RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAMP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000116521

Ensembl transcript IDs: ENST00000302631.8, ENST00000355379.3, ENST00000462151.5, ENST00000465312.5, ENST00000472397.5, ENST00000478737.5, ENST00000480219.1, ENST00000490999.5, ENST00000497470.1, ENST00000570831.5, ENST00000570960.1, ENST00000571844.5, ENST00000572538.5, ENST00000572736.5, ENST00000573013.1, ENST00000573279.1, ENST00000574126.5, ENST00000576213.5

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGGGACTAGGTCACAGTaGACTCCCCACACGCCTGTC +
Preference number: 2 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGGTRSQ*TPHTPV
Trigger: GACAGGCGTGTGGGGAGTTCACTGTGACCTAGTCCC...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
3UTR CAA 90 bp GAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: ELPTRLSGSAVMAIG*GALRRSHQLVMSLQ
Trigger: TTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGTGCCGGCTGGGTCGGTaGTGGATCACAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACECRLGR*WITAGS
Trigger: GGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCA...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGTCCCCGCAGCAGCCGTaGGTTGCGCCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACESPQQP*VAPASC
Trigger: ACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGA...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGCAATGGGGCAGGGGCTaGAGGCTCATAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEQWGRG*RLIGWW
Trigger: CCACCAGCCTATGAGCCTCCAGCCCCTGCCCCATTG...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGGGCGACCAGCAGCATaGGCACGGATACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEGRPAA*ARILLC
Trigger: ACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCC...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGCAGCAGCCGTGGGTTaGGCCTGCGTCTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEAAAVG*ACVLSK
Trigger: TTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGC...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCCCAGCGGCTGCATTaGCAGCTGCGGTTCGCACCG +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEPQRLH*QLRFAP
Trigger: CGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGG...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGGCACAGCAATGCCAGTaGAGAGCAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVAQQCQ*RAGRPA
Trigger: TGCTGGTCGCCCTGCTCTTCACTGGCATTGCTGTGC...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGAGCAGCCCCAGCGGCTaGATTGGCAGCTGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEESSPSG*IGSCGS
Trigger: CGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCT...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCAGCAGCCCCAGCGGCTaGATTGGCAGCTGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPSSPSG*IGSCGS
Trigger: CGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCT...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGTCAGCAGCTCAGCTGTaGCTGCTGCAGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVSAAQL*LLQLRP
Trigger: AGGCCTCAGCTGCAGCAGCCACAGCTGAGCTGCTGA...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCCCCCAGCGGCTGCATTaGCAGCTGCGGTTCGCACCG +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSPQRLH*QLRFAP
Trigger: CGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGG...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGACAGCAGAGGGAAGCTaGGTTGGGGCGTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVTAEGS*VGACER
Trigger: CCTCTCACACGCCCCAACCCAGCTTCCCTCTGCTGT...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTAAGCCATGTTTGCAACTaGGGCCTCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALSHVCN*GLRGPL
Trigger: CAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCT...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGGCTCTGAGCCATGTTTaGAACTGCGGCCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEALSHV*NCGLRG
Trigger: GCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGC...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGCTCTGAGCCATGTTTaGAACTGCGGCCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPALSHV*NCGLRG
Trigger: GCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGTGCCGGCTGGGTCGGTaGTGGATCACAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTCRLGR*WITAGS
Trigger: GGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCA...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR GCA 90 bp ACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGTCAAGCGTGGCATACTaGCGGCTGGGTCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRLSGSAVMAIGLGALRRSSVAY*RLGRCW
Trigger: CCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGA...CCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR GCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGCTTTCTCGAGGGCTaGAAGGAGGGAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVSFLEG*KEGAEG
Trigger: ACCCTCAGCTCCCTCCTTGCAGCCCTCGAGAAAGCT...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACTCCCCGCAGCAGCCGTaGGTTGCGCCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDSPQQP*VAPASC
Trigger: ACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGA...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVCRRQA*HTAGWV
Trigger: GACCCAGCCGGCAGTATGCCACGCTTGACGTCTACA...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGCTCATAGGCTGGTaGTGGCTCCCGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVRLIGW*WLPGLK
Trigger: TTTGAGACCCGGGAGCCACCACCAGCCTATGAGCCT...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCCAATGGGGCAGGGGCTaGAGGCTCATAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPQWGRG*RLIGWW
Trigger: CCACCAGCCTATGAGCCTCCAGCCCCTGCCCCATTG...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGCAATGGGGCAGGGGCTaGAGGCTCATAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRLSGSAVMAIGLGALRRQWGRG*RLIGWW
Trigger: CCACCAGCCTATGAGCCTCCAGCCCCTGCCCCATTG...CCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACCCCCAGCGGCTGCATTaGCAGCTGCGGTTCGCACCG +
Preference number: 4 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDPQRLH*QLRFAP
Trigger: CGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGG...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALPPSLL*AMFATA
Trigger: CGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGG...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTATCTTGCTGGGCCTTCTaGAAGCTGGCACCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALSCWAF*KLAPVR
Trigger: CCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGGGACTAGGTCACAGTaGACTCCCCACACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPGTRSQ*TPHTPV
Trigger: GACAGGCGTGTGGGGAGTTCACTGTGACCTAGTCCC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCCGCCCCGCTTCTCTGTaGACGGATTGGTTCCACCGA +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPRPASL*TDWFHR
Trigger: TCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCG...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR GCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCAGCCATGTTTGCAACTaGGGCCTCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSSHVCN*GLRGPL
Trigger: CAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCT...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGCTCTGAGCCATGTTTaGAACTGCGGCCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTALSHV*NCGLRG
Trigger: GCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGC...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGGGCTGCATTGGCAGCTaGGGTTCGCACCGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQGCIGS*GSHRRV
Trigger: AACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCC...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAAGCAGCCCCAGCGGCTaGATTGGCAGCTGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGSSPSG*IGSCGS
Trigger: CGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCT...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPGCQAR*ARRTGF
Trigger: GAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEGCQAR*ARRTGF
Trigger: GAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACC...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGTGGCATACTGCCGGCTaGGTCGGTGCTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEWHTAG*VGAGSQ
Trigger: CTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCA...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTACCCCAGCGGCTGCATTaGCAGCTGCGGTTCGCACCG +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLPQRLH*QLRFAP
Trigger: CGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGG...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGGGGGCGTGTGAGAGGTaGCAGCAGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQGACER*QQCGLM
Trigger: CATCAGGCCACACTGCTGCCACCTCTCACACGCCCC...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGGGGCGTGTGAGAGGTaGCAGCAGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSGACER*QQCGLM
Trigger: CATCAGGCCACACTGCTGCCACCTCTCACACGCCCC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACCGAAGCAACAGCCGTaGCACAGCAGAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALPKQQP*HSRGKL
Trigger: CAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGG...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGCTCATAGGCTGGTaGTGGCTGAAAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVRLIGW*WLKGVV
Trigger: GACAACCCCTTTCAGCCACCACCAGCCTATGAGCCT...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR TCA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGGGGCGACCAGCAGCATaGGCACGGATACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGGRPAA*ARILLC
Trigger: ACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCC...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGGCACAGCAATGCCAGTaGAGAGCAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGAQQCQ*RAGRPA
Trigger: TGCTGGTCGCCCTGCTCTTCACTGGCATTGCTGTGC...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGCACAGCAATGCCAGTaGAGAGCAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIAQQCQ*RAGRPA
Trigger: TGCTGGTCGCCCTGCTCTTCACTGGCATTGCTGTGC...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCGGGACTAGGTCACAGTaGACTCCCCACACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GALRRSHQLVMSLQVPETGTRSQ*TPHTPV
Trigger: GACAGGCGTGTGGGGAGTTCACTGTGACCTAGTCCC...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCCGCCCCGCTTCTCTGTaGACGGATTGGTTCCACCGA +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSRPASL*TDWFHR
Trigger: TCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCG...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR GCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVGFRRL*SEPCLQ
Trigger: TTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACC...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGCAGCTGAGGCCTGAGTaGTGTATGAGCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEQLRPE*CMSHSS
Trigger: AGAACTATGGCTCATACAGCACTCAGGCCTCAGCTG...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGTCGGTCCAACTCCTCTaGCTTCCGGTTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEESVQLL*LPVELL
Trigger: GAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGA...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGGCTGCATTGGCAGCTaGGGTTCGCACCGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLGCIGS*GSHRRV
Trigger: AACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCC...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAAGCAGCCCCAGCGGCTaGATTGGCAGCTGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLSSPSG*IGSCGS
Trigger: CGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCT...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTATCCCCGCAGCAGCCGTaGGTTGCGCCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLSPQQP*VAPASC
Trigger: ACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGA...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSGCQAR*ARRTGF
Trigger: GAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTGCQAR*ARRTGF
Trigger: GAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACC...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGCAATGGGGCAGGGGCTaGAGGCTCATAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEQWGRG*RLIGWW
Trigger: CCACCAGCCTATGAGCCTCCAGCCCCTGCCCCATTG...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTCAGCAGCTCAGCTGTaGCTGCTGCAGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSSAAQL*LLQLRP
Trigger: AGGCCTCAGCTGCAGCAGCCACAGCTGAGCTGCTGA...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGCCTGCGCCATTGTTaGTTTCCACACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVSLRHC*FPHRSW
Trigger: CCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCT...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGAACCTGGGATACCAATaGCCTGGAGGACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACENLGYQ*PGGQRA
Trigger: TGCTCTTTGTCCTCCAGGCCATTGGTATCCCAGGTT...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGGGGGCGTGTGAGAGGTaGCAGCAGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEGACER*QQCGLM
Trigger: CATCAGGCCACACTGCTGCCACCTCTCACACGCCCC...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGACAGCAGAGGGAAGCTaGGTTGGGGCGTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQTAEGS*VGACER
Trigger: CCTCTCACACGCCCCAACCCAGCTTCCCTCTGCTGT...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGCCGAAGCAACAGCCGTaGCACAGCAGAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGPKQQP*HSRGKL
Trigger: CAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGG...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCCCGAAGCAACAGCCGTaGCACAGCAGAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSPKQQP*HSRGKL
Trigger: CAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGG...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGATCACAGCTGGGTCCTaGAAGGGGTTGTCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: TRLSGSAVMAIGLGALRRITAGS*KGLSSS
Trigger: CGAGCTTGACAACCCCTTTCAGGACCCAGCTGTGAT...CCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR TCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGTGGATACAGTCTTCTaGAATTCTTGGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEVDTVF*NSWGIS
Trigger: GGAGATCCCCCAAGAATTTCAGAAGACTGTATCCAC...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGGGGCGACCAGCAGCATaGGCACGGATACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEGRPAA*ARILLC
Trigger: ACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCC...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACTCTTGCTGGGCCTTCTaGAAGCTGGCACCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDSCWAF*KLAPVR
Trigger: CCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGGCAGCAGCCGTGGGTTaGGCCTGCGTCTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEAAAVG*ACVLSK
Trigger: TTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGC...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR GCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGAGCCATGTTTGCAACTaGGGCCTCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGSHVCN*GLRGPL
Trigger: CAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCT...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCTCTGAGCCATGTTTaGAACTGCGGCCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGALSHV*NCGLRG
Trigger: GCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGC...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACAGCTTTCTCGAGGGCTaGAAGGAGGGAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDSFLEG*KEGAEG
Trigger: ACCCTCAGCTCCCTCCTTGCAGCCCTCGAGAAAGCT...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAAGCTTTCTCGAGGGCTaGAAGGAGGGAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAISFLEG*KEGAEG
Trigger: ACCCTCAGCTCCCTCCTTGCAGCCCTCGAGAAAGCT...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEHEHGY*CVALRH
Trigger: GTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATG...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPHEHGY*CVALRH
Trigger: GTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATG...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGAAAGCTGGCACCTGTaGGGCGGTATAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPESWHL*GGIRSG
Trigger: TCCACTCCTTATACCGCCGCACAGGTGCCAGCTTTC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCGGCTGCATTGGCAGCTaGGGTTCGCACCGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVGCIGS*GSHRRV
Trigger: AACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCC...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGTCTCTGTGCACGGATTaGTTCCACCGACCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGSLCTD*FHRPEG
Trigger: CCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGA...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGAGGCTCATAGGCTGGTaGTGGCTCCCGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTRLIGW*WLPGLK
Trigger: TTTGAGACCCGGGAGCCACCACCAGCCTATGAGCCT...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCTTTCCACACAGAAGCTaGCCAGGCAGGCGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPFPHRS*PGRRGS
Trigger: ACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAA...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTATTCGCACCGCAGGGTTaGAGAAGACACCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALFAPQG*RRHQQQ
Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAA...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCTTCGCACCGCAGGGTTaGAGAAGACACCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPFAPQG*RRHQQQ
Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAA...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGGGGGCGTGTGAGAGGTaGCAGCAGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKGACER*QQCGLM
Trigger: CATCAGGCCACACTGCTGCCACCTCTCACACGCCCC...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTATGGAGGCTCATAGGCTaGTGGTGGCTGAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALWRLIG*WWLKGV
Trigger: AACCCCTTTCAGCCACCACCAGCCTATGAGCCTCCA...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR TCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGCCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKPPSLL*AMFATA
Trigger: CGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGG...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGCACAGCAATGCCAGTaGAGAGCAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLAQQCQ*RAGRPA
Trigger: TGCTGGTCGCCCTGCTCTTCACTGGCATTGCTGTGC...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGGGATCCGTTTCAGCATaGCAATTCCTAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: ITEATAVAQQREAGLGRVGSVSA*QFLAQQ
Trigger: TTGCTGTGCTAGGAATTGTCATGCTGAAACGGATCC...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGTCTTGCTGGGCCTTCTaGAAGCTGGCACCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGSCWAF*KLAPVR
Trigger: CCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACTAGGTCACAGTaGACTCCCCACACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLGTRSQ*TPHTPV
Trigger: GACAGGCGTGTGGGGAGTTCACTGTGACCTAGTCCC...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGGCAGCAGCCGTGGGTTaGGCCTGCGTCTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKAAAVG*ACVLSK
Trigger: TTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGC...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR GCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPGFRRL*SEPCLQ
Trigger: TTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEGFRRL*SEPCLQ
Trigger: TTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACC...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAAGCTTTCTCGAGGGCTaGAAGGAGGGAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGSFLEG*KEGAEG
Trigger: ACCCTCAGCTCCCTCCTTGCAGCCCTCGAGAAAGCT...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTACGGATACTGCTGTGTTaGCCTTCGGCACCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLRILLC*PSAPPE
Trigger: CTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCG...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQHEHGY*CVALRH
Trigger: GTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATG...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATACATGAGCACGGATACTaGTGTGTTGCCCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIHEHGY*CVALRH
Trigger: GTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATG...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACGAAAGCTGGCACCTGTaGGGCGGTATAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDESWHL*GGIRSG
Trigger: TCCACTCCTTATACCGCCGCACAGGTGCCAGCTTTC...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGATACCTCTAACCCAGTaGCCACAACCAACTACCGCC +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEIPLTQ*PQPTTA
Trigger: GGCGGTAGTTGGTTGTGGGCACTGGGTTAGAGGTAT...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTATGGCATACTGCCGGCTaGGTCGGTGCTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLWHTAG*VGAGSQ
Trigger: CTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCA...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTATGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLCRRQA*HTAGWV
Trigger: GACCCAGCCGGCAGTATGCCACGCTTGACGTCTACA...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTATCAGCAGCTCAGCTGTaGCTGCTGCAGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLSAAQL*LLQLRP
Trigger: AGGCCTCAGCTGCAGCAGCCACAGCTGAGCTGCTGA...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTTCCACACAGAAGCTaGCCAGGCAGGCGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GALRRSHQLVMSLQVPETFPHRS*PGRRGS
Trigger: ACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAA...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGAGCCTGCGCCATTGTTaGTTTCCACACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEESLRHC*FPHRSW
Trigger: CCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCT...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGACTGAATCCCCAACCTaGGATACCAATGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TRLSGSAVMAIGLGALRRTESPT*DTNGLE
Trigger: CTCCAGGCCATTGGTATCCCAGGTTGGGGATTCAGT...CCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATATTCGCACCGCAGGGTTaGAGAAGACACCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIFAPQG*RRHQQQ
Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAA...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAACAGCAGAGGGAAGCTaGGTTGGGGCGTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSTAEGS*VGACER
Trigger: CCTCTCACACGCCCCAACCCAGCTTCCCTCTGCTGT...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCCCGAAGCAACAGCCGTaGCACAGCAGAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVPKQQP*HSRGKL
Trigger: CAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGG...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGAGGCTCATAGGCTGGTaGTGGCTGAAAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQRLIGW*WLKGVV
Trigger: GACAACCCCTTTCAGCCACCACCAGCCTATGAGCCT...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTGGAGGCTCATAGGCTaGTGGTGGCTGAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQWRLIG*WWLKGV
Trigger: AACCCCTTTCAGCCACCACCAGCCTATGAGCCTCCA...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR TCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTAGGCCTGAGTGCTGTATaGGCCATAGTTCTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALGLSAV*AIVLRF
Trigger: GAACCTAAGAACTATGGCTCATACAGCACTCAGGCC...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTACAAAGGAGCAGGGAGTaGAAAGGAGGACCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLQRSRE*KGGPRG
Trigger: TCCTCTGGGTCCTCCTTTTCACTCCCTGCTCCTTTG...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGCAAAGGAGCAGGGAGTaGAAAGGAGGACCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEQRSRE*KGGPRG
Trigger: TCCTCTGGGTCCTCCTTTTCACTCCCTGCTCCTTTG...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGTCGGTCCAACTCCTCTaGCTTCCGGTTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGSVQLL*LPVELL
Trigger: GAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGA...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCGGTCCAACTCCTCTaGCTTCCGGTTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKSVQLL*LPVELL
Trigger: GAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGA...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTAAGAAAGCCCAAAGCCTaGGCCATTGTTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LPTRLSGSAVMAIGLGALRKPKA*AIVGFH
Trigger: GTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCT...TAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCACGGATACTGCTGTGTTaGCCTTCGGCACCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSRILLC*PSAPPE
Trigger: CTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCG...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGCGGATACTGCTGTGTTaGCCTTCGGCACCACCAGAG +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKRILLC*PSAPPE
Trigger: CTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCG...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCTGTGCACGGATTaGTTCCACCGACCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVSLCTD*FHRPEG
Trigger: CCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGA...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGGTGCTGGATCACAGCTaGGTCCTGAAAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEVLDHS*VLKGVV
Trigger: GACAACCCCTTTCAGGACCCAGCTGTGATCCAGCAC...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACAGCCTGCGCCATTGTTaGTTTCCACACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDSLRHC*FPHRSW
Trigger: CCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCT...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCGGAAAGCCTTATACATaGGGCGGTACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPGKPYT*GGTSRQ
Trigger: TTGTCTGCTGGTACCGCCCCATGTATAAGGCTTTCC...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCGGGATACCAATGGCCTaGAGGACAAAGAGCACATCC +
Preference number: 4 (lower is better)
Translates to: GALRRSHQLVMSLQVPETGIPMA*RTKSTS
Trigger: GGATGTGCTCTTTGTCCTCCAGGCCATTGGTATCCC...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
3UTR CAA 72 bp ACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGCCATCAGTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: TRLSGSAVMAIG*GALRRSHQLVM
Trigger: CATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGGCCTGAGTGCTGTATaGGCCATAGTTCTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSGLSAV*AIVLRF
Trigger: GAACCTAAGAACTATGGCTCATACAGCACTCAGGCC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCCCTCTGCCTTCCGGTTaGGCTCCTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVPLPSG*APPVSS
Trigger: TGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGG...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGCCTCTGCCTTCCGGTTaGGCTCCTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKPLPSG*APPVSS
Trigger: TGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGG...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGCAAAGGAGCAGGGAGTaGAAAGGAGGACCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKQRSRE*KGGPRG
Trigger: TCCTCTGGGTCCTCCTTTTCACTCCCTGCTCCTTTG...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCACAAAGGAGCAGGGAGTaGAAAGGAGGACCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSQRSRE*KGGPRG
Trigger: TCCTCTGGGTCCTCCTTTTCACTCCCTGCTCCTTTG...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGGGATCCGTTTCAGCATaGCAATTCCTAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEEGSVSA*QFLAQQ
Trigger: TTGCTGTGCTAGGAATTGTCATGCTGAAACGGATCC...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGGFRRL*SEPCLQ
Trigger: TTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACC...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCCAGCTGAGGCCTGAGTaGTGTATGAGCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSQLRPE*CMSHSS
Trigger: AGAACTATGGCTCATACAGCACTCAGGCCTCAGCTG...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGAGAAAGCCCAAAGCCTaGGCCATTGTTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTRKPKA*AIVGFH
Trigger: GTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCT...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGAAAGCTGGCACCTGTaGGGCGGTATAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLESWHL*GGIRSG
Trigger: TCCACTCCTTATACCGCCGCACAGGTGCCAGCTTTC...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCGTGCTGGATCACAGCTaGGTCCTGAAAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVVLDHS*VLKGVV
Trigger: GACAACCCCTTTCAGGACCCAGCTGTGATCCAGCAC...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302631.8
ENST00000570831.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGCTTGGGGGATCTCCATaGAGATGTCCTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGLGGSP*RCPGKS
Trigger: GCTTTTTCCAGGACATCTCCATGGAGATCCCCCAAG...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGTTTCCACACAGAAGCTaGCCAGGCAGGCGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGFPHRS*PGRRGS
Trigger: ACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAA...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACAGCCTGCGCCATTGTTaGTTTCCACACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDSLRHC*FPHRSW
Trigger: CCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCT...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGAAAGCCTTATACATaGGGCGGTACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIGKPYT*GGTSRQ
Trigger: TTGTCTGCTGGTACCGCCCCATGTATAAGGCTTTCC...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGGAAAGCCTTATACATaGGGCGGTACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSGKPYT*GGTSRQ
Trigger: TTGTCTGCTGGTACCGCCCCATGTATAAGGCTTTCC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGGGATACCAATGGCCTaGAGGACAAAGAGCACATCC +
Preference number: 4 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGGIPMA*RTKSTS
Trigger: GGATGTGCTCTTTGTCCTCCAGGCCATTGGTATCCC...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGGGGATACCAATGGCCTaGAGGACAAAGAGCACATCC +
Preference number: 4 (lower is better)
Translates to: LGALRRSHQLVMSLQVPEGIPMA*RTKSTS
Trigger: GGATGTGCTCTTTGTCCTCCAGGCCATTGGTATCCC...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACAACCTGGGATACCAATaGCCTGGAGGACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDNLGYQ*PGGQRA
Trigger: TGCTCTTTGTCCTCCAGGCCATTGGTATCCCAGGTT...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCATTCGCACCGCAGGGTTaGAGAAGACACCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSFAPQG*RRHQQQ
Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAA...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTCCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVPPSLL*AMFATA
Trigger: CGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGG...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGCCTGAGTGCTGTATaGGCCATAGTTCTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDGLSAV*AIVLRF
Trigger: GAACCTAAGAACTATGGCTCATACAGCACTCAGGCC...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCTCTGCCTTCCGGTTaGGCTCCTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSPLPSG*APPVSS
Trigger: TGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGG...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACGTGGATACAGTCTTCTaGAATTCTTGGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDVDTVF*NSWGIS
Trigger: GGAGATCCCCCAAGAATTTCAGAAGACTGTATCCAC...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACGGATCCGTTTCAGCATaGCAATTCCTAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDGSVSA*QFLAQQ
Trigger: TTGCTGTGCTAGGAATTGTCATGCTGAAACGGATCC...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTTCTTGCTGGGCCTTCTaGAAGCTGGCACCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVSCWAF*KLAPVR
Trigger: CCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCCATGTTTGCAACTaGGGCCTCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGSHVCN*GLRGPL
Trigger: CAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCT...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTACAGCTGAGGCCTGAGTaGTGTATGAGCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLQLRPE*CMSHSS
Trigger: AGAACTATGGCTCATACAGCACTCAGGCCTCAGCTG...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTGAAAGCTGGCACCTGTaGGGCGGTATAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSESWHL*GGIRSG
Trigger: TCCACTCCTTATACCGCCGCACAGGTGCCAGCTTTC...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAGGCTGCATTGGCAGCTaGGGTTCGCACCGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGGCIGS*GSHRRV
Trigger: AACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCC...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCATACCTCTAACCCAGTaGCCACAACCAACTACCGCC +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVIPLTQ*PQPTTA
Trigger: GGCGGTAGTTGGTTGTGGGCACTGGGTTAGAGGTAT...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR GCA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCAAGCTAAGACGAAAGTaGCCCCACGTGATACCTCTA +
Preference number: 4 (lower is better)
Translates to: GALRRSHQLVMSLQVPETKLRRK*PHVIPL
Trigger: TAGAGGTATCACGTGGGGGCACTTTCGTCTTAGCTT...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGAGAGGTAGTACATGGTaGATACAGTCTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: NRSNSRGTAEGSWVGACERGSTW*IQSSEI
Trigger: AATTTCAGAAGACTGTATCCACCATGTACTACCTCT...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAAACCTGGGATACCAATaGCCTGGAGGACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLNLGYQ*PGGQRA
Trigger: TGCTCTTTGTCCTCCAGGCCATTGGTATCCCAGGTT...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGACTGAATCCCCAACCTaGGATACCAATGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKTESPT*DTNGLE
Trigger: CTCCAGGCCATTGGTATCCCAGGTTGGGGATTCAGT...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGACTGAATCCCCAACCTaGGATACCAATGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGTESPT*DTNGLE
Trigger: CTCCAGGCCATTGGTATCCCAGGTTGGGGATTCAGT...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAACTGAATCCCCAACCTaGGATACCAATGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSTESPT*DTNGLE
Trigger: CTCCAGGCCATTGGTATCCCAGGTTGGGGATTCAGT...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTACAGCAGAGGGAAGCTaGGTTGGGGCGTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVTAEGS*VGACER
Trigger: CCTCTCACACGCCCCAACCCAGCTTCCCTCTGCTGT...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGACCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGPPSLL*AMFATA
Trigger: CGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGG...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGTGGATACAGTCTTCTaGAATTCTTGGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGVDTVF*NSWGIS
Trigger: GGAGATCCCCCAAGAATTTCAGAAGACTGTATCCAC...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAGGGCGACCAGCAGCATaGGCACGGATACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGGRPAA*ARILLC
Trigger: ACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCC...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCACAGCTGAGGCCTGAGTaGTGTATGAGCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSQLRPE*CMSHSS
Trigger: AGAACTATGGCTCATACAGCACTCAGGCCTCAGCTG...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCAGAAAGCCCAAAGCCTaGGCCATTGTTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVRKPKA*AIVGFH
Trigger: GTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCT...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGAGAAAGCCCAAAGCCTaGGCCATTGTTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGRKPKA*AIVGFH
Trigger: GTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCT...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCCTTGGGGGATCTCCATaGAGATGTCCTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVLGGSP*RCPGKS
Trigger: GCTTTTTCCAGGACATCTCCATGGAGATCCCCCAAG...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAAACCTGGGATACCAATaGCCTGGAGGACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLNLGYQ*PGGQRA
Trigger: TGCTCTTTGTCCTCCAGGCCATTGGTATCCCAGGTT...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGTGGATACAGTCTTCTaGAATTCTTGGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLVDTVF*NSWGIS
Trigger: GGAGATCCCCCAAGAATTTCAGAAGACTGTATCCAC...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGAACGAAGAAATTGAATaGACTGTCACTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTNEEIE*TVTPES
Trigger: GCTTTCCGGAGTGACAGTTCATTCAATTTCTTCGTT...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAAACGAAGAAATTGAATaGACTGTCACTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGHSELPTRLSGSAVMAINEEIE*TVTPES
Trigger: GCTTTCCGGAGTGACAGTTCATTCAATTTCTTCGTT...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGGATCCGTTTCAGCATaGCAATTCCTAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSGSVSA*QFLAQQ
Trigger: TTGCTGTGCTAGGAATTGTCATGCTGAAACGGATCC...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGATCGGTCCAACTCCTCTaGCTTCCGGTTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGSVQLL*LPVELL
Trigger: GAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGA...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGACGGATACTGCTGTGTTaGCCTTCGGCACCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGRILLC*PSAPPE
Trigger: CTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCG...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR GCA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGAAGCTAAGACGAAAGTaGCCCCACGTGATACCTCTA +
Preference number: 4 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKKLRRK*PHVIPL
Trigger: TAGAGGTATCACGTGGGGGCACTTTCGTCTTAGCTT...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CCA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACTCCAGAGGTAGTACATaGTGGATACAGTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDSRGST*WIQSSE
Trigger: TTCAGAAGACTGTATCCACCATGTACTACCTCTGGA...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTTTTCCACACAGAAGCTaGCCAGGCAGGCGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVFPHRS*PGRRGS
Trigger: ACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAA...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTGGAAAGCCTTATACATaGGGCGGTACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSGKPYT*GGTSRQ
Trigger: TTGTCTGCTGGTACCGCCCCATGTATAAGGCTTTCC...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGACCTCTGCCTTCCGGTTaGGCTCCTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGPLPSG*APPVSS
Trigger: TGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGG...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGAACGAAGAAATTGAATaGACTGTCACTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGNEEIE*TVTPES
Trigger: GCTTTCCGGAGTGACAGTTCATTCAATTTCTTCGTT...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCAGAGGTAGTACATGGTaGATACAGTCTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSRGSTW*IQSSEI
Trigger: AATTTCAGAAGACTGTATCCACCATGTACTACCTCT...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCAGAGGTAGTACATGGTaGATACAGTCTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: GALRRSHQLVMSLQVPETRGSTW*IQSSEI
Trigger: AATTTCAGAAGACTGTATCCACCATGTACTACCTCT...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCCAGAGGTAGTACATaGTGGATACAGTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVSRGST*WIQSSE
Trigger: TTCAGAAGACTGTATCCACCATGTACTACCTCTGGA...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGACTTGGGGGATCTCCATaGAGATGTCCTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGLGGSP*RCPGKS
Trigger: GCTTTTTCCAGGACATCTCCATGGAGATCCCCCAAG...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTTCCAGAGGTAGTACATaGTGGATACAGTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSSRGST*WIQSSE
Trigger: TTCAGAAGACTGTATCCACCATGTACTACCTCTGGA...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CCA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAAGAGGTAGTACATGGTaGATACAGTCTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSRGSTW*IQSSEI
Trigger: AATTTCAGAAGACTGTATCCACCATGTACTACCTCT...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR TCA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAACGAAGAAATTGAATaGACTGTCACTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGNEEIE*TVTPES
Trigger: GCTTTCCGGAGTGACAGTTCATTCAATTTCTTCGTT...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS TCA 90 bp TCAAGCTCGCTGGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCGGCCTCCGCGGCCCTCTGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSSLGSANGFPPSLL*AMFATAASAALCPP
Trigger: TGGAGGGCAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000465312.5
ENST00000480219.1
ENST00000497470.1
ENST00000570831.5
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
ENST00000576213.5
CDS GCA 90 bp GGTTGTCAAGCTCGCTGGGCTCGGCGAACGGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAACTGCGGCCTCCGCGGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GCQARWARRTGFRRL*SEPCLQLRPPRPSA
Trigger: GGCAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000465312.5
ENST00000480219.1
ENST00000497470.1
ENST00000570831.5
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
ENST00000576213.5
CDS CCA 90 bp GTCAAGCGTGGCATACTGCCGGCTGGGTCGGTGCTGGATCACAGCTaGGTCCTGAGGGCAGAGACCCGGGTCTCAGCTGGCACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: VKRGILPAGSVLDHS*VLRAETRVSAGTQC
Trigger: GCACTGGGTGCCAGCTGAGACCCGGGTCTCTGCCCTCAGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462151.5
ENST00000571844.5
CDS-3UTR CAA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGCCCCAGCGGCTGCATaGGCAGCTGCGGTTCGCACC +
Preference number: 5 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEAPAAA*AAAVRT
Trigger: GGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGC...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 90 bp TCCACTTCACTCGCCTCAGTTCGCCCCGCTTCTCTGTGCACGGATTaGTTCCACCGACCGGAAGGGCCACAAGGATCCCCGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: STSLASVRPASLCTD*FHRPEGPQGSPQQP
Trigger: CGGCTGCTGCGGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS GCA 90 bp CCCTCAGAGTCCACTTCACTCGCCTCAGTTCGCCCCGCTTCTCTGTaGACGGATTGGTTCCACCGACCGGAAGGGCCACAAGGATCCCCG +
Preference number: 5 (lower is better)
Translates to: PSESTSLASVRPASL*TDWFHRPEGPQGSP
Trigger: CGGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGACTCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS CCA 90 bp GAGGCCGACTGGCGCAAGTCACCTGAAAGGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCTGAGCCATGT +
Preference number: 5 (lower is better)
Translates to: EADWRKSPERGCQAR*ARRTGFRRLCSEPC
Trigger: ACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACCCCTTTCAGGTGACTTGCGCCAGTCGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS CCA 90 bp CTGGTGGTGGCTCCCGGGTCTCAAAAGGGTTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTCGGTGCTGGATCACAGCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LVVAPGSQKGCRRQA*HTAGWVGAGSQLGP
Trigger: AGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCCGGGAGCCACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000462151.5
ENST00000570831.5
ENST00000571844.5
CDS CCA 90 bp TGGTTCCACCGACCGGAAGGGCCACAAGGATCCCCGCAGCAGCCGTaGGTTGCGCCTGCGTCTTGTCCAAAAGCTAAGACGAAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: WFHRPEGPQGSPQQP*VAPASCPKAKTKVP
Trigger: GGGCACTTTCGTCTTAGCTTTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS CCA 90 bp GGGTCTCAAAAGGGTTGTAGACGTCAAGCGTGGCATACTGCCGGCTaGGTCGGTGCTGGATCACAGCTGGGTCCTGAGGGCAGAGACCCG +
Preference number: 5 (lower is better)
Translates to: GSQKGCRRQAWHTAG*VGAGSQLGPEGRDP
Trigger: CGGGTCTCTGCCCTCAGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462151.5
ENST00000571844.5
CDS CCA 90 bp CTGGTGGTGGCTCCCGGGTCTCAAAAGGGTTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTCGGTGCTGGATCACAGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LVVAPGSQKGCRRQA*HTAGWVGAGSQLGL
Trigger: CAGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCCGGGAGCCACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS-3UTR CAA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGGCCCCAGCGGCTGCATaGGCAGCTGCGGTTCGCACC +
Preference number: 5 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQAPAAA*AAAVRT
Trigger: GGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGC...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGCCCCAGCGGCTGCATaGGCAGCTGCGGTTCGCACC +
Preference number: 5 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSAPAAA*AAAVRT
Trigger: GGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGCCCCAGCGGCTGCATaGGCAGCTGCGGTTCGCACC +
Preference number: 5 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLAPAAA*AAAVRT
Trigger: GGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGC...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp AACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGAGGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: NRSNSRGTAEGSWVGACEVMAIG*GALRRS
Trigger: GCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGAC...CTCACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 90 bp AGTAGCTCACCTCCCGGGTCTCAAAAGGGTTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTCGGTGCTGGATCACAGCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: SSSPPGSQKGCRRQA*HTAGWVGAGSQLGP
Trigger: AGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCCGGGAGGTGAGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS-3UTR CAA 90 bp TCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGCGCAGCAGCCGTGGGTaGCGCCTGCGTCTTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SGSAVMAIGLGALRRSHQRSSRG*RLRLVQ
Trigger: TTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCG...CTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS GCA 90 bp AATGCCAGTGAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: NASEEQGDQQHEHGY*CVALRHHQSRDPAT
Trigger: AGTGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTCACTGGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS GCA 90 bp AATGCCAGTGAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: NASEEQGDQQHEHGY*CVALRHHQSRDPAN
Trigger: GTTGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTCACTGGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478737.5
ENST00000572538.5
CDS CCA 90 bp TACAGAACCGGGAAGAATCAACCTGACCGCCCAAAAGAGGCCGACTaGCGCAAGTCACCTGAAAGGGGTTGTCAAGCTCGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: YRTGKNQPDRPKEAD*RKSPERGCQARWAR
Trigger: CCGAGCCCAGCGAGCTTGACAACCCCTTTCAGGTGACTTGCGCCAGTCGGCCTCTTTTGGGCGGTCAGGTTGATTCTTCCCGGTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS CCA 90 bp GGGTCTCAAAAGGGTTGTAGACGTCAAGCGTGGCATACTGCCGGCTaGGTCGGTGCTGGATCACAGCTGGGTCTGGTCTGGAGTCACTGT +
Preference number: 5 (lower is better)
Translates to: GSQKGCRRQAWHTAG*VGAGSQLGLVWSHC
Trigger: ACAGTGACTCCAGACCAGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS-3UTR CAA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACTGCTCTGAGCCATGTTaGCAACTGCGGCCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDCSEPC*QLRPPR
Trigger: CCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCA...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp ATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGGCGTGTGTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: ITEATAVAQQREAGLGRVSSAFR*SSSCFF
Trigger: GAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGA...CACACGCCCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 90 bp GGGTCTCAAAAGGGTTGTAGACGTCAAGCGTGGCATACTGCCGGCTaGGTCGGTGCTGGATCACAGCTGGGTCCTGAAAGGGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: GSQKGCRRQAWHTAG*VGAGSQLGPERGCQ
Trigger: TTGACAACCCCTTTCAGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000480219.1
ENST00000570831.5
ENST00000570960.1
CDS-3UTR CAA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGCGCAGCAGCCGTGGGTaGCGCCTGCGTCTTGTCCAA +
Preference number: 5 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKRSSRG*RLRLVQ
Trigger: TTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCG...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CAA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCCGCAGCAGCCGTGGGTaGCGCCTGCGTCTTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVRSSRG*RLRLVQ
Trigger: TTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCG...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CAA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGTTCGCACCGCAGGGTaGGAGAAGACACCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIVRTAG*EKTPAA
Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAAC...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS GCA 90 bp AGCCGTGGGTTGCGCCTGCGTCTTGTCCAAAAGCTAAGACGAAAGTaGCCCCACGTGATACCTCTAACCCAGTGCCCACAACCAACTACC +
Preference number: 5 (lower is better)
Translates to: SRGLRLRLVQKLRRK*PHVIPLTQCPQPTT
Trigger: GGTAGTTGGTTGTGGGCACTGGGTTAGAGGTATCACGTGGGGGCACTTTCGTCTTAGCTTTTGGACAAGACGCAGGCGCAACCCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CAA 90 bp ACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TPVRFSSHGHRIGSTTEESSAFR*SSSCFF
Trigger: GAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGA...CTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACCTGACAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGA +
Preference number: 5 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGTDTAV*PFGTTR
Trigger: TCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGT...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTTCGCACCGCAGGGTaGGAGAAGACACCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLVRTAG*EKTPAA
Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAAC...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: EPSVSDVSPSPRDLRDGSVMAIG*GALRRS
Trigger: GCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGAC...GCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDVMAIG*GALRRS
Trigger: GCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGAC...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS TCA 90 bp GCAGGGTTGGAGAAGACACCAGCAGCAAATTCTTGCTGGGCCTTCTaGAAGCTGGCACCTGTGCGGCGGTATAAGGAGTGGATCCGTTTC +
Preference number: 5 (lower is better)
Translates to: AGLEKTPAANSCWAF*KLAPVRRYKEWIRF
Trigger: GAAACGGATCCACTCCTTATACCGCCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CCA 90 bp GCTGGATCACAGCTGGGTCTGGTCTGGAGTCACTGTCACCCCACGTaGCGGCTCTTCCCAGGATCAAATGTCACAAATGGGGATACAAGT +
Preference number: 5 (lower is better)
Translates to: AGSQLGLVWSHCHPT*RLFPGSNVTNGDTS
Trigger: ACTTGTATCCCCATTTGTGACATTTGATCCTGGGAAGAGCCGCCACGTGGGGTGACAGTGACTCCAGACCAGACCCAGCTGTGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS-3UTR CAA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTTGCTCTGAGCCATGTTaGCAACTGCGGCCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSCSEPC*QLRPPR
Trigger: CCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCA...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGGGTAGAGGGGGCCAATaGTTCTGTCGAGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EEPSVSDVSPSPRDLRDGGRGGQ*FCRVAV
Trigger: CACAGCTACTCGACAGAACAATTGGCCCCCTCTACC...CCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAGGTAGAGGGGGCCAATaGTTCTGTCGAGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LGHSELPTRLSGSAVMAIGRGGQ*FCRVAV
Trigger: CACAGCTACTCGACAGAACAATTGGCCCCCTCTACC...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCAAGCCTGCGCCATTGTaGGTTTCCACACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPKPAPL*VSTQKL
Trigger: CAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTT...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAGCTCCCCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAG +
Preference number: 5 (lower is better)
Translates to: VMSLQVPETLGTGAKSAPPKPAP*LVSTQK
Trigger: CTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGG...GGGAGCTGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp TTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGA +
Preference number: 5 (lower is better)
Translates to: LGALRRSHQLVMSLQVPETDTAV*PFGTTR
Trigger: TCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGT...CTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGTTCGCACCGCAGGGTaGGAGAAGACACCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ALRRSHQLVMSLQVPETLVRTAG*EKTPAA
Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAAC...TAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGGTTCGCACCGCAGGGTaGGAGAAGACACCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HQLVMSLQVPETLGTGAKVRTAG*EKTPAA
Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTGCGAAC...CTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 90 bp AGCCTCCAGATCTTCCCAGGACTGACTTTTAGAGCTCAAACCATTTaGGTTGGTGGCCCTGGTGGCCCTAGAAGGATGAGGCATCCCATG +
Preference number: 5 (lower is better)
Translates to: SLQIFPGLTFRAQTI*VGGPGGPRRMRHPM
Trigger: CATGGGATGCCTCATCCTTCTAGGGCCACCAGGGCCACCAACCCAAATGGTTTGAGCTCTAAAAGTCAGTCCTGGGAAGATCTGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS-3UTR CAA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDSSAFR*SSSCFF
Trigger: GAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGA...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGGTAGAGGGGGCCAATaGTTCTGTCGAGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLGRGGQ*FCRVAV
Trigger: CACAGCTACTCGACAGAACAATTGGCCCCCTCTACC...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp GGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAG +
Preference number: 5 (lower is better)
Translates to: GALRRSHQLVMSLQVPETPKPAP*LVSTQK
Trigger: CTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGG...GGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 90 bp CTGTCACCCCACGTGGCGGCTCTTCCCAGGATCAAATGTCACAAATaGGGATACAAGTTAGCCCGACCCTACAGAACCGGGAAGAATCAA +
Preference number: 5 (lower is better)
Translates to: LSPHVAALPRIKCHK*GYKLARPYRTGKNQ
Trigger: TTGATTCTTCCCGGTTCTGTAGGGTCGGGCTAACTTGTATCCCCATTTGTGACATTTGATCCTGGGAAGAGCCGCCACGTGGGGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS-3UTR CAA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTTGCTCTGAGCCATGTTaGCAACTGCGGCCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVCSEPC*QLRPPR
Trigger: CCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCA...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCGGTAGAGGGGGCCAATaGTTCTGTCGAGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVGRGGQ*FCRVAV
Trigger: CACAGCTACTCGACAGAACAATTGGCCCCCTCTACC...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp AGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAAAGCCTGCGCCATTGTaGGTTTCCACACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RSHQLVMSLQVPETLGTGKPAPL*VSTQKL
Trigger: CAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTT...TCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACAAGCCTGCGCCATTGTaGGTTTCCACACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDKPAPL*VSTQKL
Trigger: CAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTT...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp ACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAG +
Preference number: 5 (lower is better)
Translates to: TEEPSVSDVSPSPRDLRDPKPAP*LVSTQK
Trigger: CTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGG...GTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RRSHQLVMSLQVPETLGTTSSKF*LGLLKA
Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...CGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CTAGGTCACAGTGAACTCCCCACACGCCTGTCAGGTTCAGCAGTCATGGCCATAACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LGHSELPTRLSGSAVMAITSSKF*LGLLKA
Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...TATGGCCATGACTGCTGAACCTGACAGGCGTGTGGGGAGTTCACTGTGACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS GCA 90 bp GCTAACTTGTCTCACTGGCAAACCCTTCCCTTCCTTGAACTCCTATaGTCTCCAGTAGCTCACCTCCCGGGTCTCAAAAGGGTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: ANLSHWQTLPFLELL*SPVAHLPGLKRVVD
Trigger: GTCTACAACCCTTTTGAGACCCGGGAGGTGAGCTACTGGAGAGCATAGGAGTTCAAGGAAGGGAAGGGTTTGCCAGTGAGACAAGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS-3UTR CAA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGATGCTCTGAGCCATGTTaGCAACTGCGGCCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGCSEPC*QLRPPR
Trigger: CCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCA...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HRIGSTTEEPSVSDVSPSSSAFR*SSSCFF
Trigger: GAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGA...ACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAAAGCCTGCGCCATTGTaGGTTTCCACACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSKPAPL*VSTQKL
Trigger: CAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTT...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp TATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTGGGCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAG +
Preference number: 5 (lower is better)
Translates to: YLNNRSNSRGTAEGSWVGPKPAP*LVSTQK
Trigger: CTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGG...CCCAACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTTTCTCTGTGCACGGATaGGTTCCACCGACCGGAAGG +
Preference number: 5 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVFSVHG*VPPTGR
Trigger: CCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAA...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CAA 90 bp GGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCTCTCCAAGTCCCAGAGACAGTCTTCTGAAATTCTaGGGGGATCTCCATGGAGAT +
Preference number: 5 (lower is better)
Translates to: GSTTEEPSVSDVSPSPRDSLLKF*GDLHGD
Trigger: ATCTCCATGGAGATCCCCCAAGAATTTCAGAAGACT...GTCTCTGGGACTTGGAGAGACATCACTAACTGATGGCTCCTCCGTAGTGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGA +
Preference number: 5 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVTDTAV*PFGTTR
Trigger: TCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGT...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CAGTTAGTGATGTCTCTCCAAGTCCCAGAGACCTTAGGGACGGGAGCTAAGTCAACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: QLVMSLQVPETLGTGAKSTSSKF*LGLLKA
Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...TGACTTAGCTCCCGTCCCTAAGGTCTCTGGGACTTGGAGAGACATCACTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS GCA 90 bp CTCTCTCAGGGAACTAAGATCACAGTGCCTCTTCCTTCCTGTGCATaGAGAAAAGTCCCCTGTACCCAAGCTAACTTGTCTCACTGGCAA +
Preference number: 5 (lower is better)
Translates to: LSQGTKITVPLPSCA*RKVPCTQANLSHWQ
Trigger: TTGCCAGTGAGACAAGTTAGCTTGGGTACAGGGGACTTTTCTGCATGCACAGGAAGGAAGAGGCACTGTGATCTTAGTTCCCTGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS-3UTR CAA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGATTCTCTGTGCACGGATaGGTTCCACCGACCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGFSVHG*VPPTGR
Trigger: CCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAA...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS-3UTR CAA 90 bp GGTTCAGCAGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAAGTCTTCTGAAATTCTaGGGGGATCTCCATGGAGAT +
Preference number: 5 (lower is better)
Translates to: GSAVMAIGLGALRRSHQLSLLKF*GDLHGD
Trigger: ATCTCCATGGAGATCCCCCAAGAATTTCAGAAGACT...TAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACTGCTGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAGTCATGGCCATAGGATaGGGAGCACTACGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGVMAIG*GALRRS
Trigger: GCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGAC...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp AGTCATGGCCATAGGATTGGGAGCACTACGGAGGAGCCATCAGTTAGTGATGTCAGTCTTCTGAAATTCTaGGGGGATCTCCATGGAGAT +
Preference number: 5 (lower is better)
Translates to: SHGHRIGSTTEEPSVSDVSLLKF*GDLHGD
Trigger: ATCTCCATGGAGATCCCCCAAGAATTTCAGAAGACT...GACATCACTAACTGATGGCTCCTCCGTAGTGCTCCCAATCCTATGGCCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS-3UTR CAA 90 bp TTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGCTGGGTTACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FYLNNRSNSRGTAEGSWVTSSKF*LGLLKA
Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...AACCCAGCTTCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS GCA 90 bp AGTGGGACAAACAGGTGTAGTCCTCCTCATTCCTTGCTTTCAAACTaGACACCTAACCTAAACTCCAACCAGCCCCAACCTTTATTTTCT +
Preference number: 5 (lower is better)
Translates to: SGTNRCSPPHSLLSN*TPNLNSNQPQPLFS
Trigger: AGAAAATAAAGGTTGGGGCTGGTTGGAGTTTAGGTTAGGTGTGCAGTTTGAAAGCAAGGAATGAGGAGGACTACACCTGTTTGTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS-3UTR CAA 90 bp CCACTTTCTTTTTATTTAAATAACCGAAGCAACAGCCGTGGCACAGCAGAGGGAAGTCTTCTGAAATTCTaGGGGGATCTCCATGGAGAT +
Preference number: 5 (lower is better)
Translates to: PLSFYLNNRSNSRGTAEGSLLKF*GDLHGD
Trigger: ATCTCCATGGAGATCCCCCAAGAATTTCAGAAGACT...TCCCTCTGCTGTGCCACGGCTGTTGCTTCGGTTATTTAAATAAAAAGAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000570831.5
ENST00000573013.1
CDS CCA 72 bp GGCCTGCCCAGTGTGAGCAGACGGAGATGTGAGCCCTaGGCCCCAGGACTGGCCCTTCTCCCCAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: GLPSVSRRRCEP*APGLALLPSPH
Trigger: GTGAGGGCTGGGGAGAAGGGCCAGTCCTGGGGCCCAGGGCTCACATCTCCGTCTGCTCACACTGGGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490999.5
ENST00000574126.5
CDS TCA 72 bp CTGGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCTaGGCCATGTTTGCAACTGCGGCCTCCGCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LGSANGFPPSLL*AMFATAASAAL
Trigger: GAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000465312.5
ENST00000480219.1
ENST00000497470.1
ENST00000570831.5
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
ENST00000576213.5
CDS TCA 72 bp CAGCTGAGGCCTGCCCAGTGTGAGCAGACGGAGATGTaGGCCCTGGGCCCCAGGACTGGCCCTTCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: QLRPAQCEQTEM*ALGPRTGPSPQ
Trigger: CTGGGGAGAAGGGCCAGTCCTGGGGCCCAGGGCTCACATCTCCGTCTGCTCACACTGGGCAGGCCTCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490999.5
ENST00000574126.5
CDS GCA 72 bp GCTCGCTGGGCTCGGCGAACGGGTTTCCGCCGTCTCTaGTCTGAGCCATGTTTGCAACTGCGGCCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: ARWARRTGFRRL*SEPCLQLRPPR
Trigger: CCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000465312.5
ENST00000480219.1
ENST00000497470.1
ENST00000570831.5
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
ENST00000576213.5
CDS CCA 72 bp GGCATACTGCCGGCTGGGTCGGTGCTGGATCACAGCTaGGTCCTGAGGGCAGAGACCCGGGTCTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GILPAGSVLDHS*VLRAETRVSAG
Trigger: GCCAGCTGAGACCCGGGTCTCTGCCCTCAGGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462151.5
ENST00000571844.5
CDS TCA 72 bp TCAGCTGTGGCTGCTGCAGCTGAGGCCTGCCCAGTGTaGGCAGACGGAGATGTGAGCCCTGGGCCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SAVAAAAEACPV*ADGDVSPGPQD
Trigger: GTCCTGGGGCCCAGGGCTCACATCTCCGTCTGCTCACACTGGGCAGGCCTCAGCTGCAGCAGCCACAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490999.5
ENST00000574126.5
CDS CAA 72 bp CGAACGGGTTTCCGCCGTCTCTGCTCTGAGCCATGTTaGCAACTGCGGCCTCCGCGGCCCTCTGCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RTGFRRLCSEPC*QLRPPRPSALH
Trigger: GTGGAGGGCAGAGGGCCGCGGAGGCCGCAGTTGCAAACATGGCTCAGAGCAGAGACGGCGGAAACCCGTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000465312.5
ENST00000480219.1
ENST00000497470.1
ENST00000570831.5
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
ENST00000576213.5
CDS CCA 72 bp CTCGCCTCAGTTCGCCCCGCTTCTCTGTGCACGGATTaGTTCCACCGACCGGAAGGGCCACAAGGATCCCCG +
Preference number: 6 (lower is better)
Translates to: LASVRPASLCTD*FHRPEGPQGSP
Trigger: CGGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS CAA 72 bp GCCCGGAAGGCATTTTCAGCAGCCCCAGCGGCTGCATaGGCAGCTGCGGTTCGCACCGCAGGGTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ARKAFSAAPAAA*AAAVRTAGLEK
Trigger: CTTCTCCAACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCTGAAAATGCCTTCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CAA 90 bp GTCCACTTCACTCGCCTCAGTTCGCCCCGCTTCTCTGTGCACGGATaGGTTCCACCGACCGGAAGGGCCACAAGGATCCCCGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: VHFTRLSSPRFSVHG*VPPTGRATRIPAAA
Trigger: GGCTGCTGCGGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS CCA 72 bp CGACCGGAAGGGCCACAAGGATCCCCGCAGCAGCCGTaGGTTGCGCCTGCGTCTTGTCCAAAAGCTAAGACG +
Preference number: 6 (lower is better)
Translates to: RPEGPQGSPQQP*VAPASCPKAKT
Trigger: CGTCTTAGCTTTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGATCCTTGTGGCCCTTCCGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS CCA 72 bp CCCGGAAGGCATTTTCAGCAGCCCCAGCGGCTGCATTaGCAGCTGCGGTTCGCACCGCAGGGTTGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: PGRHFQQPQRLH*QLRFAPQGWRR
Trigger: TCTTCTCCAACCCTGCGGTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCTGAAAATGCCTTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CCA 72 bp AGGCTGGTGGTGGCTGAAAGGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: RLVVAERGCQAR*ARRTGFRRLCS
Trigger: AGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACCCCTTTCAGCCACCACCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355379.3
ENST00000465312.5
ENST00000573013.1
ENST00000576213.5
CDS CAA 72 bp ACTCGCCTCAGTTCGCCCCGCTTCTCTGTGCACGGATaGGTTCCACCGACCGGAAGGGCCACAAGGATCCCC +
Preference number: 6 (lower is better)
Translates to: TRLSSPRFSVHG*VPPTGRATRIP
Trigger: GGGGATCCTTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS GCA 72 bp AGGGACCATTCCCAAACTGCCTGTGGCTCCAAGTACTaGACCTTCGGGGCCACGCCGTTGTCCCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: RDHSQTACGSKY*TFGATPLSQDW
Trigger: CCAGTCCTGGGACAACGGCGTGGCCCCGAAGGTGCAGTACTTGGAGCCACAGGCAGTTTGGGAATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462151.5
ENST00000571844.5
CDS GCA 72 bp CTGAGGGCAGAGACCCGGGTCTCAGCTGGCACCCAGTaGCACCTAGGGGAATTCCCAGGGACCATTCCCAAA +
Preference number: 6 (lower is better)
Translates to: LRAETRVSAGTQ*HLGEFPGTIPK
Trigger: TTTGGGAATGGTCCCTGGGAATTCCCCTAGGTGGCACTGGGTGCCAGCTGAGACCCGGGTCTCTGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462151.5
ENST00000571844.5
CDS CCA 72 bp TCACAGCTGGGTCCTGAAAGGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SQLGPERGCQAR*ARRTGFRRLCS
Trigger: AGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACCCCTTTCAGGACCCAGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302631.8
ENST00000480219.1
ENST00000570831.5
ENST00000570960.1
CDS CCA 72 bp TGGCGCAAGTCACCTGAAAGGGGTTGTCAAGCTCGCTaGGCTCGGCGAACGGGTTTCCGCCGTCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: WRKSPERGCQAR*ARRTGFRRLCS
Trigger: AGAGCAGAGACGGCGGAAACCCGTTCGCCGAGCCCAGCGAGCTTGACAACCCCTTTCAGGTGACTTGCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS GCA 72 bp TCCACTTCACTCGCCTCAGTTCGCCCCGCTTCTCTGTaGACGGATTGGTTCCACCGACCGGAAGGGCCACAA +
Preference number: 6 (lower is better)
Translates to: STSLASVRPASL*TDWFHRPEGPQ
Trigger: TTGTGGCCCTTCCGGTCGGTGGAACCAATCCGTGCACAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000480219.1
ENST00000497470.1
ENST00000570960.1
ENST00000573013.1
ENST00000573279.1
CDS CCA 72 bp GCTCCCGGGTCTCAAAAGGGTTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTCGGTGCTGGATCACAG +
Preference number: 6 (lower is better)
Translates to: APGSQKGCRRQA*HTAGWVGAGSQ
Trigger: CTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302631.8
ENST00000462151.5
ENST00000497470.1
ENST00000570831.5
ENST00000571844.5
ENST00000573279.1
CDS CCA 72 bp CCTCCCGGGTCTCAAAAGGGTTGTAGACGTCAAGCGTaGCATACTGCCGGCTGGGTCGGTGCTGGATCACAG +
Preference number: 6 (lower is better)
Translates to: PPGSQKGCRRQA*HTAGWVGAGSQ
Trigger: CTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGTCTACAACCCTTTTGAGACCCGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS CCA 72 bp ACGTCAAGCGTGGCATACTGCCGGCTGGGTCGGTGCTaGATCACAGCTGGGTCTGGTCTGGAGTCACTGTCA +
Preference number: 6 (lower is better)
Translates to: TSSVAYCRLGRC*ITAGSGLESLS
Trigger: TGACAGTGACTCCAGACCAGACCCAGCTGTGATCCAGCACCGACCCAGCCGGCAGTATGCCACGCTTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS CAA 72 bp CGGAAGGGCCACAAGGATCCCCGCAGCAGCCGTGGGTaGCGCCTGCGTCTTGTCCAAAAGCTAAGACGAAAG +
Preference number: 6 (lower is better)
Translates to: RKGHKDPRSSRG*RLRLVQKLRRK
Trigger: CTTTCGTCTTAGCTTTTGGACAAGACGCAGGCGCAACCCACGGCTGCTGCGGGGATCCTTGTGGCCCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000573013.1
CDS CAA 72 bp AGGGCGACCAGCAGCATGAGCACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCA +
Preference number: 6 (lower is better)
Translates to: RATSSMSTDTAV*PFGTTRAEIQP
Trigger: TGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CAA 90 bp TGCTGCAGCTCTCGCTCCCTTCGGTCCAACTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTCAGCAGCTCAGCTGTGGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: CCSSRSLRSNSSAFR*SSSCFFSSSAVAAA
Trigger: TGCAGCAGCCACAGCTGAGCTGCTGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGAAGGGAGCGAGAGCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000497470.1
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000573279.1
ENST00000574126.5
ENST00000576213.5
CDS CAA 90 bp GTGAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCACTGAATCCC +
Preference number: 6 (lower is better)
Translates to: VKSRATSSMSTDTAV*PFGTTRAEIQPLNP
Trigger: GGGATTCAGTGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000490999.5
ENST00000570831.5
ENST00000573013.1
ENST00000574126.5
CDS CAA 90 bp GTGAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCACTGGGATAC +
Preference number: 6 (lower is better)
Translates to: VKSRATSSMSTDTAV*PFGTTRAEIQPLGY
Trigger: GTATCCCAGTGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472397.5
ENST00000572736.5
CDS TCA 72 bp GTTAGCCCGACCCTACAGAACCGGGAAGAATCAACCTaGCCGCCCAAAAGAGGCCGACTGGCGCAAGTCACC +
Preference number: 6 (lower is better)
Translates to: VSPTLQNREEST*PPKRGRLAQVT
Trigger: GGTGACTTGCGCCAGTCGGCCTCTTTTGGGCGGTCAGGTTGATTCTTCCCGGTTCTGTAGGGTCGGGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS GCA 72 bp GAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTaGTGTGTTGCCCTTCGGCACCACCAGAGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: EEQGDQQHEHGY*CVALRHHQSRD
Trigger: ATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CAA 72 bp CACCGCAGGGTTGGAGAAGACACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCTGGCACCTGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: HRRVGEDTSSKF*LGLLKAGTCAA
Trigger: CGCCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000472397.5
ENST00000478737.5
ENST00000490999.5
ENST00000570831.5
ENST00000572538.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
CDS CAA 90 bp GTGAAGAGCAGGGCGACCAGCAGCATGAGCACGGATACTGCTGTGTaGCCCTTCGGCACCACCAGAGCAGAGATCCAGCCAACATCCAGA +
Preference number: 6 (lower is better)
Translates to: VKSRATSSMSTDTAV*PFGTTRAEIQPTSR
Trigger: TCTGGATGTTGGCTGGATCTCTGCTCTGGTGGTGCCGAAGGGCAACACAGCAGTATCCGTGCTCATGCTGCTGGTCGCCCTGCTCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478737.5
ENST00000572538.5
CDS CCA 72 bp GGGAAGAATCAACCTGACCGCCCAAAAGAGGCCGACTaGCGCAAGTCACCTGAAAGGGGTTGTCAAGCTCGC +
Preference number: 6 (lower is better)
Translates to: GKNQPDRPKEAD*RKSPERGCQAR
Trigger: GCGAGCTTGACAACCCCTTTCAGGTGACTTGCGCCAGTCGGCCTCTTTTGGGCGGTCAGGTTGATTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS CCA 72 bp CAGCTGGGTCTGGTCTGGAGTCACTGTCACCCCACGTaGCGGCTCTTCCCAGGATCAAATGTCACAAATGGG +
Preference number: 6 (lower is better)
Translates to: QLGLVWSHCHPT*RLFPGSNVTNG
Trigger: CCCATTTGTGACATTTGATCCTGGGAAGAGCCGCCACGTGGGGTGACAGTGACTCCAGACCAGACCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS CAA 72 bp TCTCGCTCCCTTCGGTCCAACTCCTCTGCCTTCCGGTaGAGCTCCTCCTGTTTCTTCAGCAGCTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SRSLRSNSSAFR*SSSCFFSSSAV
Trigger: CACAGCTGAGCTGCTGAAGAAACAGGAGGAGCTCAACCGGAAGGCAGAGGAGTTGGACCGAAGGGAGCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000497470.1
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000573279.1
ENST00000574126.5
ENST00000576213.5
CDS CAA 72 bp ACCCAGAGGATAGAAAGCCCAAAGCCTGCGCCATTGTaGGTTTCCACACAGAAGCTGGCCAGGCAGGCGAGG +
Preference number: 6 (lower is better)
Translates to: TQRIESPKPAPL*VSTQKLARQAR
Trigger: CCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCTATCCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
ENST00000576213.5
CDS CAA 72 bp AGGACCCAGAGGATAGAAAGCCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAGCTGGCCAGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: RTQRIESPKPAP*LVSTQKLARQA
Trigger: CGCCTGCCTGGCCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCTATCCTCTGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
ENST00000576213.5
CDS GCA 72 bp AGACGAAAGTGCCCCCACGTGATACCTCTAACCCAGTaGCCACAACCAACTACCGCCCCTCTTCCATGTGAC +
Preference number: 6 (lower is better)
Translates to: RRKCPHVIPLTQ*PQPTTAPLPCD
Trigger: GTCACATGGAAGAGGGGCGGTAGTTGGTTGTGGGCACTGGGTTAGAGGTATCACGTGGGGGCACTTTCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS CCA 72 bp CAAAGCCTGCGCCATTGTTGGTTTCCACACAGAAGCTaGCCAGGCAGGCGAGGAAGTTCAGGAGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: QSLRHCWFPHRS*PGRRGSSGEEP
Trigger: TGGCTCTTCTCCTGAACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
ENST00000576213.5
CDS CAA 90 bp GTGAAAAGGAGGACCCAGAGGATAGAAAGCCCAAAGCCTGCGCCATaGTTGGTTTCCACACAGAAGCTGGCCAGGCAGGCGAGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: VKRRTQRIESPKPAP*LVSTQKLARQARKF
Trigger: GAACTTCCTCGCCTGCCTGGCCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCTATCCTCTGGGTCCTCCTTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
ENST00000576213.5
CDS CCA 72 bp CACGTGGCGGCTCTTCCCAGGATCAAATGTCACAAATaGGGATACAAGTTAGCCCGACCCTACAGAACCGGG +
Preference number: 6 (lower is better)
Translates to: HVAALPRIKCHK*GYKLARPYRTG
Trigger: CCCGGTTCTGTAGGGTCGGGCTAACTTGTATCCCCATTTGTGACATTTGATCCTGGGAAGAGCCGCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497470.1
ENST00000573279.1
CDS TCA 72 bp CCCTCACCTGCACACCTCCTGTACCTGAGTGCTGTATaGGCCATAGTTCTTAGGTTCTGTGGGGCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: PSPAHLLYLSAV*AIVLRFCGAEL
Trigger: AAGCTCAGCCCCACAGAACCTAAGAACTATGGCTCATACAGCACTCAGGTACAGGAGGTGTGCAGGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490999.5
ENST00000574126.5
CDS GCA 72 bp GAAAAGGAGGACCCAGAGGATAGAAAGCCCAAAGCCTaGGCCATTGTTGGTTTCCACACAGAAGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: EKEDPEDRKPKA*AIVGFHTEAGQ
Trigger: CTGGCCAGCTTCTGTGTGGAAACCAACAATGGCGCAGGCTTTGGGCTTTCTATCCTCTGGGTCCTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000302631.8
ENST00000355379.3
ENST00000462151.5
ENST00000465312.5
ENST00000472397.5
ENST00000490999.5
ENST00000570831.5
ENST00000571844.5
ENST00000572736.5
ENST00000573013.1
ENST00000574126.5
ENST00000576213.5
CDS GCA 72 bp TTGCGCCTGCGTCTTGTCCAAAAGCTAAGACGAAAGTaGCCCCACGTGATACCTCTAACCCAGTGCCCACAA +
Preference number: 6 (lower is better)
Translates to: LRLRLVQKLRRK*PHVIPLTQCPQ
Trigger: TTGTGGGCACTGGGTTAGAGGTATCACGTGGGGGCACTTTCGTCTTAGCTTTTGGACAAGACGCAGGCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355379.3
ENST00000573013.1
CDS CCA 72 bp ATCTTCCCAGGACTGACTTTTAGAGCTCAAACCATTTaGGTTGGTGGCCCTGGTGGCCCTAGAAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: IFPGLTFRAQTI*VGGPGGPRRMR
Trigger: CCTCATCCTTCTAGGGCCACCAGGGCCACCAACCCAAATGGTTTGAGCTCTAAAAGTCAGTCCTGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS CAA 90 bp CTTCCTTCCTGTGCATGCAGAAAAGTCCCCTGTACCCAAGCTAACTaGTCTCACTGGCAAACCCTTCCCTTCCTTGAACTCCTATGCTCT +
Preference number: 6 (lower is better)
Translates to: LPSCACRKVPCTQAN*SHWQTLPFLELLCS
Trigger: AGAGCATAGGAGTTCAAGGAAGGGAAGGGTTTGCCAGTGAGACAAGTTAGCTTGGGTACAGGGGACTTTTCTGCATGCACAGGAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS GCA 72 bp GGAACTAAGATCACAGTGCCTCTTCCTTCCTGTGCATaGAGAAAAGTCCCCTGTACCCAAGCTAACTTGTCT +
Preference number: 6 (lower is better)
Translates to: GTKITVPLPSCA*RKVPCTQANLS
Trigger: AGACAAGTTAGCTTGGGTACAGGGGACTTTTCTGCATGCACAGGAAGGAAGAGGCACTGTGATCTTAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS CCA 72 bp AGAAAAGTCCCCTGTACCCAAGCTAACTTGTCTCACTaGCAAACCCTTCCCTTCCTTGAACTCCTATGCTCT +
Preference number: 6 (lower is better)
Translates to: RKVPCTQANLSH*QTLPFLELLCS
Trigger: AGAGCATAGGAGTTCAAGGAAGGGAAGGGTTTGCCAGTGAGACAAGTTAGCTTGGGTACAGGGGACTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1
CDS CAA 72 bp TCCAGTGGGACAAACAGGTGTAGTCCTCCTCATTCCTaGCTTTCAAACTGCACACCTAACCTAAACTCCAAC +
Preference number: 6 (lower is better)
Translates to: SSGTNRCSPPHS*LSNCTPNLNSN
Trigger: GTTGGAGTTTAGGTTAGGTGTGCAGTTTGAAAGCAAGGAATGAGGAGGACTACACCTGTTTGTCCCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480219.1
ENST00000570960.1