RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAI (Homo sapiens)

Ensembl gene IDs: ENSG00000173611

Ensembl transcript IDs: ENST00000336505.11, ENST00000373549.8, ENST00000467917.5, ENST00000477186.5, ENST00000487795.1, ENST00000494102.2

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAGTGAAGAGGCTACCTCGCTGAGATTGATCTTAAAACAACGGTaGAAGCCTCCAGCTTCTCTCAGGCATTCAAATGCTGACCATCAC +
Preference number: 1 (lower is better)
Translates to: ESEEATSLRLILKQR*KPPASLRHSNADHH
Trigger: GTGATGGTCAGCATTTGAATGCCTGAGAGAAGCTGGAGGCTTTCACCGTTGTTTTAAGATCAATCTCAGCGAGGTAGCCTCTTCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR TCA 90 bp GGTTTTGAATCACTGGCAATGGCCAAATTAGCAGACCTTGGTACCTaGCTATATTTCCAGTCCAGAGTGTTCTCTGTATATCAGGCTGAT +
Preference number: 1 (lower is better)
Translates to: GFESLAMAKLADLGT*LYFQSRVFSVYQAD
Trigger: ATCAGCCTGATATACAGAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCCATTGCCAGTGATTCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 90 bp CGAACATCCAGAATGGATGCTAATTCCAAAATGTGCTTCTGGAGATaGGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGAT +
Preference number: 1 (lower is better)
Translates to: RTSRMDANSKMCFWR*GFSTVSSLGSCGYD
Trigger: ATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTGGAATTAGCATCCATTCTGGATGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
3UTR CCA 90 bp TTGGAACCAAGAGTCCAAATTACAGAATCAGAGTTGGAGAAGACCTaGGCCAACCTCTTCATTTTACAGATGAGAGTGCTAACAAGCAGA +
Preference number: 1 (lower is better)
Translates to: LEPRVQITESELEKT*ANLFILQMRVLTSR
Trigger: TCTGCTTGTTAGCACTCTCATCTGTAAAATGAAGAGGTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAATTTGGACTCTTGGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 90 bp GATCTATTGAACGTGAATGAGTCAGTAGCTGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTTGACACTTTTCCCATAGGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: DLLNVNESVAGQYHG*FFEDILDTFPIGLC
Trigger: GCAGAGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATTGCCCAGCTACTGACTCATTCACGTTCAATAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR TCA 90 bp GAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATaGTTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTGCATCCT +
Preference number: 1 (lower is better)
Translates to: EMRILHCFIPWQLWI*FWIISCFPKNLVHP
Trigger: AGGATGCACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
3UTR GCA 90 bp TTTTTCGAAGATATTCTTGACACTTTTCCCATAGGCCTCTGCGCATaGTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGT +
Preference number: 1 (lower is better)
Translates to: FFEDILDTFPIGLCA*LTIQRQIGRPLEDC
Trigger: ACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR TCA 90 bp AGAGATGAGAGACTATCAGAATCTCCAGGGACAGTTTGTGCAATTTaGAAACAAAGGAGTGCTTTTTCCCTTTGCTTTGCTCTGTTCTTA +
Preference number: 1 (lower is better)
Translates to: RDERLSESPGTVCAI*KQRSAFSLCFALFL
Trigger: TAAGAACAGAGCAAAGCAAAGGGAAAAAGCACTCCTTTGTTTTCAAATTGCACAAACTGTCCCTGGAGATTCTGATAGTCTCTCATCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 90 bp CAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTaGAGAGGCTACCTCGCTGAGATTGATCTGATAATAAATGTTGAA +
Preference number: 1 (lower is better)
Translates to: QRQIGRPLEDCSKRE*RGYLAEIDLIINVE
Trigger: TTCAACATTTATTATCAGATCAATCTCAGCGAGGTAGCCTCTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR CCA 90 bp AAGGTTGTGTACACTACAAACAGGGTAAATAGTTCTCTTGGTGGTTaGAGTGGGGAAATCAATATTTTTGGAACCAAGAGTCCAAATTAC +
Preference number: 1 (lower is better)
Translates to: KVVYTTNRVNSSLGG*SGEINIFGTKSPNY
Trigger: GTAATTTGGACTCTTGGTTCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTTTGTAGTGTACACAACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CCA 90 bp ACTCTACTTCATGTGCGAATATATCATCAACTTGCAGAACACAAGTaGTCTCATAGAGACACAGCAATACGAGTGAAGGCATTTTATTCA +
Preference number: 1 (lower is better)
Translates to: TLLHVRIYHQLAEHK*SHRDTAIRVKAFYS
Trigger: TGAATAAAATGCCTTCACTCGTATTGCTGTGTCTCTATGAGACCACTTGTGTTCTGCAAGTTGATGATATATTCGCACATGAAGTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 90 bp CTCTATCAGGAAAACTCCAGCCACAATTGGATTGCACTTTGCTTCTaGAATCCTGAAACGTTTCAATTTGGTAAAAATAAAGAGGGTACA +
Preference number: 1 (lower is better)
Translates to: LYQENSSHNWIALCF*NPETFQFGKNKEGT
Trigger: TGTACCCTCTTTATTTTTACCAAATTGAAACGTTTCAGGATTTCAGAAGCAAAGTGCAATCCAATTGTGGCTGGAGTTTTCCTGATAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 90 bp TACCTGACTATATTTCCAGTCCAGAGTGTTCTCTGTATATCAGGCTaGTTACAAGTCTCCATAAATAAAATTTTTCAGCTGGGTCCAAAC +
Preference number: 1 (lower is better)
Translates to: YLTIFPVQSVLCISG*LQVSINKIFQLGPN
Trigger: GTTTGGACCCAGCTGAAAAATTTTATTTATGGAGACTTGTAATCAGCCTGATATACAGAGAACACTCTGGACTGGAAATATAGTCAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CCA 90 bp ATATGGATCAAGAAAATAAAGGACTACTACAGCCTAAGAATCTGCTaGTGTCTCAGTTTCACATACTTAGGTTTTTCAGGTTATATCACT +
Preference number: 1 (lower is better)
Translates to: IWIKKIKDYYSLRIC*CLSFTYLGFSGYIT
Trigger: AGTGATATAACCTGAAAAACCTAAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATTTTCTTGATCCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGCAGCCACAAACTCCTaGGCTCAAGTGACCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLAATNS*AQVTLP
Trigger: TGGGAGGGTCACTTGAGCCCAGGAGTTTGTGGCTGC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGGCAGGAAAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLGRKIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTTTCCTGCC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp CTCTGCGCATGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTGGCAGGCAGATCTCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LCACLTIQRQIGRPLEDCGRQIS*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGAGATCTGCCTGCC...ACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCTAGCTCTATCACTATaGATAGCTTTTTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLLALSL*IAFWVS
Trigger: TGAGACCCAAAAAGCTATTCATAGTGATAGAGCTAG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAGGCTGCAGTGAGCCATaGATGTACCGCTGCACCCCA +
Preference number: 2 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGGCSEP*MYRCTP
Trigger: TGGGGTGCAGCGGTACATTCATGGCTCACTGCAGCC...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAATTTGAGGCTGCAGTaGGCCATGAATGTACCGCTG +
Preference number: 2 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSNLRLQ*AMNVPL
Trigger: CAGCGGTACATTCATGGCTCACTGCAGCCTCAAATT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTGAGGTTGCAGTGAGCTaGGATCCTGCCACCACACTG +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILEVAVS*DPATTL
Trigger: CAGTGTGGTGGCAGGATCTCAGCTCACTGCAACCTC...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp GCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGTCCCGAAAAATCTTGTaGATCCTCATGGTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: ASGDEDSPLFHPLAVVDMSRKIL*ILMVAE
Trigger: TTCAGCCACCATGAGGATGCACAAGATTTTTCGGGA...CATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
3UTR-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTTACAGAATCAGAGTTaGAGAAGACCTGGGCCAACC +
Preference number: 2 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLLQNQS*RRPGPT
Trigger: GGTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTTGAGCCCAGGAGTTTaGGGCCAGCCTGCTCAACAA +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILLSPGV*GQPAQQ
Trigger: TTGTTGAGCAGGCTGGCCTCAAACTCCTGGGCTCAA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTGTTTGCTTCCCCAATaGCCAGAAGAAAATCTGGAG +
Preference number: 2 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLCLLPQ*PEENLE
Trigger: CTCCAGATTTTCTTCTGGGCATTGGGGAAGCAAACA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp CTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCTTTCCCATAGGCCTCTaGGCATGCTTGACAATCCAG +
Preference number: 2 (lower is better)
Translates to: LFHPLAVVDMILDNFVFPFPIGL*ACLTIQ
Trigger: CTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAA...GGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCCAGCCACAATTGGATTaGACTTTGCTTCTGAAATCC +
Preference number: 2 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLQPQLD*TLLLKS
Trigger: GGATTTCAGAAGCAAAGTGCAATCCAATTGTGGCTG...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 90 bp CCAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTaGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAA +
Preference number: 2 (lower is better)
Translates to: PKCASGDEDSPLFHP*AVVDMILDNFVFPE
Trigger: TTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
3UTR-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGTGGGGAGGTGGTTTTaGATCACTGGCAATGGCCAA +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSVGRWF*ITGNGQ
Trigger: TTGGCCATTGCCAGTGATTCAAAACCACCTCCCCAC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCATTTACCTAGGGCCATaGGAAAGAGATATCAAAAGC +
Preference number: 2 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSIYLGP*ERDIKS
Trigger: GCTTTTGATATCTCTTTCCCATGGCCCTAGGTAAAT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAGTTCTCTTGGTGGTTaGAGTGGGGAAATCAATATT +
Preference number: 2 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSSSLGG*SGEINI
Trigger: AATATTGATTTCCCCACTCCAACCACCAAGAGAACT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCAAGAAATACAGAAGCTaGGTAAGGTACAAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLKKYRS*VRYKED
Trigger: ATCCTCCTTGTACCTTACCCAGCTTCTGTATTTCTT...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTGGTGAGAAGATTGCCTaGATCCAGGAATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILGEKIA*IQEFEA
Trigger: AGCCTCAAATTCCTGGATTCAGGCAATCTTCTCACC...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAAGCAGTCTGAGCTACTaGGAAGACTGGGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLSSLSY*EDWAEM
Trigger: CATCTCAGCCCAGTCTTCTCAGTAGCTCAGACTGCT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp CCAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT +
Preference number: 2 (lower is better)
Translates to: PKCASGDEDSPLFHPLAVGQYHG*FFEDIL
Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...AACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR-3UTR GCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCCGAAGATAGTCTATTaGTGTAGTTCAATGAACACT +
Preference number: 2 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSPKIVY*CSSMNT
Trigger: AGTGTTCATTGAACTACAGCAATAGACTATCTTCGG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCATTTTCAGTAGTCCATaGTGGCTAGCTTCATCATTA +
Preference number: 2 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSIFSSP*WLASSL
Trigger: TAATGATGAAGCTAGCCACCATGGACTACTGAAAAT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 90 bp GCTCAAGCCCATTGGGCAACTGTCCTTTTAGATAATTCTTCTCCCTaGATTAAAGAAATACAGAAGCTGGGTAAGGTACAAGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: AQAHWATVLLDNSSP*IKEIQKLGKVQGGF
Trigger: AAATCCTCCTTGTACCTTACCCAGCTTCTGTATTTCTTTAATCAAGGGAGAAGAATTATCTAAAAGGACAGTTGCCCAATGGGCTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGCAGACCTTGGTACCTaGCTATATTTCCAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSADLGT*LYFQSR
Trigger: TCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp AAATTCGTCTTTAATAATGTTCTTTGCCTACCCGAAAAATCTTGTGCATCCTCATTTCCCATAGGCCTCTaGGCATGCTTGACAATCCAG +
Preference number: 2 (lower is better)
Translates to: KFVFNNVLCLPEKSCASSFPIGL*ACLTIQ
Trigger: CTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAA...TGAGGATGCACAAGATTTTTCGGGTAGGCAAAGAACATTATTAAAGACGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTCAGCTCAAGCCCATTaGGCAACTGTCCTTTTAGAT +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILSAQAH*ATVLLD
Trigger: ATCTAAAAGGACAGTTGCCCAATGGGCTTGAGCTGA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp GACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGTCTGATAATAAATGTTaGATAGCACTTTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: DNPETNRKAIRGLFKKRVSDNKC*IALWEA
Trigger: GGCCTCCCAAAGTGCTATTCAACATTTATTATCAGA...CACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTATCTTTTACTCAGGGTaGGGAGGTGGTTTTGAATCA +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILIFYSG*GGGFES
Trigger: TGATTCAAAACCACCTCCCCACCCTGAGTAAAAGAT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTATGGCTTTACAACGGTTaGGGTCAGAGGTCACATTCA +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLWLYNG*GQRSHS
Trigger: TGAATGTGACCTCTGACCCCAACCGTTGTAAAGCCA...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATATCCACAAGGAGCCTaGGTCAGTTCCATGAATTTT +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSYPQGA*VSSMNF
Trigger: AAAATTCATGGAACTGACTCAGGCTCCTTGTGGATA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTACATGCCACCATGCCCTaGTTGATCACTCTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLHATMP*LITLLN
Trigger: GTTTAAAAGAGTGATCAAGCAGGGCATGGTGGCATG...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGGACTTAAGGGGAATTaGAACAAGAGGTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLGLKGN*NKRSEN
Trigger: GTTTTCTGACCTCTTGTTTCAATTCCCCTTAAGTCC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTATTGCACTTTGCTTCTaGAATCCTGAAACGTTTCAA +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILIALCF*NPETFQ
Trigger: TTGAAACGTTTCAGGATTTCAGAAGCAAAGTGCAAT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR GCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTTCAGGGAATTCTATTaGACAAAGGAAATAAAGGGC +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILFREFY*TKEIKG
Trigger: GCCCTTTATTTCCTTTGTGCAATAGAATTCCCTGAA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTAGCCCACAATGGGTATaGGTACATAATATACACATA +
Preference number: 2 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILSPQWV*VHNIHI
Trigger: TATGTGTATATTATGTACCCATACCCATTGTGGGCT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAAGCCTAAGAATCTGCTaGTGTCTCAGTTTCACATAC +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLSLRIC*CLSFTY
Trigger: GTATGTGAAACTGAGACACCAGCAGATTCTTAGGCT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCACAGTTTTCCTCTCTTTaGAGATTCAAGATCACTTCA +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSQFSSL*RFKITS
Trigger: TGAAGTGATCTTGAATCTTCAAAGAGAGGAAAACTG...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTACCGTCAATAGGTGATTaGTTCCATTCACACATCAAT +
Preference number: 2 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLPSIGD*FHSHIN
Trigger: ATTGATGTGTGAATGGAATCAATCACCTATTGACGG...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR TCA 90 bp AAATTCGTCTTTAATAATGTTCTTTGCCTACCCGAAAAATCTTGTGCATCCTCACATCCTCATGGTGGCTaGACAAAAGATAAATCTTGT +
Preference number: 2 (lower is better)
Translates to: KFVFNNVLCLPEKSCASSHPHGG*TKDKSC
Trigger: ACAAGATTTATCTTTTGTTCAGCCACCATGAGGATG...TGAGGATGCACAAGATTTTTCGGGTAGGCAAAGAACATTATTAAAGACGAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATCTAAAACAGCTAAGTaGGACCCAGATTTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSSKTAK*DPDFLE
Trigger: TTCAAGAAAATCTGGGTCCCACTTAGCTGTTTTAGA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAAAATTCAGCCCACAATaGGTATGGGTACATAATATA +
Preference number: 2 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSKFSPQ*VWVHNI
Trigger: TATATTATGTACCCATACCCATTGTGGGCTGAATTT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCTTGAGCCCAGGAGTTaGAGGCCAGCCTGCTCAACA +
Preference number: 3 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLLEPRS*RPACST
Trigger: TGTTGAGCAGGCTGGCCTCAAACTCCTGGGCTCAAG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGGAGGGACTCTGTTCTaGATTTTCAGTAGTCCATGG +
Preference number: 3 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLGGTLF*IFSSPW
Trigger: CCATGGACTACTGAAAATCAAGAACAGAGTCCCTCC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTCCAGAGACGAGGTCTaGCTTTGCCATCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSSRDEV*LCHPGW
Trigger: CCAGCCTGGATGGCAAAGCAAGACCTCGTCTCTGGA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp CTCTGCGCATGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTATGTTGAATAGCACTTaGGGAGGCCAAGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LCACLTIQRQIGRPLEDCMLNST*GGQGRQ
Trigger: CTGCCTGCCTTGGCCTCCCAAAGTGCTATTCAACAT...ACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494102.2
3UTR-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGTGGAAAATGAAAACTaGTTTCGACAACAGGGTTTT +
Preference number: 3 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLVENEN*FRQQGF
Trigger: AAAACCCTGTTGTCGAAACAAGTTTTCATTTTCCAC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp TGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATGTTTCCCGAAAAATCTaGTGCATCCTCATGGTGGCT +
Preference number: 3 (lower is better)
Translates to: CASGDEDSPLFHPLAVVDVSRKI*CILMVA
Trigger: AGCCACCATGAGGATGCACAAGATTTTTCGGGAAAC...ATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
3UTR TCA 72 bp GAGGCTACCTCGCTGAGATTGATCTTAAAACAACGGTaGAAGCCTCCAGCTTCTCTCAGGCATTCAAATGCT +
Preference number: 3 (lower is better)
Translates to: EATSLRLILKQR*KPPASLRHSNA
Trigger: AGCATTTGAATGCCTGAGAGAAGCTGGAGGCTTTCACCGTTGTTTTAAGATCAATCTCAGCGAGGTAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGCTGAGATCGCGCCATaGCATTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAATGCAATGGCGCGATCTCAGC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTGTGCTTTGAAAGGTTaGAGAGCACCACTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLCALKG*RAPLSK
Trigger: CTTAGAAAGTGGTGCTCTCAAACCTTTCAAAGCACA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp AAACAACGTTTCAGTTTTCATCCTCTAGTACTGAAGTaGCCTCAAGGTGGTAGGCACTGTATAGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: KQRFSFHPLVLK*PQGGRHCIAGE
Trigger: TTCTCCTGCTATACAGTGCCTACCACCTTGAGGGCACTTCAGTACTAGAGGATGAAAACTGAAACGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp GATATTCTTGACACTTTTCCCATAGGCCTCTGCGCATaGTTGACAATCCAGAGACAAATAGGAAGGCCATTA +
Preference number: 3 (lower is better)
Translates to: DILDTFPIGLCA*LTIQRQIGRPL
Trigger: TAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAAAGTGTCAAGAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCATCTCCAGGGACAGTTaGTGCAATTTGAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSISRDS*CNLKTK
Trigger: CTTTGTTTTCAAATTGCACAAACTGTCCCTGGAGAT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGAAGGCCATTAGAGGATaGTTCAAAAAGAGAGTGAAG +
Preference number: 3 (lower is better)
Translates to: GDEDSPLFHPLAVVDMILKAIRG*FKKRVK
Trigger: CTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTT...CAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR TCA 72 bp TCACTGGCAATGGCCAAATTAGCAGACCTTGGTACCTaGCTATATTTCCAGTCCAGAGTGTTCTCTGTATAT +
Preference number: 3 (lower is better)
Translates to: SLAMAKLADLGT*LYFQSRVFSVY
Trigger: ATATACAGAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCCATTGCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CCA 72 bp CATGTGCGAATATATCATCAACTTGCAGAACACAAGTaGTCTCATAGAGACACAGCAATACGAGTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: HVRIYHQLAEHK*SHRDTAIRVKA
Trigger: TGCCTTCACTCGTATTGCTGTGTCTCTATGAGACCACTTGTGTTCTGCAAGTTGATGATATATTCGCACATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAATTACAGAATCAGAGTaGGAGAAGACCTGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGITESE*EKTWAN
Trigger: GTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAAT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp TACTTGGCAACATTCTATAGGTTCACAAATTGGCATTaGACGTATTTACTATCCTCTTATCCTCCCCAACCC +
Preference number: 3 (lower is better)
Translates to: YLATFYRFTNWH*TYLLSSYPPQP
Trigger: GGGTTGGGGAGGATAAGAGGATAGTAAATACGTGCAATGCCAATTTGTGAACCTATAGAATGTTGCCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CCA 72 bp TTTTGGAACCAAGAGTCCAAATTACAGAATCAGAGTTaGAGAAGACCTGGGCCAACCTCTTCATTTTACAGA +
Preference number: 3 (lower is better)
Translates to: FWNQESKLQNQS*RRPGPTSSFYR
Trigger: TCTGTAAAATGAAGAGGTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAATTTGGACTCTTGGTTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CCA 72 bp CTTATTCACCCTCAAAGTTATTGGCTTTACAACGGTTaGGGTCAGAGGTCACATTCACAATGTCAAGTGTTT +
Preference number: 3 (lower is better)
Translates to: LIHPQSYWLYNG*GQRSHSQCQVF
Trigger: AAACACTTGACATTGTGAATGTGACCTCTGACCCCAACCGTTGTAAAGCCAATAACTTTGAGGGTGAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAATCAGCTCAAGCCCATaGGGCAACTGTCCTTTTAGA +
Preference number: 3 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSISSSP*GNCPFR
Trigger: TCTAAAAGGACAGTTGCCCAATGGGCTTGAGCTGAT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGCTGAGGTGAGAAGATaGCCTGAATCCAGGAATTTG +
Preference number: 3 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLAEVRR*PESRNL
Trigger: CAAATTCCTGGATTCAGGCAATCTTCTCACCTCAGC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCACCAGCCACAATTGGATaGCACTTTGCTTCTGAAATC +
Preference number: 3 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSPATIG*HFASEI
Trigger: GATTTCAGAAGCAAAGTGCAATCCAATTGTGGCTGG...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 72 bp TTTATCCAAACACAAGCCTCTCAAAATAGAGGCTTATaGATGAGATACAGCCACAACCTAATTACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: FIQTQASQNRGL*MRYSHNLITAA
Trigger: TGCTGCTGTAATTAGGTTGTGGCTGTATCTCATTCATAAGCCTCTATTTTGAGAGGCTTGTGTTTGGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 72 bp AACGTGAATGAGTCAGTAGCTGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTTGACACTTTTCCCATA +
Preference number: 3 (lower is better)
Translates to: NVNESVAGQYHG*FFEDILDTFPI
Trigger: TATGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATTGCCCAGCTACTGACTCATTCACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR TCA 72 bp ATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATaGTTCTGGATAATTTCGTGTTTCCCGAAAAATCTT +
Preference number: 3 (lower is better)
Translates to: ILHCFIPWQLWI*FWIISCFPKNL
Trigger: AAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
3UTR-3UTR CAA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTACAGTTTTCCTCTCTTaGAAGATTCAAGATCACTTC +
Preference number: 3 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILTVFLS*KIQDHF
Trigger: GAAGTGATCTTGAATCTTCAAAGAGAGGAAAACTGT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAACTATGAATAGCTTTTaGGGTCTCAGCTTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSTMNSF*GLSFLF
Trigger: GAAGAGAAAGCTGAGACCCAAAAAGCTATTCATAGT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTAATAAATTCTGTGCTTaGAAAGGTTTGAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILNKFCA*KGLRAP
Trigger: TGGTGCTCTCAAACCTTTCAAAGCACAGAATTTATT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCAAAAGAAATGCCTGATCTATaGAACGTGAATGAGTCAGTA +
Preference number: 3 (lower is better)
Translates to: AEQKINLVRSKRRNSSPKEMPDL*NVNESV
Trigger: TACTGACTCATTCACGTTCAATAGATCAGGCATTTC...TTTTGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR CCA 72 bp AAGAAAATAAAGGACTACTACAGCCTAAGAATCTGCTaGTGTCTCAGTTTCACATACTTAGGTTTTTCAGGT +
Preference number: 3 (lower is better)
Translates to: KKIKDYYSLRIC*CLSFTYLGFSG
Trigger: ACCTGAAAAACCTAAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTATTAAGTCTATTTTGTTaGCTTCCCCAATGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLLSLFC*LPQCPE
Trigger: TTCTGGGCATTGGGGAAGCAAACAAAATAGACTTAA...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGACAGTTTGTGCAATTaGAAAACAAAGGAGTGCTTT +
Preference number: 3 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSDSLCN*KTKECF
Trigger: AAAGCACTCCTTTGTTTTCAAATTGCACAAACTGTC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp GCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCAAAATGGGCAATATCACGGTaGATTTTTCGAAGATATTCT +
Preference number: 3 (lower is better)
Translates to: AEQKINLVRSKRRNSSPKWAISR*IFRRYS
Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...TTTTGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
3UTR-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAATACATAAATCCGATTaGTCGCTTTTCCCATTATCC +
Preference number: 3 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLIHKSD*SLFPLS
Trigger: GGATAATGGGAAAAGCGACAAATCGGATTTATGTAT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTATTATCCCTCTATGGTTaGGAAGTATTTACTTTTGGG +
Preference number: 3 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLLSLYG*EVFTFG
Trigger: CCCAAAAGTAAATACTTCCAAACCATAGAGGGATAA...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp TTGAAACAAGAGGTCAGAAAACCGAAGATAGTCTATTaGTGTAGTTCAATGAACACTGTTACTAAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: LKQEVRKPKIVY*CSSMNTVTKGK
Trigger: CTTTCCTTTAGTAACAGTGTTCATTGAACTACAGCAATAGACTATCTTCGGTTTTCTGACCTCTTGTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp ATCAAGAAAATAAAGGACTACTACAGCCTAAGAATCTaGTGGTGTCTCAGTTTCACATACTTAGGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: IKKIKDYYSLRI*WCLSFTYLGFS
Trigger: TGAAAAACCTAAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATTTTCTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR GCA 72 bp GGAGAACTAGCCATATGGTCTATGTGGCAAAAGGAATaGATTCAGATAACTATAAAAAGCCACATAAATCAA +
Preference number: 3 (lower is better)
Translates to: GELAIWSMWQKE*IQITIKSHINQ
Trigger: TTGATTTATGTGGCTTTTTATAGTTATCTGAATGCATTCCTTTTGCCACATAGACCATATGGCTAGTTCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 72 bp GAAAACTCCAGCCACAATTGGATTGCACTTTGCTTCTaGAATCCTGAAACGTTTCAATTTGGTAAAAATAAA +
Preference number: 3 (lower is better)
Translates to: ENSSHNWIALCF*NPETFQFGKNK
Trigger: TTTATTTTTACCAAATTGAAACGTTTCAGGATTTCAGAAGCAAAGTGCAATCCAATTGTGGCTGGAGTTTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR TCA 72 bp AAGAGAACGTATGGCTTAAGCAATTTAGAACACAACTaGCAAGACTTTTACAATACCACAAATGTTCAAGTC +
Preference number: 3 (lower is better)
Translates to: KRTYGLSNLEHN*QDFYNTTNVQV
Trigger: GACTTGAACATTTGTGGTATTGTAAAAGTCTTGTCAGTTGTGTTCTAAATTGCTTAAGCCATACGTTCTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTCACCCAGACTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSPRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGTCTGGGTGA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAGCAGTCTGAGCTACTaGGAAGACTGGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSSLSY*EDWAEM
Trigger: CATCTCAGCCCAGTCTTCTCAGTAGCTCAGACTGCT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGTGGGGAGGTGGTTTTaGATCACTGGCAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLVGRWF*ITGNGQ
Trigger: TTGGCCATTGCCAGTGATTCAAAACCACCTCCCCAC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTCCAAGACTTGTCGATaGTGCTGCTGGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSKTCR*CCWNFQ
Trigger: CTGGAAGTTCCAGCAGCAGCATCGACAAGTCTTGGA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAAAGCTGCTACTTCTTaGAGCACCAAGTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLKAATS*STKFHS
Trigger: GGAATGGAACTTGGTGCTTCAAGAAGTAGCAGCTTT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAGGTATATAGCTGGCTaGAGGTTGGTTTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLRYIAG*RLVCRA
Trigger: TGCTCTACAAACCAACCTTCAGCCAGCTATATACCT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCGAGGTTGCAGTGAGCTaGGATCCTGCCACCACACTG +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLEVAVS*DPATTL
Trigger: CAGTGTGGTGGCAGGATCTCAGCTCACTGCAACCTC...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCACCCTCAAAGTTATTaGCTTTACAACGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLHPQSY*LYNGWG
Trigger: ACCCCAACCGTTGTAAAGCCAATAACTTTGAGGGTG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGCTCGCTCGGGAAGCTaGGGCGGCGGAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLARSGS*GGGGWS
Trigger: ACTCCAGCCTCCGCCGCCTCAGCTTCCCGAGCGAGC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGGACTTAAGGGGAATTaGAACAAGAGGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLGLKGN*NKRSEN
Trigger: GTTTTCTGACCTCTTGTTTCAATTCCCCTTAAGTCC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTATCCACAAGGAGCCTaGGTCAGTTCCATGAATTTT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLYPQGA*VSSMNF
Trigger: AAAATTCATGGAACTGACTCAGGCTCCTTGTGGATA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCTACTGAATCCGCTCTaGAGAATCACAGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLLLNPL*RITVFT
Trigger: AGTAAACACTGTGATTCTGCAGAGCGGATTCAGTAG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCACTGTGCCAGTCAGTCTaGGGGCCAGGCGACTCCGCG +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSLCQSV*GPGDSA
Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGACTGGCACAG...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp TTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTCTGTGCCAGTCAGTCTaGGGGCCAGGCGACTCCGCG +
Preference number: 4 (lower is better)
Translates to: LAVVDMILDNFVFPEKSCLCQSV*GPGDSA
Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGACTGGCACAG...ACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCACAATGATGAACAGTaGCTTCCTGGTGAAAGGATA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLHNDEQ*LPGERI
Trigger: TATCCTTTCACCAGGAAGCCACTGTTCATCATTGTG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp ATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGGGCAGGCAGATCTCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ILCILMVAEQKINLVRSKGRQIS*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGAGATCTGCCTGCC...CTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494102.2
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAGTTCTCTTGGTGGTTaGAGTGGGGAAATCAATATT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSSLGG*SGEINI
Trigger: AATATTGATTTCCCCACTCCAACCACCAAGAGAACT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAACTCAACCTTCCAATaGAAACTGCTCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLNSTFQ*KLLRGN
Trigger: ATTTCCTCTGAGCAGTTTCCATTGGAAGGTTGAGTT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTTTCTACTGTACTTTTaGTTACCACTACTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLFLLYF*LPLLSS
Trigger: TGAGGACAGTAGTGGTAATCAAAAGTACAGTAGAAA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTTTCCCATAGGCCTCTaGGCATGCTTGACAATCCAG +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLFPIGL*ACLTIQ
Trigger: CTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCCACTATTTATACTGGTaGTACACAACGAAGATAACC +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLHYLYW*YTTKIT
Trigger: GGTTATCTTCGTTGTGTAGCACCAGTATAAATAGTG...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTGTCGATGCTGCTGCTaGAACTTCCAGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSCRCCC*NFQSLV
Trigger: CACCAAACTCTGGAAGTTCCAGCAGCAGCATCGACA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGTCGATGCTGCTGCTaGAACTTCCAGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QNVLLEMRILHCFIPWQLCRCCC*NFQSLV
Trigger: CACCAAACTCTGGAAGTTCCAGCAGCAGCATCGACA...CAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCATTTTCAGTAGTCCATaGTGGCTAGCTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLIFSSP*WLASSL
Trigger: TAATGATGAAGCTAGCCACCATGGACTACTGAAAAT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCCAACCCTATCATCCTTaGGAGAGGTTTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLQPYHP*ERFEGP
Trigger: TGGGCCTTCAAACCTCTCCCAAGGATGATAGGGTTG...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGAGCAGACAGGACTTCTaGCTGGGAAGTAGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: ASGDEDSPLFHPLAVVDMSRQDF*LGSSSK
Trigger: TTTACTGCTACTTCCCAGCCAGAAGTCCTGTCTGCT...CATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAACCCATTGAACAGTTaGTTAGATTTATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLNPLNS*LDLSRR
Trigger: TCTTCTGGATAAATCTAAGCAACTGTTCAATGGGTT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCACTTGTCGATGCTGCTaGTGGAACTTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSTCRCC*WNFQSL
Trigger: CAAACTCTGGAAGTTCCAGCAGCAGCATCGACAAGT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATGCAATTTCTCCTATTTaGCAGCGCTTCAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: CASGDEDSPLFHPLAVVDAISPI*QRFKPY
Trigger: GTATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGC...ATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTTCACAAATTGGCATTaGACGTATTTACTATCCTCT +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLFTNWH*TYLLSS
Trigger: AGAGGATAGTAAATACGTGCAATGCCAATTTGTGAA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTATCAGAACGACCTGTaGGGAAAACGCCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PLAVVDMILDNFVFPEKSYQNDL*GKRQWP
Trigger: CGGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATA...AGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTTACAGAATCAGAGTTaGAGAAGACCTGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSLQNQS*RRPGPT
Trigger: GGTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCAAATTCAGCCCACAATaGGTATGGGTACATAATATA +
Preference number: 4 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLKFSPQ*VWVHNI
Trigger: TATATTATGTACCCATACCCATTGTGGGCTGAATTT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 72 bp CTTATCCTCCCCAACCCTATCATCCTTGGGAGAGGTTaGAAGGCCCAGATTTTTATAGCACACCATGCATCT +
Preference number: 4 (lower is better)
Translates to: LILPNPIILGRG*KAQIFIAHHAS
Trigger: AGATGCATGGTGTGCTATAAAAATCTGGGCCTTCAAACCTCTCCCAAGGATGATAGGGTTGGGGAGGATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCATTTCCTTGTGGGACTaGTTTCGTTTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSISLWD*FRLWMA
Trigger: TGCCATCCACAAACGAAATCAGTCCCACAAGGAAAT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TGCGCATGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCACAGGCATTCAAATGCTaGCCATCACTTCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CACLTIQRQIGRPLEDCSQAFKC*PSLPVS
Trigger: TGACACAGGAAGTGATGGTCAGCATTTGAATGCCTG...TGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR GCA 90 bp TGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAACTTGTCGATGCTGCTaGTGGAACTTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: CILMVAEQKINLVRSKRRTCRCC*WNFQSL
Trigger: CAAACTCTGGAAGTTCCAGCAGCAGCATCGACAAGT...TCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp CTAATTCCAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGTCCAAGACTTGTCGATaGTGCTGCTGGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LIPKCASGDEDSPLFHPLSKTCR*CCWNFQ
Trigger: CTGGAAGTTCCAGCAGCAGCATCGACAAGTCTTGGA...CAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTGGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCGCAATTTCTCCTATTTaGCAGCGCTTCAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLAISPI*QRFKPY
Trigger: GTATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGC...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp CCAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTCGCCTCAATGAAAGCTaGTACTTCTTGAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: PKCASGDEDSPLFHPLAVRLNES*YFLKHQ
Trigger: TTGGTGCTTCAAGAAGTAGCAGCTTTCATTGAGGCG...AACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCACTGTCCCACAATCATaGCCTGTTCCAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: DSPLFHPLAVVDMILDNFTVPQS*PVPAMG
Trigger: CCCCATTGCTGGAACAGGGCATGATTGTGGGACAGT...GAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTCCCGAAAAATCTTGTaGATCCTCATGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLSRKIL*ILMVAE
Trigger: TTCAGCCACCATGAGGATGCACAAGATTTTTCGGGA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp CAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTCCCGAAAAATCTTGTaGATCCTCATGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QNVLLEMRILHCFIPWQLSRKIL*ILMVAE
Trigger: TTCAGCCACCATGAGGATGCACAAGATTTTTCGGGA...CAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR CCA 90 bp TCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTTTTCCTCTCTCCCTGTaGGATATCATCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGDEDSPLFHPLAVVDMIFPLSL*DIIFST
Trigger: GGTGCTGAAGATGATATCCCACAGGGAGAGAGGAAA...AATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTGCCCTGTTCCAGCAATaGGGCTCCTGTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILALFQQ*GSCFSK
Trigger: CTTGCTGAAACAGGAGCCCCATTGCTGGAACAGGGC...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTGCAGCCCTGTTCCAGCAATaGGGCTCCTGTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AVVDMILDNFVFPEKSCAALFQQ*GSCFSK
Trigger: CTTGCTGAAACAGGAGCCCCATTGCTGGAACAGGGC...TGCACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGATATCAGAACGACCTGTaGGGAAAACGCCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGYQNDL*GKRQWP
Trigger: CGGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATA...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTCAGCTCAAGCCCATTaGGCAACTGTCCTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLSAQAH*ATVLLD
Trigger: ATCTAAAAGGACAGTTGCCCAATGGGCTTGAGCTGA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCTTGCAGAACACAAGTaGTCTCATAGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSLAEHK*SHRDTA
Trigger: TGCTGTGTCTCTATGAGACCACTTGTGTTCTGCAAG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAAAGCTGCTACTTCTTaGAGCACCAAGTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: CILMVAEQKINLVRSKRRKAATS*STKFHS
Trigger: GGAATGGAACTTGGTGCTTCAAGAAGTAGCAGCTTT...TCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp TGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATTGGCAGTTGTGGATATaGTTCTGGATAATTTCGTGT +
Preference number: 4 (lower is better)
Translates to: CASGDEDSPLFHPLAVVDWQLWI*FWIISC
Trigger: ACACGAAATTATCCAGAATCATATCCACAACTGCCA...ATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATTGAGCCCAGGAGTTTaGGGCCAGCCTGCTCAACAA +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSLSPGV*GQPAQQ
Trigger: TTGTTGAGCAGGCTGGCCTCAAACTCCTGGGCTCAA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCTAATTACAGCAGCATaGACAATGCCACTAGGATGT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSLITAA*TMPLGC
Trigger: ACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCACACAGCAATACGAGTaGAGGCATTTTATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSTQQYE*RHFIQW
Trigger: CCACTGAATAAAATGCCTTCACTCGTATTGCTGTGT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCTTCCCGTCAATAGGTaGTTGATTCCATTCACACAT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSLPVNR*LIPFTH
Trigger: ATGTGTGAATGGAATCAATCACCTATTGACGGGAAG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGATAGGCCTCTGCGCATaGTTGACAATCCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: SPLFHPLAVVDMILDNFVIGLCA*LTIQRQ
Trigger: TTGTCTCTGGATTGTCAAGCATGCGCAGAGGCCTAT...CACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR GCA 90 bp GTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCATTTCCCATAGGCCTCTaGGCATGCTTGACAATCCAG +
Preference number: 4 (lower is better)
Translates to: VAEQKINLVRSKRRNSSPFPIGL*ACLTIQ
Trigger: CTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAA...TGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR GCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGACCTCTAGTACTGAAGTaGCCTCAAGGTGGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGPLVLK*PQGGRH
Trigger: GTGCCTACCACCTTGAGGGCACTTCAGTACTAGAGG...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGCAGCCACAAACTCCTaGGCTCAAGTGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLAATNS*AQVTLP
Trigger: TGGGAGGGTCACTTGAGCCCAGGAGTTTGTGGCTGC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCGCCATATGGTCTATGTaGCAAAAGGAATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLAIWSM*QKECIQ
Trigger: CTGAATGCATTCCTTTTGCCACATAGACCATATGGC...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCGGAGAACTAGCCATATaGTCTATGTGGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSGELAI*SMWQKE
Trigger: TTCCTTTTGCCACATAGACCATATGGCTAGTTCTCC...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCAGTAGGCTTGTCAGCTaGTTCCTGCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DSPLFHPLAVVDMILDNFSRLVS*FLHSWF
Trigger: AAACCAGGAATGCAGGAATCAGCTGACAAGCCTACT...GAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTTTCGAAGATATTCTTaGCACTTTTCCCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSFRRYS*HFSHRP
Trigger: AGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCATCCTCATGGTGGCTaGACAAAAGATAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSHPHGG*TKDKSC
Trigger: ACAAGATTTATCTTTTGTTCAGCCACCATGAGGATG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTGGCAGTTGTGGATATaGTTCTGGATAATTTCGTGT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSWQLWI*FWIISC
Trigger: ACACGAAATTATCCAGAATCATATCCACAACTGCCA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAACTGTCCCACAATCATaGCCTGTTCCAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSTVPQS*PVPAMG
Trigger: CCCCATTGCTGGAACAGGGCATGATTGTGGGACAGT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGATAGGCCTCTGCGCATaGTTGACAATCCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: RKILCILMVAEQKINLVRIGLCA*LTIQRQ
Trigger: TTGTCTCTGGATTGTCAAGCATGCGCAGAGGCCTAT...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR GCA 90 bp TGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGATTTCCCATAGGCCTCTaGGCATGCTTGACAATCCAG +
Preference number: 4 (lower is better)
Translates to: CLTIQRQIGRPLEDCSKRFPIGL*ACLTIQ
Trigger: CTGGATTGTCAAGCATGCGCAGAGGCCTATGGGAAA...TCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR CCA 90 bp GCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATAGCTGCCCAATCTTaGAAGCAATTTCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: ASGDEDSPLFHPLAVVDMIAAQS*KQFLLF
Trigger: AAATAGGAGAAATTGCTTCCAAGATTGGGCAGCTAT...CATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTGGGGAAAACGCCAGTaGCCGACAGGTAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILWGKRQ*PTGKSE
Trigger: TTCTGATTTACCTGTCGGCCACTGGCGTTTTCCCCA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTGCATGGGGAAAACGCCAGTaGCCGACAGGTAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: AVVDMILDNFVFPEKSCAWGKRQ*PTGKSE
Trigger: TTCTGATTTACCTGTCGGCCACTGGCGTTTTCCCCA...TGCACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAAGAAATACAGAAGCTaGGTAAGGTACAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSKKYRS*VRYKED
Trigger: ATCCTCCTTGTACCTTACCCAGCTTCTGTATTTCTT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGGACAGGACTTCTGGCTaGGAAGTAGCAGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: RKILCILMVAEQKINLVRDRTSG*EVAVKC
Trigger: GCATTTTACTGCTACTTCCCAGCCAGAAGTCCTGTC...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467917.5
3UTR CAA 72 bp CCTTATTCACCCTCAAAGTTATTGGCTTTACAACGGTaGGGGTCAGAGGTCACATTCACAATGTCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PYSPSKLLALQR*GSEVTFTMSSV
Trigger: AACACTTGACATTGTGAATGTGACCTCTGACCCCAACCGTTGTAAAGCCAATAACTTTGAGGGTGAATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTCAGGATCCGCCTCAATaGAAGCTGCTACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILQDPPQ*KLLLLE
Trigger: TTCAAGAAGTAGCAGCTTTCATTGAGGCGGATCCTG...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAAGTAGGCTTGTCAGCTaGTTCCTGCATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGSRLVS*FLHSWF
Trigger: AAACCAGGAATGCAGGAATCAGCTGACAAGCCTACT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGATTTCCTTGTGGGACTaGTTTCGTTTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: RKILCILMVAEQKINLVRISLWD*FRLWMA
Trigger: TGCCATCCACAAACGAAATCAGTCCCACAAGGAAAT...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp CTCTGCGCATGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTGTCCAAACAAGTTTGTaGAATTCTTATACGCAACAC +
Preference number: 4 (lower is better)
Translates to: LCACLTIQRQIGRPLEDCVQTSL*NSYTQH
Trigger: GTGTTGCGTATAAGAATTTCACAAACTTGTTTGGAC...ACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGCGCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR TCA 90 bp CAAAATGTGCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT +
Preference number: 4 (lower is better)
Translates to: QNVLLEMRILHCFIPWQLGQYHG*FFEDIL
Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...CAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGCACATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR TCA 90 bp GGAGAAATGCCTGATCTATTGAACGTGAATGAGTCAGTAGCTGGGCAATATCACTGGCAGTTGTGGATATaGTTCTGGATAATTTCGTGT +
Preference number: 4 (lower is better)
Translates to: GEMPDLLNVNESVAGQYHWQLWI*FWIISC
Trigger: ACACGAAATTATCCAGAATCATATCCACAACTGCCA...GTGATATTGCCCAGCTACTGACTCATTCACGTTCAATAGATCAGGCATTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR TCA 90 bp GACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGATGTGCTTCTGGAGATaGGGATTCTCCACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DNPETNRKAIRGLFKKRVMCFWR*GFSTVS
Trigger: TGAAACAGTGGAGAATCCTCATCTCCAGAAGCACAT...CACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAAATTTGAGGCTGCAGTaGGCCATGAATGTACCGCTG +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSNLRLQ*AMNVPL
Trigger: CAGCGGTACATTCATGGCTCACTGCAGCCTCAAATT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAGGTGAGAAGATTGCCTaGATCCAGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGGEKIA*IQEFEA
Trigger: AGCCTCAAATTCCTGGATTCAGGCAATCTTCTCACC...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAGCAGACCTTGGTACCTaGCTATATTTCCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGADLGT*LYFQSR
Trigger: TCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGC...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTCATTGGAAAGCCTACTaGATCCGCTCTGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILHWKAY*IRSAES
Trigger: TGATTCTGCAGAGCGGATTCAGTAGGCTTTCCAATG...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTAAGACTTGTCGATGCTaGTGCTGGAACTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILKTCRC*CWNFQS
Trigger: ACTCTGGAAGTTCCAGCAGCAGCATCGACAAGTCTT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCAGCTGGTTTCCGATGTaGGTAAGTAATAATGATAGT +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLSWFPM*VSNNDS
Trigger: ACTATCATTATTACTTACGCACATCGGAAACCAGCT...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAAGGCAAAGTGTTCATaGAAATGTGACCTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSKAKCS*KCDLPN
Trigger: ATTAGGAAGGTCACATTTGCATGAACACTTTGCCTT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCGGAACTTCCAGAGTTTaGTGTAAACATCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSGTSRV*CKHQKF
Trigger: GAACTTTTGATGTTTACACCAAACTCTGGAAGTTCC...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTCCTCATTCAGATAGCTaGTTTCCGATGTGCGTAAGT +
Preference number: 4 (lower is better)
Translates to: PLAVVDMILDNFVFPEKSPHSDS*FPMCVS
Trigger: ACTTACGCACATCGGAAACCAGCTATCTGAATGAGG...AGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTCTAAAACAGCTAAGTaGGACCCAGATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLSKTAK*DPDFLE
Trigger: TTCAAGAAAATCTGGGTCCCACTTAGCTGTTTTAGA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAGCCCACAATGGGTATaGGTACATAATATACACATA +
Preference number: 4 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSSPQWV*VHNIHI
Trigger: TATGTGTATATTATGTACCCATACCCATTGTGGGCT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTTAATCATGGCAAAGTaGACATTCACAACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLLIMAK*TFTTAS
Trigger: TGAAGCTGTTGTGAATGTCCACTTTGCCATGATTAA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 72 bp TTTTTGGAACCAAGAGTCCAAATTACAGAATCAGAGTaGGAGAAGACCTGGGCCAACCTCTTCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: FLEPRVQITESE*EKTWANLFILQ
Trigger: CTGTAAAATGAAGAGGTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAATTTGGACTCTTGGTTCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 72 bp GGATCCTCTATCAGGAAAACTCCAGCCACAATTGGATaGCACTTTGCTTCTGAAATCCTGAAACGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GSSIRKTPATIG*HFASEILKRFN
Trigger: ATTGAAACGTTTCAGGATTTCAGAAGCAAAGTGCAATCCAATTGTGGCTGGAGTTTTCCTGATAGAGGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAAGTTCCATTCCACTTaGTCTTCAGTATTAAATCGG +
Preference number: 4 (lower is better)
Translates to: CILMVAEQKINLVRSKRRKFHST*SSVLNR
Trigger: CCGATTTAATACTGAAGATCAAGTGGAATGGAACTT...TCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp ATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTAGGTATATAGCTGGCTaGAGGTTGGTTTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: MVAEQKINLVRSKRRNSSRYIAG*RLVCRA
Trigger: TGCTCTACAAACCAACCTTCAGCCAGCTATATACCT...AGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp GAGATTGATCTTAAAACAACGGTGAAAGCCTCCAGCTTCTCTCAGGCATTCAAATTTCGAAGATATTCTTaGCACTTTTCCCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: EIDLKTTVKASSFSQAFKFRRYS*HFSHRP
Trigger: AGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAA...TTTGAATGCCTGAGAGAAGCTGGAGGCTTTCACCGTTGTTTTAAGATCAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR TCA 90 bp CTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCTTTCGAAGATATTCTTaGCACTTTTCCCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFHPLAVVDMILDNFVFPFRRYS*HFSHRP
Trigger: AGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAA...GGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR TCA 90 bp GATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCTCTATTGAACGTGAATaGGTCAGTAGCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: DSPLFHPLAVVDMILDNFSIERE*VSSWAI
Trigger: TATTGCCCAGCTACTGACTCATTCACGTTCAATAGA...GAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR TCA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGTCTATTGAACGTGAATaGGTCAGTAGCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: RKILCILMVAEQKINLVRSIERE*VSSWAI
Trigger: TATTGCCCAGCTACTGACTCATTCACGTTCAATAGA...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR TCA 90 bp GACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGTCTATTGAACGTGAATaGGTCAGTAGCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: DNPETNRKAIRGLFKKRVSIERE*VSSWAI
Trigger: TATTGCCCAGCTACTGACTCATTCACGTTCAATAGA...CACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAATGTGCTTCTGGAGATaGGGATTCTCCACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGMCFWR*GFSTVS
Trigger: TGAAACAGTGGAGAATCCTCATCTCCAGAAGCACAT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp CAAAGAACACGTTTCGAACATCCAGAATGGATGCTAATTCCAAAATGTGCTTCTATGTGCTTCTGGAGATaGGGATTCTCCACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QRTRFEHPEWMLIPKCASMCFWR*GFSTVS
Trigger: TGAAACAGTGGAGAATCCTCATCTCCAGAAGCACAT...AGAAGCACATTTTGGAATTAGCATCCATTCTGGATGTTCGAAACGTGTTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGAACCCATTGAACAGTTaGTTAGATTTATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GDEDSPLFHPLAVVDMILNPLNS*LDLSRR
Trigger: TCTTCTGGATAAATCTAAGCAACTGTTCAATGGGTT...CAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCAAGCAATTAGTAGCATaGTTCTTTAAGGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLKQLVA*FFKGGN
Trigger: ATTTCCACCCTTAAAGAAGCATGCTACTAATTGCTT...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAAGGGTTTCACTGTATTaGCCAGACTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSRVSLY*PDWSPT
Trigger: AGTTGGAGACCAGTCTGGGCAATACAGTGAAACCCT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp ATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTACCCGAAAAATCTTGTaGATCCTCATGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MVAEQKINLVRSKRRNSSTRKIL*ILMVAE
Trigger: TTCAGCCACCATGAGGATGCACAAGATTTTTCGGGT...AGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494102.2
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATTTCCTCTCTCCCTGTaGGATATCATCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSFPLSL*DIIFST
Trigger: GGTGCTGAAGATGATATCCCACAGGGAGAGAGGAAA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp GACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGCACAATGATGAACAGTaGCTTCCTGGTGAAAGGATA +
Preference number: 4 (lower is better)
Translates to: DNPETNRKAIRGLFKKRVHNDEQ*LPGERI
Trigger: TATCCTTTCACCAGGAAGCCACTGTTCATCATTGTG...CACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATGGCTTTACAACGGTTaGGGTCAGAGGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSWLYNG*GQRSHS
Trigger: TGAATGTGACCTCTGACCCCAACCGTTGTAAAGCCA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TTTAATAGTCATCAATGGTATTCTCAAAGAACACGTTTCGAACATCCAGAATGGCAGGATCCGCCTCAATaGAAGCTGCTACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FNSHQWYSQRTRFEHPEWQDPPQ*KLLLLE
Trigger: TTCAAGAAGTAGCAGCTTTCATTGAGGCGGATCCTG...CCATTCTGGATGTTCGAAACGTGTTCTTTGAGAATACCATTGATGACTATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp GACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGTTTCGAAGATATTCTTaGCACTTTTCCCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: DNPETNRKAIRGLFKKRVFRRYS*HFSHRP
Trigger: AGGCCTATGGGAAAAGTGTCAAGAATATCTTCGAAA...CACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTCTATTGAACGTGAATaGGTCAGTAGCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILSIERE*VSSWAI
Trigger: TATTGCCCAGCTACTGACTCATTCACGTTCAATAGA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCCATCCTCATGGTGGCTaGACAAAAGATAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: DSPLFHPLAVVDMILDNFHPHGG*TKDKSC
Trigger: ACAAGATTTATCTTTTGTTCAGCCACCATGAGGATG...GAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR TCA 90 bp AAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCCATCCTCATGGTGGCTaGACAAAAGATAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: KILCILMVAEQKINLVRSHPHGG*TKDKSC
Trigger: ACAAGATTTATCTTTTGTTCAGCCACCATGAGGATG...GCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR TCA 90 bp GTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCACATCCTCATGGTGGCTaGACAAAAGATAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: VAEQKINLVRSKRRNSSPHPHGG*TKDKSC
Trigger: ACAAGATTTATCTTTTGTTCAGCCACCATGAGGATG...TGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR TCA 90 bp GCATGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAATCTGATAATAAATGTTaGATAGCACTTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACLTIQRQIGRPLEDCSKSDNKC*IALWEA
Trigger: GGCCTCCCAAAGTGCTATTCAACATTTATTATCAGA...TTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494102.2
CDS-3UTR GCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAATAGGCCTCTGCGCATaGTTGACAATCCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLIGLCA*LTIQRQ
Trigger: TTGTCTCTGGATTGTCAAGCATGCGCAGAGGCCTAT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CAAAGAACACGTTTCGAACATCCAGAATGGATGCTAATTCCAAAATGTGCTTCTCACAATGATGAACAGTaGCTTCCTGGTGAAAGGATA +
Preference number: 4 (lower is better)
Translates to: QRTRFEHPEWMLIPKCASHNDEQ*LPGERI
Trigger: TATCCTTTCACCAGGAAGCCACTGTTCATCATTGTG...AGAAGCACATTTTGGAATTAGCATCCATTCTGGATGTTCGAAACGTGTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp GATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGATTCTGGATAATTTCGACTTGAGAATAATATaGTCTCTGTCTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: DSPLFHPLAVVDMILDNFDLRII*SLSDCR
Trigger: TCTGCAATCAGACAGAGATCATATTATTCTCAAGTC...GAAATTATCCAGAATCATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT +
Preference number: 4 (lower is better)
Translates to: RKILCILMVAEQKINLVRGQYHG*FFEDIL
Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTCTAGCTCTATCACTATaGATAGCTTTTTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILLALSL*IAFWVS
Trigger: TGAGACCCAAAAAGCTATTCATAGTGATAGAGCTAG...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGACAAAATAGAGGCTTATaGATGAGATACAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGQNRGL*MRYSHN
Trigger: GTTGTGGCTGTATCTCATTCATAAGCCTCTATTTTG...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGAGCCTACTCACCTTTaGTATGCAAGTCCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLEPTHL*YASPVR
Trigger: TCTTACTGGACTTGCATATCAAAGGTGAGTAGGCTC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAAAGCATTTTCTCAGATaGGCCTACTCACCTTTGATA +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGKHFLR*AYSPLI
Trigger: TATCAAAGGTGAGTAGGCTCATCTGAGAAAATGCTT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGACCGTCAATAGGTGATTaGTTCCATTCACACATCAAT +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGPSIGD*FHSHIN
Trigger: ATTGATGTGTGAATGGAATCAATCACCTATTGACGG...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTACGCCTCAATGAAAGCTaGTACTTCTTGAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLRLNES*YFLKHQ
Trigger: TTGGTGCTTCAAGAAGTAGCAGCTTTCATTGAGGCG...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTTTGTCAGCTGATTCCTaGATTCCTGGTTTATTCATC +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILLSADS*IPGLFI
Trigger: GATGAATAAACCAGGAATGCAGGAATCAGCTGACAA...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TCAAAGAACACGTTTCGAACATCCAGAATGGATGCTAATTCCAAAATGTGCTTCTTGTCAGCTGATTCCTaGATTCCTGGTTTATTCATC +
Preference number: 4 (lower is better)
Translates to: SKNTFRTSRMDANSKMCFLSADS*IPGLFI
Trigger: GATGAATAAACCAGGAATGCAGGAATCAGCTGACAA...GAAGCACATTTTGGAATTAGCATCCATTCTGGATGTTCGAAACGTGTTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR GCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATACAGCCTAAGAATCTaGTGGTGTCTCAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSYSLRI*WCLSFT
Trigger: TGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTACCTCATTCAGATAGCTaGTTTCCGATGTGCGTAAGT +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLPHSDS*FPMCVS
Trigger: ACTTACGCACATCGGAAACCAGCTATCTGAATGAGG...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTATTTACCTAGGGCCATaGGAAAGAGATATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILIYLGP*ERDIKS
Trigger: GCTTTTGATATCTCTTTCCCATGGCCCTAGGTAAAT...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGGQYHG*FFEDIL
Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AATAAAGGACTACTACAGCCTAAGAATCTGCTGGTGTCTCAGTTTCACATACTTCAGTTTTCCTCTCTTTaGAGATTCAAGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: NKGLLQPKNLLVSQFHILQFSSL*RFKITS
Trigger: TGAAGTGATCTTGAATCTTCAAAGAGAGGAAAACTG...AAGTATGTGAAACTGAGACACCAGCAGATTCTTAGGCTGTAGTAGTCCTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAATTGCACTTTGCTTCTaGAATCCTGAAACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGIALCF*NPETFQ
Trigger: TTGAAACGTTTCAGGATTTCAGAAGCAAAGTGCAAT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAAAATGGTATAATATCTaGTCTACTACTCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGKWYNI*STTLQC
Trigger: GCACTGGAGAGTAGTAGAGCAGATATTATACCATTT...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
3UTR CAA 72 bp CATTGGGCAACTGTCCTTTTAGATAATTCTTCTCCCTaGATTAAAGAAATACAGAAGCTGGGTAAGGTACAA +
Preference number: 4 (lower is better)
Translates to: HWATVLLDNSSP*IKEIQKLGKVQ
Trigger: TTGTACCTTACCCAGCTTCTGTATTTCTTTAATCAAGGGAGAAGAATTATCTAAAAGGACAGTTGCCCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGACTTGAGAATAATATaGTCTCTGTCTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSDLRII*SLSDCR
Trigger: TCTGCAATCAGACAGAGATCATATTATTCTCAAGTC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAAAGTTCCATTCCACTTaGTCTTCAGTATTAAATCGG +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSKFHST*SSVLNR
Trigger: CCGATTTAATACTGAAGATCAAGTGGAATGGAACTT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp GCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCAAAAGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT +
Preference number: 4 (lower is better)
Translates to: AEQKINLVRSKRRNSSPKGQYHG*FFEDIL
Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...TTTTGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAATAGCTGCCCAATCTTaGAAGCAATTTCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSIAAQS*KQFLLF
Trigger: AAATAGGAGAAATTGCTTCCAAGATTGGGCAGCTAT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGTCCAAACAAGTTTGTaGAATTCTTATACGCAACAC +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLVQTSL*NSYTQH
Trigger: GTGTTGCGTATAAGAATTTCACAAACTTGTTTGGAC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR TCA 90 bp TTAATAGTCATCAATGGTATTCTCAAAGAACACGTTTCGAACATCCAGAATGGAGTCCAAACAAGTTTGTaGAATTCTTATACGCAACAC +
Preference number: 4 (lower is better)
Translates to: LIVINGILKEHVSNIQNGVQTSL*NSYTQH
Trigger: GTGTTGCGTATAAGAATTTCACAAACTTGTTTGGAC...TCCATTCTGGATGTTCGAAACGTGTTCTTTGAGAATACCATTGATGACTATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR TCA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTATGTTTTGTGTATAACTaGCTTCTTGCAGTCTTATGC +
Preference number: 4 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLCFVYN*LLAVLC
Trigger: GCATAAGACTGCAAGAAGTCAGTTATACACAAAACA...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR GCA 90 bp TTAATAGTCATCAATGGTATTCTCAAAGAACACGTTTCGAACATCCAGAATGGAAGCTGGTTTCCGATGTaGGTAAGTAATAATGATAGT +
Preference number: 4 (lower is better)
Translates to: LIVINGILKEHVSNIQNGSWFPM*VSNNDS
Trigger: ACTATCATTATTACTTACGCACATCGGAAACCAGCT...TCCATTCTGGATGTTCGAAACGTGTTCTTTGAGAATACCATTGATGACTATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGTGGTTATCCCTCTATaGTTTGGAAGTATTTACTTT +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSVVIPL*FGSIYF
Trigger: AAAGTAAATACTTCCAAACCATAGAGGGATAACCAC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CCA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATGTTTCTACCTCAACTaGAAGAATCATCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSCFYLN*KNHPKS
Trigger: AGATTTTGGATGATTCTTCCAGTTGAGGTAGAAACA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTCCAGAGACGAGGTCTaGCTTTGCCATCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSRDEV*LCHPGW
Trigger: CCAGCCTGGATGGCAAAGCAAGACCTCGTCTCTGGA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS CCA 90 bp CATAAGGACCTTCACTATCAGAACGACCTGTGGGGAAAACGCCAGTaGCCGACAGGTAAATCAGAAGCACGCTATTGGCAGGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: HKDLHYQNDLWGKRQ*PTGKSEARYWQAAP
Trigger: AGGAGCTGCCTGCCAATAGCGTGCTTCTGATTTACCTGTCGGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATAGTGAAGGTCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
ENST00000487795.1
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGGCCTCTGCGCATGCTaGACAATCCAGAGACAAATA +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLGLCAC*TIQRQI
Trigger: TATTTGTCTCTGGATTGTCAAGCATGCGCAGAGGCC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGTTTCCCGAAAAATCTaGTGCATCCTCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLVSRKI*CILMVA
Trigger: AGCCACCATGAGGATGCACAAGATTTTTCGGGAAAC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCGCTGAGGTGAGAAGATaGCCTGAATCCAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLAEVRR*PESRNL
Trigger: CAAATTCCTGGATTCAGGCAATCTTCTCACCTCAGC...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCATCAGCTCAAGCCCATaGGGCAACTGTCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLISSSP*GNCPFR
Trigger: TCTAAAAGGACAGTTGCCCAATGGGCTTGAGCTGAT...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTAGCCAGAAGTTGGAGGGGAGGGAACCACCCGGATCCTCTATCAGGAAAACTCTCACCCTCAAAGTTATaGGCTTTACAACGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: VARSWRGGNHPDPLSGKLSPSKL*ALQRLG
Trigger: CCCCAACCGTTGTAAAGCCAATAACTTTGAGGGTGA...GAGTTTTCCTGATAGAGGATCCGGGTGGTTCCCTCCCCTCCAACTTCTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS CCA 90 bp GTCAGCCAGAGACAACTGTCCCACAATCATGCCCTGTTCCAGCAATaGGGCTCCTGTTTCAGCAAGGCGATTCGATGTGATAACAATGGT +
Preference number: 5 (lower is better)
Translates to: VSQRQLSHNHALFQQ*GSCFSKAIRCDNNG
Trigger: ACCATTGTTATCACATCGAATCGCCTTGCTGAAACAGGAGCCCCATTGCTGGAACAGGGCATGATTGTGGGACAGTTGTCTCTGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS TCA 90 bp ATCTTTCCCCTTGAGATTGTGAATGACTGCTATCACCAGAACCTCTaGTACTGCTTCTCCGTTTTCGAGGCGGTTTCTCCACTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: IFPLEIVNDCYHQNL*YCFSVFEAVSPLCQ
Trigger: CTGGCACAGTGGAGAAACCGCCTCGAAAACGGAGAAGCAGTATCAGAGGTTCTGGTGATAGCAGTCATTCACAATCTCAAGGGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373549.8
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCCAGGGTTTCACTGTATaGCCCAGACTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSQGFTV*PRLVSN
Trigger: GTTGGAGACCAGTCTGGGCAATACAGTGAAACCCTG...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GCTTCTGGAGATGAGGATTCTCCACTGTTTCATCCCTTGGCAGTTGTGGATATGGTTTCCCGAAAAATCTaGTGCATCCTCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: ASGDEDSPLFHPLAVVDMVSRKI*CILMVA
Trigger: AGCCACCATGAGGATGCACAAGATTTTTCGGGAAAC...CATATCCACAACTGCCAAGGGATGAAACAGTGGAGAATCCTCATCTCCAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS TCA 90 bp AAAACAACGGTGAAAGCCTCCAGCTTCTCTCAGGCATTCAAATGCTaGCCATCACTTCCTGTGTCAAACTATGTCAGCAGACAGGACTTC +
Preference number: 5 (lower is better)
Translates to: KTTVKASSFSQAFKC*PSLPVSNYVSRQDF
Trigger: GAAGTCCTGTCTGCTGACATAGTTTGACACAGGAAGTGATGGTCAGCATTTGAATGCCTGAGAGAAGCTGGAGGCTTTCACCGTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS CCA 90 bp ATTCTTATACGCAACACTATTAGACGAATCCACAATGATGAACAGTaGCTTCCTGGTGAAAGGATAGAGATCCCCGGGATGAAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: ILIRNTIRRIHNDEQ*LPGERIEIPGMKAV
Trigger: CACTGCCTTCATCCCGGGGATCTCTATCCTTTCACCAGGAAGCCACTGTTCATCATTGTGGATTCGTCTAATAGTGTTGCGTATAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000467917.5
ENST00000477186.5
CDS-3UTR CAA 90 bp GGAGAAATGCCTGATCTATTGAACGTGAATGAGTCAGTAGCTGGGCAATATCACGTTTCCCGAAAAATCTaGTGCATCCTCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GEMPDLLNVNESVAGQYHVSRKI*CILMVA
Trigger: AGCCACCATGAGGATGCACAAGATTTTTCGGGAAAC...GTGATATTGCCCAGCTACTGACTCATTCACGTTCAATAGATCAGGCATTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS-3UTR CAA 90 bp AAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCGGCCTCTGCGCATGCTaGACAATCCAGAGACAAATA +
Preference number: 5 (lower is better)
Translates to: KILCILMVAEQKINLVRSGLCAC*TIQRQI
Trigger: TATTTGTCTCTGGATTGTCAAGCATGCGCAGAGGCC...GCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR CAA 90 bp TGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGACCACTGTTTCATCCCTaGGCAGTTGTGGATATGATT +
Preference number: 5 (lower is better)
Translates to: CILMVAEQKINLVRSKRRPLFHP*AVVDMI
Trigger: AATCATATCCACAACTGCCAAGGGATGAAACAGTGG...TCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTACTTGAGCCCAGGAGTTaGAGGCCAGCCTGCTCAACA +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLLEPRS*RPACST
Trigger: TGTTGAGCAGGCTGGCCTCAAACTCCTGGGCTCAAG...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCGAGTGCTTTTTCCCTTaGCTTTGCTCTGTTCTTAGT +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSECFFP*LCSVLS
Trigger: ACTAAGAACAGAGCAAAGCAAAGGGAAAAAGCACTC...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp AATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTGAAGATGTTGAATAGCACTTaGGGAGGCCAAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NPETNRKAIRGLFKKRVKMLNST*GGQGRQ
Trigger: CTGCCTGCCTTGGCCTCCCAAAGTGCTATTCAACAT...CTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494102.2
CDS-3UTR CAA 90 bp GTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCACCTACCCGAAAAATCTaGTGCATCCTCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VAEQKINLVRSKRRNSSPPTRKI*CILMVA
Trigger: AGCCACCATGAGGATGCACAAGATTTTTCGGGTAGG...TGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494102.2
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTATAGCTGCCCAATCTaGGAAGCAATTTCTCCTATT +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSYSCPI*EAISPI
Trigger: AATAGGAGAAATTGCTTCCAAGATTGGGCAGCTATA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCAAGGCCATTAGAGGATaGTTCAAAAAGAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSKAIRG*FKKRVK
Trigger: CTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTT...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TGCTTGACAATCCAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGGCCTCTGCGCATGCTaGACAATCCAGAGACAAATA +
Preference number: 5 (lower is better)
Translates to: CLTIQRQIGRPLEDCSKRGLCAC*TIQRQI
Trigger: TATTTGTCTCTGGATTGTCAAGCATGCGCAGAGGCC...TCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTGGATTGTCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR CAA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCACTATGAATAGCTTTTaGGGTCTCAGCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLTMNSF*GLSFLF
Trigger: GAAGAGAAAGCTGAGACCCAAAAAGCTATTCATAGT...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS CCA 90 bp TTTCCGATGTGCGTAAGTAATAATGATAGTATAGCTGCCCAATCTTaGAAGCAATTTCTCCTATTTGCCAGCGCTTCAAGCCATACCGAT +
Preference number: 5 (lower is better)
Translates to: FPMCVSNNDSIAAQS*KQFLLFASASSHTD
Trigger: ATCGGTATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGCTTCCAAGATTGGGCAGCTATACTATCATTATTACTTACGCACATCGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS-3UTR CAA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCCAAGTTCCATTCCACTaGATCTTCAGTATTAAATCG +
Preference number: 5 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLQVPFH*IFSIKS
Trigger: CGATTTAATACTGAAGATCAAGTGGAATGGAACTTG...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TCAAAGAACACGTTTCGAACATCCAGAATGGATGCTAATTCCAAAATGTGCTTCTCTCGTCTAGTAGGCTaGTCAGCTGATTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: SKNTFRTSRMDANSKMCFSRLVG*SADSCI
Trigger: AATGCAGGAATCAGCTGACAAGCCTACTAGACGAGA...GAAGCACATTTTGGAATTAGCATCCATTCTGGATGTTCGAAACGTGTTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CAA 90 bp ATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTATCAGAAGCACGCTATaGGCAGGCAGCTCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: MVAEQKINLVRSKRRNSSIRSTL*AGSSLK
Trigger: TTTTAAGGAGCTGCCTGCCAATAGCGTGCTTCTGAT...AGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCGTGGAAAATGAAAACTaGTTTCGACAACAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSVENEN*FRQQGF
Trigger: AAAACCCTGTTGTCGAAACAAGTTTTCATTTTCCAC...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCGACAGTTTGTGCAATTaGAAAACAAAGGAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLDSLCN*KTKECF
Trigger: AAAGCACTCCTTTGTTTTCAAATTGCACAAACTGTC...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GAGATACAGCCACAACCTAATTACAGCAGCATGAACAATGCCACTAGGATGTCCTTTTCTACTGTACTTTaGATTACCACTACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: EIQPQPNYSSMNNATRMSFSTVL*ITTTVL
Trigger: GAGGACAGTAGTGGTAATCAAAAGTACAGTAGAAAA...GGACATCCTAGTGGCATTGTTCATGCTGCTGTAATTAGGTTGTGGCTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATTGGCTTTACAACGGTaGGGGTCAGAGGTCACATTC +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSLALQR*GSEVTF
Trigger: GAATGTGACCTCTGACCCCAACCGTTGTAAAGCCAA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GGCCAAATTAGCAGACCTTGGTACCTGACTATATTTCCAGTCCAGAGTGTTCTCTTATCCCTCTATGGTTaGGAAGTATTTACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: GQISRPWYLTIFPVQSVLLSLYG*EVFTFG
Trigger: CCCAAAAGTAAATACTTCCAAACCATAGAGGGATAA...GAGAACACTCTGGACTGGAAATATAGTCAGGTACCAAGGTCTGCTAATTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS TCA 90 bp CAGAGACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGAGTaGAGAGGCTACCTCGCTGAGATTGATCTTGTAAAGCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QRQIGRPLEDCSKRE*RGYLAEIDLVKLLD
Trigger: ATCCAAAAGCTTTACAAGATCAATCTCAGCGAGGTAGCCTCTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336505.11
ENST00000373549.8
CDS-3UTR CAA 90 bp ACTGGAGAAATGCCTGATCTATTGAACGTGAATGAGTCAGTAGCTGGGCAATATAAGGCCATTAGAGGATaGTTCAAAAAGAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TGEMPDLLNVNESVAGQYKAIRG*FKKRVK
Trigger: CTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTT...ATATTGCCCAGCTACTGACTCATTCACGTTCAATAGATCAGGCATTTCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR CAA 90 bp AAAACTGGAGAAATGCCTGATCTATTGAACGTGAATGAGTCAGTAGCTGGGCAAAAGGCCATTAGAGGATaGTTCAAAAAGAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KTGEMPDLLNVNESVAGQKAIRG*FKKRVK
Trigger: CTTCACTCTCTTTTTGAACAATCCTCTAATGGCCTT...TTGCCCAGCTACTGACTCATTCACGTTCAATAGATCAGGCATTTCTCCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000494102.2
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAATTACAGAATCAGAGTaGGAGAAGACCTGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSITESE*EKTWAN
Trigger: GTTGGCCCAGGTCTTCTCCAACTCTGATTCTGTAAT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS TCA 90 bp TTCAGTCTTTTCAGTGAAATGTTGATATCTTTCCCCTTGAGATTGTaGATGACTGCTATCACCAGAACCTCTGATACTGCTTCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: FSLFSEMLISFPLRL*MTAITRTSDTASPF
Trigger: AAACGGAGAAGCAGTATCAGAGGTTCTGGTGATAGCAGTCATTCACAATCTCAAGGGGAAAGATATCAACATTTCACTGAAAAGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373549.8
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAAGCAATTTCTCCTATTaGCCAGCGCTTCAAGCCATA +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSSNFSY*PALQAI
Trigger: TATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGCT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTAGCAATTTCTCCTATTaGCCAGCGCTTCAAGCCATA +
Preference number: 5 (lower is better)
Translates to: LAVVDMILDNFVFPEKSCSNFSY*PALQAI
Trigger: TATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGCT...ACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTATCTCGTCTAGTAGGCTaGTCAGCTGATTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLSRLVG*SADSCI
Trigger: AATGCAGGAATCAGCTGACAAGCCTACTAGACGAGA...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAATCAGAAGCACGCTATaGGCAGGCAGCTCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLIRSTL*AGSSLK
Trigger: TTTTAAGGAGCTGCCTGCCAATAGCGTGCTTCTGAT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp CGAAAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGGAAATGCCTGATCTATaGAACGTGAATGAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: RKILCILMVAEQKINLVREMPDL*NVNESV
Trigger: TACTGACTCATTCACGTTCAATAGATCAGGCATTTC...CCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR CAA 90 bp AAAATCTTGTGCATCCTCATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCGAAATGCCTGATCTATaGAACGTGAATGAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: KILCILMVAEQKINLVRSEMPDL*NVNESV
Trigger: TACTGACTCATTCACGTTCAATAGATCAGGCATTTC...GCTCCTCACAAGATTTATCTTTTGTTCAGCCACCATGAGGATGCACAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCACCACTGTTTCATCCCTaGGCAGTTGTGGATATGATT +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSPLFHP*AVVDMI
Trigger: AATCATATCCACAACTGCCAAGGGATGAAACAGTGG...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp GTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTCCATGGGCAATATCACGGTaGATTTTTCGAAGATATTCT +
Preference number: 5 (lower is better)
Translates to: VAEQKINLVRSKRRNSSPWAISR*IFRRYS
Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...TGGAGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR CAA 90 bp TTTAATAGTCATCAATGGTATTCTCAAAGAACACGTTTCGAACATCCAGAATGGCCACTGTTTCATCCCTaGGCAGTTGTGGATATGATT +
Preference number: 5 (lower is better)
Translates to: FNSHQWYSQRTRFEHPEWPLFHP*AVVDMI
Trigger: AATCATATCCACAACTGCCAAGGGATGAAACAGTGG...CCATTCTGGATGTTCGAAACGTGTTCTTTGAGAATACCATTGATGACTATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CAA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGAGAATATATCATCAACTaGCAGAACACAAGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGEYIIN*QNTSGL
Trigger: GAGACCACTTGTGTTCTGCAAGTTGATGATATATTC...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAATCCTTGGGAGAGGTTaGAAGGCCCAGATTTTTATA +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSILGRG*KAQIFI
Trigger: TATAAAAATCTGGGCCTTCAAACCTCTCCCAAGGAT...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp AACAGGGTAAATAGTTCTCTTGGTGGTTGGAGTGGGGAAATCAATATTTTTGGATTGTGCTTCAGTCTCTaGAGGAGAGCTAATATAACT +
Preference number: 5 (lower is better)
Translates to: NRVNSSLGGWSGEINIFGLCFSL*RRANIT
Trigger: AGTTATATTAGCTCTCCTCAAGAGACTGAAGCACAA...TCCAAAAATATTGATTTCCCCACTCCAACCACCAAGAGAACTATTTACCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp ATGGTGGCTGAACAAAAGATAAATCTTGTGAGGAGCAAGCGAAGAAATTCATCTTGGGCAATATCACGGTaGATTTTTCGAAGATATTCT +
Preference number: 5 (lower is better)
Translates to: MVAEQKINLVRSKRRNSSWAISR*IFRRYS
Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...AGATGAATTTCTTCGCTTGCTCCTCACAAGATTTATCTTTTGTTCAGCCACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467917.5
ENST00000477186.5
ENST00000494102.2
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCAGAAATGCCTGATCTATaGAACGTGAATGAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSEMPDL*NVNESV
Trigger: TACTGACTCATTCACGTTCAATAGATCAGGCATTTC...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TTGGCAGTTGTGGATATGATTCTGGATAATTTCGTGTTTCCCGAAAAATCTTGTGAAATGCCTGATCTATaGAACGTGAATGAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: LAVVDMILDNFVFPEKSCEMPDL*NVNESV
Trigger: TACTGACTCATTCACGTTCAATAGATCAGGCATTTC...ACAAGATTTTTCGGGAAACACGAAATTATCCAGAATCATATCCACAACTGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467917.5
ENST00000477186.5
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATTAAGTCTATTTTGTTaGCTTCCCCAATGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSLSLFC*LPQCPE
Trigger: TTCTGGGCATTGGGGAAGCAAACAAAATAGACTTAA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp TTAATAGTCATCAATGGTATTCTCAAAGAACACGTTTCGAACATCCAGAATGGATATAGCTGCCCAATCTaGGAAGCAATTTCTCCTATT +
Preference number: 5 (lower is better)
Translates to: LIVINGILKEHVSNIQNGYSCPI*EAISPI
Trigger: AATAGGAGAAATTGCTTCCAAGATTGGGCAGCTATA...TCCATTCTGGATGTTCGAAACGTGTTCTTTGAGAATACCATTGATGACTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477186.5
CDS-3UTR CAA 90 bp TCCCATTATCCAGGAAAGACTGAGAGGTACAGCAAAAATAGTTGTAAAGTATCATGGGCAATATCACGGTaGATTTTTCGAAGATATTCT +
Preference number: 5 (lower is better)
Translates to: SHYPGKTERYSKNSCKVSWAISR*IFRRYS
Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...TGATACTTTACAACTATTTTTGCTGTACCTCTCAGTCTTTCCTGGATAATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAATCTCCAGGGACAGTTaGTGCAATTTGAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLISRDS*CNLKTK
Trigger: CTTTGTTTTCAAATTGCACAAACTGTCCCTGGAGAT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAGTTCACAAATTGGCATaGCACGTATTTACTATCCTC +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLVHKLA*HVFTIL
Trigger: GAGGATAGTAAATACGTGCAATGCCAATTTGTGAAC...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS-3UTR CAA 90 bp CAGACTGGTCTCCAACTCCTGAGTAATAAAAATTCTTATTGTGCTAAAACACTAACAGTTTTCCTCTCTTaGAAGATTCAAGATCACTTC +
Preference number: 5 (lower is better)
Translates to: QTGLQLLSNKNSYCAKTLTVFLS*KIQDHF
Trigger: GAAGTGATCTTGAATCTTCAAAGAGAGGAAAACTGT...TAGTGTTTTAGCACAATAAGAATTTTTATTACTCAGGAGTTGGAGACCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336505.11
CDS CCA 72 bp CTTCACTATCAGAACGACCTGTGGGGAAAACGCCAGTaGCCGACAGGTAAATCAGAAGCACGCTATTGGCAG +
Preference number: 6 (lower is better)
Translates to: LHYQNDLWGKRQ*PTGKSEARYWQ
Trigger: CTGCCAATAGCGTGCTTCTGATTTACCTGTCGGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
ENST00000487795.1
CDS CCA 72 bp AGACAACTGTCCCACAATCATGCCCTGTTCCAGCAATaGGGCTCCTGTTTCAGCAAGGCGATTCGATGTGAT +
Preference number: 6 (lower is better)
Translates to: RQLSHNHALFQQ*GSCFSKAIRCD
Trigger: ATCACATCGAATCGCCTTGCTGAAACAGGAGCCCCATTGCTGGAACAGGGCATGATTGTGGGACAGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CCA 72 bp CGCAACACTATTAGACGAATCCACAATGATGAACAGTaGCTTCCTGGTGAAAGGATAGAGATCCCCGGGATG +
Preference number: 6 (lower is better)
Translates to: RNTIRRIHNDEQ*LPGERIEIPGM
Trigger: CATCCCGGGGATCTCTATCCTTTCACCAGGAAGCCACTGTTCATCATTGTGGATTCGTCTAATAGTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000467917.5
ENST00000477186.5
CDS CCA 72 bp CTTCCTGTGTCAAACTATGTCAGCAGACAGGACTTCTaGCTGGGAAGTAGCAGTAAAATGCCATCTCCCACA +
Preference number: 6 (lower is better)
Translates to: LPVSNYVSRQDF*LGSSSKMPSPT
Trigger: TGTGGGAGATGGCATTTTACTGCTACTTCCCAGCCAGAAGTCCTGTCTGCTGACATAGTTTGACACAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467917.5
CDS TCA 72 bp CTTGAGATTGTGAATGACTGCTATCACCAGAACCTCTaGTACTGCTTCTCCGTTTTCGAGGCGGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LEIVNDCYHQNL*YCFSVFEAVSP
Trigger: TGGAGAAACCGCCTCGAAAACGGAGAAGCAGTATCAGAGGTTCTGGTGATAGCAGTCATTCACAATCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373549.8
CDS CCA 72 bp CAAAATCATAAGGACCTTCACTATCAGAACGACCTGTaGGGAAAACGCCAGTGGCCGACAGGTAAATCAGAA +
Preference number: 6 (lower is better)
Translates to: QNHKDLHYQNDL*GKRQWPTGKSE
Trigger: TTCTGATTTACCTGTCGGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATAGTGAAGGTCCTTATGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
ENST00000487795.1
CDS CAA 90 bp CTGATTCCTGCATTCCTGGTTTATTCATCTGGGAAGCTAAATTCATaGGCTCCCTTTCCAGAGCTTGTAACATCCGGAACATGTCAACAG +
Preference number: 6 (lower is better)
Translates to: LIPAFLVYSSGKLNS*APFPELVTSGTCQQ
Trigger: CTGTTGACATGTTCCGGATGTTACAAGCTCTGGAAAGGGAGCCAATGAATTTAGCTTCCCAGATGAATAAACCAGGAATGCAGGAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
ENST00000487795.1
CDS GCA 72 bp TATAGCTGCCCAATCTTGGAAGCAATTTCTCCTATTTaGCAGCGCTTCAAGCCATACCGATTATCCAAGACT +
Preference number: 6 (lower is better)
Translates to: YSCPILEAISPI*QRFKPYRLSKT
Trigger: AGTCTTGGATAATCGGTATGGCTTGAAGCGCTGGCAAATAGGAGAAATTGCTTCCAAGATTGGGCAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CAA 72 bp GCATTCCTGGTTTATTCATCTGGGAAGCTAAATTCATaGGCTCCCTTTCCAGAGCTTGTAACATCCGGAACA +
Preference number: 6 (lower is better)
Translates to: AFLVYSSGKLNS*APFPELVTSGT
Trigger: TGTTCCGGATGTTACAAGCTCTGGAAAGGGAGCCAATGAATTTAGCTTCCCAGATGAATAAACCAGGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
ENST00000487795.1
CDS GCA 72 bp GAACTTAACCTGATTATTACAATTACCAATAATGAGTaGGTCAGCCAGAGACAACTGTCCCACAATCATGCC +
Preference number: 6 (lower is better)
Translates to: ELNLIITITNNE*VSQRQLSHNHA
Trigger: GGCATGATTGTGGGACAGTTGTCTCTGGCTGACGCACTCATTATTGGTAATTGTAATAATCAGGTTAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CCA 72 bp ATAACAAAAATCTGTAACTGTTTTCCTCTCTCCCTGTaGGATATCATCTTCAGCACCTCCAGAGGACATGAT +
Preference number: 6 (lower is better)
Translates to: ITKICNCFPLSL*DIIFSTSRGHD
Trigger: ATCATGTCCTCTGGAGGTGCTGAAGATGATATCCCACAGGGAGAGAGGAAAACAGTTACAGATTTTTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CCA 72 bp TGCGTAAGTAATAATGATAGTATAGCTGCCCAATCTTaGAAGCAATTTCTCCTATTTGCCAGCGCTTCAAGC +
Preference number: 6 (lower is better)
Translates to: CVSNNDSIAAQS*KQFLLFASASS
Trigger: GCTTGAAGCGCTGGCAAATAGGAGAAATTGCTTCCAAGATTGGGCAGCTATACTATCATTATTACTTACGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS TCA 72 bp TTCAGTGAAATGTTGATATCTTTCCCCTTGAGATTGTaGATGACTGCTATCACCAGAACCTCTGATACTGCT +
Preference number: 6 (lower is better)
Translates to: FSEMLISFPLRL*MTAITRTSDTA
Trigger: AGCAGTATCAGAGGTTCTGGTGATAGCAGTCATTCACAATCTCAAGGGGAAAGATATCAACATTTCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373549.8
CDS CAA 72 bp AGCTGCTACTTCTTGAAGCACCAAGTTCCATTCCACTaGATCTTCAGTATTAAATCGGTGAGTATAATCTTC +
Preference number: 6 (lower is better)
Translates to: SCYFLKHQVPFH*IFSIKSVSIIF
Trigger: GAAGATTATACTCACCGATTTAATACTGAAGATCAAGTGGAATGGAACTTGGTGCTTCAAGAAGTAGCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CAA 90 bp CTCAATGAAAGCTGCTACTTCTTGAAGCACCAAGTTCCATTCCACTaGATCTTCAGTATTAAATCGGTGAGTATAATCTTCAATTTCATC +
Preference number: 6 (lower is better)
Translates to: LNESCYFLKHQVPFH*IFSIKSVSIIFNFI
Trigger: GATGAAATTGAAGATTATACTCACCGATTTAATACTGAAGATCAAGTGGAATGGAACTTGGTGCTTCAAGAAGTAGCAGCTTTCATTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5
CDS CCA 72 bp TTGCAGAATAGAAGGAAAAAGCCTCATTCAGATAGCTaGTTTCCGATGTGCGTAAGTAATAATGATAGTATA +
Preference number: 6 (lower is better)
Translates to: LQNRRKKPHSDS*FPMCVSNNDSI
Trigger: TATACTATCATTATTACTTACGCACATCGGAAACCAGCTATCTGAATGAGGCTTTTTCCTTCTATTCTGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336505.11
ENST00000373549.8
ENST00000477186.5