKF*GRGEEGKGKKGLDL
Trigger: TAGGTCTAGGCCCTTCTTCCCTTTCCCTTCCTCTCCCCTACCCCAGAACTTTGGCTCCCTTTCCCTTCTCTCTCTGGTAGCTCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 90 bp TCACTCAGTTACCAAAGACAGACACATTGGCTCAGGCAGCTCAACTaGCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCG +
Preference number: 1 (lower is better)
Translates to: SLSYQRQTHWLRQLN*QLGNIQLQKQGAAA
Trigger: CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAGCCAATGTGTCTGTCTTTGGTAACTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: RRGWFTSHWSTCNWG*RNTESEADSWHPGL
Trigger: CAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR TCA 90 bp CCCTGGCTCAGGATGGCCTGTAAGCCTAGGTATTGGGTTCCAAGCTaGAGCCAGGCCAGAGTAGCCAAGTGGGGTTTGGATTTTTGTCCA +
Preference number: 1 (lower is better)
Translates to: PWLRMACKPRYWVPS*SQARVAKWGLDFCP
Trigger: TGGACAAAAATCCAAACCCCACTTGGCTACTCTGGCCTGGCTTCAGCTTGGAACCCAATACCTAGGCTTACAGGCCATCCTGAGCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 90 bp TCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTaGTGGAGCCAGCCAGACCTTCCCCAGGGACCAATCATTACTGAC +
Preference number: 1 (lower is better)
Translates to: SRNPTVTERYLNASL*WSQPDLPQGPIITD
Trigger: GTCAGTAATGATTGGTCCCTGGGGAAGGTCTGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp AAAGGACCATCAGGAAGAGAATTTCCAGAGGCCCCTGGCTCAGGATaGCCTGTAAGCCTAGGTATTGGGTTCCAAGCTGAAGCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: KGPSGREFPEAPGSG*PVSLGIGFQAEARP
Trigger: TGGCCTGGCTTCAGCTTGGAACCCAATACCTAGGCTTACAGGCCATCCTGAGCCAGGGGCCTCTGGAAATTCTCTTCCTGATGGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 90 bp CCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCT +
Preference number: 1 (lower is better)
Translates to: PGRRGWFTSHWSTCN*GWRNTESEADSWHP
Trigger: AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR GCA 90 bp TGGTTTAGCTCTAAACACACATCTAGCACCACAAGAGACCTCCACTaGACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCAC +
Preference number: 1 (lower is better)
Translates to: WFSSKHTSSTTRDLH*TLFHEGTQTQLLPH
Trigger: GTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAGATGTGTGTTTAGAGCTAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
3UTR-3UTR CCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCCCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAARGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCTCTCACTGGGCCCTaGCTGCCTTCTCCTCTGACC +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDPLTGP*LPSPLT
Trigger: GGTCAGAGGAGAAGGCAGGCAGGGCCCAGTGAGAGG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLIPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCAGCATCCCAGGGCCTaGACAAGCTGGGCCACACAC +
Preference number: 2 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPQHPRA*TSWATH
Trigger: GTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPRGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR GCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCTACCCAGGTGGGCTCTaGACCCCCAGCTGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSYPGGL*TPSCVP
Trigger: GGGCACACAGCTGGGGGTGCAGAGCCCACCTGGGTA...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCCAGGACTGGGCCTGTaGTTCTGCTTGGGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAPGLGL*FCLGPE
Trigger: CTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCACCTGGCACATGGTaGGGTCAGGGTAGCAGAATC +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDPPGTW*GQGSRI
Trigger: GATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCATTCAGGCTATTGTaGTTGCAGCCAGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDPFRLL*LQPGLG
Trigger: GCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACGTAGGGAGTTCCGACTaGGTGAGGACAAGCCAAGAC +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDVGSSD*VRTSQD
Trigger: GTCTTGGCTTGTCCTCACCCAGTCGGAACTCCCTAC...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CAA 90 bp AGCTTCTGGTGGGAGAAGGGAAGGTGGGAAATGGGCAGATGCTCTTaGGGCGAGAACCCACTCCCCTTCAGGCCCCGCACACAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: SFWWEKGRWEMGRCS*GENPLPFRPRTQLE
Trigger: CTCTAGCTGTGTGCGGGGCCTGAAGGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCATTTCCCACCTTCCCTTCTCCCACCAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTGGAGTTCCGACTGGGTaGGGACAAGCCAAGACCAAG +
Preference number: 2 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPGVPTG*GQAKTK
Trigger: CTTGGTCTTGGCTTGTCCTCACCCAGTCGGAACTCC...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTACATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 2 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: LRSGLPAAHVDSSRPLWSPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...GGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: TATASRNPTVTERYLNASPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTGCAAGGGAATATCCCTaGCCTGTACCCACCCTCCCA +
Preference number: 2 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPAREYP*PVPTLP
Trigger: TGGGAGGGTGGGTACAGGCCAGGGATATTCCCTTGC...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGGCAAGGGAATATCCCTaGCCTGTACCCACCCTCCCA +
Preference number: 2 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAAREYP*PVPTLP
Trigger: TGGGAGGGTGGGTACAGGCCAGGGATATTCCCTTGC...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCACCTGGCACATGGTaGGGTCAGGGTAGCAGAATC +
Preference number: 2 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPPPGTW*GQGSRI
Trigger: GATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDKCIVA*RCSIPG
Trigger: CCCTGGGATGCTGCATCTCCAGGCAACTATGCACTT...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp TGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: CPHGCVLGCLLHMWILPGLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLIRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGRGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 2 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 2 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLIGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAATCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCTCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSSGYCA*SQDWAC
Trigger: ACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGA...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 2 (lower is better)
Translates to: LVGVAGSHLIGVRVIGGGNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: APQETSTAHYFTRGHRHSRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
3UTR-3UTR TCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACACGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 2 (lower is better)
Translates to: QLITLGRGQSFCYASPGPTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR GCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGTTTACATCTGACAACTaGCCAGCATGTCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAFTSDN*PACPSS
Trigger: GGAGCTGGGACATGCTGGGCAGTTGTCAGATGTAAA...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCAATCATTACTGACATaGCCTCTGCTCCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAQSLLT*PLLQLC
Trigger: GCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACAAACAGAACAGCTACTaGTTCCAGGAATCCAACGGT +
Preference number: 2 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDKQNSY*FQESNG
Trigger: ACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTGTTT...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 2 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp TGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: WFTSHWSTCNWGWRNTESGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...AGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACATCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp GCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ALPPGRRGWFTSHWSTCNSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...ATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: TCNWGWRNTESEADSWHPSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 2 (lower is better)
Translates to: TCNWGWRNTESEADSWHPVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp TGGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTGAGCTTTGCTGAAACTCCCGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 2 (lower is better)
Translates to: WILPGPCGPLLLSFAETPGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...GGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCACCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCCCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR GCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCCTGGGCCTGTGCTTCTaGTTGGGCCCTGAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSLGLCF*LGPEFK
Trigger: CTTGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAG...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: APQETSTAHYFTRGHRHSPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
3UTR-3UTR CCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTACCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 2 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAALKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 2 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
3UTR-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAATGCCACCTGGCACATaGTGGGGTCAGGGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: NPTVTERYLNASLCWSQPMPPGT*WGQGSR
Trigger: TCTGCTACCCTGACCCCACCATGTGCCAGGTGGCAT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 2 (lower is better)
Translates to: RRGWFTSHWSTCNWGWRNGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...ATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp TGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: WSTCNWGWRNTESEADSWSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...CCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp GAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 2 (lower is better)
Translates to: EKTAITVNMTVGISITTANDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACACTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp GGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: GWFTSHWSTCNWGWRNTERAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...CTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGGACCAATCATTACTaGCATGCCCTCTGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGTNHY*HALCSS
Trigger: GCTGGAGCAGAGGGCATGTCAGTAATGATTGGTCCC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: QNSYCFQESNGHREIPKCPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 2 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLILKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 2 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 2 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CAA 90 bp TCCAAGCTGAAGCCAGGCCAGAGTAGCCAAGTGGGGTTTGGATTTTaGTCCAAACAGCTCAGGCAAGCTTCTGGTGGGAGAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: SKLKPGQSSQVGFGF*SKQLRQASGGRREG
Trigger: ACCTTCCCTTCTCCCACCAGAAGCTTGCCTGAGCTGTTTGGACAAAAATCCAAACCCCACTTGGCTACTCTGGCCTGGCTTCAGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCCTGTGCCTTTACATCTaGCAACTGCCCAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSLCLYI*QLPSMS
Trigger: GGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAG...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAAGGTACCAGGGACTGTaGCCATTGCTCCCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSRYQGL*PLLPRE
Trigger: CTCTCTTGGGAGCAATGGTCACAGTCCCTGGTACCT...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 2 (lower is better)
Translates to: RRGWFTSHWSTCNWGWRNGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...ATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 2 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 2 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCCCCCATCAGCTTCCTTaGACTGTAAATCAGATTAGA +
Preference number: 2 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSPHQLP*TVNQIR
Trigger: TCTAATCTGATTTACAGTTCAAGGAAGCTGATGGGG...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp AGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 2 (lower is better)
Translates to: STCNWGWRNTESEADSWHGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...GTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 2 (lower is better)
Translates to: TCNWGWRNTESEADSWHPTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACATGGGCAAGGGAAGATTaGACAGGGAATGTGACATCA +
Preference number: 2 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTWARED*TGNVTS
Trigger: TGATGTCACATTCCCTGTGCAATCTTCCCTTGCCCA...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCATGGGAAATGGGCAGATaGTCTTTGGGCGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSWEMGR*SLGENP
Trigger: TGGGTTCTCGCCCAAAGAGCATCTGCCCATTTCCCA...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: QNSYCFQESNGHREIPKCPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: QNSYCFQESNGHREIPKCEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: QNSYCFQESNGHREIPKCLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCACAATCATTACTGACATaGCCTCTGCTCCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSQSLLT*PLLQLC
Trigger: GCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTG...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLIEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 2 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 2 (lower is better)
Translates to: RRGWFTSHWSTCNWGWRNLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...ATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 2 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 2 (lower is better)
Translates to: KRPPLHTISRGDTDTATTWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CAA 90 bp TGTTCCCCTTTATTATGGTTCACTCAGTTACCAAAGACAGACACATaGGCTCAGGCAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: CSPLLWFTQLPKTDT*AQAAQLPAGEHPAP
Trigger: TGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAGCCAATGTGTCTGTCTTTGGTAACTGAGTGAACCATAATAAAGGGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 2 (lower is better)
Translates to: TATASRNPTVTERYLNASTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCATTGCACAGGGAATGTaGCATCAGGGAACAGATGAG +
Preference number: 2 (lower is better)
Translates to: QNSYCFQESNGHREIPKCIAQGM*HQGTDE
Trigger: CTCATCTGTTCCCTGATGTCACATTCCCTGTGCAAT...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAAAACAGAACAGCTACTaGTTCCAGGAATCCAACGGT +
Preference number: 2 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSKQNSY*FQESNG
Trigger: ACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTGTTT...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR GCA 90 bp GAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: EKTAITVNMTVGISITTAEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 2 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp AGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: RAMKEKTAITVNMTVGISEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR TCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAATTGCACAGGGAATGTaGCATCAGGGAACAGATGAG +
Preference number: 2 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETIAQGM*HQGTDE
Trigger: CTCATCTGTTCCCTGATGTCACATTCCCTGTGCAAT...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR TCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR GCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 2 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 2 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCATGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 2 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562765.5
3UTR CCA 72 bp ATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTaGGCCCTCCTTCACCCGACCCCAGGCCAGACCTTC +
Preference number: 3 (lower is better)
Translates to: MAKQVTGTPELT*ALLHPTPGQTF
Trigger: GAAGGTCTGGCCTGGGGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp CAGCAGCGGCACCAGGAGAATGGCAAAGCAGGTCACTaGGACCCCAGAACTGACCTGGGCCCTCCTTCACCC +
Preference number: 3 (lower is better)
Translates to: QQRHQENGKAGH*DPRTDLGPPSP
Trigger: GGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTGCCGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp CCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: PHGCVLGCLLHM*ILPGPCGPLLL
Trigger: CAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR GCA 72 bp ATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: ILSLRLIHGTLG*PHGCVLGCLLH
Trigger: GTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 72 bp GGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTaGGATGCCCACGGCCTGGATGATGCTGATGACCAA +
Preference number: 3 (lower is better)
Translates to: GDGSNPAADAPA*DAHGLDDADDQ
Trigger: TTGGTCATCAGCATCATCCAGGCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
3UTR CCA 72 bp TCTGAGGCTGATTCATGGCACCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGAT +
Preference number: 3 (lower is better)
Translates to: SEADSWHPGLPP*LRSGLPAAHVD
Trigger: ATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR TCA 72 bp GTGCATAGTTGCCTGGAGATGCAGCATCCCAGGGCCTaGACAAGCTGGGCCACACACCGGGATCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: VHSCLEMQHPRA*TSWATHRDQAS
Trigger: GGAAGCCTGATCCCGGTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp TGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTaGCACCTGGTAGGCGTGGCTGGTTCACATCTCATT +
Preference number: 3 (lower is better)
Translates to: CGLSPLSQWPQL*HLVGVAGSHLI
Trigger: AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCATGGGCAGATGCTCTTaGGGCGAGAACCCACTCCCC +
Preference number: 3 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSMGRCS*GENPLP
Trigger: GGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCAT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR TCA 72 bp GAACCCTGCTTGGTAACCACAAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACC +
Preference number: 3 (lower is better)
Translates to: EPCLVTTNDDVA*APCPNGPSSAT
Trigger: GGTGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAGCAGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCTGGGACACTCAGCCTaGGGGAAGACAAAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPLGHSA*GKTKKS
Trigger: GCTTTTCTTTGTCTTCCCCAAGGCTGAGTGTCCCAG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCTGGGACACTCAGCCTaGGGGAAGACAAAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAALGHSA*GKTKKS
Trigger: GCTTTTCTTTGTCTTCCCCAAGGCTGAGTGTCCCAG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTATGTTCTCACACTGCTaGGAACAGAACAGCCCCACG +
Preference number: 3 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPMFSHC*EQNSPT
Trigger: CGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp CCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTaGTGGAGCCAGCCAGACCTTCCCCAGGGACCAATC +
Preference number: 3 (lower is better)
Translates to: PTVTERYLNASL*WSQPDLPQGPI
Trigger: GATTGGTCCCTGGGGAAGGTCTGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp CCCCCACTTCTCATACTGGTTCTCTCCCCGGGAAAGTaGATAGTTGCCTGGAGATGCAGCATCCCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: PPLLILVLSPGK*IVAWRCSIPGP
Trigger: AGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCACTTTCCCGGGGAGAGAACCAGTATGAGAAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp GACAGACACATTGGCTCAGGCAGCTCAACTGCCAGCTaGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: DRHIGSGSSTAS*GTSSSRNREQQ
Trigger: CTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAGCCAATGTGTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp CCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGTACGTGTAATTGGGGG +
Preference number: 3 (lower is better)
Translates to: PMAPALPPGRRG*FTSHWSTCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 3 (lower is better)
Translates to: QLITLGRGQSFCYASPGPKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
3UTR-3UTR CAA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCATCCCATTCAGGCTATaGTGCTTGCAGCCAGGACTG +
Preference number: 3 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSIPFRL*CLQPGL
Trigger: CAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGAT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp CTGCCTAACCTGAAATCCCATTCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGTGCTTCTGCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: LPNLKSHSGYCA*SQDWACASAWA
Trigger: GGCCCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGATTTCAGGTTAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp GACCCCAGGCCAGACCTTCCTACAAAGATGAATGTGTaGCCTGCCCCCACTTCTCATACTGGTTCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: DPRPDLPTKMNV*PAPTSHTGSLP
Trigger: GGGGAGAGAACCAGTATGAGAAGTGGGGGCAGGGCACACATTCATCTTTGTAGGAAGGTCTGGCCTGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp ACCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATaGCCATATAGGTCCAAGCCAAAGAGGCAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: TGIRLPKGRARA*PYRSKPKRQVG
Trigger: TCCTACCTGCCTCTTTGGCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp ATACTGGTTCTCTCCCCGGGAAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGGCCTGAACAAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ILVLSPGKCIVA*RCSIPGPEQAG
Trigger: CCCAGCTTGTTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTATGCACTTTCCCGGGGAGAGAACCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR TCA 72 bp GAGCCAGCCAGACCTTCCCCAGGGACCAATCATTACTaGCATGCCCTCTGCTCCAGCTGTGCCTTTACATCT +
Preference number: 3 (lower is better)
Translates to: EPARPSPGTNHY*HALCSSCAFTS
Trigger: AGATGTAAAGGCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTGGTCCCTGGGGAAGGTCTGGCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp CTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGGTGGCGGAATACTGAG +
Preference number: 3 (lower is better)
Translates to: LPPGRRGWFTSH*STCNWGWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp TGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: CPHGCVLGCLLHMWILPGYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...GCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp CTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LRSGLPAAHVDSSRPLWSYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...GGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCATTCAGGCTATTGTGCTaGCAGCCAGGACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSFRLLC*QPGLGL
Trigger: CAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAA...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGTAGCCAAGTGGGGTTaGGATTTTTGTCCAAACAGC +
Preference number: 3 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSVAKWG*DFCPNS
Trigger: GCTGTTTGGACAAAAATCCAAACCCCACTTGGCTAC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR TCA 72 bp AGGATGGCCTGTAAGCCTAGGTATTGGGTTCCAAGCTaGAGCCAGGCCAGAGTAGCCAAGTGGGGTTTGGAT +
Preference number: 3 (lower is better)
Translates to: RMACKPRYWVPS*SQARVAKWGLD
Trigger: ATCCAAACCCCACTTGGCTACTCTGGCCTGGCTTCAGCTTGGAACCCAATACCTAGGCTTACAGGCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR GCA 72 bp ACACAGCTAGAGCCTCTACCAGCCATGTTCTCACACTaGTTGGAACAGAACAGCCCCACGGGCCTAAAACCA +
Preference number: 3 (lower is better)
Translates to: TQLEPLPAMFSH*LEQNSPTGLKP
Trigger: TGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACATGGCTGGTAGAGGCTCTAGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp AAATCCCATTCAGGCTATTGTGCTTGCAGCCAGGACTaGGCCTGTGCTTCTGCTTGGGCCCTGAGTTCAAGT +
Preference number: 3 (lower is better)
Translates to: KSHSGYCACSQD*ACASAWALSSS
Trigger: ACTTGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 3 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp TTCGTTCCGAAGAAGGAGATGGTAGCAATCCAGCCGCTGCAGGAAGAGGCCAGTAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 3 (lower is better)
Translates to: FVPKKEMVAIQPLQEEASKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...ACTGGCCTCTTCCTGCAGCGGCTGGATTGCTACCATCTCCTTCTTCGGAACGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567529.1
3UTR-3UTR CAA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAATGGGCAAGGGAAGATaGCACAGGGAATGTGACATC +
Preference number: 3 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTMGKGR*HRECDI
Trigger: GATGTCACATTCCCTGTGCAATCTTCCCTTGCCCAT...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CCA 72 bp TCAGGAAGAGAATTTCCAGAGGCCCCTGGCTCAGGATaGCCTGTAAGCCTAGGTATTGGGTTCCAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: SGREFPEAPGSG*PVSLGIGFQAE
Trigger: TTCAGCTTGGAACCCAATACCTAGGCTTACAGGCCATCCTGAGCCAGGGGCCTCTGGAAATTCTCTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 3 (lower is better)
Translates to: NPTVTERYLNASLCWSQPKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR-3UTR CAA 90 bp TGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 3 (lower is better)
Translates to: WSTCNWGWRNTESEADSWKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...CCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR-3UTR CAA 90 bp TGGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTGAGCTTTGCTGAAACTCCCTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: WILPGPCGPLLLSFAETPYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...GGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 72 bp CGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCA +
Preference number: 3 (lower is better)
Translates to: RGWFTSHWSTCN*GWRNTESEADS
Trigger: TGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR CCA 72 bp TGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAGGCTGATTCATGGCAC +
Preference number: 3 (lower is better)
Translates to: WFTSHWSTCNWG*RNTESEADSWH
Trigger: GTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
3UTR GCA 72 bp TCTAAACACACATCTAGCACCACAAGAGACCTCCACTaGACACTATTTCACGAGGGGACACAGACACAGCTA +
Preference number: 3 (lower is better)
Translates to: SKHTSSTTRDLH*TLFHEGTQTQL
Trigger: TAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAGATGTGTGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
3UTR-3UTR CAA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTATATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCCGCGGCCGTTCGGCTaGCGAAAGGCCGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAPRPFG*RKAAAL
Trigger: CAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CGTTCCGAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATCCGCGGCCGTTCGGCTaGCGAAAGGCCGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSEEGDGSNPAADAPAWDPRPFG*RKAAAL
Trigger: CAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGG...ATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTCGGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562765.5
ENST00000564491.5
CDS-3UTR CCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGCCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CGTTCCGAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATCCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSEEGDGSNPAADAPAWDPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...ATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTCGGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562765.5
CDS-3UTR GCA 90 bp TGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPHGCVLGCLLHMWILPGGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...GCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp TGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLRSGLPAAHVDSSRPLWGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...CCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCTACCCAGGTGGGCTCTaGACCCCCAGCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAYPGGL*TPSCVP
Trigger: GGGCACACAGCTGGGGGTGCAGAGCCCACCTGGGTA...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCACCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AFWAACCTCGFFQAPVVHPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...GTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGTGGCTCCCGTCACCTaGGCAGAGGGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPVAPVT*AEGQGF
Trigger: GAAGCCCTGGCCCTCTGCCCAGGTGACGGGAGCCAC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR GCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACCGCGGCCGTTCGGCTaGCGAAAGGCCGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGPRPFG*RKAAAL
Trigger: CAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGG...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLRGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACCCGTGAGGGGTCCCTaGGCCAGGGTCAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGPVRGP*ARVRGA
Trigger: GGCCCCTCTGACCCTGGCCCAGGGACCCCTCACGGG...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGCAGCAACTGGGGGCATaGGGAGGAGGCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLQQLGA*GGGRGT
Trigger: TGTCCCTCTGCCTCCTCCCCATGCCCCCAGTTGCTG...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTACGGGGAGGCGCGGAGTaGAGCCGCAGCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVRGGAE*SRSQLL
Trigger: GAGGAGCTGGCTGCGGCTCCACTCCGCGCCTCCCCG...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS-3UTR TCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAARAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCGTGCCTAGCCCTCTaGGCCCTGTCCTACCAGATC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPCLAL*ALSYQI
Trigger: GATCTGGTAGGACAGGGCTCAGAGGGCTAGGCACGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACCTTCTGCTTGGGCCCTaGGTTCAAGTGCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDLLLGP*VQVPRT
Trigger: GGTTCTGGGCACTTGAACTCAGGGCCCAAGCAGAAG...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATCCGCGGCCGTTCGGCTaGCGAAAGGCCGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRGWFTSHWSTCNWGWRNPRPFG*RKAAAL
Trigger: CAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGG...ATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562765.5
CDS-3UTR GCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CGTTCCGAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSEEGDGSNPAADAPAWDAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...ATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTCGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR GCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAARGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAAGGAGCTGTCAGTCCTaGGGCAGAGGAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPRSCQS*GRGGGS
Trigger: GGAGCCACCTCCTCTGCCGCAGGACTGACAGCTCCT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCATGATGTTACCAGCTaGCCCAGTGGCCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAHDVTS*PSGLPT
Trigger: TGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACTCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCCAGCAACTGGGGGCATaGGGAGGAGGCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPQQLGA*GGGRGT
Trigger: TGTCCCTCTGCCTCCTCCCCATGCCCCCAGTTGCTG...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCAGGGAGCCAAAGTTCTaGGGTAGGGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAREPKF*GRGEEG
Trigger: CCCTTCCTCTCCCCTACCCCAGAACTTTGGCTCCCT...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGCTCACTTTCTCTGCCATaGTGTTACCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGDGSNPAADAPAWDAHGSLSLP*CYQLAQ
Trigger: CTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGA...GCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR TCA 90 bp ATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGCCTGGATGTCACTTTCTCTGCCATaGTGTTACCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MVAIQPQTPQPGMPTAWMSLSLP*CYQLAQ
Trigger: CTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGA...CATCCAGGCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR TCA 90 bp GCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCACAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: AFWAACCTCGFFQAPVVHNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCCCGTGCCTAGCCCTCTaGGCCCTGTCCTACCAGATC +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSPCLAL*ALSYQI
Trigger: GATCTGGTAGGACAGGGCTCAGAGGGCTAGGCACGG...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGCTTCTGCTTGGGCCCTaGGTTCAAGTGCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLLLLGP*VQVPRT
Trigger: GGTTCTGGGCACTTGAACTCAGGGCCCAAGCAGAAG...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp TGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: WLRSGLPAAHVDSSRPLWGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...CCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCACGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: AFWAACCTCGFFQAPVVHGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...GTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp TGGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTGAGCTTTGCTGAAACTCCCCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: WILPGPCGPLLLSFAETPHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...GGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCCATTCAGGCTATTGTaGTTGCAGCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAPFRLL*LQPGLG
Trigger: GCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGCTCAGGCAGCTCAACTaGCAGCTGGGGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLLRQLN*QLGNIQ
Trigger: CTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAG...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTGCCCCCATCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GWRNTESEADSWHPGLPPSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGGCCTGTGCTTCTGCTTaGGCCCTGAGTTCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLACASA*ALSSSA
Trigger: GGCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGC...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGTGGGCAGATGCTCTTTaGGCGAGAACCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLWADAL*ARTHSP
Trigger: AGGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCA...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCAGCTCAACTGCCAGCTaGGGAACATCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAASSTAS*GTSSSR
Trigger: TCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCT...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPGSRPA*RCSTSR
Trigger: TCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR TCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR TCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAANDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAALGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGAGTTCCGACTGGGTaGGGACAAGCCAAGACCAAG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGVPTG*GQAKTK
Trigger: CTTGGTCTTGGCTTGTCCTCACCCAGTCGGAACTCC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR GCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCGGGAAAGTGCATAGTTaGCTGGAGATGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAGKVHS*LEMQHP
Trigger: GGGATGCTGCATCTCCAGGCAACTATGCACTTTCCC...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCTCAGGCAGCTCAACTaGCAGCTGGGGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPLRQLN*QLGNIQ
Trigger: CTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAG...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCTCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLISEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EEGDGSNPAADAPAWDAHPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...GTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562765.5
ENST00000568423.5
CDS-3UTR CCA 90 bp TGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WLRSGLPAAHVDSSRPLWPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...CCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 4 (lower is better)
Translates to: EEGDGSNPAADAPAWDAHGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...GTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562765.5
CDS-3UTR CCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTGCCTGTGCTTCTGCTTaGGCCCTGAGTTCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPACASA*ALSSSA
Trigger: GGCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGC...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCTGGGCAGATGCTCTTTaGGCGAGAACCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPWADAL*ARTHSP
Trigger: AGGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCA...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCGGCAAAGCAGGTCACTaGGACCCCAGAACTGACCTG +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPGKAGH*DPRTDL
Trigger: CAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp TGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WLRSGLPAAHVDSSRPLWMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...CCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCGGGACCAATCATTACTaGCATGCCCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPGTNHY*HALCSS
Trigger: GCTGGAGCAGAGGGCATGTCAGTAATGATTGGTCCC...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTTATTGGGTTCCAAGCTaGAGCCAGGCCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPYWVPS*SQARVA
Trigger: GGCTACTCTGGCCTGGCTTCAGCTTGGAACCCAATA...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCCAGCATCCCAGGGCCTaGACAAGCTGGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSQHPRA*TSWATH
Trigger: GTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTG...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACCGCGGCCGTTCGGCTaGCGAAAGGCCGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVPRPFG*RKAAAL
Trigger: CAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTGCCCCCAGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: GWRNTESEADSWHPGLPPGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCTTTACATCTGACAACTaGCCAGCATGTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAFTSDN*PACPSS
Trigger: GGAGCTGGGACATGCTGGGCAGTTGTCAGATGTAAA...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCAATCATTACTGACATaGCCTCTGCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAQSLLT*PLLQLC
Trigger: GCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTG...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCCCATTCAGGCTATTGTaGTTGCAGCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPPFRLL*LQPGLG
Trigger: GCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGG...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGACCTTCCGAAACTCCTaGCTGGCAGCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAATFRNS*LAAGKE
Trigger: TTCCTTCCCTGCTGCCAGCCAGGAGTTTCGGAAGGT...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361900.10
CDS-3UTR CCA 90 bp TGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: CPHGCVLGCLLHMWILPGVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...GCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTCCACCCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: AFWAACCTCGFFQAPVVHPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...GTGGACCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCATGCCACCTGGCACATaGTGGGGTCAGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSMPPGT*WGQGSR
Trigger: TCTGCTACCCTGACCCCACCATGTGCCAGGTGGCAT...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCAATGCCTCACTGTGCTaGAGCCAGCCAGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSNASLC*SQPDLP
Trigger: GGGAAGGTCTGGCTGGCTCCAGCACAGTGAGGCATT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGGTAGGGAGTTCCGACTaGGTGAGGACAAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGVGSSD*VRTSQD
Trigger: GTCTTGGCTTGTCCTCACCCAGTCGGAACTCCCTAC...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCAGGCAAGCTTCTGGTaGGAGAAGGGAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPQASFW*EKGRWE
Trigger: TTCCCACCTTCCCTTCTCCCACCAGAAGCTTGCCTG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCCAGGCAAGCTTCTGGTaGGAGAAGGGAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPQASFW*EKGRWE
Trigger: TTCCCACCTTCCCTTCTCCCACCAGAAGCTTGCCTG...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGCCCCTGGCTCAGGATaGCCTGTAAGCCTAGGTATT +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPAPGSG*PVSLGI
Trigger: AATACCTAGGCTTACAGGCCATCCTGAGCCAGGGGC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTATTTCCAGAGGCCCCTaGCTCAGGATGGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPISRGP*LRMACK
Trigger: CTTACAGGCCATCCTGAGCCAGGGGCCTCTGGAAAT...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGGATCACAGGCCTCCTaGAGCTACCAGAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPGSQAS*SYQREK
Trigger: CTTCTCTCTCTGGTAGCTCCAGGAGGCCTGTGATCC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCACCCCAGAACTGACCTaGGCCCTCCTTCACCCGACC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSTPELT*ALLHPT
Trigger: GGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGT...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAAGCTCAACTGCCAGCTaGGGAACATCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPSSTAS*GTSSSR
Trigger: TCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATCACTTTCTCTGCCATaGTGTTACCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPSLSLP*CYQLAQ
Trigger: CTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGTCACTTTCTCTGCCATaGTGTTACCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAASLSLP*CYQLAQ
Trigger: CTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGA...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGCTGTGCCTTTACATCTaGCAACTGCCCAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAALCLYI*QLPSMS
Trigger: GGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAG...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCTATTGGGTTCCAAGCTaGAGCCAGGCCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSYWVPS*SQARVA
Trigger: GGCTACTCTGGCCTGGCTTCAGCTTGGAACCCAATA...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCCATGGCACCCTGGGCTaGCCCCATGGCTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTHGTLG*PHGCVL
Trigger: CAGAACGCAGCCATGGGGGCAGCCCAGGGTGCCATG...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCTGGGCAAGGGAAGATTaGACAGGGAATGTGACATCA +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAWARED*TGNVTS
Trigger: TGATGTCACATTCCCTGTGCAATCTTCCCTTGCCCA...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGCAATCATTACTGACATaGCCTCTGCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLQSLLT*PLLQLC
Trigger: GCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTG...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCTAAATGCCTCACTGTaGTGGAGCCAGCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPLNASL*WSQPDL
Trigger: AAGGTCTGGCTGGCTCCAGCACAGTGAGGCATTTAG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAGGCCCTGAGTTCAAGTaGCCAGAACCGCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGGPEFK*PEPPCD
Trigger: GTCACAGGGCGGTTCTGGGCACTTGAACTCAGGGCC...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCCAGGACTGGGCCTGTaGTTCTGCTTGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPPGLGL*FCLGPE
Trigger: CTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCGCCATGTTCTCACACTaGTTGGAACAGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPAMFSH*LEQNSP
Trigger: GGGGCTGTTCTGTTCCAAGCAGTGTGAGAACATGGC...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCTGGGAAATGGGCAGATaGTCTTTGGGCGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPWEMGR*SLGENP
Trigger: TGGGTTCTCGCCCAAAGAGCATCTGCCCATTTCCCA...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCGAGGCCAAAGTTGGTaGCTCCCCCGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPRGQSW*LPRLRS
Trigger: TGATCGGAGGCGGGGGAGCCACCAACTTTGGCCTCG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACCGAGGCCAAAGTTGGTaGCTCCCCCGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHRGQSW*LPRLRS
Trigger: TGATCGGAGGCGGGGGAGCCACCAACTTTGGCCTCG...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGCCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCAGCAACTGGGGGCATaGGGAGGAGGCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPQQLGA*GGGRGT
Trigger: TGTCCCTCTGCCTCCTCCCCATGCCCCCAGTTGCTG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGCTTGCAGCCAGGACTaGGCCTGTGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSACSQD*ACASAW
Trigger: CCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCTGTTCTCACACTGCTTaGAACAGAACAGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPCSHTA*NRTAPR
Trigger: CCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACA...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTTGTTCTCACACTGCTTaGAACAGAACAGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPCSHTA*NRTAPR
Trigger: CCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACA...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCATTTCCAGAGGCCCCTaGCTCAGGATGGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSISRGP*LRMACK
Trigger: CTTACAGGCCATCCTGAGCCAGGGGCCTCTGGAAAT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCGGTAGAGCCAGAGCATaGCCATATAGGTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPGRARA*PYRSKP
Trigger: TGGCTTGGACCTATATGGCCATGCTCTGGCTCTACC...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPKCIVA*RCSIPG
Trigger: CCCTGGGATGCTGCATCTCCAGGCAACTATGCACTT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAACCCCAGAACTGACCTaGGCCCTCCTTCACCCGACC +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPTPELT*ALLHPT
Trigger: GGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATCCCGGCATCTGTTCTTaGTCGGGGTTCTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNPGICS*SGFCRG
Trigger: GCCGCGGCAGAACCCCGACCAAGAACAGATGCCGGG...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564491.5
CDS-3UTR TCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGAGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGGSRPA*RCSTSR
Trigger: TCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACC...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGGAGTTCCGACTGGGTaGGGACAAGCCAAGACCAAG +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSGVPTG*GQAKTK
Trigger: CTTGGTCTTGGCTTGTCCTCACCCAGTCGGAACTCC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCCAGCATCCCAGGGCCTaGACAAGCTGGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTQHPRA*TSWATH
Trigger: GTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTG...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGCTTTGTCCTGAACCTTaGTGGGGCAGCGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMLCPEP*WGSDWG
Trigger: CCCCCAGTCGCTGCCCCATCAAGGTTCAGGACAAAG...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564491.5
CDS-3UTR TCA 90 bp TGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTCAGGCGTGGCGAGGCTaGAGTCTGGGTCTTCCGCGC +
Preference number: 4 (lower is better)
Translates to: WFTSHWSTCNWGWRNTESQAWRG*SLGLPR
Trigger: GCGCGGAAGACCCAGACTTCAGCCTCGCCACGCCTG...AGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS-3UTR GCA 90 bp AGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: STCNWGWRNTESEADSWHAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...GTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562765.5
ENST00000568423.5
CDS-3UTR GCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSRGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCAGGGGCCAGTCTTTCTaGTATGCCTCCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EKTAITVNMTVGISITTARGQSF*YASPGP
Trigger: GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCT...GGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562765.5
CDS-3UTR GCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCAATCATTACTGACATaGCCTCTGCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPQSLLT*PLLQLC
Trigger: GCACAGCTGGAGCAGAGGGCATGTCAGTAATGATTG...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCTGGGAAATGGGCAGATaGTCTTTGGGCGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSWEMGR*SLGENP
Trigger: TGGGTTCTCGCCCAAAGAGCATCTGCCCATTTCCCA...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCATAGTTGCCTGGAGATaGAGCATCCCAGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSIVAWR*SIPGPE
Trigger: TTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTAT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACACTCAGGCAGCTCAACTaGCAGCTGGGGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTLRQLN*QLGNIQ
Trigger: CTGGATGTTCCCCAGCTGGCAGTTGAGCTGCCTGAG...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGTAGACCTGTGTGTTaGAACATTACACAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGRPVC*NITQGG
Trigger: CCCTCCCTGTGTAATGTTGCAACACACAGGTCTACC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR CCA 90 bp GAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGCGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: EGDGSNPAADAPAWDAHGEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...GCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR CCA 90 bp ATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGCCTGGATGGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: MVAIQPQTPQPGMPTAWMVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...CATCCAGGCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACCCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp GCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATCCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: ALPPGRRGWFTSHWSTCNPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...ATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTCCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: TCNWGWRNTESEADSWHPPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp CGTTCCGAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RSEEGDGSNPAADAPAWDTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...ATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTCGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562765.5
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 4 (lower is better)
Translates to: EEGDGSNPAADAPAWDAHLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...GTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562765.5
ENST00000568423.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCAATGCCTCACTGTGCTaGAGCCAGCCAGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSNASLC*SQPDLP
Trigger: GGGAAGGTCTGGCTGGCTCCAGCACAGTGAGGCATT...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCACCCCAGAACTGACCTaGGCCCTCCTTCACCCGACC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTTPELT*ALLHPT
Trigger: GGTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGGCAAAGCAGGTCACTaGGACCCCAGAACTGACCTG +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTGKAGH*DPRTDL
Trigger: CAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGGCGAGGCTGAAGTCTaGGTCTTCCGCGCCCCGCGA +
Preference number: 4 (lower is better)
Translates to: WFTSHWSTCNWGWRNTESGEAEV*VFRAPR
Trigger: TCGCGGGGCGCGGAAGACCCAGACTTCAGCCTCGCC...AGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS-3UTR TCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPGSRPA*RCSTSR
Trigger: TCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACC...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR TCA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGATTGCACAGGGAATGTaGCATCAGGGAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAIAQGM*HQGTDE
Trigger: CTCATCTGTTCCCTGATGTCACATTCCCTGTGCAAT...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGGGACCAATCATTACTaGCATGCCCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSGTNHY*HALCSS
Trigger: GCTGGAGCAGAGGGCATGTCAGTAATGATTGGTCCC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCTTCTGCTTGGGCCCTaGGTTCAAGTGCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPLLLGP*VQVPRT
Trigger: GGTTCTGGGCACTTGAACTCAGGGCCCAAGCAGAAG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCGGTAGGACAGGAAACTaGTTGGAGGTAACATCCAAC +
Preference number: 4 (lower is better)
Translates to: QLITLGRGQSFCYASPGPGRTGN*LEVTSN
Trigger: GTTGGATGTTACCTCCAATCAGTTTCCTGTCCTACC...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACAGCATCCCAGGGCCTaGACAAGCTGGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASQHPRA*TSWATH
Trigger: GTGTGTGGCCCAGCTTGTTCAGGCCCTGGGATGCTG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR GCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGACCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562765.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATGGGCAAGGGAAGATTaGACAGGGAATGTGACATCA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPWARED*TGNVTS
Trigger: TGATGTCACATTCCCTGTGCAATCTTCCCTTGCCCA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCTGGGCCTGTGCTTCTaGTTGGGCCCTGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPLGLCF*LGPEFK
Trigger: CTTGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCCAGGACTGGGCCTGTaGTTCTGCTTGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCPGLGL*FCLGPE
Trigger: CTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCATGATGTTACCAGCTaGCCCAGTGGCCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEHDVTS*PSGLPT
Trigger: TGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATG...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCGAGGCCAAAGTTGGTaGCTCCCCCGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCRGQSW*LPRLRS
Trigger: TGATCGGAGGCGGGGGAGCCACCAACTTTGGCCTCG...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGTCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAESSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGATGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCCCTGGGCTGCCCCCATaGCTGCGTTCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MKEKTAITVNMTVGISITPGLPP*LRSGLP
Trigger: AGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCAGG...GGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: STCNWGWRNTESEADSWHSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...GTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGCAAGGGAATATCCCTaGCCTGTACCCACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHAREYP*PVPTLP
Trigger: TGGGAGGGTGGGTACAGGCCAGGGATATTCCCTTGC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCACCACCTGGCACATGGTaGGGTCAGGGTAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPPPGTW*GQGSRI
Trigger: GATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACATGCCACCTGGCACATaGTGGGGTCAGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHMPPGT*WGQGSR
Trigger: TCTGCTACCCTGACCCCACCATGTGCCAGGTGGCAT...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGCCTGTGCTTCTGCTTaGGCCCTGAGTTCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPACASA*ALSSSA
Trigger: GGCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGC...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCCAGGCAAGCTTCTGGTaGGAGAAGGGAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSQASFW*EKGRWE
Trigger: TTCCCACCTTCCCTTCTCCCACCAGAAGCTTGCCTG...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCCCCTGGCTCAGGATaGCCTGTAAGCCTAGGTATT +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTAPGSG*PVSLGI
Trigger: AATACCTAGGCTTACAGGCCATCCTGAGCCAGGGGC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGCCCCTGGCTCAGGATaGCCTGTAAGCCTAGGTATT +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSAPGSG*PVSLGI
Trigger: AATACCTAGGCTTACAGGCCATCCTGAGCCAGGGGC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAATTTCCAGAGGCCCCTaGCTCAGGATGGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTISRGP*LRMACK
Trigger: CTTACAGGCCATCCTGAGCCAGGGGCCTCTGGAAAT...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTCCTCGGGGAACAGCCTaGCCCAAAGCCTCACTCCTC +
Preference number: 4 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIPRGTA*PKASLL
Trigger: GAGGAGTGAGGCTTTGGGCCAGGCTGTTCCCCGAGG...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568423.5
3UTR CAA 72 bp CAGCTAGAGCCTCTACCAGCCATGTTCTCACACTGCTaGGAACAGAACAGCCCCACGGGCCTAAAACCACTC +
Preference number: 4 (lower is better)
Translates to: QLEPLPAMFSHC*EQNSPTGLKPL
Trigger: GAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACATGGCTGGTAGAGGCTCTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR TCA 90 bp GCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: ALPPGRRGWFTSHWSTCNGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...ATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCAGGAGCTGTCAGTCTTaGAGGCCTTGTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSRSCQS*RPCKWA
Trigger: GGCCCATTTACAAGGCCTTCAAGACTGACAGCTCCT...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCAATGACGATGTGGCTTaGGCCCCCTGTCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTNDDVA*APCPNG
Trigger: GCCATTGGGACAGGGGGCTCAAGCCACATCGTCATT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTACTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACCGTGCCTAGCCCTCTaGGCCCTGTCCTACCAGATC +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVPCLAL*ALSYQI
Trigger: GATCTGGTAGGACAGGGCTCAGAGGGCTAGGCACGG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTATTGGGTTCCAAGCTaGAGCCAGGCCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPYWVPS*SQARVA
Trigger: GGCTACTCTGGCCTGGCTTCAGCTTGGAACCCAATA...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCGGTAGGACAGGAAACTaGTTGGAGGTAACATCCAAC +
Preference number: 4 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSGRTGN*LEVTSN
Trigger: GTTGGATGTTACCTCCAATCAGTTTCCTGTCCTACC...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCACACCTCTTTGTCCTaGACCTTGATGGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEHTSLS*TLMGQR
Trigger: TCGCTGCCCCATCAAGGTTCAGGACAAAGAGGTGTG...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564491.5
CDS-3UTR GCA 90 bp CACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HEGTQTQLLPHGTAPRAAEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGCTGCGTTCTGGGCTaGCTGCTGCACATGTGGATT +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGCVLG*LLHMWI
Trigger: AATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGAAACAGAACAGCTACTaGTTCCAGGAATCCAACGGT +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGKQNSY*FQESNG
Trigger: ACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTGTTT...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCATCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPSGYCA*SQDWAC
Trigger: ACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGA...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGCCATGTTCTCACACTaGTTGGAACAGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSAMFSH*LEQNSP
Trigger: GGGGCTGTTCTGTTCCAAGCAGTGTGAGAACATGGC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGGGAAAGTGCATAGTTaGCTGGAGATGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTGKVHS*LEMQHP
Trigger: GGGATGCTGCATCTCCAGGCAACTATGCACTTTCCC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCTCCGAAACTCCTGGCTaGCAGCAGGGAAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTSETPG*QQGRKC
Trigger: GCACTTCCTTCCCTGCTGCCAGCCAGGAGTTTCGGA...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361900.10
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATGGGATGCCCACGGCCTaGATGATGCTGATGACCAAC +
Preference number: 4 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNGMPTA*MMLMTN
Trigger: GTTGGTCATCAGCATCATCCAGGCCGTGGGCATCCC...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCATCTTCCAGGCCCCTGTaGTCCACTCCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSSSRPL*STPPEL
Trigger: AAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGA...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAECLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTCCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TGGATTCTTCCAGGCCCCTGTGGTCCACTCCTCCTGAGCTTTGCTGAAACTCCCTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: WILPGPCGPLLLSFAETPWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...GGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCACAGGGGCCTGGAAGAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCATGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR CCA 90 bp TGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: CNWGWRNTESEADSWHPGPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...CCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCACCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGCAAGGGAATATCCCTaGCCTGTACCCACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSAREYP*PVPTLP
Trigger: TGGGAGGGTGGGTACAGGCCAGGGATATTCCCTTGC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGATGTTCTCACACTGCTTaGAACAGAACAGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGCSHTA*NRTAPR
Trigger: CCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACA...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCTCAGGCAAGCTTCTaGTGGGAGAAGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTAQASF*WEKGRW
Trigger: CCACCTTCCCTTCTCCCACCAGAAGCTTGCCTGAGC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCAGGGAGCCAAAGTTCTaGGGTAGGGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTREPKF*GRGEEG
Trigger: CCCTTCCTCTCCCCTACCCCAGAACTTTGGCTCCCT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGATCACAGGCCTCCTaGAGCTACCAGAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGSQAS*SYQREK
Trigger: CTTCTCTCTCTGGTAGCTCCAGGAGGCCTGTGATCC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCACATCCAACAGGTCATaGATGCTAGGCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSTSNRS*MLGREL
Trigger: CAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGT...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAAGCTCAACTGCCAGCTaGGGAACATCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPSSTAS*GTSSSR
Trigger: TCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGTGGTCCACTCCTCCTaGGCTTTGCTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIVVHSS*ALLKLP
Trigger: GGGGAGTTTCAGCAAAGCTCAGGAGGAGTGGACCAC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: AGSHLIGVRVIGGGGILSRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...ACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGGGACCAATCATTACTaGCATGCCCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSGTNHY*HALCSS
Trigger: GCTGGAGCAGAGGGCATGTCAGTAATGATTGGTCCC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACACCTTCCTACAAAGATaGATGTGTGCCCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHTFLQR*MCALPP
Trigger: TGGGGGCAGGGCACACATTCATCTTTGTAGGAAGGT...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGACCTTCCTACAAAGATaGATGTGTGCCCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPTFLQR*MCALPP
Trigger: TGGGGGCAGGGCACACATTCATCTTTGTAGGAAGGT...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GACACAGACACAGCTACTACCGCACGGGACAGCTCCACGTGCAGCCCACAGCTGGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DTDTATTARDSSTCSPQLEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...CAGCTGTGGGCTGCACGTGGAGCTGTCCCGTGCGGTAGTAGCTGTGTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGGCTGCCCCCATGGCTaGGTTCTGGGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETGCPHG*VLGCLL
Trigger: CAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCC...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVGVAGSHLIGVRVIGGGTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...GCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCCGAGAGATACCTAAATaGCTCACTGTGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSREIPK*LTVLEP
Trigger: TGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCG...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGGGCCTGTGCTTCTaGTTGGGCCCTGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASLGLCF*LGPEFK
Trigger: CTTGAACTCAGGGCCCAAGCAGAAGCACAGGCCCAG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAATAGTTGCCTGGAGATaGAGCATCCCAGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: NPTVTERYLNASLCWSQPIVAWR*SIPGPE
Trigger: TTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTAT...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACTACCCATACATCTTTaGAAGTTTCCACGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPLPIHL*KFPRGR
Trigger: TCTACCACGTGGAAACTTGCAAAGATGTATGGGTAG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR CCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTATCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TCCCAATGGCCCCAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQWPQLCHLVGVAGSHLIWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...AATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTGGGGCCATTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGCCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCTGGGCAGATGCTCTTTaGGCGAGAACCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCWADAL*ARTHSP
Trigger: AGGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCA...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCACATCCAACAGGTCATaGATGCTAGGCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSTSNRS*MLGREL
Trigger: CAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGT...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGACATCCAACAGGTCATaGATGCTAGGCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPTSNRS*MLGREL
Trigger: CAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGT...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
3UTR CAA 72 bp AAGCCAGGCCAGAGTAGCCAAGTGGGGTTTGGATTTTaGTCCAAACAGCTCAGGCAAGCTTCTGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KPGQSSQVGFGF*SKQLRQASGGR
Trigger: TCTCCCACCAGAAGCTTGCCTGAGCTGTTTGGACAAAAATCCAAACCCCACTTGGCTACTCTGGCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCATCACTTTCTCTGCCATaGTGTTACCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSSLSLP*CYQLAQ
Trigger: CTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGA...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATAT +
Preference number: 4 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIGAWSC*HAGEEY
Trigger: ATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EKTAITVNMTVGISITTALGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...GGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAAGGTACCAGGGACTGTaGCCATTGCTCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASRYQGL*PLLPRE
Trigger: CTCTCTTGGGAGCAATGGTCACAGTCCCTGGTACCT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp TGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTGGGCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: CNWGWRNTESEADSWHPGLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...CCCAGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568081.1
ENST00000568423.5
CDS-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAGGGAAGGGGGAACCCTaGTTGGTAACCACAAATGAC +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGGKGEP*LVTTND
Trigger: GTCATTTGTGGTTACCAAGCAGGGTTCCCCCTTCCC...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACATACCCAGGTGGGCTCTaGACCCCCAGCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETYPGGL*TPSCVP
Trigger: GGGCACACAGCTGGGGGTGCAGAGCCCACCTGGGTA...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCCTAAATGCCTCACTGTaGTGGAGCCAGCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTLNASL*WSQPDL
Trigger: AAGGTCTGGCTGGCTCCAGCACAGTGAGGCATTTAG...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCACTAAATGCCTCACTGTaGTGGAGCCAGCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSLNASL*WSQPDL
Trigger: AAGGTCTGGCTGGCTCCAGCACAGTGAGGCATTTAG...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCCGAGAGATACCTAAATaGCTCACTGTGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSREIPK*LTVLEP
Trigger: TGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCG...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCATCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASSGYCA*SQDWAC
Trigger: ACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGA...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAAGGCGAGGCCAAAGTTaGTGGCTCCCCCGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETRRGQS*WLPRLR
Trigger: TCGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCT...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RAMKEKTAITVNMTVGISCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...GCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MKEKTAITVNMTVGISITSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...GGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMTCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ATGTTCTCACACTGCTTGGAACAGAACAGCCCCACGGGCCTAAAACCACTCTCCTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: MFSHCLEQNSPTGLKPLSWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...GGAGAGTGGTTTTAGGCCCGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGCCAATGTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: AITVNMTVGISITTAEPMWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...CATTGGCTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGTGGAGTACGTGTAATTaGGGGTGGCGGAATACTGAG +
Preference number: 4 (lower is better)
Translates to: KTAITVNMTVGISITTAEWSTCN*GWRNTE
Trigger: CTCAGTATTCCGCCACCCCCAATTACACGTACTCCA...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: APQETSTAHYFTRGHRHSEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGCTCAGGCAAGCTTCTaGTGGGAGAAGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVAQASF*WEKGRW
Trigger: CCACCTTCCCTTCTCCCACCAGAAGCTTGCCTGAGC...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAAGGGAGCCAAAGTTCTaGGGTAGGGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVREPKF*GRGEEG
Trigger: CCCTTCCTCTCCCCTACCCCAGAACTTTGGCTCCCT...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGTAGAGCCAGAGCATaGCCATATAGGTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGRARA*PYRSKP
Trigger: TGGCTTGGACCTATATGGCCATGCTCTGGCTCTACC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGGCAAAGCAGGTCACTaGGACCCCAGAACTGACCTG +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVGKAGH*DPRTDL
Trigger: CAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAAGGAGCTGTCAGTCTTaGAGGCCTTGTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASRSCQS*RPCKWA
Trigger: GGCCCATTTACAAGGCCTTCAAGACTGACAGCTCCT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCCTTTACATCTaGCAACTGCCCAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASLCLYI*QLPSMS
Trigger: GGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TCNWGWRNTESEADSWHPLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTGGGCAAGGGAAGATTaGACAGGGAATGTGACATCA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPWARED*TGNVTS
Trigger: TGATGTCACATTCCCTGTGCAATCTTCCCTTGCCCA...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACACCTCTCACTGGGCCCTaGCTGCCTTCTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETPLTGP*LPSPLT
Trigger: GGTCAGAGGAGAAGGCAGGCAGGGCCCAGTGAGAGG...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACCATTCAGGCTATTGTaGTTGCAGCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVPFRLL*LQPGLG
Trigger: GCCCAGTCCTGGCTGCAAGCACAATAGCCTGAATGG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCATGGGAAATGGGCAGATaGTCTTTGGGCGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASWEMGR*SLGENP
Trigger: TGGGTTCTCGCCCAAAGAGCATCTGCCCATTTCCCA...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCGATGAATGTGTGCCCTaGCCCCACTTCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCDECVP*PHFSYW
Trigger: CCAGTATGAGAAGTGGGGGCAGGGCACACATTCATC...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAGATGAATGTGTGCCCTaGCCCCACTTCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASDECVP*PHFSYW
Trigger: CCAGTATGAGAAGTGGGGGCAGGGCACACATTCATC...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCACCTTCCAAGTTTAAGTaGATAATGGACAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPPSKFK*IMDRRH
Trigger: ATGTCTTCTGTCCATTATGCACTTAAACTTGGAAGG...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR CCA 90 bp AGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCGTCATGCTGACATGCTaGGGAGGAATATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RAMKEKTAITVNMTVGISVMLTC*GGISAS
Trigger: CGAGGCAGATATTCCTCCCCAGCATGTCAGCATGAC...GCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGACGTGTAATTGGGGGTaGCGGAATACTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GWFTSHWSTCNWGWRNTETCNWG*RNTESE
Trigger: CTCAGACTCAGTATTCCGCCACCCCCAATTACACGT...CTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACATGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp TGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTCCACAAATGACGATGTaGCTTGAGCCCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WFTSHWSTCNWGWRNTESPQMTM*LEPPVP
Trigger: TGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG...AGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGTAGGGAGTTCCGACTaGGTGAGGACAAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVVGSSD*VRTSQD
Trigger: GTCTTGGCTTGTCCTCACCCAGTCGGAACTCCCTAC...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGGATCACAGGCCTCCTaGAGCTACCAGAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVGSQAS*SYQREK
Trigger: CTTCTCTCTCTGGTAGCTCCAGGAGGCCTGTGATCC...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASKCIVA*RCSIPG
Trigger: CCCTGGGATGCTGCATCTCCAGGCAACTATGCACTT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CCACCTGGCACATGGTGGGGTCAGGGTAGCAGAATCAAGCCACAGCAACTGGGGTGTTCCCCTTTATTATaGTTCACTCAGTTACCAAAG +
Preference number: 4 (lower is better)
Translates to: PPGTWWGQGSRIKPQQLGCSPLL*FTQLPK
Trigger: CTTTGGTAACTGAGTGAACCATAATAAAGGGGAACA...CCCCAGTTGCTGTGGCTTGATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGCTCACGTCCCAGGGGTaGACGGGGGTCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLLTSQG*TGVREP
Trigger: AGGCTCCCGGACCCCCGTCCACCCCTGGGACGTGAG...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS-3UTR TCA 90 bp TCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACCCCATCAGCTTCCTTaGACTGTAAATCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: STAHYFTRGHRHSYYRTGPHQLP*TVNQIR
Trigger: TCTAATCTGATTTACAGTTCAAGGAAGCTGATGGGG...TCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGTAGGACAGGAAACTaGTTGGAGGTAACATCCAAC +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTGRTGN*LEVTSN
Trigger: GTTGGATGTTACCTCCAATCAGTTTCCTGTCCTACC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACGAGAGATACCTAAATaGCTCACTGTGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASREIPK*LTVLEP
Trigger: TGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCACCAGGACTGGGCCTGTaGTTCTGCTTGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPPGLGL*FCLGPE
Trigger: CTCAGGGCCCAAGCAGAAGCACAGGCCCAGTCCTGG...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCAGGCGAGGCCAAAGTTaGTGGCTCCCCCGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVRRGQS*WLPRLR
Trigger: TCGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCT...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGCTTGCAGCCAGGACTaGGCCTGTGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETACSQD*ACASAW
Trigger: CCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGC...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACACGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCACCAGTCTTTCTGCTATaGCTCCCCTGGCCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPPVFLL*LPWPRE
Trigger: CTCACGGGGCCAGGGGAGGCATAGCAGAAAGACTGG...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR GCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCAAACAGAACAGCTACTaGTTCCAGGAATCCAACGGT +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTKQNSY*FQESNG
Trigger: ACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTGTTT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCCTCTCACTGGGCCCTaGCTGCCTTCTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVPLTGP*LPSPLT
Trigger: GGTCAGAGGAGAAGGCAGGCAGGGCCCAGTGAGAGG...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTCCTCTCACTGGGCCCTaGCTGCCTTCTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPPLTGP*LPSPLT
Trigger: GGTCAGAGGAGAAGGCAGGCAGGGCCCAGTGAGAGG...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAACAAAGATGAATGTGTaGCCTGCCCCCACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TATASRNPTVTERYLNASTKMNV*PAPTSH
Trigger: ATGAGAAGTGGGGGCAGGGCACACATTCATCTTTGT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCACCCATGGCTGCGTTCTaGGCTGCCTGCTGCACATGT +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPPMAAF*AACCTC
Trigger: ACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGG...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp TGGAGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: WSTCNWGWRNTESEADSWWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...CCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACACCACCTGGCACATGGTaGGGTCAGGGTAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETPPGTW*GQGSRI
Trigger: GATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAATGCCACCTGGCACATaGTGGGGTCAGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETMPPGT*WGQGSR
Trigger: TCTGCTACCCTGACCCCACCATGTGCCAGGTGGCAT...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGCTCAGGCAAGCTTCTaGTGGGAGAAGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETAQASF*WEKGRW
Trigger: CCACCTTCCCTTCTCCCACCAGAAGCTTGCCTGAGC...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCACCCCATCAGCTTCCTTaGACTGTAAATCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSPHQLP*TVNQIR
Trigger: TCTAATCTGATTTACAGTTCAAGGAAGCTGATGGGG...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAAGGTACCAGGGACTGTaGCCATTGCTCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETRYQGL*PLLPRE
Trigger: CTCTCTTGGGAGCAATGGTCACAGTCCCTGGTACCT...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLAGPVA*PHLFVL
Trigger: CAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000568423.5
CDS-3UTR GCA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTACTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVLGRNI*LEVLVE
Trigger: TTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAG...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CAGAACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCAAACAGAACAGCTACTaGTTCCAGGAATCCAACGGT +
Preference number: 4 (lower is better)
Translates to: QNSYCFQESNGHREIPKCKQNSY*FQESNG
Trigger: ACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTGTTT...GCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTGGCCCTGAGTTCAAGTaGCCAGAACCGCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPGPEFK*PEPPCD
Trigger: GTCACAGGGCGGTTCTGGGCACTTGAACTCAGGGCC...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACATCAGGCTATTGTGCTTaGAGCCAGGACTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETSGYCA*SQDWAC
Trigger: ACAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGA...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ATGCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: MLRAMKEKTAITVNMTVGVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...TCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: KRPPLHTISRGDTDTATTVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTCTGAGGCTGATTCATaGCACCCTGGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPSEADS*HPGLPP
Trigger: TGGGGGCAGCCCAGGGTGCCATGAATCAGCCTCAGA...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR TCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTCGTGCAGCCCACAGCTaGGTGCCAAGAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPRAAHS*VPRAES
Trigger: AGATTCTGCTCTTGGCACTCAGCTGTGGGCTGCACG...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACACTGTGCCTTTACATCTaGCAACTGCCCAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETLCLYI*QLPSMS
Trigger: GGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAG...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGATGAATGTGTGCCCTaGCCCCACTTCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: TTKSAKYCYFPGRLKVETDECVP*PHFSYW
Trigger: CCAGTATGAGAAGTGGGGGCAGGGCACACATTCATC...TGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCATGATGTTACCAGCTaGCCCAGTGGCCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVHDVTS*PSGLPT
Trigger: TGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATG...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCATGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGCTTGCAGCCAGGACTaGGCCTGTGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLACSQD*ACASAW
Trigger: CCAAGCAGAAGCACAGGCCCAGTCCTGGCTGCAAGC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGTGTTCCCCTTTATTATaGTTCACTCAGTTACCAAAG +
Preference number: 4 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPCSPLL*FTQLPK
Trigger: CTTTGGTAACTGAGTGAACCATAATAAAGGGGAACA...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCAGGTACCAGGGACTGTaGCCATTGCTCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVRYQGL*PLLPRE
Trigger: CTCTCTTGGGAGCAATGGTCACAGTCCCTGGTACCT...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCAACCTTCCTACAAAGATaGATGTGTGCCCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPTFLQR*MCALPP
Trigger: TGGGGGCAGGGCACACATTCATCTTTGTAGGAAGGT...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTGCCTGCTGCACATGTaGATTCTTCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPCLLHM*ILPGPC
Trigger: ACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCA...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTGGTGGGGGTGGGGGCTaGTTTAGCTCTAAACACACA +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPGGGGG*FSSKHT
Trigger: TGTGTGTTTAGAGCTAAACCAGCCCCCACCCCCACC...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGCCACCTGGCACATGGTaGGGTCAGGGTAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLPPGTW*GQGSRI
Trigger: GATTCTGCTACCCTGACCCCACCATGTGCCAGGTGG...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGAATGCCTCACTGTGCTaGAGCCAGCCAGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLNASLC*SQPDLP
Trigger: GGGAAGGTCTGGCTGGCTCCAGCACAGTGAGGCATT...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTATGGCTTCAGCGGGATaGATTTGGGCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPMASAG*IWAMVG
Trigger: TCCCACCATTGCCCAAATTCATCCCGCTGAAGCCAT...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR TCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTCTTGGTAACCACAAATaGCGATGTGGCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPLGNHK*RCGLSP
Trigger: GGGGCTCAAGCCACATCGTCATTTGTGGTTACCAAG...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCGCCATGTTCTCACACTaGTTGGAACAGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVAMFSH*LEQNSP
Trigger: GGGGCTGTTCTGTTCCAAGCAGTGTGAGAACATGGC...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTATAGTTGCCTGGAGATaGAGCATCCCAGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPIVAWR*SIPGPE
Trigger: TTCAGGCCCTGGGATGCTGCATCTCCAGGCAACTAT...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTGGGAAAGTGCATAGTTaGCTGGAGATGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPGKVHS*LEMQHP
Trigger: GGGATGCTGCATCTCCAGGCAACTATGCACTTTCCC...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp ATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: MKEKTAITVNMTVGISITEFGQW*EVVHFL
Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...GGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGAAGGAGGCGAGGCCTaGAGGGATCAAAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLEGGEA*RDQKSK
Trigger: CTTGCTCTTTTGATCCCTCCAGGCCTCGCCTCCTTC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCGGTAGAGCCAGAGCATaGCCATATAGGTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVGRARA*PYRSKP
Trigger: TGGCTTGGACCTATATGGCCATGCTCTGGCTCTACC...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPKCIVA*RCSIPG
Trigger: CCCTGGGATGCTGCATCTCCAGGCAACTATGCACTT...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp ATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCGAAGGTAAAGAAGAATaGCATGAAACTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: MKEKTAITVNMTVGISITEGKEE*HETEGA
Trigger: AGCTCCTTCAGTTTCATGGCATTCTTCTTTACCTTC...GGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTTTACATCTGACAACTaGCCAGCATGTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPFTSDN*PACPSS
Trigger: GGAGCTGGGACATGCTGGGCAGTTGTCAGATGTAAA...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGCCTGGTAGGCGTGGCTaGTTCACATCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLPGRRG*FTSHWS
Trigger: ACTCCAATGAGATGTGAACCAGCCACGCCTACCAGG...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCACTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
CDS-3UTR CCA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCAGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR GCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGACAAGAGACCTCCACTaGACACTATTTCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLTRDLH*TLFHEG
Trigger: CCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGT...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR GCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTACAAAGATGAATGTGTaGCCTGCCCCCACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPTKMNV*PAPTSH
Trigger: ATGAGAAGTGGGGGCAGGGCACACATTCATCTTTGT...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR TCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGATTGCACAGGGAATGTaGCATCAGGGAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLIAQGM*HQGTDE
Trigger: CTCATCTGTTCCCTGATGTCACATTCCCTGTGCAAT...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTGGTTCACATCTCATTaGAGTACGTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPWFTSH*STCNWG
Trigger: CCCCCAATTACACGTACTCCAATGAGATGTGAACCA...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGCTGAAAGGTGGGGGCTaGGGTACAGACATATACATA +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLLKGGG*GTDIYI
Trigger: TATGTATATGTCTGTACCCCAGCCCCCACCTTTCAG...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGAGATAGACAGACCATaGGCAAGGGAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLEIDRP*AREDCT
Trigger: TGTGCAATCTTCCCTTGCCCATGGTCTGTCTATCTC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CCA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLVLVET*LQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGAC...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CCA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTTGTTCCCCTTTATTATaGTTCACTCAGTTACCAAAG +
Preference number: 4 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPCSPLL*FTQLPK
Trigger: CTTTGGTAACTGAGTGAACCATAATAAAGGGGAACA...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS GCA 90 bp GCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTGAGCTaGGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCCGCGAGCCGC +
Preference number: 5 (lower is better)
Translates to: AAAVRLPKGRSAALS*AAPERCGAEPAASR
Trigger: GCGGCTCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000565923.5
ENST00000567920.5
ENST00000568018.5
CDS GCA 90 bp GGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTGAGCTGCGCTaGACCCGAGCGATGCGGCGCGGAGCCGGCCGCGAGCCGCTCCGG +
Preference number: 5 (lower is better)
Translates to: GRSAAERPQRCAELR*TRAMRRGAGREPLR
Trigger: CCGGAGCGGCTCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000565923.5
ENST00000567920.5
ENST00000568018.5
CDS TCA 90 bp CGTCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTaGGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: RLPRPFGCRKAAALR*AALHPSDAARSRPR
Trigger: TCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568018.5
CDS TCA 90 bp GAACTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTaGGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: ELPRPFGCRKAAALR*AALHPSDAARSRPR
Trigger: TCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGTTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
CDS TCA 90 bp GTTCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTaGGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: VLPRPFGCRKAAALR*AALHPSDAARSRPR
Trigger: TCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGAAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562327.5
CDS TCA 90 bp AACCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTaGGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: NLPRPFGCRKAAALR*AALHPSDAARSRPR
Trigger: TCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGGTT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567920.5
CDS GCA 90 bp TCGGGGTTCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTaGGCTGAGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: SGFCRGRSAAERPQR*AELRCTRAMRRGAG
Trigger: GCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGAACCCCGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562327.5
CDS GCA 90 bp GACTCCGTCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTaGGCTGAGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: DSVCRGRSAAERPQR*AELRCTRAMRRGAG
Trigger: GCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGACGGAGTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568018.5
CDS TCA 90 bp GTGGCCTGGGCCAGCGCGCCCGTCGCCTCGCAACCCTGGGGCGGCTaGGGTCCGCCATCCAAAGGTCGGCCGCCCGAGGGAGGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: VAWASAPVASQPWGG*GPPSKGRPPEGGEG
Trigger: TCCCTCACCTCCCTCGGGCGGCCGACCTTTGGATGGCGGACCTCAGCCGCCCCAGGGTTGCGAGGCGACGGGCGCGCTGGCCCAGGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS TCA 90 bp GACGGGGGTCCGGGAGCCTCGAGCTCCGGGCAGGCGTGGCGAGGCTaGAGTCTGGGTCTTCCGCGCCCCGCGAGGACCACGCCGCGACGT +
Preference number: 5 (lower is better)
Translates to: DGGPGASSSGQAWRG*SLGLPRPARTTPRR
Trigger: ACGTCGCGGCGTGGTCCTCGCGGGGCGCGGAAGACCCAGACTTCAGCCTCGCCACGCCTGCCCGGAGCTCGAGGCTCCCGGACCCCCGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS GCA 90 bp GTCCTGAACTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTaGGCTGAGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: VLNCRGRSAAERPQR*AELRCTRAMRRGAG
Trigger: GCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGTTCAGGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
CDS CCA 90 bp GGCGCCCCCAACTCACCACCCAAAGCCCTGATGGAGCCCGCCTGGTaGCCTGGGCCAGCGCGCCCGTCGCCTCGCAACCCTGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GAPNSPPKALMEPAW*PGPARPSPRNPGAA
Trigger: AGCCGCCCCAGGGTTGCGAGGCGACGGGCGCGCTGGCCCAGGCCACCAGGCGGGCTCCATCAGGGCTTTGGGTGGTGAGTTGGGGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565989.5
ENST00000568119.5
CDS CCA 90 bp TCCGGCGCCCCCAACTCACCACCCAAAGCCCTGATGGAGCCCGCCTaGTGGCCTGGGCCAGCGCGCCCGTCGCCTCGCAACCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: SGAPNSPPKALMEPA*WPGPARPSPRNPGA
Trigger: CGCCCCAGGGTTGCGAGGCGACGGGCGCGCTGGCCCAGGCCACCAGGCGGGCTCCATCAGGGCTTTGGGTGGTGAGTTGGGGGCGCCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565989.5
ENST00000568119.5
CDS CCA 90 bp GCGAGGACCACGCCGCGACGTAATCGCCCGCGGGGAGGCGCGGAGTaGAGCCGCAGCCAGCTCCTCCCGCACTCTGCTGACCGCGCACTA +
Preference number: 5 (lower is better)
Translates to: ARTTPRRNRPRGGAE*SRSQLLPHSADRAL
Trigger: TAGTGCGCGGTCAGCAGAGTGCGGGAGGAGCTGGCTGCGGCTCCACTCCGCGCCTCCCCGCGGGCGATTACGTCGCGGCGTGGTCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS CCA 90 bp GTCCGGGAGCCTCGAGCTCCGGGCAGGCGTGGCGAGGCTGAAGTCTaGGTCTTCCGCGCCCCGCGAGGACCACGCCGCGACGTAATCGCC +
Preference number: 5 (lower is better)
Translates to: VREPRAPGRRGEAEV*VFRAPRGPRRDVIA
Trigger: GGCGATTACGTCGCGGCGTGGTCCTCGCGGGGCGCGGAAGACCCAGACTTCAGCCTCGCCACGCCTGCCCGGAGCTCGAGGCTCCCGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS TCA 90 bp GGGCGGCTGAGGTCCGCCATCCAAAGGTCGGCCGCCCGAGGGAGGTaGGGGAAGTCAACCCGGGTCCACCTGCAGGCGCTAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GRLRSAIQRSAARGR*GKSTRVHLQALVGR
Trigger: CCTTCCAACTAGCGCCTGCAGGTGGACCCGGGTTGACTTCCCTCACCTCCCTCGGGCGGCCGACCTTTGGATGGCGGACCTCAGCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS-3UTR CAA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCAAGGCGAGGCCAAAGTaGGTGGCTCCCCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: QLITLGRGQSFCYASPGPKARPK*VAPPPP
Trigger: CGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCTT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS CCA 90 bp AGGGAGGTGAGGGAAGTCAACCCGGGTCCACCTGCAGGCGCTAGTTaGAAGGAAAGGCCCAAAGGAAGCCACGGGCACCCCCTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: REVREVNPGPPAGAS*KERPKGSHGHPLPV
Trigger: GACTGGAAGGGGGTGCCCGTGGCTTCCTTTGGGCCTTTCCTTCCAACTAGCGCCTGCAGGTGGACCCGGGTTGACTTCCCTCACCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS-3UTR CAA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGGCCTGTGCTTCTGCTaGGGCCCTGAGTTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPGLCFC*GPEFKC
Trigger: GCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGCC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CACCAGGAGAATGGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTATGGGCAGATGCTCTTaGGGCGAGAACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: HQENGKAGHWDPRTDLGPMGRCS*GENPLP
Trigger: GGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCAT...AGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCCATTCTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS TCA 90 bp CACCTCTTTGTCCTGAACTCCATCCTCGTGACCTCCGGCCAGCGTTaGAATGAGCCAAATCCGGCGCCCCCAACTCACCACCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: HLFVLNSILVTSGQR*NEPNPAPPTHHPKP
Trigger: GGGCTTTGGGTGGTGAGTTGGGGGCGCCGGATTTGGCTCATTTCAACGCTGGCCGGAGGTCACGAGGATGGAGTTCAGGACAAAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565989.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGCCGCGGCCGTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNCRGRSAA
Trigger: GGCAGCCGAACGGCCGCGGCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
CDS-3UTR CAA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAAGGCGAGGCCAAAGTaGGTGGCTCCCCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHKARPK*VAPPPP
Trigger: CGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCTT...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCGGCCTGTGCTTCTGCTaGGGCCCTGAGTTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSGLCFC*GPEFKC
Trigger: GCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGCC...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCTTCAGGCTATTGTGCTaGCAGCCAGGACTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QLITLGRGQSFCYASPGPFRLLC*QPGLGL
Trigger: CAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAA...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS TCA 90 bp CTTTGTCCTGAACTCCATCCTCGTGACCTCCGGCCAGCGTTGAAATaGGCCAAATCCGGCGCCCCCAACTCACCACCCAAAGCCCTGATG +
Preference number: 5 (lower is better)
Translates to: LCPELHPRDLRPALK*AKSGAPNSPPKALM
Trigger: CATCAGGGCTTTGGGTGGTGAGTTGGGGGCGCCGGATTTGGCTCATTTCAACGCTGGCCGGAGGTCACGAGGATGGAGTTCAGGACAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565989.5
CDS-3UTR CAA 90 bp GGCAAAGCAGGTCACTGGGACCCCAGAACTGACCTGGGCCCTCCTTCACCCGACGGCAATGGTGGGAAGTaGTTCACTTTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: GKAGHWDPRTDLGPPSPDGNGGK*FTFSAM
Trigger: CATGGCAGAGAAAGTGAACAACTTCCCACCATTGCC...GTCGGGTGAAGGAGGGCCCAGGTCAGTTCTGGGGTCCCAGTGACCTGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp ATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACGGCCTGGATGATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: MVAIQPQTPQPGMPTAWMICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...CATCCAGGCCGTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR CAA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCATGTTCTCACACTGCTaGGAACAGAACAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPMFSHC*EQNSPT
Trigger: CGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCATGTTCTCACACTGCTaGGAACAGAACAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: QLITLGRGQSFCYASPGPMFSHC*EQNSPT
Trigger: CGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGCCCGGCATCTGTTCTaGGTCGGGGTTCTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIARHLF*VGVLPR
Trigger: CCGCGGCAGAACCCCGACCAAGAACAGATGCCGGGC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564491.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACCTTGATGGGGCAGCGACTGGG +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNLDGAATG
Trigger: CCCAGTCGCTGCCCCATCAAGGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562327.5
ENST00000564491.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGGGCGTGGTGGCATGTGCCT +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNWAWWHVP
Trigger: AGGCACATGCCACCACGCCCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566872.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
CDS-3UTR CAA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGGCAATGGTGGGAAGTaGTTCACTTTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPGNGGK*FTFSAM
Trigger: CATGGCAGAGAAAGTGAACAACTTCCCACCATTGCC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp TGGGCTGCCCCCATGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: WAAPMAAFWAACCTCGFFICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...GAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCATGGGGGCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp GAAGAAGGAGATGGTAGCAATCCAGCCGCAGACGCCCCAGCCTGGGATGCCCACATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: EEGDGSNPAADAPAWDAHICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...GTGGGCATCCCAGGCTGGGGCGTCTGCGGCTGGATTGCTACCATCTCCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000568423.5
CDS-3UTR CAA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAATGGGCAAGGGAAGATaGCACAGGGAATGTGACATC +
Preference number: 5 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPMGKGR*HRECDI
Trigger: GATGTCACATTCCCTGTGCAATCTTCCCTTGCCCAT...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCCATGGGCAAGGGAAGATaGCACAGGGAATGTGACATC +
Preference number: 5 (lower is better)
Translates to: QLITLGRGQSFCYASPGPMGKGR*HRECDI
Trigger: GATGTCACATTCCCTGTGCAATCTTCCCTTGCCCAT...GGGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCAGGCCTGTGCTTCTGCTaGGGCCCTGAGTTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: NPTVTERYLNASLCWSQPGLCFC*GPEFKC
Trigger: GCACTTGAACTCAGGGCCCAAGCAGAAGCACAGGCC...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCATCCCATTCAGGCTATaGTGCTTGCAGCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSIPFRL*CLQPGL
Trigger: CAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGAT...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACACCCAAAGCCCTGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNTQSPDGA
Trigger: GGCTCCATCAGGGCTTTGGGTGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564141.1
CDS-3UTR CAA 90 bp CCGGGATCAGGCTTCCCAAGGGTAGAGCCAGAGCATGGCCATATAGGTCCAAGCTTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PGSGFPRVEPEHGHIGPSFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...GCTTGGACCTATATGGCCATGCTCTGGCTCTACCCTTGGGAAGCCTGATCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CAGCTCAACTGCCAGCTGGGGAACATCCAGCTCCAGAAACAGGGAGCAGCAGCGATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: QLNCQLGNIQLQKQGAAAICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...CGCTGCTGCTCCCTGTTTCTGGAGCTGGATGTTCCCCAGCTGGCAGTTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACTTCAGGCTATTGTGCTaGCAGCCAGGACTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHFRLLC*QPGLGL
Trigger: CAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAA...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAATGGGCAGATGCTCTTaGGGCGAGAACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSMGRCS*GENPLP
Trigger: GGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCAT...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CCAGCTCATAACCCTAGGAAGGGGCCAGTCTTTCTGCTATGCCTCCCCTGGCCCGTGGGGTTTGGATTTTaGTCCAAACAGCTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: PAHNPRKGPVFLLCLPWPVGFGF*SKQLRQ
Trigger: TTGCCTGAGCTGTTTGGACAAAAATCCAAACCCCAC...GGGCCAGGGGAGGCATAGCAGAAAGACTGGCCCCTTCCTAGGGTTATGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CCACAAATGACGATGTGGCTTGAGCCCCCTGTCCCAATGGCCCCAGCTCTGCCAGTGGGGTTTGGATTTTaGTCCAAACAGCTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: PQMTMWLEPPVPMAPALPVGFGF*SKQLRQ
Trigger: TTGCCTGAGCTGTTTGGACAAAAATCCAAACCCCAC...TGGCAGAGCTGGGGCCATTGGGACAGGGGGCTCAAGCCACATCGTCATTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp TGGCTGCGTTCTGGGCTGCCTGCTGCACATGTGGATTCTTCCAGGCCCCTGTGGTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: WLRSGLPAAHVDSSRPLWYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...CCACAGGGGCCTGGAAGAATCCACATGTGCAGCAGGCAGCCCAGAACGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp GCCCTCTGCTCCAGCTGTGCCTTTACATCTGACAACTGCCCAGCATGTCCCAGCGTAGCCAAGTGGGGTTaGGATTTTTGTCCAAACAGC +
Preference number: 5 (lower is better)
Translates to: ALCSSCAFTSDNCPACPSVAKWG*DFCPNS
Trigger: GCTGTTTGGACAAAAATCCAAACCCCACTTGGCTAC...GCTGGGACATGCTGGGCAGTTGTCAGATGTAAAGGCACAGCTGGAGCAGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACGCCTTTTCAGAAGAGGTCACG +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNAFSEEVT
Trigger: CGTGACCTCTTCTGAAAAGGCGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS-3UTR CAA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACATTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: APQETSTAHYFTRGHRHSFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS TCA 90 bp GAGCTGTCAGTCACATCCAGAGGTAGTAGAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATATCTGCCTCGAAGTCTTGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: ELSVTSRGSRGAWSC*HAGEEYLPRSLGRN
Trigger: GTTTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCCTCTACTACCTCTGGATGTGACTGACAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS GCA 90 bp TTGTTCACTTTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGCTGTATCACACTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LFTFSAMMLPAGPVA*PHLFVLNCCITLPP
Trigger: TGGAGGAAGTGTGATACAGCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361900.10
CDS-3UTR CAA 90 bp CTAGCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACGGCAATGGTGGGAAGTaGTTCACTTTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LAPQETSTAHYFTRGHRHGNGGK*FTFSAM
Trigger: CATGGCAGAGAAAGTGAACAACTTCCCACCATTGCC...GTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CAA 90 bp ACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACCCTTTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TCNWGWRNTESEADSWHPFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...AGGGTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp GCACCACAAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: APQETSTAHYFTRGHRHSICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...GCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTTGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
CDS-3UTR CAA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 5 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp AAGACGGCCATCACTGTGAACATGACAGTGGGAATTAGCATCACCACCGCCGAGAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 5 (lower is better)
Translates to: KTAITVNMTVGISITTAEKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...CTCGGCGGTGGTGATGCTAATTCCCACTGTCATGTTCACAGTGATGGCCGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp AGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGATGGGCAAGGGAAGATaGCACAGGGAATGTGACATC +
Preference number: 5 (lower is better)
Translates to: RDLHCTLFHEGTQTQLLPMGKGR*HRECDI
Trigger: GATGTCACATTCCCTGTGCAATCTTCCCTTGCCCAT...CGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAATCCCATTCAGGCTATaGTGCTTGCAGCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSIPFRL*CLQPGL
Trigger: CAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGAT...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCATGTTCTCACACTGCTaGGAACAGAACAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: KRPPLHTISRGDTDTATTMFSHC*EQNSPT
Trigger: CGTGGGGCTGTTCTGTTCCAAGCAGTGTGAGAACAT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCGCACGGGACAGTAGCCAAGTGGGGTTaGGATTTTTGTCCAAACAGC +
Preference number: 5 (lower is better)
Translates to: HCTLFHEGTQTQLLPHGTVAKWG*DFCPNS
Trigger: GCTGTTTGGACAAAAATCCAAACCCCACTTGGCTAC...TGTCCCGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AGTACGTGTAATTGGGGGTGGCGGAATACTGAGTCTGAGGCTGATTCATGGCACTTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: STCNWGWRNTESEADSWHFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...GTGCCATGAATCAGCCTCAGACTCAGTATTCCGCCACCCCCAATTACACGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp AGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTAATTGGGGGTGGCGGAATATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RRGWFTSHWSTCNWGWRNICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...ATTCCGCCACCCCCAATTACACGTACTCCAATGAGATGTGAACCAGCCACGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCAAGGCGAGGCCAAAGTaGGTGGCTCCCCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVKARPK*VAPPPP
Trigger: CGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCTT...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AAGAGACCTCCACTGCACACTATTTCACGAGGGGACACAGACACAGCTACTACCAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 5 (lower is better)
Translates to: KRPPLHTISRGDTDTATTKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...GGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGTGTGCAGTGGAGGTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS GCA 90 bp GTAGTAGAGGCGCTTGGTCATGCTGACATGCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAAACATGGCTTCAGCGGGATGAATTT +
Preference number: 5 (lower is better)
Translates to: VVEALGHADMLGRNI*LEVLVETWLQRDEF
Trigger: AAATTCATCCCGCTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCCTCTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567529.1
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS-3UTR CAA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTGGCAATGGTGGGAAGTaGTTCACTTTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIGNGGK*FTFSAM
Trigger: CATGGCAGAGAAAGTGAACAACTTCCCACCATTGCC...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp CTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTTTCAGCGGGATGAATTaGGGCAATGGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LRAMKEKTAITVNMTVGIFSGMN*GNGGKL
Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCGCTGAA...AATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562765.5
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp CAGCTCTGCCACCTGGTAGGCGTGGCTGGTTCACATCTCATTGGAGTACGTGTATATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QLCHLVGVAGSHLIGVRVYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...TACACGTACTCCAATGAGATGTGAACCAGCCACGCCTACCAGGTGGCAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp CTGATTGGAGGTAACATCCAACAGGTCATGGATGCTAGGCAGGGAGCTGGATCAGTGGGGTTTGGATTTTaGTCCAAACAGCTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LIGGNIQQVMDARQGAGSVGFGF*SKQLRQ
Trigger: TTGCCTGAGCTGTTTGGACAAAAATCCAAACCCCAC...TGATCCAGCTCCCTGCCTAGCATCCATGACCTGTTGGATGTTACCTCCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp ACAGCTACTGCTTCCAGGAATCCAACGGTCACCGAGAGATACCTAAATGCCTCAATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: TATASRNPTVTERYLNASICLEV*VETWLQ
Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAT...TGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATTCCTGGAAGCAGTAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp CCACCCACCACCAAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAAAGGGGGAACCCTGCTaGGTAACCACAAATGACGAT +
Preference number: 5 (lower is better)
Translates to: PPTTKSAKYCYFPGRLKVKGEPC*VTTNDD
Trigger: ATCGTCATTTGTGGTTACCAAGCAGGGTTCCCCCTT...TACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTTGGTGGTGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AATCCAACGGTCACCGAGAGATACCTAAATGCCTCACTGTGCTGGAGCCAGCCATATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: NPTVTERYLNASLCWSQPYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...TGGCTGGCTCCAGCACAGTGAGGCATTTAGGTATCTCTCGGTGACCGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS GCA 90 bp AGGGCTTCCCTGCCTTCAAGGCCCCCAAGCCCTTCCAAGTTTAAGTaGATAATGGACAGAAGACATTTAAAGGCCTTAATTGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RASLPSRPPSPSKFK*IMDRRHLKALIERS
Trigger: TGACCTCTCAATTAAGGCCTTTAAATGTCTTCTGTCCATTATGCACTTAAACTTGGAAGGGCTTGGGGGCCTTGAAGGCAGGGAAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568081.1
CDS-3UTR CAA 90 bp GCTGAGGGCGATGAAGGAAAAGACGGCCATCACTGTGAACATGACAGTGGGAATTATAACTCTGGTCCTTaGTACAAAGTAGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AEGDEGKDGHHCEHDSGNYNSGP*YKVGKE
Trigger: CTCCTTCCCTACTTTGTACAAAGGACCAGAGTTATA...ATTCCCACTGTCATGTTCACAGTGATGGCCGTCTTTTCCTTCATCGCCCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCATGGGCAGATGCTCTTaGGGCGAGAACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVMGRCS*GENPLP
Trigger: GGGGAGTGGGTTCTCGCCCAAAGAGCATCTGCCCAT...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AAGAGTGCTAAGTACTGTTACTTCCCAGGAAGACTGAAAGTAGAAACAGTTCCACTGGGACACTCAGCCTaGGGGAAGACAAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: KSAKYCYFPGRLKVETVPLGHSA*GKTKKS
Trigger: GCTTTTCTTTGTCTTCCCCAAGGCTGAGTGTCCCAG...TGGAACTGTTTCTACTTTCAGTCTTCCTGGGAAGTAACAGTACTTAGCACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp GAAAGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGTTCAGGCTATTGTGCTaGCAGCCAGGACTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ERWGLGYRHIHIYIYITLFRLLC*QPGLGL
Trigger: CAGGCCCAGTCCTGGCTGCAAGCACAATAGCCTGAA...CAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTGGGACACTCAGCCTaGGGGAAGACAAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVLGHSA*GKTKKS
Trigger: GCTTTTCTTTGTCTTCCCCAAGGCTGAGTGTCCCAG...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTATCCCATTCAGGCTATaGTGCTTGCAGCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPIPFRL*CLQPGL
Trigger: CAGTCCTGGCTGCAAGCACAATAGCCTGAATGGGAT...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS-3UTR CAA 90 bp AGGTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCGGCAATGGTGGGAAGTaGTTCACTTTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: RWGLGYRHIHIYIYITLVGNGGK*FTFSAM
Trigger: CATGGCAGAGAAAGTGAACAACTTCCCACCATTGCC...GACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000567529.1
ENST00000568423.5
CDS-3UTR CAA 90 bp GTGGGGGCTGGGGTACAGACATATACATATATATATATATATAACTCTGGTCCTGTAGCCAAGTGGGGTTaGGATTTTTGTCCAAACAGC +
Preference number: 5 (lower is better)
Translates to: VGAGVQTYTYIYIYNSGPVAKWG*DFCPNS
Trigger: GCTGTTTGGACAAAAATCCAAACCCCACTTGGCTAC...AGGACCAGAGTTATATATATATATATATGTATATGTCTGTACCCCAGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
CDS GCA 72 bp GCTGCCGAAAGGCCGCAGCGCTGCGCTGAGCTGCGCTaGACCCGAGCGATGCGGCGCGGAGCCGGCCGCGAG +
Preference number: 6 (lower is better)
Translates to: AAERPQRCAELR*TRAMRRGAGRE
Trigger: CTCGCGGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
CDS TCA 72 bp CGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTaGGCTGCGCTGCACCCGAGCGATGCGGCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RPFGCRKAAALR*AALHPSDAARS
Trigger: GCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
CDS TCA 72 bp GCCAGCGCGCCCGTCGCCTCGCAACCCTGGGGCGGCTaGGGTCCGCCATCCAAAGGTCGGCCGCCCGAGGGA +
Preference number: 6 (lower is better)
Translates to: ASAPVASQPWGG*GPPSKGRPPEG
Trigger: TCCCTCGGGCGGCCGACCTTTGGATGGCGGACCTCAGCCGCCCCAGGGTTGCGAGGCGACGGGCGCGCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS GCA 72 bp TGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGCGCTaGGCTGAGCTGCGCTGCACCCGAGCGATGCGGCGC +
Preference number: 6 (lower is better)
Translates to: CRGRSAAERPQR*AELRCTRAMRR
Trigger: GCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564491.5
ENST00000565923.5
ENST00000566872.5
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
CDS GCA 72 bp GTTCGGCTGCCGAAAGGCCGCAGCGCTGCGCTGAGCTaGGCTGCACCCGAGCGATGCGGCGCGGAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: VRLPKGRSAALS*AAPERCGAEPA
Trigger: GGCCGGCTCCGCGCCGCATCGCTCGGGTGCAGCGCAGCTCAGCGCAGCGCTGCGGCCTTTCGGCAGCCGAAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
CDS TCA 72 bp CCGGGAGCCTCGAGCTCCGGGCAGGCGTGGCGAGGCTaGAGTCTGGGTCTTCCGCGCCCCGCGAGGACCACG +
Preference number: 6 (lower is better)
Translates to: PGASSSGQAWRG*SLGLPRPARTT
Trigger: CGTGGTCCTCGCGGGGCGCGGAAGACCCAGACTTCAGCCTCGCCACGCCTGCCCGGAGCTCGAGGCTCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS CCA 72 bp ACGCCGCGACGTAATCGCCCGCGGGGAGGCGCGGAGTaGAGCCGCAGCCAGCTCCTCCCGCACTCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: TPRRNRPRGGAE*SRSQLLPHSAD
Trigger: GTCAGCAGAGTGCGGGAGGAGCTGGCTGCGGCTCCACTCCGCGCCTCCCCGCGGGCGATTACGTCGCGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS CCA 72 bp GCCTGGCCCAAAGCCTCACTCCTCACGTCCCAGGGGTaGACGGGGGTCCGGGAGCCTCGAGCTCCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AWPKASLLTSQG*TGVREPRAPGR
Trigger: CCTGCCCGGAGCTCGAGGCTCCCGGACCCCCGTCCACCCCTGGGACGTGAGGAGTGAGGCTTTGGGCCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS CCA 72 bp CCCAACTCACCACCCAAAGCCCTGATGGAGCCCGCCTaGTGGCCTGGGCCAGCGCGCCCGTCGCCTCGCAAC +
Preference number: 6 (lower is better)
Translates to: PNSPPKALMEPA*WPGPARPSPRN
Trigger: GTTGCGAGGCGACGGGCGCGCTGGCCCAGGCCACCAGGCGGGCTCCATCAGGGCTTTGGGTGGTGAGTTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565989.5
ENST00000568119.5
CDS CCA 72 bp AACTCACCACCCAAAGCCCTGATGGAGCCCGCCTGGTaGCCTGGGCCAGCGCGCCCGTCGCCTCGCAACCCT +
Preference number: 6 (lower is better)
Translates to: NSPPKALMEPAW*PGPARPSPRNP
Trigger: AGGGTTGCGAGGCGACGGGCGCGCTGGCCCAGGCCACCAGGCGGGCTCCATCAGGGCTTTGGGTGGTGAGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565989.5
ENST00000568119.5
CDS TCA 72 bp AGGTCCGCCATCCAAAGGTCGGCCGCCCGAGGGAGGTaGGGGAAGTCAACCCGGGTCCACCTGCAGGCGCTA +
Preference number: 6 (lower is better)
Translates to: RSAIQRSAARGR*GKSTRVHLQAL
Trigger: TAGCGCCTGCAGGTGGACCCGGGTTGACTTCCCTCACCTCCCTCGGGCGGCCGACCTTTGGATGGCGGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS TCA 72 bp CAGCTGGCCCAGTGGCCTGCCCACACCTCTTTGTCCTaGACCTTGATGGGGCAGCGACTGGGGGCCCGGCAT +
Preference number: 6 (lower is better)
Translates to: QLAQWPAHTSLS*TLMGQRLGARH
Trigger: ATGCCGGGCCCCCAGTCGCTGCCCCATCAAGGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562327.5
ENST00000564491.5
CDS CCA 72 bp AGGGAAGTCAACCCGGGTCCACCTGCAGGCGCTAGTTaGAAGGAAAGGCCCAAAGGAAGCCACGGGCACCCC +
Preference number: 6 (lower is better)
Translates to: REVNPGPPAGAS*KERPKGSHGHP
Trigger: GGGGTGCCCGTGGCTTCCTTTGGGCCTTTCCTTCCAACTAGCGCCTGCAGGTGGACCCGGGTTGACTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564141.1
ENST00000565989.5
ENST00000568119.5
CDS TCA 72 bp GCCACGCGAGACAGCCCACCAGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGAGGTAGTAGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: ATRDSPPGSRPA*RCSTSRGSRGA
Trigger: AGCGCCTCTACTACCTCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACCTGGTGGGCTGTCTCGCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567920.5
ENST00000568018.5
CDS CAA 72 bp GTGAAGAGGATGAGCCAGAGAAAGGCGAGGCCAAAGTaGGTGGCTCCCCCGCCTCCGATCAGCCACGCGAGA +
Preference number: 6 (lower is better)
Translates to: VKRMSQRKARPK*VAPPPPISHAR
Trigger: TCTCGCGTGGCTGATCGGAGGCGGGGGAGCCACCAACTTTGGCCTCGCCTTTCTCTGGCTCATCCTCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000564779.5
ENST00000565923.5
ENST00000566872.5
ENST00000567920.5
ENST00000568018.5
CDS TCA 72 bp GTCCTGAACTCCATCCTCGTGACCTCCGGCCAGCGTTaGAATGAGCCAAATCCGGCGCCCCCAACTCACCAC +
Preference number: 6 (lower is better)
Translates to: VLNSILVTSGQR*NEPNPAPPTHH
Trigger: GTGGTGAGTTGGGGGCGCCGGATTTGGCTCATTTCAACGCTGGCCGGAGGTCACGAGGATGGAGTTCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565989.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGCCGCGGCCGT +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNCRGR
Trigger: ACGGCCGCGGCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425597.8
ENST00000562212.5
ENST00000562765.5
ENST00000565923.5
ENST00000567535.5
CDS CAA 90 bp CATGTGCCTGTAGTTCCAGCTACTCGGGAGGTTGAAGCAGGAGAATaGATTGAACCTGCCGCGGCCGTTCGGCTGCCGAAAGGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: HVPVVPATREVEAGE*IEPAAAVRLPKGRS
Trigger: GCTGCGGCCTTTCGGCAGCCGAACGGCCGCGGCAGGTTCAATCAATTCTCCTGCTTCAACCTCCCGAGTAGCTGGAACTACAGGCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567920.5
CDS TCA 72 bp GAACTCCATCCTCGTGACCTCCGGCCAGCGTTGAAATaGGCCAAATCCGGCGCCCCCAACTCACCACCCAAA +
Preference number: 6 (lower is better)
Translates to: ELHPRDLRPALK*AKSGAPNSPPK
Trigger: TTTGGGTGGTGAGTTGGGGGCGCCGGATTTGGCTCATTTCAACGCTGGCCGGAGGTCACGAGGATGGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565989.5
CDS TCA 72 bp AACCTCCATCCTCGTGACCTCCGGCCAGCGTTGAAATaGGCCAAATCCGGCGCCCCCAACTCACCACCCAAA +
Preference number: 6 (lower is better)
Translates to: NLHPRDLRPALK*AKSGAPNSPPK
Trigger: TTTGGGTGGTGAGTTGGGGGCGCCGGATTTGGCTCATTTCAACGCTGGCCGGAGGTCACGAGGATGGAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568119.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGGGCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNWAWW
Trigger: CCACCACGCCCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566872.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
CDS TCA 72 bp AAGACTTATGGTCCATGCATATGCCACAAGTGGGACTaGAGGACAGTCAGGCCTGTGGGCACCCCACCCCGC +
Preference number: 6 (lower is better)
Translates to: KTYGPCICHKWD*RTVRPVGTPPR
Trigger: GCGGGGTGGGGTGCCCACAGGCCTGACTGTCCTTCAGTCCCACTTGTGGCATATGCATGGACCATAAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567535.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACCTTGATGGGGCA +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNLDGA
Trigger: TGCCCCATCAAGGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562327.5
ENST00000564491.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTCCATCCTCGTG +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNSILV
Trigger: CACGAGGATGGAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565989.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACTGCTGTATCACA +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNCCIT
Trigger: TGTGATACAGCAGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361900.10
CDS GCA 72 bp GCGCTTGGTCATGCTGACATGCTGGGGAGGAATATCTaGCTCGAAGTCTTGGTAGAAACATGGCTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: ALGHADMLGRNI*LEVLVETWLQR
Trigger: CCGCTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567529.1
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS GCA 72 bp TTCTCTGCCATGATGTTACCAGCTGGCCCAGTGGCCTaGCCACACCTCTTTGTCCTGAACGCCTTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: FSAMMLPAGPVA*PHLFVLNAFSE
Trigger: TTCTGAAAAGGCGTTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568423.5
CDS TCA 72 bp GTCACATCCAGAGGTAGTAGAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATATCTGCCTCGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: VTSRGSRGAWSC*HAGEEYLPRSL
Trigger: AAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCCTCTACTACCTCTGGATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000567529.1
ENST00000568423.5
CDS TCA 72 bp CACACATCCAGAGGTAGTAGAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATATCTGCCTCGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HTSRGSRGAWSC*HAGEEYLPRSL
Trigger: AAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCCTCTACTACCTCTGGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567535.5
ENST00000568119.5
CDS CCA 72 bp GAAGTTGTTCACTTTCTCTGCCATGATGTTACCAGCTaGCCCAGTGGCCTGCCCACACCTCTTTGTCCTGAA +
Preference number: 6 (lower is better)
Translates to: EVVHFLCHDVTS*PSGLPTPLCPE
Trigger: TTCAGGACAAAGAGGTGTGGGCAGGCCACTGGGCCAGCTGGTAACATCATGGCAGAGAAAGTGAACAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS CAA 90 bp CTTGGTCATGCTGACATGCTGGGGAGGAATATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAGCGGGATGAATTTGGGCAATGGTGG +
Preference number: 6 (lower is better)
Translates to: LGHADMLGRNICLEV*VETWLQRDEFGQWW
Trigger: CCACCATTGCCCAAATTCATCCCGCTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567529.1
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS TCA 72 bp TCAACATCCAGAGGTAGTAGAGGCGCTTGGTCATGCTaGCATGCTGGGGAGGAATATCTGCCTCGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: STSRGSRGAWSC*HAGEEYLPRSL
Trigger: AAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGCATGACCAAGCGCCTCTACTACCTCTGGATGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567920.5
ENST00000568018.5
CDS CAA 72 bp GCTGACATGCTGGGGAGGAATATCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAGCGGGATGAATTTGGG +
Preference number: 6 (lower is better)
Translates to: ADMLGRNICLEV*VETWLQRDEFG
Trigger: CCCAAATTCATCCCGCTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGATATTCCTCCCCAGCATGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567529.1
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS CCA 72 bp GGGAGGAATATCTGCCTCGAAGTCTTGGTAGAAACATaGCTTCAGCGGGATGAATTTGGGCAATGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: GRNICLEVLVET*LQRDEFGQWWE
Trigger: TTCCCACCATTGCCCAAATTCATCCCGCTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGATATTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000361900.10
ENST00000425597.8
ENST00000562212.5
ENST00000562327.5
ENST00000562765.5
ENST00000564141.1
ENST00000564491.5
ENST00000564779.5
ENST00000565923.5
ENST00000565989.5
ENST00000566872.5
ENST00000567529.1
ENST00000567535.5
ENST00000567920.5
ENST00000568018.5
ENST00000568119.5
ENST00000568423.5
CDS GCA 72 bp AGAGGTCAGAAGGGGTTAGTTCTACCCATACATCTTTaGAAGTTTCCACGTGGTAGACCTGTGTGTTGCAAC +
Preference number: 6 (lower is better)
Translates to: RGQKGLVLPIHL*KFPRGRPVCCN
Trigger: GTTGCAACACACAGGTCTACCACGTGGAAACTTGCAAAGATGTATGGGTAGAACTAACCCCTTCTGACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568081.1