RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000156304

Ensembl transcript IDs: ENST00000286835.12, ENST00000399804.5, ENST00000434667.3, ENST00000467731.1, ENST00000472318.1, ENST00000485790.1

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTaGAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCA +
Preference number: 1 (lower is better)
Translates to: EAIKLLTVPHQLARG*STAGADIIQHLYTS
Trigger: TGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
3UTR GCA 72 bp AAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTaGAGTACAGCGGGAGCGGATATAATACAGCATCTG +
Preference number: 3 (lower is better)
Translates to: KLLTVPHQLARG*STAGADIIQHL
Trigger: CAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACGTCCATGTTCGCGCTaGGGCGGCGGCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIRPCSR*GGGCSG
Trigger: CCCGGAGCAGCCGCCGCCGCAGCGCGAACATGGACG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATACACGGTGGCGGTGGGTaGAGGGGGTACTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIHGGGG*RGYCGS
Trigger: GCTGCCGCAGTACCCCCTGCACCCACCGCCACCGTG...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGTGGCGGCTGCGCTCTaGGTCTCGCTGACACGGCCC +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIVAAAL*VSLTRP
Trigger: GGGCCGTGTCAGCGAGACGCAGAGCGCAGCCGCCAC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACAGGCACGGTGGCGGTaGGTGCAGGGGGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAQARWR*VQGVLR
Trigger: CCGCAGTACCCCCTGCACCCACCGCCACCGTGCCTG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATACAGCAGCAGGCACGGTaGCGGTGGGTGCAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIQQQAR*RWVQGV
Trigger: TACCCCCTGCACCCACCGCCACCGTGCCTGCTGCTG...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCCGTCCATGTTCGCGCTaGGGCGGCGGCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLRPCSR*GGGCSG
Trigger: CCCGGAGCAGCCGCCGCCGCAGCGCGAACATGGACG...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGTTGCTGGGGCGCCTaGGGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGCWGA*GCGCCC
Trigger: ACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACAGCTGGCGCGGGGCTaGAGTACAGCGGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIQLARG*STAGAD
Trigger: ATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGCGCCCTCACGCACTaGCTCACACTGGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVRALTH*LTLARP
Trigger: CGGCCGGGCCAGTGTGAGCCAGTGCGTGAGGGCGCG...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR TCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATTCCCAGAGGAGGCGTaGAAGCAGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIFPEEA*KQAAGE
Trigger: CTCTCCAGCCGCCTGCTTTCACGCCTCCTCTGGGAA...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACGGGCAGGAAGAGGCTaGGCCCGAAGCGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVRAGRG*ARSGEA
Trigger: CGCCTCGCCGCTTCGGGCGCAGCCTCTTCCTGCCCG...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCCACGGTGGCGGTGGGTaGAGGGGGTACTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTHGGGG*RGYCGS
Trigger: GCTGCCGCAGTACCCCCTGCACCCACCGCCACCGTG...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGACACGGTGGCGGTGGGTaGAGGGGGTACTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGHGGGG*RGYCGS
Trigger: GCTGCCGCAGTACCCCCTGCACCCACCGCCACCGTG...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGTGCGGCTGTGGCTGCTaGTGTGGCTGCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRCGCGC*CGCCGG
Trigger: GCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCA...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGGTGGCTGCTGCTGCTaGTGCTGCTGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIGGCCC*CCCGCW
Trigger: CCAGCAACCACAGCAGCAGCAGCAGCAGCAGCCACC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCGCAGAGGCGGAGAGGTaGCGGGCCCCCTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTAEAER*RAPSQS
Trigger: GGACTGAGAGGGGGCCCGCCACCTCTCCGCCTCTGC...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGACAGGCACGGTGGCGGTaGGTGCAGGGGGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGQARWR*VQGVLR
Trigger: CCGCAGTACCCCCTGCACCCACCGCCACCGTGCCTG...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATGGAGGGCGCTGGAGTaGGATGAGACCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVWRALE*DETGPG
Trigger: GCCCGGCCCGGTCTCATCCCACTCCAGCGCCCTCCA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGTGCATCATGTGCGGTaGCATGGGACGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIVHHVR*HGTGRH
Trigger: ATGCCGCCCCGTCCCATGCCACCGCACATGATGCAC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTTTGGTGGTGGCGGCTaGGCTCTGCGTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHFGGGG*ALRLAD
Trigger: GTCAGCGAGACGCAGAGCGCAGCCGCCACCACCAAA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR GCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGGGCAGGAAGAGGCTaGGCCCGAAGCGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKRAGRG*ARSGEA
Trigger: CGCCTCGCCGCTTCGGGCGCAGCCTCTTCCTGCCCG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGGGCAGATTCGTGGGTaGAGCAGGTGGCACGGCAGA +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHGQIRG*SRWHGR
Trigger: TCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCC...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGGCAGATTCGTGGGTaGAGCAGGTGGCACGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGQIRG*SRWHGR
Trigger: TCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGGCGGTGGGCCTCTGTaGATCATGTGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHGGGPL*IMCGGM
Trigger: CATGCCACCGCACATGATGCACAGAGGCCCACCGCC...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTATGCGGCTGTGGCTGCTaGTGTGGCTGCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVCGCGC*CGCCGG
Trigger: GCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCA...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGGTTGCTGGGGCGCCTaGGGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYGCWGA*GCGCCC
Trigger: ACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACC...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCAGCTGGCGCGGGGCTaGAGTACAGCGGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYQLARG*STAGAD
Trigger: ATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGCGCCCTCACGCACTaGCTCACACTGGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKRALTH*LTLARP
Trigger: CGGCCGGGCCAGTGTGAGCCAGTGCGTGAGGGCGCG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAGCAGAGGCGGAGAGGTaGCGGGCCCCCTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVAEAER*RAPSQS
Trigger: GGACTGAGAGGGGGCCCGCCACCTCTCCGCCTCTGC...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAACCCGGTTGATGTGGTaGGACCTGTGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERITRLMW*DLWRWH
Trigger: GTGCCACCTCCACAGGTCCCACCACATCAACCGGGT...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGGGTGGGCAGATTCGTaGGTGCAGCAGGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREGWADS*VQQVAR
Trigger: CCGTGCCACCTGCTGCACCCACGAATCTGCCCACCC...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGTGCATCATGTGCGGTaGCATGGGACGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIVHHVR*HGTGRH
Trigger: ATGCCGCCCCGTCCCATGCCACCGCACATGATGCAC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACCCTGGTCCTGGCGGTaGGCCTCTGTGCATCATGTG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIPWSWR*ASVHHV
Trigger: CACATGATGCACAGAGGCCCACCGCCAGGACCAGGG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACCCTGGTCCTGGCGGTaGGCCTCTGTGCATCATGTG +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAPWSWR*ASVHHV
Trigger: CACATGATGCACAGAGGCCCACCGCCAGGACCAGGG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAAAAGCCCCCTGGTCCTaGCGGTGGGCCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAKAPWS*RWASVH
Trigger: ATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATACAGGTGGACCCGGTTaGTGTGGTGGGACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHTGGPG*CGGTCG
Trigger: TCCACAGGTCCCACCACATCAACCGGGTCCACCTGT...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTTCCCAGAGGAGGCGTaGAAGCAGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNFPEEA*KQAAGE
Trigger: CTCTCCAGCCGCCTGCTTTCACGCCTCCTCTGGGAA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTACTGCGGCAGCAGGTaGTGTCGTGGTGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHYCGSR*CRGDGS
Trigger: ACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGGGCAGATTCGTGGGTaGAGCAGGTGGCACGGCAGA +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREGQIRG*SRWHGR
Trigger: TCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCC...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAACCCGGTTGATGTGGTaGGACCTGTGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADITRLMW*DLWRWH
Trigger: GTGCCACCTCCACAGGTCCCACCACATCAACCGGGT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATATCCTGGGCGCAAAAATaGTGGAGGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADISWAQK*WRRRGR
Trigger: CCTCCCCCTCCTCCTCCACCATTTTTGCGCCCAGGA...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCGTGGGTGCAGCAGGTaGCACGGCAGAGCCATACAT +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHRGCSR*HGRAIH
Trigger: ATGTATGGCTCTGCCGTGCCACCTGCTGCACCCACG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACGTGGGTGCAGCAGGTaGCACGGCAGAGCCATACAT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTARGCSR*HGRAIH
Trigger: ATGTATGGCTCTGCCGTGCCACCTGCTGCACCCACG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGGGTGGGCAGATTCGTaGGTGCAGCAGGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRGWADS*VQQVAR
Trigger: CCGTGCCACCTGCTGCACCCACGAATCTGCCCACCC...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHGLQEG*ADSWVQ
Trigger: CTGCACCCACGAATCTGCCCACCCCTCCTGTAACCC...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATGGAGGGCGCTGGAGTaGGATGAGACCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTWRALE*DETGPG
Trigger: GCCCGGCCCGGTCTCATCCCACTCCAGCGCCCTCCA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATATTCCTGGAGGGCGCTaGAGTGGGATGAGACCGGGC +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNIPGGR*SGMRPG
Trigger: GCCCGGTCTCATCCCACTCCAGCGCCCTCCAGGAAT...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCCCTGGTCCTGGCGGTaGGCCTCTGTGCATCATGTG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREPWSWR*ASVHHV
Trigger: CACATGATGCACAGAGGCCCACCGCCAGGACCAGGG...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACATCGCAAAGCCCCCTaGTCCTGGCGGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVHRKAP*SWRWAS
Trigger: AGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATG...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTGGGCCCCCGAGCCCTaGCATTCCACCAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTWAPEP*HSTRPN
Trigger: GTTAGGCCTGGTGGAATGCCAGGGCTCGGGGGCCCA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGATGGGCCCCCGAGCCCTaGCATTCCACCAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGWAPEP*HSTRPN
Trigger: GTTAGGCCTGGTGGAATGCCAGGGCTCGGGGGCCCA...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACAGGTGCTGTCGTGGTaGCGGCAGTGGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIQVLSW*RQWYPL
Trigger: AAGAGGATACCACTGCCGTCACCACGACAGCACCTG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATTCTGCTACTGGGGCTaGATTACTGGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIFCYWG*ITGSRC
Trigger: GCAGCGGGAACCAGTAATGCAGCCCCAGTAGCAGAA...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGCTTGGAAAGGCTGCTaGACTGGTGGAGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIAWKGC*TGGVGG
Trigger: TCCTCCAACTCCACCAGTGCAGCAGCCTTTCCAAGC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGGCGGTGGGCCTCTGTaGATCATGTGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVGGGPL*IMCGGM
Trigger: CATGCCACCGCACATGATGCACAGAGGCCCACCGCC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGGCGGTGGGCCTCTGTaGATCATGTGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRGGGPL*IMCGGM
Trigger: CATGCCACCGCACATGATGCACAGAGGCCCACCGCC...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGGTTGCTGGGGCGCCTaGGGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTGCWGA*GCGCCC
Trigger: ACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAACATGTCCGTTTGGTaGTGGCGGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRENMSVW*WRLRSA
Trigger: CGCAGAGCGCAGCCGCCACCACCAAACGGACATGTT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACTGGGGCTGCATTACTaGTTCCCGCTGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTALGLHY*FPLPCP
Trigger: TGGACATGGCAGCGGGAACCAGTAATGCAGCCCCAG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACAGCAGCAGGCACGGTaGCGGTGGGTGCAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTQQQAR*RWVQGV
Trigger: TACCCCCTGCACCCACCGCCACCGTGCCTGCTGCTG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGTCGGCGTCTATCCCTaGACCGAGATCGAGAACGTC +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHVGVYP*TEIENV
Trigger: GACGTTCTCGATCTCGGTCCAGGGATAGACGCCGAC...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAAGAAGTGAAACAGGCTaGGTTACAGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIRSETG*VTGGVG
Trigger: GCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCT...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAGGTGGGGGCATTCCTaGAGGGCGCTGGAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLRWGHS*RALEWD
Trigger: ATCCCACTCCAGCGCCCTCCAGGAATGCCCCCACCT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACAAAGCCCCCTGGTCCTaGCGGTGGGCCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYKAPWS*RWASVH
Trigger: ATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTT...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCACAGGTGGACCCGGTTaGTGTGGTGGGACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLTGGPG*CGGTCG
Trigger: TCCACAGGTCCCACCACATCAACCGGGTCCACCTGT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGAAGCTTGGAAAGGCTaGTGCACTGGTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIEAWKG*CTGGVG
Trigger: TCCAACTCCACCAGTGCAGCAGCCTTTCCAAGCTTC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACTAACAAAGGGGCCATaGGGTGGGAAGGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTALTKGP*GGKGPF
Trigger: GAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTTAG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTCTTCCAAGTCTCTGTaGCTGTCCCGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESSKSL*LSRSGL
Trigger: GAGCCCTGACCGGGACAGGCACAGAGACTTGGAAGA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCATGTCCGTTTGGTGGTaGCGGCTGCGCTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTMSVWW*RLRSAS
Trigger: AGACGCAGAGCGCAGCCGCCACCACCAAACGGACAT...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCATGTCCGTTTGGTGGTaGCGGCTGCGCTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLMSVWW*RLRSAS
Trigger: AGACGCAGAGCGCAGCCGCCACCACCAAACGGACAT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTCAACATGTCCGTTTaGTGGTGGCGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAFNMSV*WWRLRS
Trigger: AGAGCGCAGCCGCCACCACCAAACGGACATGTTGAA...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAGCTGGGACGGAGTTTaGAGTGGCTTGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESWDGV*SGLCGR
Trigger: CCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAGGCTGCTGCACTGGTaGAGTTGGAGGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIRLLHW*SWRNHR
Trigger: CCTGTGATTCCTCCAACTCCACCAGTGCAGCAGCCT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACTGGACCCGGTTGATGTaGTGGGACCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYWTRLM*WDLWRW
Trigger: CCACCTCCACAGGTCCCACCACATCAACCGGGTCCA...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTGGACCCGGTTGATGTaGTGGGACCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTWTRLM*WDLWRW
Trigger: CCACCTCCACAGGTCCCACCACATCAACCGGGTCCA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGTGAAAGCAGGCGGCTaGAGAGCACCAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIVKAGG*RAPTTG
Trigger: ACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCAC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGTGGGCGCAAAAATGGTaGAGGAGGAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRWAQKW*RRRGRR
Trigger: CCTCCTCCCCCTCCTCCTCCACCATTTTTGCGCCCA...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCTCCTGGGCGCAAAAATaGTGGAGGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLSWAQK*WRRRGR
Trigger: CCTCCCCCTCCTCCTCCACCATTTTTGCGCCCAGGA...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAATTCCTGGAGGGCGCTaGAGTGGGATGAGACCGGGC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVIPGGR*SGMRPG
Trigger: GCCCGGTCTCATCCCACTCCAGCGCCCTCCAGGAAT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCATGTGCGGTGGCATaGGACGGGGCGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTSCAVA*DGAASK
Trigger: CTTTGATGCCGCCCCGTCCCATGCCACCGCACATGA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGATCATGTGCGGTGGCATaGGACGGGGCGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGSCAVA*DGAASK
Trigger: CTTTGATGCCGCCCCGTCCCATGCCACCGCACATGA...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAAAGCCCCCTGGTCCTaGCGGTGGGCCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYKAPWS*RWASVH
Trigger: ATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTT...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACATCGCAAAGCCCCCTaGTCCTGGCGGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTHRKAP*SWRWAS
Trigger: AGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAAAAGGGGCCATGCGGTaGGAAGGGACCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAKGAMR*EGTFHS
Trigger: GGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTGGGCCCCCGAGCCCTaGCATTCCACCAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKWAPEP*HSTRPN
Trigger: GTTAGGCCTGGTGGAATGCCAGGGCTCGGGGGCCCA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCAGTTCCCCACCAGCTaGCGCGGGGCTGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKQFPTS*RGAAVQ
Trigger: CTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCAGTTCCCCACCAGCTaGCGCGGGGCTGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSQFPTS*RGAAVQ
Trigger: CTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTG...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACAGTTCCCCACCAGCTaGCGCGGGGCTGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTQFPTS*RGAAVQ
Trigger: CTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCCAGGTGCTGTCGTGGTaGCGGCAGTGGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLQVLSW*RQWYPL
Trigger: AAGAGGATACCACTGCCGTCACCACGACAGCACCTG...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAACAGGTGGACCCGGTTaGTGTGGTGGGACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVTGGPG*CGGTCG
Trigger: TCCACAGGTCCCACCACATCAACCGGGTCCACCTGT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTTCCCAGAGGAGGCGTaGAAGCAGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKFPEEA*KQAAGE
Trigger: CTCTCCAGCCGCCTGCTTTCACGCCTCCTCTGGGAA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACGTCCATGTTCGCGCTaGGGCGGCGGCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPRPCSR*GGGCSG
Trigger: CCCGGAGCAGCCGCCGCCGCAGCGCGAACATGGACG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTTCTGCTACTGGGGCTaGATTACTGGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNFCYWG*ITGSRC
Trigger: GCAGCGGGAACCAGTAATGCAGCCCCAGTAGCAGAA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTACTGCGGCAGCAGGTaGTGTCGTGGTGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYYCGSR*CRGDGS
Trigger: ACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGTGTATGCTGGCTGCTaGATGCCATCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAVYAGC*MPSPGK
Trigger: CTTTCCTGGAGATGGCATGCAGCAGCCAGCATACAC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGTGTGTATGCTGGCTaGTGCATGCCATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTACVYAG*CMPSPG
Trigger: TCCTGGAGATGGCATGCAGCAGCCAGCATACACACA...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGCTTGGAAAGGCTGCTaGACTGGTGGAGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREAWKGC*TGGVGG
Trigger: TCCTCCAACTCCACCAGTGCAGCAGCCTTTCCAAGC...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGTTCTTTTGTCCAGCTaGCCCACCCAGAGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAVLLSS*PTQRVV
Trigger: TACTACCCTCTGGGTGGGGCAGCTGGACAAAAGAAC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCTCTGTGCATCATGTaGGGTGGCATGGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKPLCIM*GGMGRG
Trigger: GCCCCGTCCCATGCCACCGCACATGATGCACAGAGG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAACTGCTGTGGCTGCTaGTGTGTTGGTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRENCCGC*CVGGGC
Trigger: ACAGCCTCCACCAACACAGCAGCAGCCACAGCAGTT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGTTTTGTTACCACCTaGCCTGTCTGTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGFVTT*PVCHLR
Trigger: CCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACTCTCTCCAGCGGGATaGCGGCAGCGGCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGLSPAG*RQRPES
Trigger: GGACTCGGGCCGCTGCCGCCATCCCGCTGGAGAGAG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286835.12
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAAGGCGGCGGCAGCGCTaGTCTTCAACATGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVRRRQR*SSTCPF
Trigger: AAACGGACATGTTGAAGACCAGCGCTGCCGCCGCCT...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAGGCGGCGGCAGCGCTaGTCTTCAACATGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLRRRQR*SSTCPF
Trigger: AAACGGACATGTTGAAGACCAGCGCTGCCGCCGCCT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAGCAGAGGCGGAGAGGTaGCGGGCCCCCTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGAEAER*RAPSQS
Trigger: GGACTGAGAGGGGGCCCGCCACCTCTCCGCCTCTGC...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACCAGGCACGGTGGCGGTaGGTGCAGGGGGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYQARWR*VQGVLR
Trigger: CCGCAGTACCCCCTGCACCCACCGCCACCGTGCCTG...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGAAAGGCTGCTGCACTaGTGGAGTTGGAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAERLLH*WSWRNH
Trigger: GTGATTCCTCCAACTCCACCAGTGCAGCAGCCTTTC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATATGTGGTGGGACCTGTaGAGGTGGCACTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHMWWDL*RWHCYR
Trigger: CCTATAACAGTGCCACCTCCACAGGTCCCACCACAT...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAGCACCAACTACAGGTaGACCCGGTTGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESTNYR*TRLMWW
Trigger: CCACCACATCAACCGGGTCCACCTGTAGTTGGTGCT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAACCAGGACCAAAGCCTaGAGGCGGTATTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVTRTKA*RRYSQR
Trigger: CCTCTGGGAATACCGCCTCCAGGCTTTGGTCCTGGT...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTGGAGTTATAGGAGGTaGGGGTCCAGGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHWSYRR*GSRRQK
Trigger: TTTCTGCCTCCTGGACCCCCACCTCCTATAACTCCA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGTTTGGGATGCTTATTaGTGGAGTGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIVWDAY*WSVRRR
Trigger: CCTCCTCCTCACACTCCACCAATAAGCATCCCAAAC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTGGAGGGCGCTGGAGTaGGATGAGACCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYWRALE*DETGPG
Trigger: GCCCGGCCCGGTCTCATCCCACTCCAGCGCCCTCCA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCAGGTGGGGGCATTCCTaGAGGGCGCTGGAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSRWGHS*RALEWD
Trigger: ATCCCACTCCAGCGCCCTCCAGGAATGCCCCCACCT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGTGCATCATGTGCGGTaGCATGGGACGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSVHHVR*HGTGRH
Trigger: ATGCCGCCCCGTCCCATGCCACCGCACATGATGCAC...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGGAGGAAGTGGAACCTaGTGGTGCATTGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNGGSGT*WCIGSC
Trigger: ACAGGATCCAATGCACCATCAGGTTCCACTTCCTCC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAACTTCCATTTCCTGCTaGTGCGGCTTCTGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERITSISC*CGFCVS
Trigger: ACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGT...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATCGATCCCGTCTTTCTTaGGATCGAGATCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNRSRLS*DRDRGE
Trigger: TTCTCCCCGATCTCGATCTCAAGAAAGACGGGATCG...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTGAGTGCCAAGAAGTaGAACAGGCTGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTALSAKK*NRLGYR
Trigger: CCTGTAACCCAGCCTGTTTCACTTCTTGGCACTCAA...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGGGAACCGCTGTAAGTaGGGTGGGGGCATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSGNRCK*GGGIPG
Trigger: TCCAGGAATGCCCCCACCTCACTTACAGCGGTTCCC...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGGGGAACCGCTGTAAGTaGGGTGGGGGCATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKGNRCK*GGGIPG
Trigger: TCCAGGAATGCCCCCACCTCACTTACAGCGGTTCCC...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGATTCTGCTACTGGGGCTaGATTACTGGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGFCYWG*ITGSRC
Trigger: GCAGCGGGAACCAGTAATGCAGCCCCAGTAGCAGAA...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATACTGCGGCAGCAGGTaGTGTCGTGGTGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTYCGSR*CRGDGS
Trigger: ACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGGGCAACTCCTTGAGTaGCAAGAAGTGAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAGQLLE*QEVKQA
Trigger: AGCCTGTTTCACTTCTTGGCACTCAAGGAGTTGCCC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGCTAACAAAGGGGCCATaGGGTGGGAAGGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRLTKGP*GGKGPF
Trigger: GAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTTAG...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCTGCGGCTGTGGCTGCTaGTGTGGCTGCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLCGCGC*CGCCGG
Trigger: GCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCA...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACAGCTGGCGCGGGGCTaGAGTACAGCGGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGQLARG*STAGAD
Trigger: ATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGAACATGTCCGTTTGGTaGTGGCGGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKNMSVW*WRLRSA
Trigger: CGCAGAGCGCAGCCGCCACCACCAAACGGACATGTT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTTCAACATGTCCGTTTaGTGGTGGCGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTFNMSV*WWRLRS
Trigger: AGAGCGCAGCCGCCACCACCAAACGGACATGTTGAA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAGGCGGCGGCAGCGCTaGTCTTCAACATGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVRRRQR*SSTCPF
Trigger: AAACGGACATGTTGAAGACCAGCGCTGCCGCCGCCT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGAGCGAAAAGAGCTCCTaGTTGAAGGCGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRSEKSS*LKALTA
Trigger: CGCCGTCAACGCCTTCAACCAGGAGCTCTTTTCGCT...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTGGGGCTGCATTACTaGTTCCCGCTGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVLGLHY*FPLPCP
Trigger: TGGACATGGCAGCGGGAACCAGTAATGCAGCCCCAG...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACCTGGGGCTGCATTACTaGTTCCCGCTGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYLGLHY*FPLPCP
Trigger: TGGACATGGCAGCGGGAACCAGTAATGCAGCCCCAG...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAAGAGCTGGGCAACTGTaGTACAGCTGGGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGRAGQL*YSWDGV
Trigger: AACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCAAAAGCATCAGAGCTaGGCAACTGTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHQKHQS*ATVVQL
Trigger: CAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTTG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACAGCAGCAGGCACGGTaGCGGTGGGTGCAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGQQQAR*RWVQGV
Trigger: TACCCCCTGCACCCACCGCCACCGTGCCTGCTGCTG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAAGCCATGGGAGGAAATaGAGGTGTAGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTASHGRK*RCRKKS
Trigger: GGACTTCTTCCTACACCTCCATTTCCTCCCATGGCT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGAAAGGCTGCTGCACTaGTGGAGTTGGAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNERLLH*WSWRNH
Trigger: GTGATTCCTCCAACTCCACCAGTGCAGCAGCCTTTC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTGGACCCGGTTGATGTaGTGGGACCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKWTRLM*WDLWRW
Trigger: CCACCTCCACAGGTCCCACCACATCAACCGGGTCCA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAGCACCAACTACAGGTaGACCCGGTTGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLSTNYR*TRLMWW
Trigger: CCACCACATCAACCGGGTCCACCTGTAGTTGGTGCT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTGGGCGCAAAAATGGTaGAGGAGGAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSWAQKW*RRRGRR
Trigger: CCTCCTCCCCCTCCTCCTCCACCATTTTTGCGCCCA...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAGGAATGGATACTGGTaGAGTTATAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIRNGYW*SYRRWG
Trigger: CCCCCACCTCCTATAACTCCACCAGTATCCATTCCT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCGTGGGTGCAGCAGGTaGCACGGCAGAGCCATACAT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSRGCSR*HGRAIH
Trigger: ATGTATGGCTCTGCCGTGCCACCTGCTGCACCCACG...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATCATGTGCGGTGGCATaGGACGGGGCGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTSCAVA*DGAASK
Trigger: CTTTGATGCCGCCCCGTCCCATGCCACCGCACATGA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACAAAGGGGCCATGCGGTaGGAAGGGACCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYKGAMR*EGTFHS
Trigger: GGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTT...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCAGGTGCTGTCGTGGTaGCGGCAGTGGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSQVLSW*RQWYPL
Trigger: AAGAGGATACCACTGCCGTCACCACGACAGCACCTG...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGAGGAAGTGGAACCTaGTGGTGCATTGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGGGSGT*WCIGSC
Trigger: ACAGGATCCAATGCACCATCAGGTTCCACTTCCTCC...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGGAGGAAGTGGAACCTaGTGGTGCATTGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRGGSGT*WCIGSC
Trigger: ACAGGATCCAATGCACCATCAGGTTCCACTTCCTCC...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGTTTCCGGTTTCACTTaGGGGAGGCCTTTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNVSGFT*GRPFCR
Trigger: TCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAAC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACCAGTTCCTCAGGCTTaGCTTTGTCCCATGGAATAT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIPVPQA*LCPMEY
Trigger: ATATTCCATGGGACAAAGTCAAGCCTGAGGAACTGG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTTATTGGTGGAGTGTaGGGAGGAGGAATGGATACT +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHLIGGV*GGGMDT
Trigger: AGTATCCATTCCTCCTCCTCACACTCCACCAATAAG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCGGACCTTTCATTCCATaGGGTGGAGGCATCGCAAAG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTGPFIP*GGGIAK
Trigger: CTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCC...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATTCTTGGTCTCTACCTaGATTGAACTGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIFLVST*IELLPV
Trigger: AACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAA...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACCCCTTCTCAAGTTCTaGAGCAGTGTCTACATTTCC +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIPLLKF*SSVYIS
Trigger: GGAAATGTAGACACTGCTTCAGAACTTGAGAAGGGG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAAGGAAAGCCAAATGGTaGCTGTGGAGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVRKAKW*LWRRRR
Trigger: TCTCCTCCTCCTCCACAGGCACCATTTGGCTTTCCT...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGTGTATGCTGGCTGCTaGATGCCATCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVVYAGC*MPSPGK
Trigger: CTTTCCTGGAGATGGCATGCAGCAGCCAGCATACAC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCGTGTATGCTGGCTGCTaGATGCCATCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLVYAGC*MPSPGK
Trigger: CTTTCCTGGAGATGGCATGCAGCAGCCAGCATACAC...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATGTGTGTATGCTGGCTaGTGCATGCCATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVCVYAG*CMPSPG
Trigger: TCCTGGAGATGGCATGCAGCAGCCAGCATACACACA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAGCTTGGAAAGGCTGCTaGACTGGTGGAGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVAWKGC*TGGVGG
Trigger: TCCTCCAACTCCACCAGTGCAGCAGCCTTTCCAAGC...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGATCGAGAACGTCGATaGCGAGACCTTCGAGATCTA +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNDRERR*RDLRDL
Trigger: TAGATCTCGAAGGTCTCGGCATCGACGTTCTCGATC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCGTTCTTTTGTCCAGCTaGCCCACCCAGAGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTVLLSS*PTQRVV
Trigger: TACTACCCTCTGGGTGGGGCAGCTGGACAAAAGAAC...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCGTTCTTTTGTCCAGCTaGCCCACCCAGAGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLVLLSS*PTQRVV
Trigger: TACTACCCTCTGGGTGGGGCAGCTGGACAAAAGAAC...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAACTGCTGTGGCTGCTaGTGTGTTGGTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVNCCGC*CVGGGC
Trigger: ACAGCCTCCACCAACACAGCAGCAGCCACAGCAGTT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACTCTCTCTGTCTCGATaGCCACTAGAGCGTCTATTT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTALSLSR*PLERLF
Trigger: AAATAGACGCTCTAGTGGGCATCGAGACAGAGAGAG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGTTTTGTTACCACCTaGCCTGTCTGTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGGFVTT*PVCHLR
Trigger: CCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACC...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCGGTTTTGTTACCACCTaGCCTGTCTGTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTGFVTT*PVCHLR
Trigger: CCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACC...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAACTGTGGTACAGCTaGGACGGAGTTTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVQLWYS*DGVWSG
Trigger: GCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTG...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAGAGCTGGGCAACTGTaGTACAGCTGGGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVRAGQL*YSWDGV
Trigger: AACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACATGCTGTGTGTATGCTaGCTGCTGCATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYMLCVC*LLHAIS
Trigger: GGAGATGGCATGCAGCAGCCAGCATACACACAGCAT...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAGCCATGGGAGGAAATaGAGGTGTAGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESHGRK*RCRKKS
Trigger: GGACTTCTTCCTACACCTCCATTTCCTCCCATGGCT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGTTTGGGATGCTTATTaGTGGAGTGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNVWDAY*WSVRRR
Trigger: CCTCCTCCTCACACTCCACCAATAAGCATCCCAAAC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGAAGTGAAACAGGCTaGGTTACAGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYRSETG*VTGGVG
Trigger: GCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCT...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCCCAGACACCAAGTTTaGGATGCTTATTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHPRHQV*DAYWWS
Trigger: ACTCCACCAATAAGCATCCCAAACTTGGTGTCTGGG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399804.5
CDS-3UTR TCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGTTCATTTTGTGCCTaGAAAGAAGCTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGSFCA*KEAWKG
Trigger: GCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGGTTCATTTTGTGCCTaGAAAGAAGCTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAGSFCA*KEAWKG
Trigger: GCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGTTTCCGGTTTCACTTaGGGGAGGCCTTTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVVSGFT*GRPFCR
Trigger: TCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAAC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACTGGCAACATCCTGCTaGGTAGTTCTTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVLATSC*VVLLSS
Trigger: GCTGGACAAAAGAACTACTCAGCAGGATGTTGCCAG...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCCCAGTAGATGGTGCCTaGAGTCCAATTACAGGACCA +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTPVDGA*SPITGP
Trigger: TGGTCCTGTAATTGGACTTCAGGCACCATCTACTGG...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACGGACCTTTCATTCCATaGGGTGGAGGCATCGCAAAG +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYGPFIP*GGGIAK
Trigger: CTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCC...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAACATCCCTATTGTTTTaGGGAGCTTTCACCGTTACC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTATSLLF*GAFTVT
Trigger: GGTAACGGTGAAAGCTCCTCAAAACAATAGGGATGT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR GCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTTTGGTGGTGGCGGCTaGGCTCTGCGTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYFGGGG*ALRLAD
Trigger: GTCAGCGAGACGCAGAGCGCAGCCGCCACCACCAAA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAGGAAAGCCAAATGGTaGCTGTGGAGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVRKAKW*LWRRRR
Trigger: TCTCCTCCTCCTCCACAGGCACCATTTGGCTTTCCT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATTGATGCTGTGTGTATaGTGGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVLMLCV*WLLHAI
Trigger: GATGGCATGCAGCAGCCAGCATACACACAGCATCAA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGGGCAACTCCTTGAGTaGCAAGAAGTGAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRGQLLE*QEVKQA
Trigger: AGCCTGTTTCACTTCTTGGCACTCAAGGAGTTGCCC...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGGGCAACTCCTTGAGTaGCAAGAAGTGAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYGQLLE*QEVKQA
Trigger: AGCCTGTTTCACTTCTTGGCACTCAAGGAGTTGCCC...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACCTCTGTGCATCATGTaGGGTGGCATGGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGPLCIM*GGMGRG
Trigger: GCCCCGTCCCATGCCACCGCACATGATGCACAGAGG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTAACAAAGGGGCCATaGGGTGGGAAGGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKLTKGP*GGKGPF
Trigger: GAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTTAG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACGGTGGCTGCTGCTGCTaGTGCTGCTGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYGGCCC*CCCGCW
Trigger: CCAGCAACCACAGCAGCAGCAGCAGCAGCAGCCACC...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCAGCGAAAAGAGCTCCTaGTTGAAGGCGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSSEKSS*LKALTA
Trigger: CGCCGTCAACGCCTTCAACCAGGAGCTCTTTTCGCT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACAACTGTGGTACAGCTaGGACGGAGTTTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTQLWYS*DGVWSG
Trigger: GCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAATGCTGTGTGTATGCTaGCTGCTGCATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVMLCVC*LLHAIS
Trigger: GGAGATGGCATGCAGCAGCCAGCATACACACAGCAT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAAGGCTGCTGCACTGGTaGAGTTGGAGGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTRLLHW*SWRNHR
Trigger: CCTGTGATTCCTCCAACTCCACCAGTGCAGCAGCCT...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCAGCACCAACTACAGGTaGACCCGGTTGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSSTNYR*TRLMWW
Trigger: CCACCACATCAACCGGGTCCACCTGTAGTTGGTGCT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGTGAAAGCAGGCGGCTaGAGAGCACCAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTVKAGG*RAPTTG
Trigger: ACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCAC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCCATTGGGTTGAATCCTaGGCGCAAAAATGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLHWVES*AQKWWR
Trigger: CCTCCACCATTTTTGCGCCCAGGATTCAACCCAATG...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACATTGGGTTGAATCCTaGGCGCAAAAATGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVHWVES*AQKWWR
Trigger: CCTCCACCATTTTTGCGCCCAGGATTCAACCCAATG...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACCCAGACACCACTGTTaGAATGGGATTTCCAATAGA +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADIPRHHC*NGISNR
Trigger: TCTATTGGAAATCCCATTCCAACAGTGGTGTCTGGG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAATTCCTGGAGGGCGCTaGAGTGGGATGAGACCGGGC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGIPGGR*SGMRPG
Trigger: GCCCGGTCTCATCCCACTCCAGCGCCCTCCAGGAAT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAAGGTGGGGGCATTCCTaGAGGGCGCTGGAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGRWGHS*RALEWD
Trigger: ATCCCACTCCAGCGCCCTCCAGGAATGCCCCCACCT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCATCGCAAAGCCCCCTaGTCCTGGCGGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTHRKAP*SWRWAS
Trigger: AGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAAAAGGGGCCATGCGGTaGGAAGGGACCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTKGAMR*EGTFHS
Trigger: GGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTT...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAACTTCCATTTCCTGCTaGTGCGGCTTCTGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGTSISC*CGFCVS
Trigger: ACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTATTGAGTGCCAAGAAGTaGAACAGGCTGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVLSAKK*NRLGYR
Trigger: CCTGTAACCCAGCCTGTTTCACTTCTTGGCACTCAA...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGGACCTTTCATTCCATaGGGTGGAGGCATCGCAAAG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTGPFIP*GGGIAK
Trigger: CTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTTCTTGGTCTCTACCTaGATTGAACTGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNFLVST*IELLPV
Trigger: AACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCCCCTTCTCAAGTTCTaGAGCAGTGTCTACATTTCC +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYPLLKF*SSVYIS
Trigger: GGAAATGTAGACACTGCTTCAGAACTTGAGAAGGGG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTTGATGCTGTGTGTATaGTGGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYLMLCV*WLLHAI
Trigger: GATGGCATGCAGCAGCCAGCATACACACAGCATCAA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAGTACTGCAAACACTTaGAGTTTCCGGTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADISTANT*SFRFHL
Trigger: CAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTGGCACTGTTATAGGTaGAGGAACAGGAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTWHCYR*RNRNRR
Trigger: CCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATGGCACTGTTATAGGTaGAGGAACAGGAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVWHCYR*RNRNRR
Trigger: CCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACCTCTGTGCATCATGTaGGGTGGCATGGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPPLCIM*GGMGRG
Trigger: GCCCCGTCCCATGCCACCGCACATGATGCACAGAGG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGGTGGCTGCTGCTGCTaGTGCTGCTGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTGGCCC*CCCGCW
Trigger: CCAGCAACCACAGCAGCAGCAGCAGCAGCAGCCACC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGACTCTCTCTGTCTCGATaGCCACTAGAGCGTCTATTT +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGLSLSR*PLERLF
Trigger: AAATAGACGCTCTAGTGGGCATCGAGACAGAGAGAG...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTTGGAGTGGCTTGTGTaGGAGGTTCAGAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRELEWLV*EVQKKL
Trigger: AAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAAAGGGCAGGAGACTGTaGTTTTGGAGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVKGRRL*FWRLLK
Trigger: TTTCAACAGCCTCCAAAACCACAGTCTCCTGCCCTT...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACAAGGGCAGGAGACTGTaGTTTTGGAGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYKGRRL*FWRLLK
Trigger: TTTCAACAGCCTCCAAAACCACAGTCTCCTGCCCTT...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCATGCTGTGTGTATGCTaGCTGCTGCATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSMLCVC*LLHAIS
Trigger: GGAGATGGCATGCAGCAGCCAGCATACACACAGCAT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAGCCATGGGAGGAAATaGAGGTGTAGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVSHGRK*RCRKKS
Trigger: GGACTTCTTCCTACACCTCCATTTCCTCCCATGGCT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGATGTGGTGGGACCTGTaGAGGTGGCACTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKMWWDL*RWHCYR
Trigger: CCTATAACAGTGCCACCTCCACAGGTCCCACCACAT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATGGAGTTATAGGAGGTaGGGGTCCAGGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTWSYRR*GSRRQK
Trigger: TTTCTGCCTCCTGGACCCCCACCTCCTATAACTCCA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAAAGAAGACCAGTAGATaGTGCCTGAAGTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAKKTSR*CLKSNY
Trigger: GTAATTGGACTTCAGGCACCATCTACTGGTCTTCTT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAATTTCTAAACTGCTGTaGCTGCTGCTGTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGISKLL*LLLCWW
Trigger: CCACCAACACAGCAGCAGCCACAGCAGTTTAGAAAT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATACTTCCAAACCTTTCTTaGTCTCTACCTGAATTGAAC +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERILPNLS*SLPELN
Trigger: GTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAG...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCAGTAGATGGTGCCTaGAGTCCAATTACAGGACCA +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKPVDGA*SPITGP
Trigger: TGGTCCTGTAATTGGACTTCAGGCACCATCTACTGG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCGGTCTCTACCTGAATTaGACTGCTGCCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLGLYLN*TAACYH
Trigger: ATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACC...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATACTACCTGAATTGAACTaGTGCCTGTTATCATTTCTA +
Preference number: 4 (lower is better)
Translates to: CLQFPTSWRGAAVQRERILPELN*CLLSFL
Trigger: TAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAG...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTCTTCCAAGTCTCTGTaGCTGTCCCGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYSSKSL*LSRSGL
Trigger: GAGCCCTGACCGGGACAGGCACAGAGACTTGGAAGA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGATCTTCCAAGTCTCTGTaGCTGTCCCGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGSSKSL*LSRSGL
Trigger: GAGCCCTGACCGGGACAGGCACAGAGACTTGGAAGA...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCACACCAAGTTTGGGATaGTTATTGGTGGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTTPSLG*LLVECE
Trigger: CTCACACTCCACCAATAAGCATCCCAAACTTGGTGT...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399804.5
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACTTGGAGTGGCTTGTGTaGGAGGTTCAGAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYLEWLV*EVQKKL
Trigger: AAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAA...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTCCATTAGGAGGAAGTaGAACCTGATGGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYSIRRK*NLMVHW
Trigger: CCAATGCACCATCAGGTTCCACTTCCTCCTAATGGA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGAAGAAGTCCAAATCCTaGCATTTGTCCATTAGGAGG +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREKKSKS*HLSIRR
Trigger: CCTCCTAATGGACAAATGCCAGGATTTGGACTTCTT...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCACCCGGTTGATGTGGTaGGACCTGTGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLTRLMW*DLWRWH
Trigger: GTGCCACCTCCACAGGTCCCACCACATCAACCGGGT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAACCAGGACCAAAGCCTaGAGGCGGTATTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGTRTKA*RRYSQR
Trigger: CCTCTGGGAATACCGCCTCCAGGCTTTGGTCCTGGT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCATCCTGGGCGCAAAAATaGTGGAGGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPSWAQK*WRRRGR
Trigger: CCTCCCCCTCCTCCTCCACCATTTTTGCGCCCAGGA...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCAGGAATGGATACTGGTaGAGTTATAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSRNGYW*SYRRWG
Trigger: CCCCCACCTCCTATAACTCCACCAGTATCCATTCCT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGAGGAATGGATACTGGTaGAGTTATAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKRNGYW*SYRRWG
Trigger: CCCCCACCTCCTATAACTCCACCAGTATCCATTCCT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGTTTGGGATGCTTATTaGTGGAGTGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTVWDAY*WSVRRR
Trigger: CCTCCTCCTCACACTCCACCAATAAGCATCCCAAAC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATAGCGATAGTAGAGTTTaGGATGCTTATTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNSDSRV*DAYWWS
Trigger: ACTCCACCAATAAGCATCCCAAACTCTACTATCGCT...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPGLQEG*ADSWVQ
Trigger: CTGCACCCACGAATCTGCCCACCCCTCCTGTAACCC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTGLQEG*ADSWVQ
Trigger: CTGCACCCACGAATCTGCCCACCCCTCCTGTAACCC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCTCTACATTTCCCACTTaGCTAATGGGAGGTTCAACG +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLSTFPT*LMGGST
Trigger: CGTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGA...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATCTACATTTCCCACTTaGCTAATGGGAGGTTCAACG +
Preference number: 4 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVSTFPT*LMGGST
Trigger: CGTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGACTTCCATTTCCTGCTaGTGCGGCTTCTGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKTSISC*CGFCVS
Trigger: ACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCTTATTGGTGGAGTGTaGGGAGGAGGAATGGATACT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSLIGGV*GGGMDT
Trigger: AGTATCCATTCCTCCTCCTCACACTCCACCAATAAG...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATAAGTGGTTCATTTTGTaGCTGAAAAGAAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHKWFIL*LKRSLE
Trigger: TTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTT...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAAGTACTGCAAACACTTaGAGTTTCCGGTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGSTANT*SFRFHL
Trigger: CAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATGGCACTGTTATAGGTaGAGGAACAGGAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTWHCYR*RNRNRR
Trigger: CCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAAGACCAGTAGATGGTaGCTGAAGTCCAATTACAGG +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYKTSRW*LKSNYR
Trigger: CCTGTAATTGGACTTCAGGCACCATCTACTGGTCTT...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACAACTGCTGTGGCTGCTaGTGTGTTGGTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYNCCGC*CVGGGC
Trigger: ACAGCCTCCACCAACACAGCAGCAGCCACAGCAGTT...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTTATCATTTCTAAACTaGTGTGGCTGCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNLSFLN*CGCCCV
Trigger: AACACAGCAGCAGCCACAGCAGTTTAGAAATGATAA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTTGGAGTGGCTTGTGTaGGAGGTTCAGAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYLEWLV*EVQKKL
Trigger: AAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGCTGGGACGGAGTTTaGAGTGGCTTGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLSWDGV*SGLCGR
Trigger: CCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACCAACTGTGGTACAGCTaGGACGGAGTTTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYQLWYS*DGVWSG
Trigger: GCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTG...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAAGAGCTGGGCAACTGTaGTACAGCTGGGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGRAGQL*YSWDGV
Trigger: AACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAGCTTTTTGTTCAGATaGTTGTGTAGGAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LTVPHQLARGCSTAGADISFLFR*LCRSCL
Trigger: AAGACAACTCCTACACAACCATCTGAACAAAAAGCT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTATTCCCATCATTCGTaGCTGAAACTGATCCATATT +
Preference number: 4 (lower is better)
Translates to: PHQLARGCSTAGADIIQHYSHHS*LKLIHI
Trigger: AATATGGATCAGTTTCAGCCACGAATGATGGGAATA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATCCATTAGGAGGAAGTaGAACCTGATGGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTSIRRK*NLMVHW
Trigger: CCAATGCACCATCAGGTTCCACTTCCTCCTAATGGA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGACGGCTTCTGTGTAAGTaGTTCATTTTGTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGRLLCK*FILCLK
Trigger: TTTCAGGCACAAAATGAACCACTTACACAGAAGCCG...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGTCGGCGTCTATCCCTaGACCGAGATCGAGAACGTC +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTVGVYP*TEIENV
Trigger: GACGTTCTCGATCTCGGTCCAGGGATAGACGCCGAC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCACCCAGGCAATCTTTATaGATTTCTGGTTCACTTTAT +
Preference number: 4 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAPRQSL*ISGSLY
Trigger: ATAAAGTGAACCAGAAATCCATAAAGATTGCCTGGG...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAAGAAGTGAAACAGGCTaGGTTACAGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGRSETG*VTGGVG
Trigger: GCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAAAGAAGACCAGTAGATaGTGCCTGAAGTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGKKTSR*CLKSNY
Trigger: GTAATTGGACTTCAGGCACCATCTACTGGTCTTCTT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCATTTCTAAACTGCTGTaGCTGCTGCTGTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSISKLL*LLLCWW
Trigger: CCACCAACACAGCAGCAGCCACAGCAGTTTAGAAAT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGGTATCCTCTTTCTTTaGTTCTTCCACAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTGILFL*FFHSFW
Trigger: CCAGAAGCTGTGGAAGAATCAAAGAAAGAGGATACC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACGATCCCGTCTTTCTTaGGATCGAGATCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGRSRLS*DRDRGE
Trigger: TTCTCCCCGATCTCGATCTCAAGAAAGACGGGATCG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGGTCTCTACCTGAATTaGACTGCTGCCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTGLYLN*TAACYH
Trigger: ATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGGTCTCTACCTGAATTaGACTGCTGCCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSGLYLN*TAACYH
Trigger: ATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACC...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGACATCCCTATTGTTTTaGGGAGCTTTCACCGTTACC +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKTSLLF*GAFTVT
Trigger: GGTAACGGTGAAAGCTCCTCAAAACAATAGGGATGT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAGAAGCTTGGAAAGGCTaGTGCACTGGTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGEAWKG*CTGGVG
Trigger: TCCAACTCCACCAGTGCAGCAGCCTTTCCAAGCTTC...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATAAGTGGTTCATTTTGTaGCTGAAAAGAAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNKWFIL*LKRSLE
Trigger: TTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTT...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGCGAAAAGAGCTCCTaGTTGAAGGCGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLSEKSS*LKALTA
Trigger: CGCCGTCAACGCCTTCAACCAGGAGCTCTTTTCGCT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAACCTGATGGTGCATTaGATCCTGTTGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVNLMVH*ILLYSH
Trigger: ATGGGAATACAACAGGATCCAATGCACCATCAGGTT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGGCTGCTGCACTGGTaGAGTTGGAGGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLRLLHW*SWRNHR
Trigger: CCTGTGATTCCTCCAACTCCACCAGTGCAGCAGCCT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCAATTCCTTTCCAATCTaGGTTAAGTGTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTNSFPI*VKCVTV
Trigger: GACAGTGACACACTTAACCCAGATTGGAAAGGAATT...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAATGTGGTGGGACCTGTaGAGGTGGCACTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGMWWDL*RWHCYR
Trigger: CCTATAACAGTGCCACCTCCACAGGTCCCACCACAT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGTGAAAGCAGGCGGCTaGAGAGCACCAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPVKAGG*RAPTTG
Trigger: ACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCAC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTGGAGTTATAGGAGGTaGGGGTCCAGGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYWSYRR*GSRRQK
Trigger: TTTCTGCCTCCTGGACCCCCACCTCCTATAACTCCA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATCTACATTTCCCACTTaGCTAATGGGAGGTTCAACG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTSTFPT*LMGGST
Trigger: CGTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCGATCCCGTCTTTCTTaGGATCGAGATCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTRSRLS*DRDRGE
Trigger: TTCTCCCCGATCTCGATCTCAAGAAAGACGGGATCG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACTGGCAACATCCTGCTaGGTAGTTCTTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGLATSC*VVLLSS
Trigger: GCTGGACAAAAGAACTACTCAGCAGGATGTTGCCAG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTTGAGTGCCAAGAAGTaGAACAGGCTGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYLSAKK*NRLGYR
Trigger: CCTGTAACCCAGCCTGTTTCACTTCTTGGCACTCAA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGGAAAGCCAAATGGTaGCTGTGGAGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLRKAKW*LWRRRR
Trigger: TCTCCTCCTCCTCCACAGGCACCATTTGGCTTTCCT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGAAGCTTGGAAAGGCTaGTGCACTGGTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPEAWKG*CTGGVG
Trigger: TCCAACTCCACCAGTGCAGCAGCCTTTCCAAGCTTC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTGGTTCATTTTGTaGCTGAAAAGAAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLKWFIL*LKRSLE
Trigger: TTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTT...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGACTACCTGAATTGAACTaGTGCCTGTTATCATTTCTA +
Preference number: 4 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGLPELN*CLLSFL
Trigger: TAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAG...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGAACCTTGTATTCTaGTTTACACTTTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRERNLVF*FTLFDE
Trigger: TTCATCAAAAAGTGTAAACCAGAATACAAGGTTCCG...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGAGCTTTTTGTTCAGATaGTTGTGTAGGAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRSFLFR*LCRSCL
Trigger: AAGACAACTCCTACACAACCATCTGAACAAAAAGCT...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCAGCTTTTTGTTCAGATaGTTGTGTAGGAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LARGCSTAGADIIQHLYTSFLFR*LCRSCL
Trigger: AAGACAACTCCTACACAACCATCTGAACAAAAAGCT...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACTATTCCCATCATTCGTaGCTGAAACTGATCCATATT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYYSHHS*LKLIHI
Trigger: AATATGGATCAGTTTCAGCCACGAATGATGGGAATA...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGAAAGGCTGCTGCACTaGTGGAGTTGGAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTERLLH*WSWRNH
Trigger: GTGATTCCTCCAACTCCACCAGTGCAGCAGCCTTTC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCCCAGGCAATCTTTATaGATTTCTGGTTCACTTTAT +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYPRQSL*ISGSLY
Trigger: ATAAAGTGAACCAGAAATCCATAAAGATTGCCTGGG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCTTGACTTTGTCCCATaGAATATAAGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: QLARGCSTAGADIIQHLYLDFVP*NISNTK
Trigger: CTTGGTGTTACTTATATTCCATGGGACAAAGTCAAG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAATTCCTTTCCAATCTaGGTTAAGTGTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVNSFPI*VKCVTV
Trigger: GACAGTGACACACTTAACCCAGATTGGAAAGGAATT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGACATTGGGTTGAATCCTaGGCGCAAAAATGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGHWVES*AQKWWR
Trigger: CCTCCACCATTTTTGCGCCCAGGATTCAACCCAATG...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGTTTCCGGTTTCACTTaGGGGAGGCCTTTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPVSGFT*GRPFCR
Trigger: TCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAAC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCTGGCAACATCCTGCTaGGTAGTTCTTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTLATSC*VVLLSS
Trigger: GCTGGACAAAAGAACTACTCAGCAGGATGTTGCCAG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACCTTATTGGTGGAGTGTaGGGAGGAGGAATGGATACT +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYLIGGV*GGGMDT
Trigger: AGTATCCATTCCTCCTCCTCACACTCCACCAATAAG...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCATTGGTAACATTTTCTaGTACTGGGGCTGCATTACT +
Preference number: 4 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSIGNIF*YWGCIT
Trigger: AGTAATGCAGCCCCAGTAGCAGAAAATGTTACCAAT...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCATTGATGCTGTGTGTATaGTGGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPLMLCV*WLLHAI
Trigger: GATGGCATGCAGCAGCCAGCATACACACAGCATCAA...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGATCGAGAACGTCGATaGCGAGACCTTCGAGATCTA +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPDRERR*RDLRDL
Trigger: TAGATCTCGAAGGTCTCGGCATCGACGTTCTCGATC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCGATCGAGAACGTCGATaGCGAGACCTTCGAGATCTA +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLDRERR*RDLRDL
Trigger: TAGATCTCGAAGGTCTCGGCATCGACGTTCTCGATC...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATTATCATTTCTAAACTaGTGTGGCTGCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTLSFLN*CGCCCV
Trigger: AACACAGCAGCAGCCACAGCAGTTTAGAAATGATAA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACCTGAATTGAACTGCTaGCTGTTATCATTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVPELNC*LLSFLN
Trigger: GTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGG...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACCTACCTGAATTGAACTaGTGCCTGTTATCATTTCTA +
Preference number: 4 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYLPELN*CLLSFL
Trigger: TAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAG...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAAAAGCATCAGAGCTaGGCAACTGTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTQKHQS*ATVVQL
Trigger: CAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTTG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTCCATTAGGAGGAAGTaGAACCTGATGGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYSIRRK*NLMVHW
Trigger: CCAATGCACCATCAGGTTCCACTTCCTCCTAATGGA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACTTCCAAACCTTTCTTaGTCTCTACCTGAATTGAAC +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTLPNLS*SLPELN
Trigger: GTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACGGTTCATTTTGTGCCTaGAAAGAAGCTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYGSFCA*KEAWKG
Trigger: GCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACC...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACCAGTTCCTCAGGCTTaGCTTTGTCCCATGGAATAT +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPPVPQA*LCPMEY
Trigger: ATATTCCATGGGACAAAGTCAAGCCTGAGGAACTGG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGTTCCTCAGGCTTaGCTTTGTCCCATGGAATAT +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTPVPQA*LCPMEY
Trigger: ATATTCCATGGGACAAAGTCAAGCCTGAGGAACTGG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCCCCTTCTCAAGTTCTaGAGCAGTGTCTACATTTCC +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLPLLKF*SSVYIS
Trigger: GGAAATGTAGACACTGCTTCAGAACTTGAGAAGGGG...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCATTACTGGTTCCCGCTaGCATGTCCAAAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLITGSR*HVQKRL
Trigger: CAACCTCTTTTGGACATGGCAGCGGGAACCAGTAAT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTATTACTGGTTCCCGCTaGCATGTCCAAAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTITGSR*HVQKRL
Trigger: CAACCTCTTTTGGACATGGCAGCGGGAACCAGTAAT...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCCTGAATTGAACTGCTaGCTGTTATCATTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKPELNC*LLSFLN
Trigger: GTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACTCTCTCTGTCTCGATaGCCACTAGAGCGTCTATTT +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPLSLSR*PLERLF
Trigger: AAATAGACGCTCTAGTGGGCATCGAGACAGAGAGAG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAAGGGCAGGAGACTGTaGTTTTGGAGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPKGRRL*FWRLLK
Trigger: TTTCAACAGCCTCCAAAACCACAGTCTCCTGCCCTT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTATTCCCATCATTCGTaGCTGAAACTGATCCATATT +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKYSHHS*LKLIHI
Trigger: AATATGGATCAGTTTCAGCCACGAATGATGGGAATA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACCCAGGCAATCTTTATaGATTTCTGGTTCACTTTAT +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTPRQSL*ISGSLY
Trigger: ATAAAGTGAACCAGAAATCCATAAAGATTGCCTGGG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACACTTGACTTTGTCCCATaGAATATAAGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTLDFVP*NISNTK
Trigger: CTTGGTGTTACTTATATTCCATGGGACAAAGTCAAG...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGGTATCCTCTTTCTTTaGTTCTTCCACAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTGILFL*FFHSFW
Trigger: CCAGAAGCTGTGGAAGAATCAAAGAAAGAGGATACC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR TCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTTTCTTGGTCTCTACCTaGATTGAACTGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTFLVST*IELLPV
Trigger: AACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAA...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAAGACCAGTAGATGGTaGCTGAAGTCCAATTACAGG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLKTSRW*LKSNYR
Trigger: CCTGTAATTGGACTTCAGGCACCATCTACTGGTCTT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTAAGACCAGTAGATGGTaGCTGAAGTCCAATTACAGG +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTKTSRW*LKSNYR
Trigger: CCTGTAATTGGACTTCAGGCACCATCTACTGGTCTT...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGGAACCTTGTATTCTaGTTTACACTTTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKRNLVF*FTLFDE
Trigger: TTCATCAAAAAGTGTAAACCAGAATACAAGGTTCCG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAAACCTGATGGTGCATTaGATCCTGTTGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGNLMVH*ILLYSH
Trigger: ATGGGAATACAACAGGATCCAATGCACCATCAGGTT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACAAGAAGTCCAAATCCTaGCATTTGTCCATTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYKKSKS*HLSIRR
Trigger: CCTCCTAATGGACAAATGCCAGGATTTGGACTTCTT...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCCAGACACCACTGTTaGAATGGGATTTCCAATAGA +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTPRHHC*NGISNR
Trigger: TCTATTGGAAATCCCATTCCAACAGTGGTGTCTGGG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACAAGAAGACCAGTAGATaGTGCCTGAAGTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYKKTSR*CLKSNY
Trigger: GTAATTGGACTTCAGGCACCATCTACTGGTCTTCTT...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACATTGGTAACATTTTCTaGTACTGGGGCTGCATTACT +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYIGNIF*YWGCIT
Trigger: AGTAATGCAGCCCCAGTAGCAGAAAATGTTACCAAT...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAATTGGTAACATTTTCTaGTACTGGGGCTGCATTACT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGIGNIF*YWGCIT
Trigger: AGTAATGCAGCCCCAGTAGCAGAAAATGTTACCAAT...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGTACTGCAAACACTTaGAGTTTCCGGTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLSTANT*SFRFHL
Trigger: CAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGATTATCATTTCTAAACTaGTGTGGCTGCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGLSFLN*CGCCCV
Trigger: AACACAGCAGCAGCCACAGCAGTTTAGAAATGATAA...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTAACCTGATGGTGCATTaGATCCTGTTGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTNLMVH*ILLYSH
Trigger: ATGGGAATACAACAGGATCCAATGCACCATCAGGTT...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAAGAAGTCCAAATCCTaGCATTTGTCCATTAGGAGG +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPKKSKS*HLSIRR
Trigger: CCTCCTAATGGACAAATGCCAGGATTTGGACTTCTT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCGGCTTCTGTGTAAGTaGTTCATTTTGTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: STAGADIIQHLYTSSSTLRLLCK*FILCLK
Trigger: TTTCAGGCACAAAATGAACCACTTACACAGAAGCCG...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAGCGATAGTAGAGTTTaGGATGCTTATTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPSDSRV*DAYWWS
Trigger: ACTCCACCAATAAGCATCCCAAACTCTACTATCGCT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000434667.3
CDS-3UTR CCA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACCTTGACTTTGTCCCATaGAATATAAGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYLDFVP*NISNTK
Trigger: CTTGGTGTTACTTATATTCCATGGGACAAAGTCAAG...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAATTCCTTTCCAATCTaGGTTAAGTGTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPNSFPI*VKCVTV
Trigger: GACAGTGACACACTTAACCCAGATTGGAAAGGAATT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR GCA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACCTGAATTGAACTGCTaGCTGTTATCATTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPPELNC*LLSFLN
Trigger: GTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp TGCTGTGGTTGCTGGGGCGCCTGCGGCTGTGGCTGCTGCTGTGGCTaGTGCGGCGGCTGTTGCCTTCCGTCTCTGTCTTCAGGACCCCCT +
Preference number: 5 (lower is better)
Translates to: CCGCWGACGCGCCCG*CGGCCLPSLSSGPP
Trigger: AGGGGGTCCTGAAGACAGAGACGGAAGGCAACAGCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CTGCTGCTGTGGTTGCTGGGGCGCCTGCGGCTGTGGCTGCTGCTGTaGCTGCTGCGGCGGCTGTTGCCTTCCGTCTCTGTCTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LLLWLLGRLRLWLLL*LLRRLLPSVSVFRT
Trigger: GGTCCTGAAGACAGAGACGGAAGGCAACAGCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACCACAGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp GGTGGAGGCATCGCAAAGCCCCCTGGTCCTGGCGGTGGGCCTCTGTaGATCATGTGCGGTGGCATGGGACGGGGCGGCATCAAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: GGGIAKPPGPGGGPL*IMCGGMGRGGIKGN
Trigger: GTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp GTTGGTGGAGGCTGTTGTGATGGTGGTGGCTGCTGCTGCTGCTGCTaGTGTGGTTGCTGGGGCGCCTGCGGCTGTGGCTGCTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VGGGCCDGGGCCCCC*CGCWGACGCGCCCG
Trigger: GCCACAGCAGCAGCCACAGCCGCAGGCGCCCCAGCAACCACAGCAGCAGCAGCAGCAGCAGCCACCACCATCACAACAGCCTCCACCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CCCCTGGTCCTGGCGGTGGGCCTCTGTGCATCATGTGCGGTGGCATaGGACGGGGCGGCATCAAAGGGAACCGCTGTAAGTGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PLVLAVGLCASCAVA*DGAASKGTAVSEVG
Trigger: CCCCACCTCACTTACAGCGGTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CATTCCATGAGGTGGAGGCATCGCAAAGCCCCCTGGTCCTGGCGGTaGGCCTCTGTGCATCATGTGCGGTGGCATGGGACGGGGCGGCAT +
Preference number: 5 (lower is better)
Translates to: HSMRWRHRKAPWSWR*ASVHHVRWHGTGRH
Trigger: ATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp ATCGCAAAGCCCCCTGGTCCTGGCGGTGGGCCTCTGTGCATCATGTaGGGTGGCATGGGACGGGGCGGCATCAAAGGGAACCGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: IAKPPGPGGGPLCIM*GGMGRGGIKGNRCK
Trigger: CTTACAGCGGTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp ACCTTTCATTCCATGAGGTGGAGGCATCGCAAAGCCCCCTGGTCCTaGCGGTGGGCCTCTGTGCATCATGTGCGGTGGCATGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: TFHSMRWRHRKAPWS*RWASVHHVRWHGTG
Trigger: CCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AAATGGTGGAGGAGGAGGGGGAGGAGGAACACCAGGACCAAAGCCTaGAGGCGGTATTCCCAGAGGAGGCGTGAAAGCAGGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KWWRRRGRRNTRTKA*RRYSQRRRESRRLE
Trigger: CTCCAGCCGCCTGCTTTCACGCCTCCTCTGGGAATACCGCCTCCAGGCTTTGGTCCTGGTGTTCCTCCTCCCCCTCCTCCTCCACCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 90 bp GAAGGGACCTTTCATTCCATGAGGTGGAGGCATCGCAAAGCCCCCTaGTCCTGGCGGTGGGCCTCTGTGCATCATGTGCGGTGGCATGGG +
Preference number: 5 (lower is better)
Translates to: EGTFHSMRWRHRKAP*SWRWASVHHVRWHG
Trigger: CCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AACAAAGGGGCCATGCGGTGGGAAGGGACCTTTCATTCCATGAGGTaGAGGCATCGCAAAGCCCCCTGGTCCTGGCGGTGGGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: NKGAMRWEGTFHSMR*RHRKAPWSWRWASV
Trigger: CACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCAGCTGGGACGGAGTTaGGAGTGGCTTGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PHQLARGCSTAGADIIQHQLGRS*EWLVWE
Trigger: CTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGCTGCACTGGTGGAGTaGGAGGAATCACAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIAALVE*EESQAE
Trigger: CTCAGCCTGTGATTCCTCCAACTCCACCAGTGCAGC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATATACAGGTGGACCCGGTaGATGTGGTGGGACCTGTGG +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIYRWTR*MWWDLW
Trigger: CCACAGGTCCCACCACATCAACCGGGTCCACCTGTA...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CCCGAGCCCTGGCATTCCACCAGGCCTAACAAAGGGGCCATGCGGTaGGAAGGGACCTTTCATTCCATGAGGTGGAGGCATCGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: PEPWHSTRPNKGAMR*EGTFHSMRWRHRKA
Trigger: GGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTTAGGCCTGGTGGAATGCCAGGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAGCTGCACTGGTGGAGTaGGAGGAATCACAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTAAALVE*EESQAE
Trigger: CTCAGCCTGTGATTCCTCCAACTCCACCAGTGCAGC...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTACAGGTGGACCCGGTaGATGTGGTGGGACCTGTGG +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREYRWTR*MWWDLW
Trigger: CCACAGGTCCCACCACATCAACCGGGTCCACCTGTA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTACAGGTGGACCCGGTaGATGTGGTGGGACCTGTGG +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNYRWTR*MWWDLW
Trigger: CCACAGGTCCCACCACATCAACCGGGTCCACCTGTA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AGCAGGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTTGATGTaGTGGGACCTGTGGAGGTGGCACTGTTATAGGTGCAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: SRRLESTNYRWTRLM*WDLWRWHCYRCRNR
Trigger: CCTGTTCCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 90 bp CAGAGGAGGCGTGAAAGCAGGCGGCTGGAGAGCACCAACTACAGGTaGACCCGGTTGATGTGGTGGGACCTGTGGAGGTGGCACTGTTAT +
Preference number: 5 (lower is better)
Translates to: QRRRESRRLESTNYR*TRLMWWDLWRWHCY
Trigger: ATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCACGCCTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGCTTCAACATGTCCGTTaGGTGGTGGCGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRLQHVR*VVAAAL
Trigger: GAGCGCAGCCGCCACCACCAAACGGACATGTTGAAG...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CAA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCTCCTGGTTGAAGGCGTaGACGGCGTCCATGTTCGCG +
Preference number: 5 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLSWLKA*TASMFA
Trigger: CGCGAACATGGACGCCGTCAACGCCTTCAACCAGGA...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCCTGGTTGAAGGCGTaGACGGCGTCCATGTTCGCG +
Preference number: 5 (lower is better)
Translates to: LARGCSTAGADIIQHLYTSWLKA*TASMFA
Trigger: CGCGAACATGGACGCCGTCAACGCCTTCAACCAGGA...GGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGCTGTTGGCCTTGAGTaGTCTGAAACAGCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIAVGLE*SETAEP
Trigger: TGGCTCAGCTGTTTCAGACAACTCAAGGCCAACAGC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATGCCTGAAAAGAAGCTaGGAAAGGCTGCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERICLKRS*ERLLHW
Trigger: CCAGTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCA...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATCGATCCCGTCTTTCTaGAGATCGAGATCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERISIPSF*RSRSGR
Trigger: TCTCCCCGATCTCGATCTCAAGAAAGACGGGATCGA...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATGTGGCTGCTGCTGTGTaGGTGGAGGCTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNVAAAV*VEAVVM
Trigger: CATCACAACAGCCTCCACCAACACAGCAGCAGCCAC...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS TCA 90 bp TGGCGGTGGGTGCAGGGGGTACTGCGGCAGCAGGTGCTGTCGTGGTaGCGGCAGTGGTATCCTCTTTCTTTGATTCTTCCACAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: WRWVQGVLRQQVLSW*RQWYPLSLILPQLL
Trigger: CAGAAGCTGTGGAAGAATCAAAGAAAGAGGATACCACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTACCCCCTGCACCCACCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 90 bp GTGAAAGCAGGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTTaGTGTGGTGGGACCTGTGGAGGTGGCACTGTTATAGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VKAGGWRAPTTGGPG*CGGTCGGGTVIGAG
Trigger: TCCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 90 bp CTCCTTGAGTGCCAAGAAGTGAAACAGGCTGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAGCAGGTGGCACGGCAGAGCCATACA +
Preference number: 5 (lower is better)
Translates to: LLECQEVKQAGLQEG*ADSWVQQVARQSHT
Trigger: TGTATGGCTCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCTTGGCACTCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CTGGAGTGGGATGAGACCGGGCCGGGCGCCAAGAAGACCAGTAGATaGTGCCTGAAGTCCAATTACAGGACCAGGGGCAACTCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LEWDETGPGAKKTSR*CLKSNYRTRGNSLS
Trigger: ACTCAAGGAGTTGCCCCTGGTCCTGTAATTGGACTTCAGGCACCATCTACTGGTCTTCTTGGCGCCCGGCCCGGTCTCATCCCACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTCCTGGTTGAAGGCGTaGACGGCGTCCATGTTCGCG +
Preference number: 5 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYSWLKA*TASMFA
Trigger: CGCGAACATGGACGCCGTCAACGCCTTCAACCAGGA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGCTGTTGGCCTTGAGTaGTCTGAAACAGCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIAVGLE*SETAEP
Trigger: TGGCTCAGCTGTTTCAGACAACTCAAGGCCAACAGC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATACTGAAGCTGTTGGCCTaGAGTTGTCTGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERILKLLA*SCLKQL
Trigger: CAGCTGTTTCAGACAACTCAAGGCCAACAGCTTCAG...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGCTGCACTGGTGGAGTaGGAGGAATCACAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVAALVE*EESQAE
Trigger: CTCAGCCTGTGATTCCTCCAACTCCACCAGTGCAGC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTGCCTGAAAAGAAGCTaGGAAAGGCTGCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: PHQLARGCSTAGADIIQHCLKRS*ERLLHW
Trigger: CCAGTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGTGGCTGCTGCTGTGTaGGTGGAGGCTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: QLARGCSTAGADIIQHLYVAAAV*VEAVVM
Trigger: CATCACAACAGCCTCCACCAACACAGCAGCAGCCAC...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGAGGTTCAACGGTTTaGTTACCACCTGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGGSTV*LPPALS
Trigger: AGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AGGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTTGATGTGGTaGGACCTGTGGAGGTGGCACTGTTATAGGTGCAGGAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: RRLESTNYRWTRLMW*DLWRWHCYRCRNRN
Trigger: ATTCCTGTTCCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATACTGAAGCTGTTGGCCTaGAGTTGTCTGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADILKLLA*SCLKQL
Trigger: CAGCTGTTTCAGACAACTCAAGGCCAACAGCTTCAG...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTCGATCCCGTCTTTCTaGAGATCGAGATCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESIPSF*RSRSGR
Trigger: TCTCCCCGATCTCGATCTCAAGAAAGACGGGATCGA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAGTTTCCGGTTTCACTaGAGGGAGGCCTTTTTGTCG +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADISFRFH*REAFLS
Trigger: CGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCAAGTTTGGGATGCTTATaGGTGGAGTGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SPPAGAGLQYSGSGYNTASLGCL*VECEEE
Trigger: CTCCTCCTCACACTCCACCAATAAGCATCCCAAACT...TGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCCCCAGACACCAAGTTaGGGATGCTTATTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREPQTPS*GCLLVE
Trigger: CTCCACCAATAAGCATCCCAAACTTGGTGTCTGGGG...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399804.5
CDS CCA 90 bp GAGAGCACCAACTACAGGTGGACCCGGTTGATGTGGTGGGACCTGTaGAGGTGGCACTGTTATAGGTGCAGGAACAGGAATAGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: ESTNYRWTRLMWWDL*RWHCYRCRNRNRRD
Trigger: GTCCCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGAAAAGAGCTCCTGGTaGAAGGCGTTGACGGCGTCC +
Preference number: 5 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTEKSSW*KALTAS
Trigger: GGACGCCGTCAACGCCTTCAACCAGGAGCTCTTTTC...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGATCTGCTGAAGCTGTaGGCCTTGAGTTGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIDLLKL*ALSCLK
Trigger: TTTCAGACAACTCAAGGCCAACAGCTTCAGCAGATC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCAGGAGACTGTGGTTTaGGAGGCTGTTGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: PHQLARGCSTAGADIIQHQETVV*EAVEKS
Trigger: AGACTTTTCAACAGCCTCCAAAACCACAGTCTCCTG...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATGTGCATTGGATCCTGTaGTATTCCCATCATTCGTGG +
Preference number: 5 (lower is better)
Translates to: PHQLARGCSTAGADIIQHVHWIL*YSHHSW
Trigger: CCACGAATGATGGGAATACAACAGGATCCAATGCAC...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCTCGATCCCGTCTTTCTaGAGATCGAGATCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLSIPSF*RSRSGR
Trigger: TCTCCCCGATCTCGATCTCAAGAAAGACGGGATCGA...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATAGGTAAATGCATTGGGTaGAATCCTGGGCGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: CLQFPTSWRGAAVQRERIGKCIG*NPGRKN
Trigger: ATTTTTGCGCCCAGGATTCAACCCAATGCATTTACC...TATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGGTGGCTGCTGCTGTGTaGGTGGAGGCTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKVAAAV*VEAVVM
Trigger: CATCACAACAGCCTCCACCAACACAGCAGCAGCCAC...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGGAGGTTCAACGGTTTaGTTACCACCTGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVGGSTV*LPPALS
Trigger: AGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACGGAGTTTGGAGTGGCTaGTGTGGGAGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYGVWSG*CGRFRR
Trigger: TCTTCTGAACCTCCCACACAAGCCACTCCAAACTCC...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAGGAGTTTGGAGTGGCTaGTGTGGGAGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVGVWSG*CGRFRR
Trigger: TCTTCTGAACCTCCCACACAAGCCACTCCAAACTCC...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCTGAAGCTGTTGGCCTaGAGTTGTCTGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: QLARGCSTAGADIIQHLYLKLLA*SCLKQL
Trigger: CAGCTGTTTCAGACAACTCAAGGCCAACAGCTTCAG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATCAGGAGACTGTGGTTTaGGAGGCTGTTGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNQETVV*EAVEKS
Trigger: AGACTTTTCAACAGCCTCCAAAACCACAGTCTCCTG...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTCCAAATCCTGGCATTaGTCCATTAGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRESKSWH*SIRRKW
Trigger: CCACTTCCTCCTAATGGACAAATGCCAGGATTTGGA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTCCAAATCCTGGCATTaGTCCATTAGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNSKSWH*SIRRKW
Trigger: CCACTTCCTCCTAATGGACAAATGCCAGGATTTGGA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTTGAGGGAGGCCTTTTaGTCGACGTTCTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQRELREAF*STFSLF
Trigger: AAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAAGTTTCCGGTTTCACTaGAGGGAGGCCTTTTTGTCG +
Preference number: 5 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGSFRFH*REAFLS
Trigger: CGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACT...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAGGCACGATAGGCATCTaGCCTATGAACCATAACAAT +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIGTIGI*PMNHNN
Trigger: ATTGTTATGGTTCATAGGCAAGATGCCTATCGTGCC...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATATGGTCTCTACCTGAATaGAACTGCTGCCTGTTATCA +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIWSLPE*NCCLLS
Trigger: TGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCA...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp GGAGAATGTCGGCGTCTATCCCTGGACCGAGATCGAGAACGTCGATaGCGAGACCTTCGAGATCTAGAACCAGATCTAGATCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GECRRLSLDRDRERR*RDLRDLEPDLDRLL
Trigger: AAGGAGGCGATCTAGATCTGGTTCTAGATCTCGAAGGTCTCGGCATCGACGTTCTCGATCTCGGTCCAGGGATAGACGCCGACATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 90 bp AGCCACAGCAGCAAAAGCATCAGAGCTGGGCAACTGTGGTACAGCTaGGACGGAGTTTGGAGTGGCTTGTGTGGGAGGTTCAGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: SHSSKSIRAGQLWYS*DGVWSGLCGRFRRN
Trigger: GTTTCTTCTGAACCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTTGCTGCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS CCA 90 bp TGGGATGCTTATTGGTGGAGTGTGAGGAGGAGGAATGGATACTGGTaGAGTTATAGGAGGTGGGGGTCCAGGAGGCAGAAAACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: WDAYWWSVRRRNGYW*SYRRWGSRRQKTWW
Trigger: CCACCAGGTTTTCTGCCTCCTGGACCCCCACCTCCTATAACTCCACCAGTATCCATTCCTCCTCCTCACACTCCACCAATAAGCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGTGATGAGAATCATCTaGGCTCTAGAGATGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QLARGCSTAGADIIQHLYVMRII*ALEMGG
Trigger: ACCTCCCATCTCTAGAGCCAAGATGATTCTCATCAC...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACCAGCTGGGACGGAGTTaGGAGTGGCTTGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYQLGRS*EWLVWE
Trigger: CTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTG...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACGGGGAAAGCAGCTTTTaGTTCAGATGGTTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: QLARGCSTAGADIIQHLYGESSF*FRWLCR
Trigger: CCTACACAACCATCTGAACAAAAAGCTGCTTTCCCC...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGGGAAAGCAGCTTTTaGTTCAGATGGTTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGGESSF*FRWLCR
Trigger: CCTACACAACCATCTGAACAAAAAGCTGCTTTCCCC...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTAGTGCATTGGATCCTGTaGTATTCCCATCATTCGTGG +
Preference number: 5 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVVHWIL*YSHHSW
Trigger: CCACGAATGATGGGAATACAACAGGATCCAATGCAC...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTATCCAGTTCCTCAGGCTaGACTTTGTCCCATGGAATA +
Preference number: 5 (lower is better)
Translates to: PAGAGLQYSGSGYNTASVSSSSG*TLSHGI
Trigger: TATTCCATGGGACAAAGTCAAGCCTGAGGAACTGGA...TACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTAAGTTTGGGATGCTTATaGGTGGAGTGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVSLGCL*VECEEE
Trigger: CTCCTCCTCACACTCCACCAATAAGCATCCCAAACT...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGTGGTCTCTACCTGAATaGAACTGCTGCCTGTTATCA +
Preference number: 5 (lower is better)
Translates to: SNCLQFPTSWRGAAVQREWSLPE*NCCLLS
Trigger: TGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCA...CTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATTGGTCTCTACCTGAATaGAACTGCTGCCTGTTATCA +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNWSLPE*NCCLLS
Trigger: TGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCA...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGTCTACATTTCCCACTaGGCTAATGGGAGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRVYISH*ANGRFN
Trigger: GTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGAC...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CATCAGAGCTGGGCAACTGTGGTACAGCTGGGACGGAGTTTGGAGTaGCTTGTGTGGGAGGTTCAGAAGAAACTTTTACTGGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HQSWATVVQLGRSLE*LVWEVQKKLLLEVE
Trigger: CTCCACCTCCAGTAAAAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS CCA 90 bp AAAATAACTTACCAAGAAGTGAAACAGGCTGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAGCAGGTGGCACGGCAGAGCCATACA +
Preference number: 5 (lower is better)
Translates to: KITYQEVKQAGLQEG*ADSWVQQVARQSHT
Trigger: TGTATGGCTCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCTTGGTAAGTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467731.1
CDS-3UTR CAA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCACAGCTGGGACGGAGTTaGGAGTGGCTTGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPQLGRS*EWLVWE
Trigger: CTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTG...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGTGGTTTTGGAGGCTGTaGAAAAGTCTGAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRWFWRL*KSLKDL
Trigger: CAGATCCTTCAGACTTTTCAACAGCCTCCAAAACCA...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGATGGTTTTGGAGGCTGTaGAAAAGTCTGAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGWFWRL*KSLKDL
Trigger: CAGATCCTTCAGACTTTTCAACAGCCTCCAAAACCA...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAAAACTGATCCATATTTaGATGCTGTGTGTATGCTGG +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADIKLIHI*MLCVCW
Trigger: CCAGCATACACACAGCATCAAAATATGGATCAGTTT...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTATCCAAATCCTGGCATTaGTCCATTAGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GKQSNCLQFPTSWRGAAVSKSWH*SIRRKW
Trigger: CCACTTCCTCCTAATGGACAAATGCCAGGATTTGGA...TACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATTGTAAGTGGTTCATTTaGTGCCTGAAAAGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PHQLARGCSTAGADIIQHCKWFI*CLKRSL
Trigger: CAAGCTTCTTTTCAGGCACAAAATGAACCACTTACA...ATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATATGTAAGTGGTTCATTTaGTGCCTGAAAAGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LTVPHQLARGCSTAGADICKWFI*CLKRSL
Trigger: CAAGCTTCTTTTCAGGCACAAAATGAACCACTTACA...TATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGGCACGATAGGCATCTaGCCTATGAACCATAACAAT +
Preference number: 5 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGGTIGI*PMNHNN
Trigger: ATTGTTATGGTTCATAGGCAAGATGCCTATCGTGCC...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCGGTAAATGCATTGGGTaGAATCCTGGGCGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLGKCIG*NPGRKN
Trigger: ATTTTTGCGCCCAGGATTCAACCCAATGCATTTACC...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGTGATGAGAATCATCTaGGCTCTAGAGATGGGAGGT +
Preference number: 5 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSVMRII*ALEMGG
Trigger: ACCTCCCATCTCTAGAGCCAAGATGATTCTCATCAC...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATCTCTTGAATACAAGGTaGTTCTACTTCCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNLLNTR*FYFHFL
Trigger: CAGGAAATGGAAGTAGAACAACCTTGTATTCAAGAG...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACATTGAGGGAGGCCTTTTaGTCGACGTTCTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTLREAF*STFSLF
Trigger: AAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAA...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACTCTGCCTTTATTCCTTaGTTTAAGGCCCAGGCAATC +
Preference number: 5 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYSAFIP*FKAQAI
Trigger: GATTGCCTGGGCCTTAAACAAAGGAATAAAGGCAGA...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTCCAGTTCCTCAGGCTaGACTTTGTCCCATGGAATA +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKSSSSG*TLSHGI
Trigger: TATTCCATGGGACAAAGTCAAGCCTGAGGAACTGGA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp ATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGATTCAGCACCTCCATTTaGAGCAACTTCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: IKLLTVPHQLARGCSTAGFSTSI*SNFIFR
Trigger: CCTGAAAATGAAGTTGCTCAAAATGGAGGTGCTGAA...TCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGTTCAGCACCTCCATTTaGAGCAACTTCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRFSTSI*SNFIFR
Trigger: CCTGAAAATGAAGTTGCTCAAAATGGAGGTGCTGAA...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCGTCTACATTTCCCACTaGGCTAATGGGAGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSVYISH*ANGRFN
Trigger: GTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGAC...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp ATTTCCCACTTGGCTAATGGGAGGTTCAACGGTTTTGTTACCACCTaGCCTGTCTGTCACCTCAGGCTTTTCCTTTCCTCGGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ISHLANGRFNGFVTT*PVCHLRLFLSSGFF
Trigger: GAAGAAGCCCGAGGAAAGGAAAAGCCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCCCATTAGCCAAGTGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AAAAGCATCAGAGCTGGGCAACTGTGGTACAGCTGGGACGGAGTTTaGAGTGGCTTGTGTGGGAGGTTCAGAAGAAACTTTTACTGGAGG +
Preference number: 5 (lower is better)
Translates to: KSIRAGQLWYSWDGV*SGLCGRFRRNFYWR
Trigger: CCTCCAGTAAAAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS-3UTR CAA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAGGAGTTTGGAGTGGCTaGTGTGGGAGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGGVWSG*CGRFRR
Trigger: TCTTCTGAACCTCCCACACAAGCCACTCCAAACTCC...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAGCTGTTGGCCTTGAGTaGTCTGAAACAGCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGAVGLE*SETAEP
Trigger: TGGCTCAGCTGTTTCAGACAACTCAAGGCCAACAGC...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTGGTTTTGGAGGCTGTaGAAAAGTCTGAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: RGCSTAGADIIQHLYTSSWFWRL*KSLKDL
Trigger: CAGATCCTTCAGACTTTTCAACAGCCTCCAAAACCA...GCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATCTATCAAGCAACTTCTaGTCAAATGCAGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: YSSPPAGAGLQYSGSGYNLSSNF*SNAVFC
Trigger: ACAGAAAACTGCATTTGACAAGAAGTTGCTTGATAG...ATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAGCGGAAACTGATCCATATTTaGATGCTGTGTGTATGCTGG +
Preference number: 5 (lower is better)
Translates to: QSNCLQFPTSWRGAAVQRKLIHI*MLCVCW
Trigger: CCAGCATACACACAGCATCAAAATATGGATCAGTTT...CCGCTGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCTGTAAGTGGTTCATTTaGTGCCTGAAAAGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GAGLQYSGSGYNTASVHLCKWFI*CLKRSL
Trigger: CAAGCTTCTTTTCAGGCACAAAATGAACCACTTACA...GAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGGGTAAATGCATTGGGTaGAATCCTGGGCGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKGKCIG*NPGRKN
Trigger: ATTTTTGCGCCCAGGATTCAACCCAATGCATTTACC...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACGGAGGTTCAACGGTTTaGTTACCACCTGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYGGSTV*LPPALS
Trigger: AGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCC...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp CTGAGCCATGGGAGGAAATGGAGGTGTAGGAAGAAGTCCAAATCCTaGCATTTGTCCATTAGGAGGAAGTGGAACCTGATGGTGCATTGG +
Preference number: 5 (lower is better)
Translates to: LSHGRKWRCRKKSKS*HLSIRRKWNLMVHW
Trigger: CCAATGCACCATCAGGTTCCACTTCCTCCTAATGGACAAATGCCAGGATTTGGACTTCTTCCTACACCTCCATTTCCTCCCATGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp CAGCTGGCGCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACCTATCAAGCAACTTCTaGTCAAATGCAGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QLARGCSTAGADIIQHLYLSSNF*SNAVFC
Trigger: ACAGAAAACTGCATTTGACAAGAAGTTGCTTGATAG...GTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGCGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTTGCCTGAAAAGAAGCTaGGAAAGGCTGCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTCLKRS*ERLLHW
Trigger: CCAGTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCA...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GGAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACCTCTTGAATACAAGGTaGTTCTACTTCCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSNQIAYSSPPAGAGLQYLLNTR*FYFHFL
Trigger: CAGGAAATGGAAGTAGAACAACCTTGTATTCAAGAG...GTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGTTCAGCACCTCCATTTaGAGCAACTTCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKFSTSI*SNFIFR
Trigger: CCTGAAAATGAAGTTGCTCAAAATGGAGGTGCTGAA...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 90 bp CATCATTCGTGGCTGAAACTGATCCATATTTTGATGCTGTGTGTATaGTGGCTGCTGCATGCCATCTCCAGGAAAGCCAAATGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: HHSWLKLIHILMLCV*WLLHAISRKAKWCL
Trigger: CAGGCACCATTTGGCTTTCCTGGAGATGGCATGCAGCAGCCAGCATACACACAGCATCAAAATATGGATCAGTTTCAGCCACGAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp AGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGAGTGATGAGAATCATCTaGGCTCTAGAGATGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGSGYNTASVHLKLYTPGVMRII*ALEMGG
Trigger: ACCTCCCATCTCTAGAGCCAAGATGATTCTCATCAC...TCCTGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GAAGCAATCAAATTGCTTACAGTTCCCCACCAGCTGGCGCGGGGCTGCAGTACAATGTCGCTTAACCTCTaGAATACAAGGTTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: EAIKLLTVPHQLARGCSTMSLNL*NTRLFY
Trigger: GTAGAACAACCTTGTATTCAAGAGGTTAAGCGACAT...TGTACTGCAGCCCCGCGCCAGCTGGTGGGGAACTGTAAGCAATTTGATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGATGTCGCTTAACCTCTaGAATACAAGGTTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKMSLNL*NTRLFY
Trigger: GTAGAACAACCTTGTATTCAAGAGGTTAAGCGACAT...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTCCAGTTCCTCAGGCTaGACTTTGTCCCATGGAATA +
Preference number: 5 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYSSSSG*TLSHGI
Trigger: TATTCCATGGGACAAAGTCAAGCCTGAGGAACTGGA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGTTTGGGATGCTTATaGGTGGAGTGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: STAGADIIQHLYTSSSTLSLGCL*VECEEE
Trigger: CTCCTCCTCACACTCCACCAATAAGCATCCCAAACT...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGATCTGCTGAAGCTGTaGGCCTTGAGTTGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTDLLKL*ALSCLK
Trigger: TTTCAGACAACTCAAGGCCAACAGCTTCAGCAGATC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCAGGAGACTGTGGTTTaGGAGGCTGTTGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTQETVV*EAVEKS
Trigger: AGACTTTTCAACAGCCTCCAAAACCACAGTCTCCTG...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGGGGAAAGCAGCTTTTaGTTCAGATGGTTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPGESSF*FRWLCR
Trigger: CCTACACAACCATCTGAACAAAAAGCTGCTTTCCCC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp GCGGGGCTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTATCAAGCAACTTCTaGTCAAATGCAGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: AGLQYSGSGYNTASVHLKLSSNF*SNAVFC
Trigger: ACAGAAAACTGCATTTGACAAGAAGTTGCTTGATAG...CTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGTGCATTGGATCCTGTaGTATTCCCATCATTCGTGG +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTVHWIL*YSHHSW
Trigger: CCACGAATGATGGGAATACAACAGGATCCAATGCAC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAGAACCTGATGGTGCATaGGATCCTGTTGTATTCCCA +
Preference number: 5 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPEPDGA*DPVVFP
Trigger: TGGGAATACAACAGGATCCAATGCACCATCAGGTTC...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCGAACCTGATGGTGCATaGGATCCTGTTGTATTCCCA +
Preference number: 5 (lower is better)
Translates to: STAGADIIQHLYTSSSTLEPDGA*DPVVFP
Trigger: TGGGAATACAACAGGATCCAATGCACCATCAGGTTC...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTGAACCTGATGGTGCATaGGATCCTGTTGTATTCCCA +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTEPDGA*DPVVFP
Trigger: TGGGAATACAACAGGATCCAATGCACCATCAGGTTC...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCTTGAGGGAGGCCTTTTaGTCGACGTTCTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: STAGADIIQHLYTSSSTLLREAF*STFSLF
Trigger: AAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAA...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp CTGCAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACTCTGCCTTTATTCCTTaGTTTAAGGCCCAGGCAATC +
Preference number: 5 (lower is better)
Translates to: LQYSGSGYNTASVHLKLYSAFIP*FKAQAI
Trigger: GATTGCCTGGGCCTTAAACAAAGGAATAAAGGCAGA...GTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS-3UTR CAA 90 bp AGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCGTCTACATTTCCCACTaGGCTAATGGGAGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: STAGADIIQHLYTSSSTLVYISH*ANGRFN
Trigger: GTTGAACCTCCCATTAGCCAAGTGGGAAATGTAGAC...GAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp AGGTTGTTCTACTTCCATTTCCTGCTGATGCGGCTTCTGTGTAAGTaGTTCATTTTGTGCCTGAAAAGAAGCTTGGAAAGGCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RLFYFHFLLMRLLCK*FILCLKRSLERLLH
Trigger: GTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGTAGAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTTCTGCCTTTATTCCTTaGTTTAAGGCCCAGGCAATC +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTSAFIP*FKAQAI
Trigger: GATTGCCTGGGCCTTAAACAAAGGAATAAAGGCAGA...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 90 bp TGGAACCTGATGGTGCATTGGATCCTGTTGTATTCCCATCATTCGTaGCTGAAACTGATCCATATTTTGATGCTGTGTGTATGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WNLMVHWILLYSHHS*LKLIHILMLCVCWL
Trigger: CAGCCAGCATACACACAGCATCAAAATATGGATCAGTTTCAGCCACGAATGATGGGAATACAACAGGATCCAATGCACCATCAGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS-3UTR CAA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAACATCCCTATTGTTTaGAGGAGCTTTCACCGTTAC +
Preference number: 5 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPNIPIV*RSFHRY
Trigger: GTAACGGTGAAAGCTCCTCAAAACAATAGGGATGTT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CAA 90 bp CAGTACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTAACATCCCTATTGTTTaGAGGAGCTTTCACCGTTAC +
Preference number: 5 (lower is better)
Translates to: QYSGSGYNTASVHLKLYTNIPIV*RSFHRY
Trigger: GTAACGGTGAAAGCTCCTCAAAACAATAGGGATGTT...AGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS-3UTR CAA 90 bp TACAGCGGGAGCGGATATAATACAGCATCTGTACACCTCAAGCTCTACACTCCAAAACTGATCCATATTTaGATGCTGTGTGTATGCTGG +
Preference number: 5 (lower is better)
Translates to: YSGSGYNTASVHLKLYTPKLIHI*MLCVCW
Trigger: CCAGCATACACACAGCATCAAAATATGGATCAGTTT...TGGAGTGTAGAGCTTGAGGTGTACAGATGCTGTATTATATCCGCTCCCGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS TCA 90 bp ATGGGTGATACTGGTTCTGTGTGTGAGGTTTCAGCACCTCCATTTTaGGCAACTTCATTTTCAGGCTTCTTAGGAATTCCTTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: MGDTGSVCEVSAPPF*ATSFSGFLGIPFQS
Trigger: AGATTGGAAAGGAATTCCTAAGAAGCCTGAAAATGAAGTTGCTCAAAATGGAGGTGCTGAAACCTCACACACAGAACCAGTATCACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 90 bp AAAGATCTTCTTCCAAACCTTTCTTGGTCTCTACCTGAATTGAACTaGTGCCTGTTATCATTTCTAAACTGCTGTGGCTGCTGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KDLLPNLSWSLPELN*CLLSFLNCCGCCCV
Trigger: AACACAGCAGCAGCCACAGCAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS TCA 90 bp CCTATTTCCAAAAGATCTTCTTCCAAACCTTTCTTGGTCTCTACCTaGATTGAACTGCTGCCTGTTATCATTTCTAAACTGCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PISKRSSSKPFLVST*IELLPVIISKLLWL
Trigger: CAGCCACAGCAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTTGGAAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS TCA 90 bp CACAGAAGGGATACAGAAGTGATAATTTCCATAACTCAAGTTGAGTaGTATAAATGGTGGGGTGGGTTATGTGAGAGAAATATACCTTGT +
Preference number: 5 (lower is better)
Translates to: HRRDTEVIISITQVE*YKWWGGLCERNIPC
Trigger: ACAAGGTATATTTCTCTCACATAACCCACCCCACCATTTATATCACTCAACTTGAGTTATGGAAATTATCACTTCTGTATCCCTTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485790.1
CDS CCA 90 bp TCATTTTCCACCCTATTTCCAAAAGATCTTCTTCCAAACCTTTCTTaGTCTCTACCTGAATTGAACTGCTGCCTGTTATCATTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: SFSTLFPKDLLPNLS*SLPELNCCLLSFLN
Trigger: GTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTTGGAAATAGGGTGGAAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp AGCGGGCGGGCCTCTCTCTCCCTCTCTCCAGCGGGATaGCGGCAGCGGCCCGAGTCCACGCCGCGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: SGRASLSLSPAG*RQRPESTPRGA
Trigger: TGCCCCGCGCGGCGTGGACTCGGGCCGCTGCCGCCATCCCGCTGGAGAGAGGGAGAGAGAGGCCCGCCCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286835.12
CDS CAA 90 bp GGGCGCCTGCGGCTGTGGCTGCTGCTGTGGCTGCTGCGGCGGCTGTaGCCTTCCGTCTCTGTCTTCAGGACCCCCTGGGCCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GRLRLWLLLWLLRRL*PSVSVFRTPWAWPW
Trigger: CCAGGGCCAGGCCCAGGGGGTCCTGAAGACAGAGACGGAAGGCAACAGCCGCCGCAGCAGCCACAGCAGCAGCCACAGCCGCAGGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 72 bp CCCCCTGGTCCTGGCGGTGGGCCTCTGTGCATCATGTaGGGTGGCATGGGACGGGGCGGCATCAAAGGGAAC +
Preference number: 6 (lower is better)
Translates to: PPGPGGGPLCIM*GGMGRGGIKGN
Trigger: GTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS GCA 72 bp ATCGCAAAGCCCCCTGGTCCTGGCGGTGGGCCTCTGTaGATCATGTGCGGTGGCATGGGACGGGGCGGCATC +
Preference number: 6 (lower is better)
Translates to: IAKPPGPGGGPL*IMCGGMGRGGI
Trigger: GATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TGGTCCTGGCGGTGGGCCTCTGTGCATCATGTGCGGTaGCATGGGACGGGGCGGCATCAAAGGGAACCGCTG +
Preference number: 6 (lower is better)
Translates to: WSWRWASVHHVR*HGTGRHQREPL
Trigger: CAGCGGTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp AGGTGGAGGCATCGCAAAGCCCCCTGGTCCTGGCGGTaGGCCTCTGTGCATCATGTGCGGTGGCATGGGACG +
Preference number: 6 (lower is better)
Translates to: RWRHRKAPWSWR*ASVHHVRWHGT
Trigger: CGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 72 bp GGAGGCGGCGGCAGCGCTGGTCTTCAACATGTCCGTTaGGTGGTGGCGGCTGCGCTCTGCGTCTCGCTGACA +
Preference number: 6 (lower is better)
Translates to: GGGGSAGLQHVR*VVAAALCVSLT
Trigger: TGTCAGCGAGACGCAGAGCGCAGCCGCCACCACCAAACGGACATGTTGAAGACCAGCGCTGCCGCCGCCTCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286835.12
ENST00000399804.5
CDS GCA 72 bp GGTGGCGGTGGGTGCAGGGGGTACTGCGGCAGCAGGTaGTGTCGTGGTGACGGCAGTGGTATCCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: GGGGCRGYCGSR*CRGDGSGILFL
Trigger: AAGAAAGAGGATACCACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTACCCCCTGCACCCACCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp CTGGCGGTGGGCCTCTGTGCATCATGTGCGGTGGCATaGGACGGGGCGGCATCAAAGGGAACCGCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: LAVGLCASCAVA*DGAASKGTAVS
Trigger: ACTTACAGCGGTTCCCTTTGATGCCGCCCCGTCCCATGCCACCGCACATGATGCACAGAGGCCCACCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TCCATGAGGTGGAGGCATCGCAAAGCCCCCTGGTCCTaGCGGTGGGCCTCTGTGCATCATGTGCGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: SMRWRHRKAPWS*RWASVHHVRWH
Trigger: ATGCCACCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp GCCATGCGGTGGGAAGGGACCTTTCATTCCATGAGGTaGAGGCATCGCAAAGCCCCCTGGTCCTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: AMRWEGTFHSMR*RHRKAPWSWRW
Trigger: CCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCCCTTCCCACCGCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS TCA 72 bp AAGGGGCCATGCGGTGGGAAGGGACCTTTCATTCCATaGGGTGGAGGCATCGCAAAGCCCCCTGGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: KGPCGGKGPFIP*GGGIAKPPGPG
Trigger: GCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp CGTGAAAGCAGGCGGCTGGAGAGCACCAACTACAGGTaGACCCGGTTGATGTGGTGGGACCTGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RESRRLESTNYR*TRLMWWDLWRW
Trigger: CCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 72 bp GAGACCGGGCCGGGCGCCAAGAAGACCAGTAGATGGTaGCTGAAGTCCAATTACAGGACCAGGGGCAACTCC +
Preference number: 6 (lower is better)
Translates to: ETGPGAKKTSRW*LKSNYRTRGNS
Trigger: GGAGTTGCCCCTGGTCCTGTAATTGGACTTCAGGCACCATCTACTGGTCTTCTTGGCGCCCGGCCCGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TGCCAAGAAGTGAAACAGGCTGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAGCAGGTGGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: CQEVKQAGLQEG*ADSWVQQVARQ
Trigger: CTGCCGTGCCACCTGCTGCACCCACGAATCTGCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TTTCATTCCATGAGGTGGAGGCATCGCAAAGCCCCCTaGTCCTGGCGGTGGGCCTCTGTGCATCATGTGCGG +
Preference number: 6 (lower is better)
Translates to: FHSMRWRHRKAP*SWRWASVHHVR
Trigger: CCGCACATGATGCACAGAGGCCCACCGCCAGGACCAGGGGGCTTTGCGATGCCTCCACCTCATGGAATGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 90 bp CGTGAAAGCAGGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTaGATGTGGTGGGACCTGTGGAGGTGGCACTGTTATAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RESRRLESTNYRWTR*MWWDLWRWHCYRCR
Trigger: CCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCTGCTTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 72 bp GGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTTaGTGTGGTGGGACCTGTGGAGGTGGCACTGTTATA +
Preference number: 6 (lower is better)
Translates to: GGWRAPTTGGPG*CGGTCGGGTVI
Trigger: TATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp TACAGGAGGGGTGGGCAGATTCGTGGGTGCAGCAGGTaGCACGGCAGAGCCATACATTTTCACGCTGTCACC +
Preference number: 6 (lower is better)
Translates to: YRRGGQIRGCSR*HGRAIHFHAVT
Trigger: GGTGACAGCGTGAAAATGTATGGCTCTGCCGTGCCACCTGCTGCACCCACGAATCTGCCCACCCCTCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp GATGAGACCGGGCCGGGCGCCAAGAAGACCAGTAGATaGTGCCTGAAGTCCAATTACAGGACCAGGGGCAAC +
Preference number: 6 (lower is better)
Translates to: DETGPGAKKTSR*CLKSNYRTRGN
Trigger: GTTGCCCCTGGTCCTGTAATTGGACTTCAGGCACCATCTACTGGTCTTCTTGGCGCCCGGCCCGGTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TACCAAGAAGTGAAACAGGCTGGGTTACAGGAGGGGTaGGCAGATTCGTGGGTGCAGCAGGTGGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: YQEVKQAGLQEG*ADSWVQQVARQ
Trigger: CTGCCGTGCCACCTGCTGCACCCACGAATCTGCCCACCCCTCCTGTAACCCAGCCTGTTTCACTTCTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467731.1
CDS CAA 72 bp ATATCCATAAGCGAAAAGAGCTCCTGGTTGAAGGCGTaGACGGCGTCCATGTTCGCGCTGCGGCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: ISISEKSSWLKA*TASMFALRRRL
Trigger: CAGCCGCCGCCGCAGCGCGAACATGGACGCCGTCAACGCCTTCAACCAGGAGCTCTTTTCGCTTATGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS CAA 72 bp AGGCGGCTGGAGAGCACCAACTACAGGTGGACCCGGTaGATGTGGTGGGACCTGTGGAGGTGGCACTGTTAT +
Preference number: 6 (lower is better)
Translates to: RRLESTNYRWTR*MWWDLWRWHCY
Trigger: ATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTCCAGCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp GAGATCGAGATCGGGGAGAATGTCGGCGTCTATCCCTaGACCGAGATCGAGAACGTCGATGCCGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: EIEIGENVGVYP*TEIENVDAETF
Trigger: GAAGGTCTCGGCATCGACGTTCTCGATCTCGGTCCAGGGATAGACGCCGACATTCTCCCCGATCTCGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp GAGAGCACCAACTACAGGTGGACCCGGTTGATGTGGTaGGACCTGTGGAGGTGGCACTGTTATAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: ESTNYRWTRLMW*DLWRWHCYRCR
Trigger: CCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCTGTAGTTGGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 72 bp GTGCAGGGGGTACTGCGGCAGCAGGTGCTGTCGTGGTaGCGGCAGTGGTATCCTCTTTCTTTGATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: VQGVLRQQVLSW*RQWYPLSLILP
Trigger: TGGAAGAATCAAAGAAAGAGGATACCACTGCCGTCACCACGACAGCACCTGCTGCCGCAGTACCCCCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 72 bp CCACTAGAGCGTCTATTTCTCTCTTCCAAGTCTCTGTaGCTGTCCCGGTCAGGGCTCCTCCTTCCCCACTCT +
Preference number: 6 (lower is better)
Translates to: PLERLFLSSKSL*LSRSGLLLPHS
Trigger: AGAGTGGGGAAGGAGGAGCCCTGACCGGGACAGGCACAGAGACTTGGAAGAGAGAAATAGACGCTCTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp AGGTGGACCCGGTTGATGTGGTGGGACCTGTGGAGGTaGCACTGTTATAGGTGCAGGAACAGGAATAGGAGG +
Preference number: 6 (lower is better)
Translates to: RWTRLMWWDLWR*HCYRCRNRNRR
Trigger: CCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCACCTCCACAGGTCCCACCACATCAACCGGGTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp TGGCATTCCACCAGGCCTAACAAAGGGGCCATGCGGTaGGAAGGGACCTTTCATTCCATGAGGTGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: WHSTRPNKGAMR*EGTFHSMRWRH
Trigger: ATGCCTCCACCTCATGGAATGAAAGGTCCCTTCCCACCGCATGGCCCCTTTGTTAGGCCTGGTGGAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp AGCCACAGCAGCAAAAGCATCAGAGCTGGGCAACTGTaGTACAGCTGGGACGGAGTTTGGAGTGGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: SHSSKSIRAGQL*YSWDGVWSGLC
Trigger: ACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTTGCTGCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS GCA 72 bp CGGCGTCTATCCCTGGACCGAGATCGAGAACGTCGATaGCGAGACCTTCGAGATCTAGAACCAGATCTAGAT +
Preference number: 6 (lower is better)
Translates to: RRLSLDRDRERR*RDLRDLEPDLD
Trigger: ATCTAGATCTGGTTCTAGATCTCGAAGGTCTCGGCATCGACGTTCTCGATCTCGGTCCAGGGATAGACGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CCA 72 bp TTGTGCCTGAAAAGAAGCTTGGAAAGGCTGCTGCACTaGTGGAGTTGGAGGAATCACAGGCTGAGCCATGGG +
Preference number: 6 (lower is better)
Translates to: LCLKRSLERLLH*WSWRNHRLSHG
Trigger: CCCATGGCTCAGCCTGTGATTCCTCCAACTCCACCAGTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp CCAGGAGGCAGAAAACCTGGTGGTAAATGCATTGGGTaGAATCCTGGGCGCAAAAATGGTGGAGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: PGGRKPGGKCIG*NPGRKNGGGGG
Trigger: CCCTCCTCCTCCACCATTTTTGCGCCCAGGATTCAACCCAATGCATTTACCACCAGGTTTTCTGCCTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp CAAAAGCATCAGAGCTGGGCAACTGTGGTACAGCTGGGACGGAGTTaGGAGTGGCTTGTGTGGGAGGTTCAGAAGAAACTTTTACTGGAG +
Preference number: 6 (lower is better)
Translates to: QKHQSWATVVQLGRS*EWLVWEVQKKLLLE
Trigger: CTCCAGTAAAAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTGCCCAGCTCTGATGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS TCA 72 bp CGACGTTCTCTCTCTTTTTCTCGATCCCGTCTTTCTTaGGATCGAGATCGGGGAGAATGTCGGCGTCTATCC +
Preference number: 6 (lower is better)
Translates to: RRSLSFSRSRLS*DRDRGECRRLS
Trigger: GGATAGACGCCGACATTCTCCCCGATCTCGATCTCAAGAAAGACGGGATCGAGAAAAAGAGAGAGAACGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 72 bp CCATATTTTGATGCTGTGTGTATGCTGGCTGCTGCATaGCATCTCCAGGAAAGCCAAATGGTGCCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: PYFDAVCMLAAA*HLQESQMVPVE
Trigger: CTCCACAGGCACCATTTGGCTTTCCTGGAGATGGCATGCAGCAGCCAGCATACACACAGCATCAAAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 72 bp TTGGCTAATGGGAGGTTCAACGGTTTTGTTACCACCTaGCCTGTCTGTCACCTCAGGCTTTTCCTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: LANGRFNGFVTT*PVCHLRLFLSS
Trigger: CGAGGAAAGGAAAAGCCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCCCATTAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 72 bp CAACTGTGGTACAGCTGGGACGGAGTTTGGAGTGGCTaGTGTGGGAGGTTCAGAAGAAACTTTTACTGGAGG +
Preference number: 6 (lower is better)
Translates to: QLWYSWDGVWSG*CGRFRRNFYWR
Trigger: CCTCCAGTAAAAGTTTCTTCTGAACCTCCCACACAAGCCACTCCAAACTCCGTCCCAGCTGTACCACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS CCA 72 bp CTGAGCCATCACAGCATTGTCAAGGGCAGGAGACTGTaGTTTTGGAGGCTGTTGAAAAGTCTGAAGGATCTG +
Preference number: 6 (lower is better)
Translates to: LSHHSIVKGRRL*FWRLLKSLKDL
Trigger: CAGATCCTTCAGACTTTTCAACAGCCTCCAAAACCACAGTCTCCTGCCCTTGACAATGCTGTGATGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
ENST00000485790.1
CDS CAA 72 bp TCGACGTTCTCTCTCTTTTTCTCGATCCCGTCTTTCTaGAGATCGAGATCGGGGAGAATGTCGGCGTCTATC +
Preference number: 6 (lower is better)
Translates to: STFSLFFSIPSF*RSRSGRMSASI
Trigger: GATAGACGCCGACATTCTCCCCGATCTCGATCTCAAGAAAGACGGGATCGAGAAAAAGAGAGAGAACGTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp ACATTTCCCACTTGGCTAATGGGAGGTTCAACGGTTTaGTTACCACCTGCCCTGTCTGTCACCTCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: TFPTWLMGGSTV*LPPALSVTSGF
Trigger: AAAGCCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCCCATTAGCCAAGTGGGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 90 bp CATGGGAGGAAATGGAGGTGTAGGAAGAAGTCCAAATCCTGGCATTaGTCCATTAGGAGGAAGTGGAACCTGATGGTGCATTGGATCCTG +
Preference number: 6 (lower is better)
Translates to: HGRKWRCRKKSKSWH*SIRRKWNLMVHWIL
Trigger: CAGGATCCAATGCACCATCAGGTTCCACTTCCTCCTAATGGACAAATGCCAGGATTTGGACTTCTTCCTACACCTCCATTTCCTCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp CACCCAGAGGGTAGTACTGCAAACACTTGCAGTTTCCGGTTTCACTaGAGGGAGGCCTTTTTGTCGACGTTCTCTCTCTTTTTCTCGATC +
Preference number: 6 (lower is better)
Translates to: HPEGSTANTCSFRFH*REAFLSTFSLFFSI
Trigger: GATCGAGAAAAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACTACCCTCTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 72 bp CCAGACACCAAGTTTGGGATGCTTATTGGTGGAGTGTaGGGAGGAGGAATGGATACTGGTGGAGTTATAGGA +
Preference number: 6 (lower is better)
Translates to: PDTKFGMLIGGV*GGGMDTGGVIG
Trigger: TCCTATAACTCCACCAGTATCCATTCCTCCTCCTCACACTCCACCAATAAGCATCCCAAACTTGGTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399804.5
CDS CAA 72 bp TTCCTGCTGATGCGGCTTCTGTGTAAGTGGTTCATTTaGTGCCTGAAAAGAAGCTTGGAAAGGCTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: FLLMRLLCKWFI*CLKRSLERLLH
Trigger: GTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTTACACAGAAGCCGCATCAGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp ACTTGCAGTTTCCGGTTTCACTTGAGGGAGGCCTTTTaGTCGACGTTCTCTCTCTTTTTCTCGATCCCGTCT +
Preference number: 6 (lower is better)
Translates to: TCSFRFHLREAF*STFSLFFSIPS
Trigger: AGACGGGATCGAGAAAAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp TACTTCCATTTCCTGCTGATGCGGCTTCTGTGTAAGTGGTTCATTTaGTGCCTGAAAAGAAGCTTGGAAAGGCTGCTGCACTGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: YFHFLLMRLLCKWFI*CLKRSLERLLHWWS
Trigger: ACTCCACCAGTGCAGCAGCCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp ACTGCAAACACTTGCAGTTTCCGGTTTCACTTGAGGGAGGCCTTTTaGTCGACGTTCTCTCTCTTTTTCTCGATCCCGTCTTTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: TANTCSFRFHLREAF*STFSLFFSIPSFLR
Trigger: TCTCAAGAAAGACGGGATCGAGAAAAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACTGCAAGTGTTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp TTTATAGTTTCCTCGGCTCAGTTTCTGCAGGGCACGATAGGCATCTaGCCTATGAACCATAACAATATAGGCACAACCCCTGGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: FIVSSAQFLQGTIGI*PMNHNNIGTTPGRN
Trigger: ATTCCTCCCAGGGGTTGTGCCTATATTGTTATGGTTCATAGGCAAGATGCCTATCGTGCCCTGCAGAAACTGAGCCGAGGAAACTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
ENST00000472318.1
CDS TCA 72 bp GCGATAGTAGAGTTTGGGATGCTTATTGGTGGAGTGTaGGGAGGAGGAATGGATACTGGTGGAGTTATAGGA +
Preference number: 6 (lower is better)
Translates to: AIVEFGMLIGGV*GGGMDTGGVIG
Trigger: TCCTATAACTCCACCAGTATCCATTCCTCCTCCTCACACTCCACCAATAAGCATCCCAAACTCTACTATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp AGGAGGAAGTGGAACCTGATGGTGCATTGGATCCTGTaGTATTCCCATCATTCGTGGCTGAAACTGATCCAT +
Preference number: 6 (lower is better)
Translates to: RRKWNLMVHWIL*YSHHSWLKLIH
Trigger: ATGGATCAGTTTCAGCCACGAATGATGGGAATACAACAGGATCCAATGCACCATCAGGTTCCACTTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp GGTAGTACTGCAAACACTTGCAGTTTCCGGTTTCACTaGAGGGAGGCCTTTTTGTCGACGTTCTCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: GSTANTCSFRFH*REAFLSTFSLF
Trigger: AAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp ATCCTGTTGTATTCCCATCATTCGTGGCTGAAACTGATCCATATTTaGATGCTGTGTGTATGCTGGCTGCTGCATGCCATCTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: ILLYSHHSWLKLIHI*MLCVCWLLHAISRK
Trigger: TTTCCTGGAGATGGCATGCAGCAGCCAGCATACACACAGCATCAAAATATGGATCAGTTTCAGCCACGAATGATGGGAATACAACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 72 bp GTAGTACTGCAAACACTTGCAGTTTCCGGTTTCACTTaGGGGAGGCCTTTTTGTCGACGTTCTCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: VVLQTLAVSGFT*GRPFCRRSLSF
Trigger: AAAAGAGAGAGAACGTCGACAAAAAGGCCTCCCTCAAGTGAAACCGGAAACTGCAAGTGTTTGCAGTACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp TATTCCCATCATTCGTGGCTGAAACTGATCCATATTTaGATGCTGTGTGTATGCTGGCTGCTGCATGCCATC +
Preference number: 6 (lower is better)
Translates to: YSHHSWLKLIHI*MLCVCWLLHAI
Trigger: GATGGCATGCAGCAGCCAGCATACACACAGCATCAAAATATGGATCAGTTTCAGCCACGAATGATGGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 72 bp AAATGGAGGTGTAGGAAGAAGTCCAAATCCTGGCATTaGTCCATTAGGAGGAAGTGGAACCTGATGGTGCAT +
Preference number: 6 (lower is better)
Translates to: KWRCRKKSKSWH*SIRRKWNLMVH
Trigger: ATGCACCATCAGGTTCCACTTCCTCCTAATGGACAAATGCCAGGATTTGGACTTCTTCCTACACCTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS GCA 72 bp CTTCCAAACCTTTCTTGGTCTCTACCTGAATTGAACTaGTGCCTGTTATCATTTCTAAACTGCTGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LPNLSWSLPELN*CLLSFLNCCGC
Trigger: GCAGCCACAGCAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp TACTTCCATTTCCTGCTGATGCGGCTTCTGTGTAAGTaGTTCATTTTGTGCCTGAAAAGAAGCTTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: YFHFLLMRLLCK*FILCLKRSLER
Trigger: CCTTTCCAAGCTTCTTTTCAGGCACAAAATGAACCACTTACACAGAAGCCGCATCAGCAGGAAATGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS CAA 90 bp TTTCCAAAAGATCTTCTTCCAAACCTTTCTTGGTCTCTACCTGAATaGAACTGCTGCCTGTTATCATTTCTAAACTGCTGTGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FPKDLLPNLSWSLPE*NCCLLSFLNCCGCC
Trigger: GCAGCAGCCACAGCAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CCA 72 bp ATGGTGCATTGGATCCTGTTGTATTCCCATCATTCGTaGCTGAAACTGATCCATATTTTGATGCTGTGTGTA +
Preference number: 6 (lower is better)
Translates to: MVHWILLYSHHS*LKLIHILMLCV
Trigger: TACACACAGCATCAAAATATGGATCAGTTTCAGCCACGAATGATGGGAATACAACAGGATCCAATGCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000467731.1
CDS TCA 72 bp GTATCTCCTAAAAGCTGGGAAGAGACTAAGGTTAAGTaGATTACGAACTCTGTACCAATTCCTTTGCACAGA +
Preference number: 6 (lower is better)
Translates to: VSPKSWEETKVK*ITNSVPIPLHR
Trigger: TCTGTGCAAAGGAATTGGTACAGAGTTCGTAATTCACTTAACCTTAGTCTCTTCCCAGCTTTTAGGAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467731.1
CDS CCA 72 bp ACCCTATTTCCAAAAGATCTTCTTCCAAACCTTTCTTaGTCTCTACCTGAATTGAACTGCTGCCTGTTATCA +
Preference number: 6 (lower is better)
Translates to: TLFPKDLLPNLS*SLPELNCCLLS
Trigger: TGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTTGGAAATAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 72 bp GATCTTCTTCCAAACCTTTCTTGGTCTCTACCTGAATaGAACTGCTGCCTGTTATCATTTCTAAACTGCTGT +
Preference number: 6 (lower is better)
Translates to: DLLPNLSWSLPE*NCCLLSFLNCC
Trigger: ACAGCAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 72 bp ATAGCTTTAATAGCAGCTTTAGTGATGAGAATCATCTaGGCTCTAGAGATGGGAGGTTTCATATCCATAAGC +
Preference number: 6 (lower is better)
Translates to: IALIAALVMRII*ALEMGGFISIS
Trigger: GCTTATGGATATGAAACCTCCCATCTCTAGAGCCAAGATGATTCTCATCACTAAAGCTGCTATTAAAGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
ENST00000485790.1
CDS TCA 72 bp AAAAGATCTTCTTCCAAACCTTTCTTGGTCTCTACCTaGATTGAACTGCTGCCTGTTATCATTTCTAAACTG +
Preference number: 6 (lower is better)
Translates to: KRSSSKPFLVST*IELLPVIISKL
Trigger: CAGTTTAGAAATGATAACAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286835.12
ENST00000399804.5
ENST00000434667.3
CDS CAA 90 bp CACCTAAATTCTAGTCACATCTATAAACCTGGGCAAATTGTAACTTaGGTCTCAGGTCCTCCATTTCATAAAATGACATTAATCACACCT +
Preference number: 6 (lower is better)
Translates to: HLNSSHIYKPGQIVT*VSGPPFHKMTLITP
Trigger: AGGTGTGATTAATGTCATTTTATGAAATGGAGGACCTGAGACCAAAGTTACAATTTGCCCAGGTTTATAGATGTGACTAGAATTTAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472318.1
CDS TCA 72 bp TCATTTCTAAGTTGGCAATTCAAGTTTGGTCTCAACTaGGTCCTCCAAGCTTTGTTATATAAAGACTTACCT +
Preference number: 6 (lower is better)
Translates to: SFLSWQFKFGLN*VLQALLYKDLP
Trigger: AGGTAAGTCTTTATATAACAAAGCTTGGAGGACTCAGTTGAGACCAAACTTGAATTGCCAACTTAGAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472318.1
CDS TCA 72 bp GATACAGAAGTGATAATTTCCATAACTCAAGTTGAGTaGTATAAATGGTGGGGTGGGTTATGTGAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: DTEVIISITQVE*YKWWGGLCERN
Trigger: ATTTCTCTCACATAACCCACCCCACCATTTATATCACTCAACTTGAGTTATGGAAATTATCACTTCTGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485790.1