Pregenerated sensors for SCAF8 (Homo sapiens)
Ensembl gene IDs: ENSG00000213079Ensembl transcript IDs: ENST00000367178.8, ENST00000367186.7, ENST00000417268.3, ENST00000461219.5, ENST00000464628.1, ENST00000479234.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAGCGGGCCGCTGCGACCTCGGGGCGGAGTGGAAGGGCACGCGCTaGCGGGGAAGGGCTCCCTCAGCGGCAGAGCGGCACCGGCATGGC | + |
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Preference number: 5 (lower is better) Translates to: RAGRCDLGAEWKGTR*RGRAPSAAERHRHG Trigger: GCCATGCCGGTGCCGCTCTGCCGCTGAGGGAGCCCTTCCCCGCCAGCGCGTGCCCTTCCACTCCGCCCCGAGGTCGCAGCGGCCCGCTCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367178.8 |
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| CDS TCA 90 bp | GCAGCTGCAGCTGCAGCTGTAAGTTGTGCCGTAAGAGCTTGCAACTaGACAACAAGACCAGCATCTAGGGCCTGCAGAATGGAAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AAAAAAVSCAVRACN*TTRPASRACRMEGW Trigger: CCAGCCTTCCATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGTTGCAAGCTCTTACGGCACAACTTACAGCTGCAGCTGCAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 90 bp | CGCCACTGGAATCTGCAACATAGCAACAGGAGGAGGGAAAACCTCTaGCTGGGTTGTGACCACTGTCTCCTTTTCAACTGGAGTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RHWNLQHSNRRRENL*LGCDHCLLFNWSWA Trigger: AGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTCCCTCCTCCTGTTGCTATGTTGCAGATTCCAGTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | CACTGCAACCTCTGCCTGGGTTGTGACCACTGTCTCCTTTTCAACTaGAGTTGGGCTCTGAGTTGTCTGGACCGTCTCTTTAACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HCNLCLGCDHCLLFN*SWALSCLDRLFNRF Trigger: GAACCTGTTAAAGAGACGGTCCAGACAACTCAGAGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479234.1 |
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| CDS CCA 90 bp | AGGGAAAACCTCTGCCTGGGTTGTGACCACTGTCTCCTTTTCAACTaGAGTTGGGCTCTGAGTTGTCTGGACCGTCTCTTTAACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: RENLCLGCDHCLLFN*SWALSCLDRLFNRF Trigger: GAACCTGTTAAAGAGACGGTCCAGACAACTCAGAGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | GCCTGGGTTGTGACCACTGTCTCCTTTTCAACTGGAGTTGGGCTCTaGGTTGTCTGGACCGTCTCTTTAACAGGTTCTGAGCTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: AWVVTTVSFSTGVGL*VVWTVSLTGSELFT Trigger: TGTGAAAAGCTCAGAACCTGTTAAAGAGACGGTCCAGACAACTCAGAGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 ENST00000479234.1 |
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| CDS TCA 90 bp | TCCCTTTGCCTCTCCCAGGGTCTTCTGCGGTCATCAAAATCTCTGTaGACTTCTTGTCCAAATCCTCGGTTCCAAGGACCACTTCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLCLSQGLLRSSKSL*TSCPNPRFQGPLLG Trigger: TCCTAGAAGTGGTCCTTGGAACCGAGGATTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | AGCTGGCAGAGCGGAAGTAGCAAGATTGCTGGCAACAGAACCGCCTaGTATAACAAGGCTACCAAATCCAACATCTTTCACAGTTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: SWQSGSSKIAGNRTA*YNKATKSNIFHSFR Trigger: CCGGAAACTGTGAAAGATGTTGGATTTGGTAGCCTTGTTATACCAGGCGGTTCTGTTGCCAGCAATCTTGCTACTTCCGCTCTGCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | TTCAGGCTCTGCCTGTTTAGTTGGAGCATTAAAAACATTTCCAGCTaGCAGAGCGGAAGTAGCAAGATTGCTGGCAACAGAACCGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FRLCLFSWSIKNISS*QSGSSKIAGNRTAW Trigger: CCAGGCGGTTCTGTTGCCAGCAATCTTGCTACTTCCGCTCTGCCAGCTGGAAATGTTTTTAATGCTCCAACTAAACAGGCAGAGCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | GGCCTCACAAGATTCTCTCTTATATCTACAGGAGGTCTTCCAAAATaGTCCCTACCATCTAGTGGAGGCCGTCCAGGACCTTCTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GLTRFSLISTGGLPK*SLPSSGGRPGPSLG Trigger: TCCAAGAGAAGGTCCTGGACGGCCTCCACTAGATGGTAGGGATCATTTTGGAAGACCTCCTGTAGATATAAGAGAGAATCTTGTGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | GAGCTTGCAACTGAACAACAAGACCAGCATCTAGGGCCTGCAGAATaGAAGGCTGGGGCTTCTGTTGTTGTATCTGTAAGGTTTGTATTA | + |
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Preference number: 5 (lower is better) Translates to: ELATEQQDQHLGPAE*KAGASVVVSVRFVL Trigger: TAATACAAACCTTACAGATACAACAACAGAAGCCCCAGCCTTCCATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGTTGCAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | TGGTGGCTGTGTTCCCAGAAGTCCAGGAGTATTTGGAACATTTGGTaGCTGTACTCCTACAAGTCCAGAATTGTTAGGTATATTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: WWLCSQKSRSIWNIW*LYSYKSRIVRYIWG Trigger: CCCCCAAATATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACACAGCCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | ATGCTCTCTCTCATCAAAATCTCCTCTATGCCCCCAGGGCTTCTCTaGATTAAAGCCAAAGTGGTCTCTTCGACCAAGATGATCTATACC | + |
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Preference number: 5 (lower is better) Translates to: MLSLIKISSMPPGLL*IKAKVVSSTKMIYT Trigger: GGTATAGATCATCTTGGTCGAAGAGACCACTTTGGCTTTAATCCAGAGAAGCCCTGGGGGCATAGAGGAGATTTTGATGAGAGAGAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | GGCCGGACCCCAAGAATTTCAGAATTACTTGATACATTTGGTCTTTaGACTCCCAGAATTCCAGAATTGCTTGTCACATTTGGCGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GRTPRISELLDTFGL*TPRIPELLVTFGGC Trigger: ACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTAATTCTGAAATTCTTGGGGTCCGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | AGCTGGTGGCTGTGTTCCCAGAAGTCCAGGAGTATTTGGAACATTTaGTGGCTGTACTCCTACAAGTCCAGAATTGTTAGGTATATTTGG | + |
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Preference number: 5 (lower is better) Translates to: SWWLCSQKSRSIWNI*WLYSYKSRIVRYIW Trigger: CCAAATATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACACAGCCACCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | TCTATGGAATCATCCAAATTGACTTCAGGTTCAAGAAAATGCTGCTaGCTACTCCCTTGTGATGGTGACGCTGAATGCTCTGACCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SMESSKLTSGSRKCC*LLPCDGDAECSDPK Trigger: CTTTGGGTCAGAGCATTCAGCGTCACCATCACAAGGGAGTAGTCAGCAGCATTTTCTTGAACCTGAAGTCAATTTGGATGATTCCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | GTGACAACTGGAGGCGGAATCCCGGCTGCCATATCCAAAAGGGGCTaGATAATCTCACTCTTAAATACATTATTCTTCTGCCATAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VTTGGGIPAAISKRG*IISLLNTLFFCHKF Trigger: AAACTTATGGCAGAAGAATAATGTATTTAAGAGTGAGATTATTCAGCCCCTTTTGGATATGGCAGCCGGGATTCCGCCTCCAGTTGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 ENST00000461219.5 |
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| CDS GCA 90 bp | TCAAACAGGTTGGTTAAGTCTTGCTGTGTTGCCTTCTTGTCCACTTaGCCAACCCAGAGAGTAGTACTACATACACTTAGTGTTTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SNRLVKSCCVAFLST*PTQRVVLHTLSVLD Trigger: ATCTAAAACACTAAGTGTATGTAGTACTACTCTCTGGGTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACCAACCTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 90 bp | AGAAATCTGGTGGTCTATAAGATGAGGTACTTTTTCTTCAGGCTCTaGCTGTTTAGTTGGAGCATTAAAAACATTTCCAGCTGGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RNLVVYKMRYFFFRL*LFSWSIKNISSWQS Trigger: GCTCTGCCAGCTGGAAATGTTTTTAATGCTCCAACTAAACAGGCAGAGCCTGAAGAAAAAGTACCTCATCTTATAGACCACCAGATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | TGGATTAAAGCCAAAGTGGTCTCTTCGACCAAGATGATCTATACCTaGCCTCACAAGATTCTCTCTTATATCTACAGGAGGTCTTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: WIKAKVVSSTKMIYT*PHKILSYIYRRSSK Trigger: TTTGGAAGACCTCCTGTAGATATAAGAGAGAATCTTGTGAGGCCAGGTATAGATCATCTTGGTCGAAGAGACCACTTTGGCTTTAATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | ACTGATCTGGTGTTTTCACCAGAAGAAATCTGGTGGTCTATAAGATaGGGTACTTTTTCTTCAGGCTCTGCCTGTTTAGTTGGAGCATTA | + |
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Preference number: 5 (lower is better) Translates to: TDLVFSPEEIWWSIR*GTFSSGSACLVGAL Trigger: TAATGCTCCAACTAAACAGGCAGAGCCTGAAGAAAAAGTACCTCATCTTATAGACCACCAGATTTCTTCTGGTGAAAACACCAGATCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | ACTGGAAACATTAGATGGCCGGACCCCAAGAATTTCAGAATTACTTaGTACATTTGGTCTTTGGACTCCCAGAATTCCAGAATTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: TGNIRWPDPKNFRIT*YIWSLDSQNSRIAC Trigger: ACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTAATTCTGAAATTCTTGGGGTCCGGCCATCTAATGTTTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 90 bp | AATTACTTGATACATTTGGTCTTTGGACTCCCAGAATTCCAGAATTaGTTGTCACATTTGGCGGCTGTCCTCCTAAAATTGCAGCATTAC | + |
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Preference number: 5 (lower is better) Translates to: NYLIHLVFGLPEFQN*LSHLAAVLLKLQHY Trigger: GTAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 90 bp | GATGGCTGCCTTAGTAATTTGGGTCATTTTCGCTTTCGAAATGGGTaGTTTATAGTCATTCAGGGAATACAACTCGCTATTGAAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DGCLSNLGHFRFRNG*FIVIQGIQLAIEGL Trigger: AAGACCTTCAATAGCGAGTTGTATTCCCTGAATGACTATAAACCACCCATTTCGAAAGCGAAAATGACCCAAATTACTAAGGCAGCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000417268.3 ENST00000461219.5 |
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| CDS CCA 90 bp | GATGGCTGCCTTAGTAATTTGGGTCATTTTCGCTTTCGAAATGGGTaGTTTATAGTCATTCAGGGAATACAATATGCTTCTTGTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: DGCLSNLGHFRFRNG*FIVIQGIQYASCVH Trigger: ATGGACACAAGAAGCATATTGTATTCCCTGAATGACTATAAACCACCCATTTCGAAAGCGAAAATGACCCAAATTACTAAGGCAGCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367186.7 ENST00000464628.1 |
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| CDS CCA 90 bp | TATTTGGGGGTAGCACTCCCAAAAGTCCAGAACTATTTGACACACTaGGTGGCTGTATTCCCAATATTCCAGAGTTATTTAGAATATTTG | + |
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Preference number: 5 (lower is better) Translates to: YLGVALPKVQNYLTH*VAVFPIFQSYLEYL Trigger: CAAATATTCTAAATAACTCTGGAATATTGGGAATACAGCCACCCAGTGTGTCAAATAGTTCTGGACTTTTGGGAGTGCTACCCCCAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 90 bp | CTATATCCATATCCTGTTGCTGAATATCTATGGAATCATCCAAATTaGCTTCAGGTTCAAGAAAATGCTGCTGACTACTCCCTTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: LYPYPVAEYLWNHPN*LQVQENAADYSLVM Trigger: CATCACAAGGGAGTAGTCAGCAGCATTTTCTTGAACCTGAAGTCAATTTGGATGATTCCATAGATATTCAGCAACAGGATATGGATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | CGCTGCGACCTCGGGGCGGAGTGGAAGGGCACGCGCTaGCGGGGAAGGGCTCCCTCAGCGGCAGAGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RCDLGAEWKGTR*RGRAPSAAERH Trigger: GTGCCGCTCTGCCGCTGAGGGAGCCCTTCCCCGCCAGCGCGTGCCCTTCCACTCCGCCCCGAGGTCGCAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367178.8 |
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| CDS GCA 72 bp | GTGGCCGCGAGGAGGGGGCGACTCTCCACTCCCTTCTaGCCCTTCCTCCGACGGGCTCCTGTTTCACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VAARRGRLSTPF*PFLRRAPVSPP Trigger: GGGAGGTGAAACAGGAGCCCGTCGGAGGAAGGGGCAGAAGGGAGTGGAGAGTCGCCCCCTCCTCGCGGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417268.3 |
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| CDS GCA 72 bp | GGCGAAGACAGAGGAGGAAGCGCTGGCAGCAGCGGCTaGGGCATCCAATATGGCGGACTCGAGTCGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GEDRGGSAGSSG*GIQYGGLESGR Trigger: GCGGCCCGACTCGAGTCCGCCATATTGGATGCCGCAGCCGCTGCTGCCAGCGCTTCCTCCTCTGTCTTCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367186.7 ENST00000417268.3 ENST00000461219.5 |
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| CDS CCA 72 bp | TACTACTGGTGGAATCGTAGGGGGTGGCACAACAGGTaGGGGAACTGGAGGCGGCATGAAACCAGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: YYWWNRRGWHNR*GNWRRHETRWW Trigger: CCACCACCTGGTTTCATGCCGCCTCCAGTTCCCCCACCTGTTGTGCCACCCCCTACGATTCCACCAGTAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | AGCAGTGGTAGTGCTGGCCAAAACAGGTGTGACAACTaGAGGCGGAATCCCGGCTGCCATATCCAAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSGSAGQNRCDN*RRNPGCHIQKG Trigger: CCCCTTTTGGATATGGCAGCCGGGATTCCGCCTCCAGTTGTCACACCTGTTTTGGCCAGCACTACCACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 72 bp | GCTGCAGCTGTAAGTTGTGCCGTAAGAGCTTGCAACTaGACAACAAGACCAGCATCTAGGGCCTGCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: AAAVSCAVRACN*TTRPASRACRM Trigger: CATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGTTGCAAGCTCTTACGGCACAACTTACAGCTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | GCTGAATCAAGTACCGATGGGGGTGGGATTCCCCGTTaGGGTGGAATTCCAGGCTGTATTAAAGGGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: AESSTDGGGIPR*GGIPGCIKGNL Trigger: AAGATTCCCTTTAATACAGCCTGGAATTCCACCCCAACGGGGAATCCCACCCCCATCGGTACTTGATTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 72 bp | GTGACCACTGTCTCCTTTTCAACTGGAGTTGGGCTCTaGGTTGTCTGGACCGTCTCTTTAACAGGTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VTTVSFSTGVGL*VVWTVSLTGSE Trigger: CTCAGAACCTGTTAAAGAGACGGTCCAGACAACTCAGAGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 ENST00000479234.1 |
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| CDS CCA 72 bp | ACTGAACAACAAGACCAGCATCTAGGGCCTGCAGAATaGAAGGCTGGGGCTTCTGTTGTTGTATCTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: TEQQDQHLGPAE*KAGASVVVSVR Trigger: CCTTACAGATACAACAACAGAAGCCCCAGCCTTCCATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | AGCTGGTGGCTGTGTTCCCAGAAGTCCAGGAGTATTTaGAACATTTGGTGGCTGTACTCCTACAAGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SWWLCSQKSRSI*NIWWLYSYKSR Trigger: TCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACACAGCCACCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | TGTCATCCCTATCCCTTTGCCTCTCCCAGGGTCTTCTaGGGTCATCAAAATCTCTGTGAACTTCTTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CHPYPFASPRVF*GHQNLCELLVQ Trigger: TTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAAAGGGATAGGGATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | TCCAGAACTGAGTTTCTGAAGAGCTCGAAATGCATCTaGTCGATGAACCATGCAGACATAAGCACAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SRTEFLKSSKCI*SMNHADISTAP Trigger: CGGGGCTGTGCTTATGTCTGCATGGTTCATCGACAAGATGCATTTCGAGCTCTTCAGAAACTCAGTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | AAAACATTTCCAGCTGGCAGAGCGGAAGTAGCAAGATaGCTGGCAACAGAACCGCCTGGTATAACAAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: KTFPAGRAEVAR*LATEPPGITRL Trigger: TAGCCTTGTTATACCAGGCGGTTCTGTTGCCAGCAATCTTGCTACTTCCGCTCTGCCAGCTGGAAATGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | GGAGCATTAAAAACATTTCCAGCTGGCAGAGCGGAAGTAGCAAGATaGCTGGCAACAGAACCGCCTGGTATAACAAGGCTACCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: GALKTFPAGRAEVAR*LATEPPGITRLPNP Trigger: TGGATTTGGTAGCCTTGTTATACCAGGCGGTTCTGTTGCCAGCAATCTTGCTACTTCCGCTCTGCCAGCTGGAAATGTTTTTAATGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | GAGGACTTTGCAAGATCTGAGCTACAGCCGCAAGTGTATCTGTATTaGTTATCTGAGATACCCACGGATCAGGTAAGCCTTGGACCACAT | + |
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Preference number: 6 (lower is better) Translates to: EDFARSELQPQVYLY*LSEIPTDQVSLGPH Trigger: ATGTGGTCCAAGGCTTACCTGATCCGTGGGTATCTCAGATAACAAATACAGATACACTTGCGGCTGTAGCTCAGATCTTGCAAAGTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | ATCTGTCCAAACTCTTCAAACAGGTTGGTTAAGTCTTaGTGTGTTGCCTTCTTGTCCACTTGCCCAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: ICPNSSNRLVKS*CVAFLSTCPTQ Trigger: CTGGGTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACCAACCTGTTTGAAGAGTTTGGACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | ACAAGACCAGCATCTAGGGCCTGCAGAATGGAAGGCTaGGGCTTCTGTTGTTGTATCTGTAAGGTTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: TRPASRACRMEG*GFCCCICKVCI Trigger: AATACAAACCTTACAGATACAACAACAGAAGCCCCAGCCTTCCATTCTGCAGGCCCTAGATGCTGGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | CTGTGTTCCCAGAAGTCCAGGAGTATTTGGAACATTTaGTGGCTGTACTCCTACAAGTCCAGAATTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: LCSQKSRSIWNI*WLYSYKSRIVR Trigger: CCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | GCAAGATCTGAGCTACAGCCGCAAGTGTATCTGTATTaGTTATCTGAGATACCCACGGATCAGGTAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ARSELQPQVYLY*LSEIPTDQVSL Trigger: AAGGCTTACCTGATCCGTGGGTATCTCAGATAACAAATACAGATACACTTGCGGCTGTAGCTCAGATCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | TCAAACAGGTTGGTTAAGTCTTGCTGTGTTGCCTTCTaGTCCACTTGCCCAACCCAGAGAGTAGTACTACAT | + |
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Preference number: 6 (lower is better) Translates to: SNRLVKSCCVAF*STCPTQRVVLH Trigger: ATGTAGTACTACTCTCTGGGTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACCAACCTGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | CATTTGGTCTTTGGACTCCCAGAATTCCAGAATTGCTaGTCACATTTGGCGGCTGTCCTCCTAAAATTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLVFGLPEFQNC*SHLAAVLLKLQ Trigger: CTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | TATTTGGGGGTAGCACTCCCAAAAGTCCAGAACTATTaGACACACTGGGTGGCTGTATTCCCAATATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: YLGVALPKVQNY*THWVAVFPIFQ Trigger: CTGGAATATTGGGAATACAGCCACCCAGTGTGTCAAATAGTTCTGGACTTTTGGGAGTGCTACCCCCAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 72 bp | TCATCCAAATTGACTTCAGGTTCAAGAAAATGCTGCTaGCTACTCCCTTGTGATGGTGACGCTGAATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSKLTSGSRKCC*LLPCDGDAECS Trigger: AGAGCATTCAGCGTCACCATCACAAGGGAGTAGTCAGCAGCATTTTCTTGAACCTGAAGTCAATTTGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | TTGGTTAAGTCTTGCTGTGTTGCCTTCTTGTCCACTTaGCCAACCCAGAGAGTAGTACTACATACACTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LVKSCCVAFLST*PTQRVVLHTLS Trigger: ACTAAGTGTATGTAGTACTACTCTCTGGGTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | TTTGGACTCCCAGAATTCCAGAATTGCTTGTCACATTaGGCGGCTGTCCTCCTAAAATTGCAGCATTACTTG | + |
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Preference number: 6 (lower is better) Translates to: FGLPEFQNCLSH*AAVLLKLQHYL Trigger: CAAGTAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | GGAACATTTGGTGGCTGTACTCCTACAAGTCCAGAATaGTTAGGTATATTTGGGGGTAGCACTCCCAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GTFGGCTPTSPE*LGIFGGSTPKS Trigger: ACTTTTGGGAGTGCTACCCCCAAATATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | GGAGTATTTGGAACATTTGGTGGCTGTACTCCTACAAGTCCAGAATaGTTAGGTATATTTGGGGGTAGCACTCCCAAAAGTCCAGAACTA | + |
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Preference number: 6 (lower is better) Translates to: GVFGTFGGCTPTSPE*LGIFGGSTPKSPEL Trigger: TAGTTCTGGACTTTTGGGAGTGCTACCCCCAAATATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | ATACATTTGGTCTTTGGACTCCCAGAATTCCAGAATTaGTTGTCACATTTGGCGGCTGTCCTCCTAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: IHLVFGLPEFQN*LSHLAAVLLKL Trigger: CAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | TGTTCCCAGAAGTCCAGGAGTATTTGGAACATTTGGTaGCTGTACTCCTACAAGTCCAGAATTGTTAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: CSQKSRSIWNIW*LYSYKSRIVRY Trigger: ATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 72 bp | GATACATTTGGTCTTTGGACTCCCAGAATTCCAGAATaGCTTGTCACATTTGGCGGCTGTCCTCCTAAAATT | + |
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Preference number: 6 (lower is better) Translates to: DTFGLWTPRIPE*LVTFGGCPPKI Trigger: AATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | TACTTGATACATTTGGTCTTTGGACTCCCAGAATTCCAGAATTGCTaGTCACATTTGGCGGCTGTCCTCCTAAAATTGCAGCATTACTTG | + |
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Preference number: 6 (lower is better) Translates to: YLIHLVFGLPEFQNC*SHLAAVLLKLQHYL Trigger: CAAGTAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS TCA 72 bp | TCTGGATTAAAGCCAAAGTGGTCTCTTCGACCAAGATaGTCTATACCTGGCCTCACAAGATTCTCTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: SGLKPKWSLRPR*SIPGLTRFSLI Trigger: TATAAGAGAGAATCTTGTGAGGCCAGGTATAGATCATCTTGGTCGAAGAGACCACTTTGGCTTTAATCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | TACCAAATCCAACATCTTTCACAGTTTCCGGTGTCATaGATAATGACGGCTGCACTAAAGATGTTGGTACTA | + |
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Preference number: 6 (lower is better) Translates to: YQIQHLSQFPVS*IMTAALKMLVL Trigger: TAGTACCAACATCTTTAGTGCAGCCGTCATTATCCATGACACCGGAAACTGTGAAAGATGTTGGATTTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | CACTTTCTTAGCTTCTTGTTCAAAGACCTCCTCTTCCACTCCATCTaGCCCTTCATCTATATCCATATCCTGTTGCTGAATATCTATGGA | + |
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Preference number: 6 (lower is better) Translates to: HFLSFLFKDLLFHSI*PFIYIHILLLNIYG Trigger: TCCATAGATATTCAGCAACAGGATATGGATATAGATGAAGGGCAAGATGGAGTGGAAGAGGAGGTCTTTGAACAAGAAGCTAAGAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | TGCTTGTCACATTTGGCGGCTGTCCTCCTAAAATTGCAGCATTACTaGAAATATCATTTGGAATCACTGATCTGGTGTTTTCACCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLSHLAAVLLKLQHY*KYHLESLIWCFHQK Trigger: CTTCTGGTGAAAACACCAGATCAGTGATTCCAAATGATATTTCAAGTAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | CATTTGGTCTTTGGACTCCCAGAATTCCAGAATTGCTTGTCACATTaGGCGGCTGTCCTCCTAAAATTGCAGCATTACTTGAAATATCAT | + |
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Preference number: 6 (lower is better) Translates to: HLVFGLPEFQNCLSH*AAVLLKLQHYLKYH Trigger: ATGATATTTCAAGTAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CAA 90 bp | GAATTACTTGATACATTTGGTCTTTGGACTCCCAGAATTCCAGAATaGCTTGTCACATTTGGCGGCTGTCCTCCTAAAATTGCAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: ELLDTFGLWTPRIPE*LVTFGGCPPKIAAL Trigger: TAATGCTGCAATTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATCAAGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | GTGGTCTATAAGATGAGGTACTTTTTCTTCAGGCTCTaGCTGTTTAGTTGGAGCATTAAAAACATTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VVYKMRYFFFRL*LFSWSIKNISS Trigger: GCTGGAAATGTTTTTAATGCTCCAACTAAACAGGCAGAGCCTGAAGAAAAAGTACCTCATCTTATAGACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS GCA 72 bp | AGTATTTACAGTCTCCTGATCAATCATGCCTCCTTCTaGAAAACCTTCCAAGTCATCCACTTTAACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SIYSLLINHASF*KTFQVIHFNFF Trigger: GAAAAAGTTAAAGTGGATGACTTGGAAGGTTTTGCAGAAGGAGGCATGATTGATCAGGAGACTGTAAATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000367186.7 ENST00000417268.3 |
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| CDS CCA 72 bp | CTTAGTAATTTGGGTCATTTTCGCTTTCGAAATGGGTaGTTTATAGTCATTCAGGGAATACAACTCGCTATT | + |
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Preference number: 6 (lower is better) Translates to: LSNLGHFRFRNG*FIVIQGIQLAI Trigger: AATAGCGAGTTGTATTCCCTGAATGACTATAAACCACCCATTTCGAAAGCGAAAATGACCCAAATTACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367178.8 ENST00000417268.3 ENST00000461219.5 |
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| CDS CCA 72 bp | CTTAGTAATTTGGGTCATTTTCGCTTTCGAAATGGGTaGTTTATAGTCATTCAGGGAATACAATATGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSNLGHFRFRNG*FIVIQGIQYAS Trigger: AGAAGCATATTGTATTCCCTGAATGACTATAAACCACCCATTTCGAAAGCGAAAATGACCCAAATTACTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367186.7 ENST00000464628.1 |
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