RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAF11 (Homo sapiens)

Ensembl gene IDs: ENSG00000139218

Ensembl transcript IDs: ENST00000266589.10, ENST00000369367.8, ENST00000395453.2, ENST00000395454.6, ENST00000465950.5, ENST00000484275.1, ENST00000547018.5, ENST00000547654.5, ENST00000547950.1, ENST00000549162.5, ENST00000550629.1, ENST00000550893.2, ENST00000551391.1

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACACCCGGCCCAGACTGGCCTAATTTTAAGGAACTCCCAAGGATaGCTCACTCTTATATCCAGCAGATATCTATCCAGAAAGGTCTCA +
Preference number: 1 (lower is better)
Translates to: PHPAQTGLILRNSQG*LTLISSRYLSRKVS
Trigger: TGAGACCTTTCTGGATAGATATCTGCTGGATATAAGAGTGAGGCATCCTTGGGAGTTCCTTAAAATTAGGCCAGTCTGGGCCGGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
3UTR CCA 90 bp AGACAGCACTCCAACTTCATAATACAAACAATATCTCATGGACCCTaGGGCAATCACTGTGCTTCTGAAGCTACATCTTTTGGATGGAAC +
Preference number: 1 (lower is better)
Translates to: RQHSNFIIQTISHGP*GNHCASEATSFGWN
Trigger: GTTCCATCCAAAAGATGTAGCTTCAGAAGCACAGTGATTGCCCCAGGGTCCATGAGATATTGTTTGTATTATGAAGTTGGAGTGCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR CCA 90 bp TCTGAAGAACTTTCCAGGTACTTGGTATGTACTGAAAATTCTTACTaGAATCAGTTTATCATGGAGAAAACCTACTGTTCTTTCAAGATG +
Preference number: 1 (lower is better)
Translates to: SEELSRYLVCTENSY*NQFIMEKTYCSFKM
Trigger: CATCTTGAAAGAACAGTAGGTTTTCTCCATGATAAACTGATTCCAGTAAGAATTTTCAGTACATACCAAGTACCTGGAAAGTTCTTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCTGGTCTCGAACTCCTaGCCTCAGGTGATCCGCCAC +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYLVSNS*PQVIRH
Trigger: GTGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCAGGCTGGAGTGCAATaGCATGGTCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYQAGVQ*HGLGSL
Trigger: CAGTGAGCCGAGACCATGCCATTGCACTCCAGCCTG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR CAA 90 bp CTCATGGACCCTGGGGCAATCACTGTGCTTCTGAAGCTACATCTTTaGGATGGAACATTCCAGCAGTACACACTGTGGCCATTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: LMDPGAITVLLKLHL*DGTFQQYTLWPFKG
Trigger: TCCTTTAAATGGCCACAGTGTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAGAAGCACAGTGATTGCCCCAGGGTCCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR TCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACCTCCCGGGTTCAACTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSPPGFN*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCAGTTGAACCCGGGAGG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCAAATCCCTAATCCCTaGAAGGCTAACCAGGACTCC +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYQIPNP*KANQDS
Trigger: GGAGTCCTGGTTAGCCTTTCAGGGATTAGGGATTTG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGTCAGTTTATCTCACTaGGGCATGTATCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRVSLSH*GMYLLG
Trigger: TCCAAGGAGATACATGCCTCAGTGAGATAAACTGAC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR GCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTACTGTCTAGAATTTTaGAACATGGCTAATGGCTAC +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYYCLEF*NMANGY
Trigger: GTAGCCATTAGCCATGTTGCAAAATTCTAGACAGTA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAGCCCCAAATCAGACATaGAACACACACTTGTTACTG +
Preference number: 2 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSAPNQT*NTHLLL
Trigger: CAGTAACAAGTGTGTGTTCCATGTCTGATTTGGGGC...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGGAATCAGTTTATCATaGAGAAAACCTACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYGISLS*RKPTVL
Trigger: AAGAACAGTAGGTTTTCTCCATGATAAACTGATTCC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTACAGAGTATTGCTCTaGCTAAATAGTTTAGCTAGT +
Preference number: 2 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYYRVLL*LNSLAS
Trigger: ACTAGCTAAACTATTTAGCCAGAGCAATACTCTGTA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTGGTCATACAATAGGTaGAGAGTGTCTCAATGTTTT +
Preference number: 2 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRWSYNR*RVSQCF
Trigger: AAAACATTGAGACACTCTTCACCTATTGTATGACCA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAACAACTAAGGAGGTGTaGCTTGATATTCTGAAACAC +
Preference number: 2 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSTTKEV*LDILKH
Trigger: GTGTTTCAGAATATCAAGGCACACCTCCTTAGTTGT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGAAGGATACAGAAGTTaGAGTGCAGACCTATATTTA +
Preference number: 2 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNEGYRS*SADLYL
Trigger: TAAATATAGGTCTGCACTGCAACTTCTGTATCCTTC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
3UTR-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGAGGCATGTATCTCCTaGGATCTATTAACTTATCTG +
Preference number: 3 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYEACIS*DLLTYL
Trigger: CAGATAAGTTAATAGATCCAAGGAGATACATGCCTC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACCCTTTACTTTCCCTaGAATTTTGTGGGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTLYFP*NFVGEG
Trigger: ACCCTCCCCCACAAAATTCAAGGGAAAGTAAAGGGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
3UTR-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGAACTTTCCAGGTACTaGGTATGTACTGAAAATTCT +
Preference number: 3 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYELSRY*VCTENS
Trigger: AGAATTTTCAGTACATACCAAGTACCTGGAAAGTTC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR CCA 72 bp TCCAACTTCATAATACAAACAATATCTCATGGACCCTaGGGCAATCACTGTGCTTCTGAAGCTACATCTTTT +
Preference number: 3 (lower is better)
Translates to: SNFIIQTISHGP*GNHCASEATSF
Trigger: AAAAGATGTAGCTTCAGAAGCACAGTGATTGCCCCAGGGTCCATGAGATATTGTTTGTATTATGAAGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
3UTR-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGGAAGGATACAGAAGTaGCAGTGCAGACCTATATTT +
Preference number: 3 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNGRIQK*QCRPIF
Trigger: AAATATAGGTCTGCACTGCAACTTCTGTATCCTTCC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
3UTR GCA 72 bp GATTTTCAGTTAATGGTACATGTTGAAATTGCACTTTaGAGATATCCTGATAATGTCCTTGACAGCGTTCCC +
Preference number: 3 (lower is better)
Translates to: DFQLMVHVEIAL*RYPDNVLDSVP
Trigger: GGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAACATGTACCATTAACTGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
3UTR TCA 72 bp TTCCTAATGATTTCAGTAAAACACACCCTACTATTCTaGAGCATTATAAATTCTCAGCTCAGACAAACCCAC +
Preference number: 3 (lower is better)
Translates to: FLMISVKHTLLF*SIINSQLRQTH
Trigger: GTGGGTTTGTCTGAGCTGAGAATTTATAATGCTTCAGAATAGTAGGGTGTGTTTTACTGAAATCATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
3UTR CCA 72 bp CTTTCCAGGTACTTGGTATGTACTGAAAATTCTTACTaGAATCAGTTTATCATGGAGAAAACCTACTGTTCT +
Preference number: 3 (lower is better)
Translates to: LSRYLVCTENSY*NQFIMEKTYCS
Trigger: AGAACAGTAGGTTTTCTCCATGATAAACTGATTCCAGTAAGAATTTTCAGTACATACCAAGTACCTGGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCGACCCAGGTTGCGCTaGTCCGCGCGGCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHRPRLR*SARLKP
Trigger: TGGCTTAAGCCGCGCGGAGCAGCGCAACCTGGGTCG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGGGAGCGACCCAGGTTaGGCTGCTCCGCGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRGSDPG*AAPRGL
Trigger: TAAGCCGCGCGGAGCAGCGCAACCTGGGTCGCTCCC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGAGTGGCTACCTGCATaGGGGGCACTCCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYEWLPA*GALLCG
Trigger: TCCACACAGGAGTGCCCCTCATGCAGGTAGCCACTC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAGTGGCTACCTGCATaGGGGGCACTCCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHEWLPA*GALLCG
Trigger: TCCACACAGGAGTGCCCCTCATGCAGGTAGCCACTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAGGGTCTCTAGGACACTaGCTCCGCTGGCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSGSLGH*LRWLGP
Trigger: CGGACCGAGCCAGCGGAGTCAGTGTCCTAGAGACCC...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGGGGAGCGACCCAGGTTaGGCTGCTCCGCGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRGSDPG*AAPRGL
Trigger: TAAGCCGCGCGGAGCAGCGCAACCTGGGTCGCTCCC...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTGCCCAGGCTGGAGTaGAATGGCATGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLPRLE*NGMVSA
Trigger: AGCCGAGACCATGCCATTGCACTCCAGCCTGGGCAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGGCGTGAGCTACTGTaGCCGGCCATGATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHRRELL*PAMIWD
Trigger: ATCCCAGATCATGGCCGGGCACAGTAGCTCACGCCT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR TCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGGGGTCTCTAGGACACTaGCTCCGCTGGCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRGSLGH*LRWLGP
Trigger: CGGACCGAGCCAGCGGAGTCAGTGTCCTAGAGACCC...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAGGGGGACCTAGAATaGGATCTGGACCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHEGDLE*DLDLDH
Trigger: GTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGCGACCCAGGTTGCGCTaGTCCGCGCGGCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRRPRLR*SARLKP
Trigger: TGGCTTAAGCCGCGCGGAGCAGCGCAACCTGGGTCG...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTGCCTCTGCCACGGTTaGCTCTGCCTCTACCACGGT +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRCLCHG*LCLYHG
Trigger: ACCGTGGTAGAGGCAGAGGCAACCGTGGCAGAGGCA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTTCTGTAAGTGCCTCTaGCACGGTTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYFCKCL*HGCLCL
Trigger: GAGGCAGAGGCAACCGTGGCAGAGGCACTTACAGAA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCACGGCCCAGCTGGATaGAGATGTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHHGPAG*RCPSRS
Trigger: AGATCTGGATGGACATCTGCATCCAGCTGGGCCGTG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCGTATTTCCTGGGGCTaGTGTCGGAGCAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHRISWG*CRSRQN
Trigger: GTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCTGGTCTCGAACTCCTaGGCTCAAAGCGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFLVSNS*AQSDWP
Trigger: GGGCCAATCGCTTTGAGCTCAGGAGTTCGAGACCAG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTGTCTTCGAGCTATCTaGGCTGGCTTCCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHCLRAI*AGFHCN
Trigger: GTTGCAGTGGAAGCCAGCGCAGATAGCTCGAAGACA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCTGGGAGATGGAGACTaGGGCCGCTTCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYLGDGD*GRFFSC
Trigger: ACAAGAAAAGAAGCGGCCCCAGTCTCCATCTCCCAG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGAGGGGGACCTAGAATaGGATCTGGACCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPREGDLE*DLDLDH
Trigger: GTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCCAGAACTTGGTCCCTaGACCATTCCCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHPELGP*TIPVFP
Trigger: AGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCTGGTCTCGAACTCCTaGCCTCAGGTGATCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSLVSNS*PQVIRH
Trigger: GTGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCCTCCCGGGTTCAACTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSPPGFN*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCAGTTGAACCCGGGAGG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCAAATCCCTAATCCCTaGAAGGCTAACCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHQIPNP*KANQDS
Trigger: GGAGTCCTGGTTAGCCTTTCAGGGATTAGGGATTTG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCTGGTCTCAAACTCCTaGGTTCAAGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLVSNS*VQVICL
Trigger: CAGGCAGATCACTTGAACTCAGGAGTTTGAGACCAG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGCCTCTGCCACGGTTaGCTCTGCCTCTACCACGGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSCLCHG*LCLYHG
Trigger: ACCGTGGTAGAGGCAGAGGCAACCGTGGCAGAGGCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGTAGGAGTGGCTACCTaGATGAGGGGCACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNVGVAT*MRGTPV
Trigger: CACAGGAGTGCCCCTCATGCAGGTAGCCACTCCTAC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCGGCATCACGGCTCACTaGAACCTCAACCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFGITAH*NLNLLG
Trigger: ACCTAGGAGGTTGAGGTTGCAGTGAGCCGTGATGCC...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGAGGGTCTCACCCTCTTaGCCAGGCTGTAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRRVSPS*PGCSAA
Trigger: CGCTGCACTACAGCCTGGGCAAGAGGGTGAGACCCT...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCTCGGCCTCCCAAACTaGTGGGAATACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLGLPN*WEYRRE
Trigger: CTCACGCCTGTATTCCCAGCAGTTTGGGAGGCCGAG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTCGAGCTATCTGCGCTaGCTTCCACTGCAACACTTA +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYSSYLR*LPLQHL
Trigger: TAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTCGAGCTATCTGCGCTaGCTTCCACTGCAACACTTA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSSYLR*LPLQHL
Trigger: TAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGACGGTCAATAGGACATaGAGCCAGTGTCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRTVNRT*SQCLCP
Trigger: TGGGCAGAGACACTGGCTTCATGTCCTATTGACCGT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACACATGCCCAAGCAATTaGACCTCTGGGCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYTCPSN*TSGLLT
Trigger: TGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGT...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGGTGGTGGTAGTCCCTaGGATACACTGGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNGGGSP*DTLVGV
Trigger: CACTCCTACCAGTGTATCTCAGGGACTACCACCACC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCCATCACACCTGCTCTaGGCCATTCCATTTGATCCG +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFPSHLL*AIPFDP
Trigger: CGGATCAAATGGAATGGCTCAGAGCAGGTGTGATGG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACACGGCCCAGCTGGATaGAGATGTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSHGPAG*RCPSRS
Trigger: AGATCTGGATGGACATCTGCATCCAGCTGGGCCGTG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGTAGGAGTGGCTACCTaGATGAGGGGCACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSVGVAT*MRGTPV
Trigger: CACAGGAGTGCCCCTCATGCAGGTAGCCACTCCTAC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACGTATTTCCTGGGGCTaGTGTCGGAGCAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSRISWG*CRSRQN
Trigger: GTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTGCGCTGGCTTCCACTaGAACACTTACTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYCAGFH*NTYFAF
Trigger: GAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTGCGCTGGCTTCCACTaGAACACTTACTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHCAGFH*NTYFAF
Trigger: GAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTCACCCAGGCTGGAGTaGAATGGCGTGATCACTGGA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNSPRLE*NGVITG
Trigger: TCCAGTGATCACGCCATTGCACTCCAGCCTGGGTGA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR CCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCCTTCGTCCGCTTTGTaGTGTTACAGGGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFPSSAL*CYRVSR
Trigger: CCTAGAGACCCTGTAACACCACAAAGCGGACGAAGG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTCTCACGGCCCAGCTaGATGCAGATGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNFSRPS*MQMSIQ
Trigger: CTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCCTAGGTTCAAGCGATaGCCTCACCTCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFPRFKR*PHLSFP
Trigger: TGGGAAACTGAGGTGAGGCCATCGCTTGAACCTAGG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGCACAGGAAGATCTTaGGCACAAGACTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSTGRS*AQDSED
Trigger: ATCTTCTGAGTCTTGTGCTCAAGATCTTCCTGTGCT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGTGTCTTTGTTGGGTaGCCAAGTTGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSVFVG*PSCRWR
Trigger: TCTCCATCTACAACTTGGTCACCCAACAAAGACACT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GTTCTGAGGACTATTTTCCAGCCTGAAGTGTTACTGATGAGAACTCTGACACAACAATGTACAGAGTTCTaGGGACTATTTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLRTIFQPEVLLMRTLTQQCTEF*GLFSSL
Trigger: CAGGCTGGAAAATAGTCCTCAGAACTCTGTACATTG...TTGTGTCAGAGTTCTCATCAGTAACACTTCAGGCTGGAAAATAGTCCTCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551391.1
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTCTGTAAGTGCCTCTaGCACGGTTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSFCKCL*HGCLCL
Trigger: GAGGCAGAGGCAACCGTGGCAGAGGCACTTACAGAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGACCTGAAGAATTTCTaGCTCGTCGTGAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHDLKNF*LVVSSS
Trigger: ACTACTACTCACGACGAGGCAGAAATTCTTCAGGTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACCTTCGTCCGCTTTGTaGTGTTACAGGGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSPSSAL*CYRVSR
Trigger: CCTAGAGACCCTGTAACACCACAAAGCGGACGAAGG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATATCTCTGAGACTGACTaGCTGTTTCAGCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHISETD*LFQLLC
Trigger: ACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGAT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTGGATTACTGTTACCTaGGGCATCACACCCAGAATT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHWITVT*GITPRI
Trigger: AATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTCTCACGGCCCAGCTaGATGCAGATGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSFSRPS*MQMSIQ
Trigger: CTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGCCCCAAATCAGACATaGAACACACACTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYAPNQT*NTHLLL
Trigger: CAGTAACAAGTGTGTGTTCCATGTCTGATTTGGGGC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCAGGCTGGAGTGCAATaGCGTGATCACTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNQAGVQ*RDHWSN
Trigger: ATTGCTCCAGTGATCACGCCATTGCACTCCAGCCTG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGACTGGTTTTCTACATaGGTCTGCACAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYDWFST*VCTVQM
Trigger: CATTTGTACTGTGCAGACTCATGTAGAAAACCAGTC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTTCCGGCCTCTGGCTaGCTCATTCTTAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSFPASG*LILRRW
Trigger: CCATCTCCTAAGAATGAGTCAGCCAGAGGCCGGAAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCCAGAACTTGGTCCCTaGACCATTCCCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNPELGP*TIPVFP
Trigger: AGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAACTACTTCTGTAAGTaGCTCTGCCACGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNNYFCK*LCHGCL
Trigger: GAGGCAACCGTGGCAGAGGCACTTACAGAAGTAGTT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCATAGGCTGGTGTTGTaGATTCATTTGTTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHHRLVL*IHLLLH
Trigger: ATGCAGCAACAAATGAATGCACAACACCAGCCTATG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAACTAGGAATACCCTaGAATTGCTTTCCATCTGGT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHELGIP*NCFPSG
Trigger: ACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCTTTCTCGCTTCCTCCTaGTGCTCTATCCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFFLASS*CSILNH
Trigger: GTGATTGAGGATAGAGCAGCAGGAGGAAGCGAGAAA...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCTGGGAGATGGAGACTaGGGCCGCTTCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSLGDGD*GRFFSC
Trigger: ACAAGAAAAGAAGCGGCCCCAGTCTCCATCTCCCAG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAACACCCACTGGATATaGGAAGATATTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHNTHWI*EDIHRL
Trigger: CAGCCTATGAATATCTTCCCATATCCAGTGGGTGTT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCGGAGCAGGCAAAACTaGTGTACTCATGTTATTACT +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYRSRQN*CTHVIT
Trigger: AGTAATAACATGAGTACACCAGTTTTGCCTGCTCCG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGCTACATCTTTTGGATaGAACATTCCAGCAGTACAC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHATSFG*NIPAVH
Trigger: GTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGACACCCAGAATTGTCTaGTATTGGGGATCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRTPRIV*YWGSLR
Trigger: TCTCAGAGATCCCCAATATCAGACAATTCTGGGTGT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTGGTCACTGCAAAATaGATCACACTCCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLVTAK*ITLHRY
Trigger: ATACCTATGGAGTGTGATTCATTTTGCAGTGACCAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTTGGAGACCGAGACTaGGATTGCCTCCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNFGDRD*DCLLSL
Trigger: AAGAGAAAGGAGGCAATCTCAGTCTCGGTCTCCAAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGGCTCAGGCTTCATCTTaGACTCCTGTGCTCAAACGA +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRAQASS*TPVLKR
Trigger: TCGTTTGAGCACAGGAGTTCAAGATGAAGCCTGAGC...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTGGATATGAAAGCCTaGAACAGAAAGGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLDMKA*NRKETS
Trigger: AGAAGTCTCCTTTCTGTTTCAGGCTTTCATATCCAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR GCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGTAGTTTTGTACATCTaGTGGCAAAGTCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYVVLYI*WQSLSH
Trigger: GTGAGAAAGACTTTGCCAGCAGATGTACAAAACTAC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATACAACTTTACGCCAGTaGCATGAGTCTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHTTLRQ*HESCNS
Trigger: AGAATTACAAGACTCATGGCACTGGCGTAAAGTTGT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCAGGGTCTCACTATGTTaGTCAGGCTTCATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFRVSLC*SGFILN
Trigger: GTTCAAGATGAAGCCTGAGCAACATAGTGAGACCCT...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGGCATGCACTACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHRHALP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTAGTGCATGCCT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTCGTCTTGATCCTCTaGTATTTGATGTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHFVLIL*YLMYQK
Trigger: CTTCTGGTACATCAAATACCAGAGGATCAAGACGAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCTGTCTACATCTGGTTaGTGCTCTTTTTCTAACACA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLSTSG*CSFSNT
Trigger: TGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGTCTTGCTTTTCCAATaGATCACCTCCTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHVLLFQ*ITSFFK
Trigger: CTTGAAAAAGGAGGTGATCCATTGGAAAAGCAAGAC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAACCATCAACTTGCTaGTTTGTTTGGTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHEPSTC*FVWSFR
Trigger: CCTAAAAGACCAAACAAACCAGCAAGTTGATGGTTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGCATGAACACCCACTaGATATGGGAAGATATTCAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSMNTH*IWEDIH
Trigger: ATGAATATCTTCCCATATCCAGTGGGTGTTCATGCT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGACACCCGGCCCAGACTaGCCTAATTTTAAGGAACTC +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRTPGPD*PNFKEL
Trigger: GAGTTCCTTAAAATTAGGCCAGTCTGGGCCGGGTGT...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR TCA 90 bp GTTCTGAGGACTATTTTCCAGCCTGAAGTGTTACTGATGAGAACTCTGACACAACTTTTAGAATTTTCATaGCAGGAGACCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLRTIFQPEVLLMRTLTQLLEFS*QETCFS
Trigger: TGAGAAACAGGTCTCCTGTCATGAAAATTCTAAAAG...TTGTGTCAGAGTTCTCATCAGTAACACTTCAGGCTGGAAAATAGTCCTCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551391.1
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTTTCTTCCCCTTCTTaGGTATGTGCTAATGCATAT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHFSSPS*VCANAY
Trigger: ATATGCATTAGCACATACTCAAGAAGGGGAAGAAAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACATGCCCAAGCAATTaGACCTCTGGGCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTCPSN*TSGLLT
Trigger: TGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTTGGAGACCGAGACTaGGATTGCCTCCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSFGDRD*DCLLSL
Trigger: AAGAGAAAGGAGGCAATCTCAGTCTCGGTCTCCAAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGCTGTTCCACAAACTTaGAAGATTCACTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNAVPQT*KIHSLN
Trigger: GTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTCATCAAAGGAGCATaGACACCCACTGGATATGGG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSFIKGA*TPTGYG
Trigger: CCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTGGTCATACAATAGGTaGAGAGTGTCTCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHWSYNR*RVSQCF
Trigger: AAAACATTGAGACACTCTTCACCTATTGTATGACCA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACCTTCAACAAAGACTTTaGACTGCCAAAGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYLQQRL*TAKVVI
Trigger: GATTACAACTTTGGCAGTTCAAAGTCTTTGTTGAAG...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGCCAGATATCTGGTCTTaGTTTTCCAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRPDIWS*FSNGSP
Trigger: AGGTGATCCATTGGAAAAGCAAGACCAGATATCTGG...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGTGATTGAGACTTCCTaGTTTCTTTCCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRVIETS*FLSQFL
Trigger: GAGAAACTGGGAAAGAAAGCAGGAAGTCTCAATCAC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGGAATACCCTGCAATTaGTTTCCATCTGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRGIPCN*FPSGCE
Trigger: TTCACAACCAGATGGAAAGCAATTGCAGGGTATTCC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCTGCAACACTTACTTTaGTTTCTGCCAATTTTACAG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLQHLL*FLPILQ
Trigger: CTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAAGGATACAGAAGTTaGAGTGCAGACCTATATTTA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHEGYRS*SADLYL
Trigger: TAAATATAGGTCTGCACTGCAACTTCTGTATCCTTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGCTCGCTTCCTCCTGCTaGTCTATCCTCAATCACATA +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRLASSC*SILNHI
Trigger: TATGTGATTGAGGATAGAGCAGCAGGAGGAAGCGAG...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGAGGAACTCCCAAGGATaGCTCACTCTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRRNSQG*LTLISS
Trigger: GCTGGATATAAGAGTGAGGCATCCTTGGGAGTTCCT...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGCATCTTGAACTCCTGTaGTCAAACGATCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRHLELL*SNDPPT
Trigger: GGTAGGAGGATCGTTTGAGCACAGGAGTTCAAGATG...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGAAGATTCTCCAGAGTaGCTAACAGAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYEDSPE*LTEENI
Trigger: TATGTTTTCTTCTGTTAGCCACTCTGGAGAATCTTC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCCGATCATTTCCTCGTaGACATCTCCAACCATCATT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNPIISS*TSPTII
Trigger: AATGATGGTTGGAGATGTCCACGAGGAAATGATCGG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTTAAATGGATTGCGTTaGATGTTCATCAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYLNGLR*MFIKGA
Trigger: TGCTCCTTTGATGAACATCCAACGCAATCCATTTAA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAGTATTACCAGAACTTaGTCCCTGAACCATTCCCGT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSSITRT*SLNHSR
Trigger: ACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATATCTCATGGACCCTaGGGCAATCACTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSISHGP*GNHCAS
Trigger: AGAAGCACAGTGATTGCCCCAGGGTCCATGAGATAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACACAAACAATATCTCATaGACCCTGGGGCAATCACTG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNTNNIS*TLGQSL
Trigger: CAGTGATTGCCCCAGGGTCCATGAGATATTGTTTGT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGCCCGGCCATGATCTaGGATTATCTAAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSCPAMI*DYLSKR
Trigger: CCTTTTGCTTAGATAATCCCAGATCATGGCCGGGCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACACCCAGAATTGTCTaGTATTGGGGATCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTPRIV*YWGSLR
Trigger: TCTCAGAGATCCCCAATATCAGACAATTCTGGGTGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAGCACAGGAAGATCTTaGGCACAAGACTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSTGRS*AQDSED
Trigger: ATCTTCTGAGTCTTGTGCTCAAGATCTTCCTGTGCT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGCTGTTCCACAAACTTaGAAGATTCACTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSAVPQT*KIHSLN
Trigger: GTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGATATTTATAGGTAGCTaGGAACCATCAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRIFIGS*EPSTCW
Trigger: CCAGCAAGTTGATGGTTCTCAGCTACCTATAAATAT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGTCAGTTTATCTCACTaGGGCATGTATCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSVSLSH*GMYLLG
Trigger: TCCAAGGAGATACATGCCTCAGTGAGATAAACTGAC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCCAGATATCTGGTCTTaGTTTTCCAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNPDIWS*FSNGSP
Trigger: AGGTGATCCATTGGAAAAGCAAGACCAGATATCTGG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATATTCATTTTGGTCACTaGAAAATGAATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHIHFGH*KMNHTP
Trigger: TGGAGTGTGATTCATTTTGCAGTGACCAAAATGAAT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGTGATTGAGACTTCCTaGTTTCTTTCCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNVIETS*FLSQFL
Trigger: GAGAAACTGGGAAAGAAAGCAGGAAGTCTCAATCAC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGACCTGAAGAATTTCTaGCTCGTCGTGAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSDLKNF*LVVSSS
Trigger: ACTACTACTCACGACGAGGCAGAAATTCTTCAGGTC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCATAGGCTGGTGTTGTaGATTCATTTGTTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNHRLVL*IHLLLH
Trigger: ATGCAGCAACAAATGAATGCACAACACCAGCCTATG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGTTGAAATTGCACTTTaGAGATATCCTGATAATGTC +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHVEIAL*RYPDNV
Trigger: GACATTATCAGGATATCTGCAAAGTGCAATTTCAAC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATGCAGTCTAACCAGTaGCCCAAATCAGACATGGAA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSMQSNQ*PKSDME
Trigger: TTCCATGTCTGATTTGGGGCACTGGTTAGACTGCAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCACAATTAAGACATATTaGGCATCTGTCAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFTIKTY*ASVSLT
Trigger: AGTGAGGCTGACAGATGCCCAATATGTCTTAATTGT...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTCGTCTTGATCCTCTaGTATTTGATGTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRFVLIL*YLMYQK
Trigger: CTTCTGGTACATCAAATACCAGAGGATCAAGACGAA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATCTCTGAGACTGACTaGCTGTTTCAGCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSISETD*LFQLLC
Trigger: ACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGGATTACTGTTACCTaGGGCATCACACCCAGAATT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSWITVT*GITPRI
Trigger: AATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATACAGACTTCCGTTTTaGAGCCTGTCTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSYRLPF*SLSCLL
Trigger: AAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTACAGACTTCCGTTTTaGAGCCTGTCTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNYRLPF*SLSCLL
Trigger: AAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAGTAGTATCCCTTTTTaGAGACCGAGACTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNSSIPF*RPRLRL
Trigger: CAATCTCAGTCTCGGTCTCCAAAAAGGGATACTACT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCCGATCATTTCCTCGTaGACATCTCCAACCATCATT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSPIISS*TSPTII
Trigger: AATGATGGTTGGAGATGTCCACGAGGAAATGATCGG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATGGATTTCTGGTTCTTaGATCAGGCCCAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSWISGS*IRPRVY
Trigger: ATAAACTCTGGGCCTGATCCAAGAACCAGAAATCCA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGACTTGCTGGTTTGTTTaGTCTTTTAGGCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRTCWFV*SFRLES
Trigger: GGATTCTAGCCTAAAAGACCAAACAAACCAGCAAGT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAACACCCACTGGATATaGGAAGATATTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSNTHWI*EDIHRL
Trigger: CAGCCTATGAATATCTTCCCATATCCAGTGGGTGTT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGAGCATGAACACCCACTaGATATGGGAAGATATTCAT +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRSMNTH*IWEDIH
Trigger: ATGAATATCTTCCCATATCCAGTGGGTGTTCATGCT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAGTATTACCAGAACTTaGTCCCTGAACCATTCCCGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSITRT*SLNHSR
Trigger: ACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGGAATCAGTTTATCATaGAGAAAACCTACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHGISLS*RKPTVL
Trigger: AAGAACAGTAGGTTTTCTCCATGATAAACTGATTCC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATACTTCTAAAGATCTATaGTTTGGATATGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHTSKDL*FGYESL
Trigger: CAGGCTTTCATATCCAAACCATAGATCTTTAGAAGT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR TCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGCTTTTAGAATTTTCATaGCAGGAGACCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRLLEFS*QETCFS
Trigger: TGAGAAACAGGTCTCCTGTCATGAAAATTCTAAAAG...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGACTGGTTTTCTACATaGGTCTGCACAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSDWFST*VCTVQM
Trigger: CATTTGTACTGTGCAGACTCATGTAGAAAACCAGTC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATTCTTAGGAGATGGTaGTTGAGACTTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSILRRW*LRLPAF
Trigger: GAAAGCAGGAAGTCTCAATCACCATCTCCTAAGAAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATCTTTCACTCTTGGCTaGGATCTTTTGTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSSFTLG*DLLFSL
Trigger: TAGAGAGAACAAAAGATCTCAGCCAAGAGTGAAAGA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTCTTTCACTCTTGGCTaGGATCTTTTGTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNSFTLG*DLLFSL
Trigger: TAGAGAGAACAAAAGATCTCAGCCAAGAGTGAAAGA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTGCTGGTGTATCAAATaGGAACTCCTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNCWCIK*ELLFTF
Trigger: AAAAGTGAACAGGAGTTCTCATTTGATACACCAGCA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATTTCTGCCTCGTCGTaGGTAGTAGTTTTGTACATC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSISASS*VVVLYI
Trigger: GATGTACAAAACTACTACTCACGACGAGGCAGAAAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTAGAGGCTTTGCTGTaGCTTGATGACGAAGTATTA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLEALL*LDDEVL
Trigger: TAATACTTCGTCATCAAGTCACAGCAAAGCCTCTAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTTGGCTCCCCTTCCGTaGATATTTGTATTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSLAPLP*IFVFVY
Trigger: GTAGACAAATACAAATATTCACGGAAGGGGAGCCAA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCGCATATGTTTTACTGTaGATGCTCTGTACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFAYVLL*MLCTKV
Trigger: AACCTTAGTACAGAGCATTCACAGTAAAACATATGC...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATCTACATCTGGTTGGTaGTCTTTTTCTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSSTSGW*SFSNTG
Trigger: ACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGGAATACCCTGCAATTaGTTTCCATCTGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSGIPCN*FPSGCE
Trigger: TTCACAACCAGATGGAAAGCAATTGCAGGGTATTCC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGAACTAGGAATACCCTaGAATTGCTTTCCATCTGGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSELGIP*NCFPSG
Trigger: ACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACACAACTAAGGAGGTGTaGCTTGATATTCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNTTKEV*LDILKH
Trigger: GTGTTTCAGAATATCAAGGCACACCTCCTTAGTTGT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAACAATTAAGACATATTaGGCATCTGTCAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSTIKTY*ASVSLT
Trigger: AGTGAGGCTGACAGATGCCCAATATGTCTTAATTGT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGATCTTCTCTTACGATaGCTTTTCTTCTTATACAGC +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRDLLLR*LFFLYS
Trigger: GCTGTATAAGAAGAAAAGCCATCGTAAGAGAAGATC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCTGTCTACATCTGGTTaGTGCTCTTTTTCTAACACA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLSTSG*CSFSNT
Trigger: TGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGGACAAGATACAGGTTaGTACACTTTGCTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNGQDTG*YTLLSD
Trigger: ATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAAGCAATTGAACCTCTaGGCTCTTAACAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNKQLNL*ALNRLS
Trigger: AGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAGTAGTATCCCTTTTTaGAGACCGAGACTGAGATTG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSSIPF*RPRLRL
Trigger: CAATCTCAGTCTCGGTCTCCAAAAAGGGATACTACT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGGATTTCTGGTTCTTaGATCAGGCCCAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSWISGS*IRPRVY
Trigger: ATAAACTCTGGGCCTGATCCAAGAACCAGAAATCCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCGGAGCAGGCAAAACTaGTGTACTCATGTTATTACT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSRSRQN*CTHVIT
Trigger: AGTAATAACATGAGTACACCAGTTTTGCCTGCTCCG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATTTTCTTCCCCTTCTTaGGTATGTGCTAATGCATAT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSFSSPS*VCANAY
Trigger: ATATGCATTAGCACATACTCAAGAAGGGGAAGAAAA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGCTGGTGTATCAAATaGGAACTCCTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSCWCIK*ELLFTF
Trigger: AAAAGTGAACAGGAGTTCTCATTTGATACACCAGCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATATTTATAGGTAGCTaGGAACCATCAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSIFIGS*EPSTCW
Trigger: CCAGCAAGTTGATGGTTCTCAGCTACCTATAAATAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR TCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATGGTCATACAATAGGTaGAGAGTGTCTCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSWSYNR*RVSQCF
Trigger: AAAACATTGAGACACTCTTCACCTATTGTATGACCA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTCCACAAAATGTTTCTaGTTAAGTTTGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSTKCF*LSLCPC
Trigger: GCATGGGCACAAACTTAATCAGAAACATTTTGTGGA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR TCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTCTATGGTTTGGATATaGAAGCCTGAAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSMVWI*KPETER
Trigger: CCTTTCTGTTTCAGGCTTTCATATCCAAACCATAGA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAGTTCATGTCTCTTCTaGCTAATCAATGCACTGATT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNSSCLF*LINALI
Trigger: AATCAGTGCATTGATTAGGCAGAAGAGACATGAACT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTCTACATCTGGTTGGTaGTCTTTTTCTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSTSGW*SFSNTG
Trigger: ACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGTAGTTTTGTACATCTaGTGGCAAAGTCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSVVLYI*WQSLSH
Trigger: GTGAGAAAGACTTTGCCAGCAGATGTACAAAACTAC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATACTGTCTAGAATTTTaGAACATGGCTAATGGCTAC +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSYCLEF*NMANGY
Trigger: GTAGCCATTAGCCATGTTGCAAAATTCTAGACAGTA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAGAATCTTTCACTCTTaGCTGAGATCTTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSRIFHS*LRSFVL
Trigger: GAGAACAAAAGATCTCAGCCAAGAGTGAAAGATTCT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACTTGCTGGTTTGTTTaGTCTTTTAGGCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTCWFV*SFRLES
Trigger: GGATTCTAGCCTAAAAGACCAAACAAACCAGCAAGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTAAATGGATTGCGTTaGATGTTCATCAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLNGLR*MFIKGA
Trigger: TGCTCCTTTGATGAACATCCAACGCAATCCATTTAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGAGGATGAATGTTAAATaGATTGCGTTGGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRRMNVK*IALDVH
Trigger: ATGAACATCCAACGCAATCCATTTAACATTCATCCT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCAAGAAAAGGCTCCACTaGTATTACAAAAACACAAAG +
Preference number: 4 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFKKRLH*YYKNTK
Trigger: CTTTGTGTTTTTGTAATACCAGTGGAGCCTTTTCTT...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAACATAACCTTCCAATaGACTGAATTTAAACACTGC +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSNITFQ*TEFKHC
Trigger: GCAGTGTTTAAATTCAGTGCATTGGAAGGTTATGTT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACATTCATTTTGGTCACTaGAAAATGAATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNIHFGH*KMNHTP
Trigger: TGGAGTGTGATTCATTTTGCAGTGACCAAAATGAAT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGCATTCATTTGTTGCTaGATTACATTCATTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSAFICC*ITFICG
Trigger: ACCGCAAATGAATGTAATGCAGCAACAAATGAATGC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACACTTACTTTGCTTTCTaGCAATTTTACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNTYFAF*QFYSSI
Trigger: AATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCTGCAACACTTACTTTaGTTTCTGCCAATTTTACAG +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSLQHLL*FLPILQ
Trigger: CTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGAAGGATACAGAAGTTaGAGTGCAGACCTATATTTA +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSEGYRS*SADLYL
Trigger: TAAATATAGGTCTGCACTGCAACTTCTGTATCCTTC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATCTAGTAAGTCAAACTaGTTATCTCAATTAGGGGTA +
Preference number: 4 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSSSKSN*LSQLGV
Trigger: TACCCCTAATTGAGATAAGCAGTTTGACTTACTAGA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAGAATCTTTCACTCTTaGCTGAGATCTTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSRIFHS*LRSFVL
Trigger: GAGAACAAAAGATCTCAGCCAAGAGTGAAAGATTCT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CCA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAGGATGAATGTTAAATaGATTGCGTTGGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNRMNVK*IALDVH
Trigger: ATGAACATCCAACGCAATCCATTTAACATTCATCCT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACATTCATTTGCGGTTaGATCATATTTATAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTFICG*IIFIGS
Trigger: GCTACCTATAAATATGATGCAACCGCAAATGAATGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACTTACTTTGCTTTCTaGCAATTTTACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTYFAF*QFYSSI
Trigger: AATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGTTGAAATTGCACTTTaGAGATATCCTGATAATGTC +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSVEIAL*RYPDNV
Trigger: GACATTATCAGGATATCTGCAAAGTGCAATTTCAAC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR GCA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGATGTTTTACTGTGAATaGTCTGTACTAAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRMFYCE*SVLRLL
Trigger: CAACAACCTTAGTACAGAGCATTCACAGTAAAACAT...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CCA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAAGATATTCATAGGCTaGTGTTGTGCATTCATTTGT +
Preference number: 4 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSKIFIG*CCAFIC
Trigger: ACAAATGAATGCACAACACCAGCCTATGAATATCTT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS GCA 90 bp ACTTTGCCGCGGCCCCGCCGACCGACCGCTTCACTGCCGCCTTCCTaGATTCTCGCAGACTACGTTGCGGCGTCCCCTGCTCCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: TLPRPRRPTASLPPS*ILADYVAASPAPAL
Trigger: CAGGGCGGGAGCAGGGGACGCCGCAACGTAGTCTGCGAGAATGCAGGAAGGCGGCAGTGAAGCGGTCGGTCGGCGGGGCCGCGGCAAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS GCA 90 bp ACCGACCGCTTCACTGCCGCCTTCCTGCATTCTCGCAGACTACGTTaGGGCGTCCCCTGCTCCCGCCCTGAGGACGTCGCTTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TDRFTAAFLHSRRLR*GVPCSRPEDVAFLA
Trigger: TGCCAGAAAAGCGACGTCCTCAGGGCGGGAGCAGGGGACGCCGCAACGTAGTCTGCGAGAATGCAGGAAGGCGGCAGTGAAGCGGTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS GCA 90 bp CTGGACCTAGACCACTTTCTGGTTCTCCTTTCTCTCTCTCTCCTCTaGCCATCTCTATCACTTTCTCGTTCTCTGCTCTGGGACCTGGAT +
Preference number: 5 (lower is better)
Translates to: LDLDHFLVLLSLSLL*PSLSLSRSLLWDLD
Trigger: ATCCAGGTCCCAGAGCAGAGAACGAGAAAGTGATAGAGATGGGCAGAGGAGAGAGAGAGAAAGGAGAACCAGAAAGTGGTCTAGGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCTGAGCTCAAAGCGATaGGCCCACCCCGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFLSSKR*AHPGLP
Trigger: TGGGAGGCCGGGGTGGGCCAATCGCTTTGAGCTCAG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS TCA 90 bp ATGAGAAGAACTAGGAATACCCTGCAATTGCTTTCCATCTGGTTGTaGAGCAATGTAGTTGACTTGTTGGGATGGTGGGGGAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: MRRTRNTLQLLSIWL*SNVVDLLGWWGRGW
Trigger: CCACCCCCTCCCCCACCATCCCAACAAGTCAACTACATTGCTTCACAACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTCTTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CCA 90 bp TACCCAGATCAGGCAAACTTTCTTCATATCAGTGACAAGGCTGTTTaGTCTAATTTCAATACTCAGACCGAGGTCGAGGCGCTCGGTCCG +
Preference number: 5 (lower is better)
Translates to: YPDQANFLHISDKAV*SNFNTQTEVEALGP
Trigger: CGGACCGAGCGCCTCGACCTCGGTCTGAGTATTGAAATTAGACCAAACAGCCTTGTCACTGATATGAAGAAAGTTTGCCTGATCTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CCA 90 bp ATTCTGTTTCTCTGGGTCATTCTTTCTGTACCGATCATTTCCTCGTaGACATCTCCAACCATCATTTGCCCATCTTCCCTTCCACCGGGG +
Preference number: 5 (lower is better)
Translates to: ILFLWVILSVPIISS*TSPTIICPSSLPPG
Trigger: CCCCGGTGGAAGGGAAGATGGGCAAATGATGGTTGGAGATGTCCACGAGGAAATGATCGGTACAGAAAGAATGACCCAGAGAAACAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 90 bp CGAAGTATTACCAGAACTTGGTCCCTGAACCATTCCCGTATTTCCTaGGGCTGCTGTCGGAGCAGGCAAAACTGGTGTACTCATGTTATT +
Preference number: 5 (lower is better)
Translates to: RSITRTWSLNHSRIS*GCCRSRQNWCTHVI
Trigger: AATAACATGAGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
ENST00000550629.1
ENST00000550893.2
CDS GCA 90 bp TTTCTCTCTCTCTCCTCTGCCCATCTCTATCACTTTCTCGTTCTCTaGTCTGGGACCTGGATTTTTCTCCTGGGGAAGAATCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: FLSLSSAHLYHFLVL*SGTWIFLLGKNLSL
Trigger: GAGTGAAAGATTCTTCCCCAGGAGAAAAATCCAGGTCCCAGAGCAGAGAACGAGAAAGTGATAGAGATGGGCAGAGGAGAGAGAGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAATGTAGTTGACTTGTaGGGATGGTGGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHNVVDL*GWWGRG
Trigger: CCCCCTCCCCCACCATCCCAACAAGTCAACTACATT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS GCA 90 bp CCTCCTCTTGTTTCATCCATCCAGACTGTGGACCTGAAGAATTTCTaGCTCGTCGTGAGTAGTAGTTTTGTACATCTGCTGGCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: PPLVSSIQTVDLKNF*LVVSSSFVHLLAKS
Trigger: AGACTTTGCCAGCAGATGTACAAAACTACTACTCACGACGAGGCAGAAATTCTTCAGGTCCACAGTCTGGATGGATGAAACAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CCA 90 bp AGTAGTTTTGTACATCTGCTGGCAAAGTCTTTCTCACGGCCCAGCTaGATGCAGATGTCCATCCAGATCTATCTGCTGGTGTATCAAATG +
Preference number: 5 (lower is better)
Translates to: SSFVHLLAKSFSRPS*MQMSIQIYLLVYQM
Trigger: CATTTGATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGATGTACAAAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATACTCCTTCGTCCGCTTaGTGGTGTTACAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHTPSSA*WCYRVS
Trigger: AGAGACCCTGTAACACCACAAAGCGGACGAAGGAGT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAGCAATGTAGTTGACTaGTTGGGATGGTGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSNVVD*LGWWGR
Trigger: CCTCCCCCACCATCCCAACAAGTCAACTACATTGCT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS CCA 90 bp GGACCCTGGGGCAATCACTGTGCTTCTGAAGCTACATCTTTTGGATaGAACATTCCAGCAGTACACATTTATCTACTGCTTTCCGTACAA +
Preference number: 5 (lower is better)
Translates to: GPWGNHCASEATSFG*NIPAVHIYLLLSVQ
Trigger: TTGTACGGAAAGCAGTAGATAAATGTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAGAAGCACAGTGATTGCCCCAGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547654.5
ENST00000550629.1
CDS TCA 90 bp GCTGGATGCAGATGTCCATCCAGATCTATCTGCTGGTGTATCAAATaGGAACTCCTGTTCACTTTTTCGCTTATAGGATTGCTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: AGCRCPSRSICWCIK*ELLFTFSLIGLLFH
Trigger: GTGGAACAGCAATCCTATAAGCGAAAAAGTGAACAGGAGTTCTCATTTGATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS GCA 90 bp CTTAAACTTCATGAACCAACCTCTGCTAGCTTCAAACTTTTCTTCTaGAGCTTCCTTATCCCTCTCAGACTTCACTGGCTTGAAGAGCGT +
Preference number: 5 (lower is better)
Translates to: LKLHEPTSASFKLFF*SFLIPLRLHWLEER
Trigger: ACGCTCTTCAAGCCAGTGAAGTCTGAGAGGGATAAGGAAGCTGCAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAAGTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CCA 90 bp GAGACGCGCTCTGGATTAGGCTTTGAGTTAAGAGAATGTTACGACTaGTTTGACCTTCTACCCAGATCAGGCAAACTTTCTTCATATCAG +
Preference number: 5 (lower is better)
Translates to: ETRSGLGFELRECYD*FDLLPRSGKLSSYQ
Trigger: CTGATATGAAGAAAGTTTGCCTGATCTGGGTAGAAGGTCAAACCAGTCGTAACATTCTCTTAACTCAAAGCCTAATCCAGAGCGCGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCACTCCTTCGTCCGCTTaGTGGTGTTACAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFTPSSA*WCYRVS
Trigger: AGAGACCCTGTAACACCACAAAGCGGACGAAGGAGT...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGCATCACACCCAGAATaGTCTGATATTGGGGATCTC +
Preference number: 5 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYASHPE*SDIGDL
Trigger: GAGATCCCCAATATCAGACAATTCTGGGTGTGATGC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGGGCCGCTTCTTTTCTaGTGGAGTGTCTTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRGPLLF*WSVFVG
Trigger: CCCAACAAAGACACTCCACAAGAAAAGAAGCGGCCC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCTGGATTTCTGGTTCTaGGATCAGGCCCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLDFWF*DQAQSL
Trigger: TAAACTCTGGGCCTGATCCAAGAACCAGAAATCCAG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAATGTAGTTGACTTGTaGGGATGGTGGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSNVVDL*GWWGRG
Trigger: CCCCCTCCCCCACCATCCCAACAAGTCAACTACATT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATAAGTATTACCAGAACTaGGTCCCTGAACCATTCCCG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHKYYQN*VPEPFP
Trigger: CGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATACCCTTTACTTTCCCTaGAATTTTGTGGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHTLYFP*NFVGEG
Trigger: ACCCTCCCCCACAAAATTCAAGGGAAAGTAAAGGGT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS TCA 90 bp GATGAACTCTTACTTTTTGTTCTACATCTTGAGGGGGACCTAGAATaGGATCTGGACCTAGACCACTTTCTGGTTCTCCTTTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: DELLLFVLHLEGDLE*DLDLDHFLVLLSLS
Trigger: AGAGAGAGAAAGGAGAACCAGAAAGTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 90 bp CAGGTGATGTGTCAGATTCTGCTGTTTCTTCATCTACTGAATCATTaGAAGATGATTTTTCAGGGGCAGCTACAGAGCTCCGAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: QVMCQILLFLHLLNH*KMIFQGQLQSSEVS
Trigger: AGAAACTTCGGAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACACATCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 90 bp ATTGCGTTGGATGTTCATCAAAGGAGCATGAACACCCACTGGATATaGGAAGATATTCATAGGCTGGTGTTGTGCATTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: IALDVHQRSMNTHWI*EDIHRLVLCIHLLL
Trigger: CAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGTTTTGGAGCCTGTCTaGTTTGCTTTTCTGACTCAG +
Preference number: 5 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYVLEPV*FAFLTQ
Trigger: CTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAAC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGTTTTGGAGCCTGTCTaGTTTGCTTTTCTGACTCAG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHVLEPV*FAFLTQ
Trigger: CTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAAC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGGGACAAGATACAGGTaGGTACACTTTGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYGTRYR*VHFAFR
Trigger: TCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGGGACAAGATACAGGTaGGTACACTTTGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHGTRYR*VHFAFR
Trigger: TCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTCTTGTGGAGTGTCTTaGTTGGGTGACCAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHSCGVS*LGDQVV
Trigger: TACAACTTGGTCACCCAACAAAGACACTCCACAAGA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGCACTCCCTGAACTGTTaGAATTCCCTGAGAGGGGTT +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRHSLNC*NSLRGV
Trigger: AACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTG...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp CATATGTTTTACTGTGAATGCTCTGTACTAAGGTTGTTGTATCAGTTAAGAAGGCAGCCTCCCAAAGTGTaGGGATTACAGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: HMFYCECSVLRLLYQLRRQPPKV*GLQEEP
Trigger: TGGCTCCTCCTGTAATCCCAACACTTTGGGAGGCTG...CCTTCTTAACTGATACAACAACCTTAGTACAGAGCATTCACAGTAAAACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCTGCTCAGGCTTCATCTaGAACTCCTGTGCTCAAACG +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFCSGFI*NSCAQT
Trigger: CGTTTGAGCACAGGAGTTCAAGATGAAGCCTGAGCA...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS TCA 90 bp ACTCCTGTTCACTTTTTCGCTTATAGGATTGCTGTTCCACAAACTTaGAAGATTCACTCCCTGAACTGTTTGAATTCCCTGAGAGGGGTT +
Preference number: 5 (lower is better)
Translates to: TPVHFFAYRIAVPQT*KIHSLNCLNSLRGV
Trigger: AACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAAAGTGAACAGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CCA 90 bp AAATGGATTGCGTTGGATGTTCATCAAAGGAGCATGAACACCCACTaGATATGGGAAGATATTCATAGGCTGGTGTTGTGCATTCATTTG +
Preference number: 5 (lower is better)
Translates to: KWIALDVHQRSMNTH*IWEDIHRLVLCIHL
Trigger: CAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAATCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACTGGGCTTTCAGATGGTaGAGAAACAGTTTCAACCTT +
Preference number: 5 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYWAFRW*RNSFNL
Trigger: AAGGTTGAAACTGTTTCTCAACCATCTGAAAGCCCA...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGGGCCGCTTCTTTTCTaGTGGAGTGTCTTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSGPLLF*WSVFVG
Trigger: CCCAACAAAGACACTCCACAAGAAAAGAAGCGGCCC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTGCAATATCCTTTTTaGGGGACTGAGAACGGGATT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLQYPF*GTENGI
Trigger: AATCCCGTTCTCAGTCCCCAAAAAAGGATATTGCAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGAGACCGAGACTGAGATaGCCTCCTTTCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRRPRLR*PPFSCN
Trigger: ATTGCAAGAGAAAGGAGGCAATCTCAGTCTCGGTCT...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGCTGGATTTCTGGTTCTaGGATCAGGCCCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRLDFWF*DQAQSL
Trigger: TAAACTCTGGGCCTGATCCAAGAACCAGAAATCCAG...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCACTCCCTGAACTGTTaGAATTCCCTGAGAGGGGTT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNHSLNC*NSLRGV
Trigger: AACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTGCTGTTCCACAAACTaGAAAGATTCACTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHCCSTN*KDSLPE
Trigger: TTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCTGAGAACCATCAACTaGCTGGTTTGTTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHLRTIN*LVCLVF
Trigger: AAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAGCAATGTAGTTGACTaGTTGGGATGGTGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSNVVD*LGWWGR
Trigger: CCTCCCCCACCATCCCAACAAGTCAACTACATTGCT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGACATGGAACACACACTTGTTACTGTCACGGAAATAATTCATGGGAGTGCTACGGAAGGATACAGAAGTaGCAGTGCAGACCTATATTT +
Preference number: 5 (lower is better)
Translates to: RHGTHTCYCHGNNSWECYGRIQK*QCRPIF
Trigger: AAATATAGGTCTGCACTGCAACTTCTGTATCCTTCC...GTAGCACTCCCATGAATTATTTCCGTGACAGTAACAAGTGTGTGTTCCATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGGAAGGATACAGAAGTaGCAGTGCAGACCTATATTT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHGRIQK*QCRPIF
Trigger: AAATATAGGTCTGCACTGCAACTTCTGTATCCTTCC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCCAGGGTCTCACTATGTaGCTCAGGCTTCATCTTGAA +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFQGLTM*LRLHLE
Trigger: TTCAAGATGAAGCCTGAGCAACATAGTGAGACCCTG...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAACATGCCCAAGCAATaGAACCTCTGGGCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNNMPKQ*NLWALN
Trigger: GTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTATCTATGGTATCTTTaGGGCTTTCAGATGGTTGAG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHYLWYL*GFQMVE
Trigger: CTCAACCATCTGAAAGCCCAAAAGATACCATAGATA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACAGACCGAGACTGAGATaGCCTCCTTTCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNRPRLR*PPFSCN
Trigger: ATTGCAAGAGAAAGGAGGCAATCTCAGTCTCGGTCT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGTTTGTCAGCAGAATTaGGATCATCAGCATCTAGAT +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHVCQQN*DHQHLD
Trigger: ATCTAGATGCTGATGATCCAAATTCTGCTGACAAAC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAAAGTATTACCAGAACTaGGTCCCTGAACCATTCCCG +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSKYYQN*VPEPFP
Trigger: CGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATGAGGCATGTATCTCCTaGGATCTATTAACTTATCTG +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHEACIS*DLLTYL
Trigger: CAGATAAGTTAATAGATCCAAGGAGATACATGCCTC...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATATGAGACTTCAACTCTaGACCACATCACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHMRLQL*TTSLFL
Trigger: GAGAAAAAGTGATGTGGTCAAGAGTTGAAGTCTCAT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS TCA 90 bp TGCTCATTGCAACTTTTCAAGCAATTAGCAGACTGGTTTTCTACATaGGTCTGCACAGTACAAATGTTACTACTGTCTACATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: CSLQLFKQLADWFST*VCTVQMLLLSTSGW
Trigger: CCAACCAGATGTAGACAGTAGTAACATTTGTACTGTGCAGACTCATGTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTGCAATGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 90 bp TATTTCTACATCTTCAGTTTCAACATGCCCAAGCAATTGAACCTCTaGGCTCTTAACAGATTGTCTGTCCACTGTCTGTATAATTTCACC +
Preference number: 5 (lower is better)
Translates to: YFYIFSFNMPKQLNL*ALNRLSVHCLYNFT
Trigger: GGTGAAATTATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGATGTAGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACCAGAATTGTCTGATATaGGGGATCTCTGAGACTGAC +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNQNCLI*GISETD
Trigger: GTCAGTCTCAGAGATCCCCAATATCAGACAATTCTG...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGCATCACACCCAGAATaGTCTGATATTGGGGATCTC +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSASHPE*SDIGDL
Trigger: GAGATCCCCAATATCAGACAATTCTGGGTGTGATGC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATCCAGATATCTGGTCTaGCTTTTCCAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSSRYLV*LFQWIT
Trigger: GGTGATCCATTGGAAAAGCAAGACCAGATATCTGGA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTCAGAAGATTCTAACTaGGGGCTCTCTATAAGCTCC +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNSEDSN*GLSISS
Trigger: GGAGCTTATAGAGAGCCCCAAGTTAGAATCTTCTGA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATGGGCTCTTAACAGATaGTCTGTCCACTGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSWALNR*SVHCLY
Trigger: ATACAGACAGTGGACAGACAATCTGTTAAGAGCCCA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTGGGCTCTTAACAGATaGTCTGTCCACTGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNWALNR*SVHCLY
Trigger: ATACAGACAGTGGACAGACAATCTGTTAAGAGCCCA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGAACATGCCCAAGCAATaGAACCTCTGGGCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSNMPKQ*NLWALN
Trigger: GTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATCAGTCATTTCTATGTTaGTCAGCAGAATTTGGATCA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHQSFLC*SAEFGS
Trigger: TGATCCAAATTCTGCTGACAAACATAGAAATGACTG...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTGCTGTTCCACAAACTaGAAAGATTCACTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRCCSTN*KDSLPE
Trigger: TTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATTTTTCGCTTATAGGATaGCTGTTCCACAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHFSLIG*LFHKLE
Trigger: TTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAA...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGGTTAAATGGATTGCGTaGGATGTTCATCAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRVKWIA*DVHQRS
Trigger: GCTCCTTTGATGAACATCCAACGCAATCCATTTAAC...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GTTGAAATTGCACTTTGCAGATATCCTGATAATGTCCTTGACAGCGTTCCCCATACTGCAACACTTACTTaGCTTTCTGCCAATTTTACA +
Preference number: 5 (lower is better)
Translates to: VEIALCRYPDNVLDSVPHTATLT*LSANFT
Trigger: TGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAGT...ATGGGGAACGCTGTCAAGGACATTATCAGGATATCTGCAAAGTGCAATTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAATCCTGATAATGTCCTaGACAGCGTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSILIMS*TAFPIS
Trigger: TGAAATGGGGAACGCTGTCAAGGACATTATCAGGAT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACATCCTGATAATGTCCTaGACAGCGTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNILIMS*TAFPIS
Trigger: TGAAATGGGGAACGCTGTCAAGGACATTATCAGGAT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCAGAAACCTTCCTTATTaGGGAATTCAGGATCCTCGA +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFRNLPY*GIQDPR
Trigger: TCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS TCA 90 bp TGCTGCATTACATTCATTTGCGGTTGCATCATATTTATAGGTAGCTaGGAACCATCAACTTGCTGGTTTGTTTGGTCTTTTAGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: CCITFICGCIIFIGS*EPSTCWFVWSFRLE
Trigger: TTCTAGCCTAAAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAGCTACCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS GCA 90 bp AACAGTGAGCTCAAAATATTCAGTAAACCATGCTGTAAACGGATGTaGTGTCATCCAAGCTTTGTTGTTCCATTTATAGAGCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: NSELKIFSKPCCKRM*CHPSFVVPFIEHRV
Trigger: TACTCTGTGCTCTATAAATGGAACAACAAAGCTTGGATGACAGCACATCCGTTTACAGCATGGTTTACTGAATATTTTGAGCTCACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS GCA 90 bp GGATATGGGAAGATATTCATAGGCTGGTGTTGTGCATTCATTTGTTaGTGCATTACATTCATTTGCGGTTGCATCATATTTATAGGTAGC +
Preference number: 5 (lower is better)
Translates to: GYGKIFIGWCCAFIC*CITFICGCIIFIGS
Trigger: GCTACCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTGATCCTCTGGTATTaGATGTACCAGAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRLILWY*MYQKFA
Trigger: AGCAAACTTCTGGTACATCAAATACCAGAGGATCAA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTGCAGGTTTTCGTCTaGATCCTCTGGTATTTGATG +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLQVFV*ILWYLM
Trigger: CATCAAATACCAGAGGATCAAGACGAAAACCTGCAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCAGAATTGTCTGATATaGGGGATCTCTGAGACTGAC +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSQNCLI*GISETD
Trigger: GTCAGTCTCAGAGATCCCCAATATCAGACAATTCTG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTCCAGATATCTGGTCTaGCTTTTCCAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSSRYLV*LFQWIT
Trigger: GGTGATCCATTGGAAAAGCAAGACCAGATATCTGGA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTATCTATGGTATCTTTaGGGCTTTCAGATGGTTGAG +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRYLWYL*GFQMVE
Trigger: CTCAACCATCTGAAAGCCCAAAAGATACCATAGATA...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATTGCAATATCCTTTTTaGGGGACTGAGAACGGGATT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSLQYPF*GTENGI
Trigger: AATCCCGTTCTCAGTCCCCAAAAAAGGATATTGCAA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACTGAGAACCATCAACTaGCTGGTTTGTTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSLRTIN*LVCLVF
Trigger: AAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAATTCATAGGCTGGTGTaGTGCATTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSIHRLV*CIHLLL
Trigger: CAGCAACAAATGAATGCACAACACCAGCCTATGAAT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGTTAAATGGATTGCGTaGGATGTTCATCAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNVKWIA*DVHQRS
Trigger: GCTCCTTTGATGAACATCCAACGCAATCCATTTAAC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCTGAAGCTACATCTTTaGGATGGAACATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSLKLHL*DGTFQQ
Trigger: CTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCTGCTCTGTACTAAGGTaGTTGTATCAGTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFCSVLR*LYQLRR
Trigger: CCTTCTTAACTGATACAACAACCTTAGTACAGAGCA...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS TCA 90 bp CACTCCATAGGTATCATTTCATTGTTGTCCTCACTAAAATGCTTCTaGATCTGTTCAATGTGTGTTTTAGGCAACTCTGTAGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: HSIGIISLLSSLKCF*ICSMCVLGNSVDLG
Trigger: TCCTAGATCTACAGAGTTGCCTAAAACACACATTGAACAGATTCAGAAGCATTTTAGTGAGGACAACAATGAAATGATACCTATGGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS GCA 90 bp GGTAATGTATCAGGAAACCATGACAATTCCAGTTCATGTCTCTTCTaGCTAATCAATGCACTGATTTCACTGGCTTCTATAAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: GNVSGNHDNSSSCLF*LINALISLASINSV
Trigger: TACAGAATTTATAGAAGCCAGTGAAATCAGTGCATTGATTAGGCAGAAGAGACATGAACTGGAATTGTCATGGTTTCCTGATACATTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000484275.1
ENST00000547018.5
ENST00000549162.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACTTGATCCTCTGGTATTaGATGTACCAGAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNLILWY*MYQKFA
Trigger: AGCAAACTTCTGGTACATCAAATACCAGAGGATCAA...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGTGGGCTTTCAGATGGTaGAGAAACAGTTTCAACCTT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSWAFRW*RNSFNL
Trigger: AAGGTTGAAACTGTTTCTCAACCATCTGAAAGCCCA...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAATGAACTCTTACTTTTaGTTCTACATCTTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSMNSYF*FYILRG
Trigger: CCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCAT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACATGAACTCTTACTTTTaGTTCTACATCTTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNMNSYF*FYILRG
Trigger: CCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCAT...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGTTTGTCAGCAGAATTaGGATCATCAGCATCTAGAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNVCQQN*DHQHLD
Trigger: ATCTAGATGCTGATGATCCAAATTCTGCTGACAAAC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGGCATTTCTATAAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGCAGTCATTTCTATGTTaGTCAGCAGAATTTGGATCA +
Preference number: 5 (lower is better)
Translates to: RHFYKTLVNVTSKLTGPRQSFLC*SAEFGS
Trigger: TGATCCAAATTCTGCTGACAAACATAGAAATGACTG...CCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTTATAGAAATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGATTCATAGGCTGGTGTaGTGCATTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSIHRLV*CIHLLL
Trigger: CAGCAACAAATGAATGCACAACACCAGCCTATGAAT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGGCCAATTTTACCTCTaGTGCTGCTTTTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNGQFYL*CCFFLN
Trigger: ATTCAAGAAAAAGCAGCACAAGAGGTAAAATTGGCC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AGAAACCTTCCTTATTTGGGAATTCAGGATCCTCGATTTCTAATTTCTCGCTTCTCTGTACTAAGGTTGTaGTATCAGTTAAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RNLPYLGIQDPRFLISRFSVLRL*YQLRRQ
Trigger: TTGCCTTCTTAACTGATACAACAACCTTAGTACAGA...GAAGCGAGAAATTAGAAATCGAGGATCCTGAATTCCCAAATAAGGAAGGTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395454.6
CDS CCA 90 bp GACTCTACATTCTCAGATAAGTCACTTAGGGGACAAGATACAGGTTaGTACACTTTGCTTTCAGATGTTAAACATGTAGGAAAATCATTT +
Preference number: 5 (lower is better)
Translates to: DSTFSDKSLRGQDTG*YTLLSDVKHVGKSF
Trigger: AAATGATTTTCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTTATCTGAGAATGTAGAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCACCTCTGTATCATAATTaGCAGTATGCTTCTCACTTT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSPLYHN*QYASHF
Trigger: AAAGTGAGAAGCATACTGCAAATTATGATACAGAGG...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAACAGGTTGGTACACTTaGCTTTCAGATGTTAAACAT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSTGWYT*LSDVKH
Trigger: ATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGT...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCGAGTACGAGGCTTTTaGGTTTTATCTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSRVRGF*VLSMVS
Trigger: AGATACCATAGATAAAACCAAAAAGCCTCGTACTCG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCATTTTCGCTTATAGGATaGCTGTTCCACAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSFSLIG*LFHKLE
Trigger: TTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAA...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp AAAACATTGGTCAATGTGACTAGTAAGTTAACGGGACCAAGGTTTCAAAGATCAGTGTTGTGCATTCATTaGTTGCTGCATTACATTCAT +
Preference number: 5 (lower is better)
Translates to: KTLVNVTSKLTGPRFQRSVLCIH*LLHYIH
Trigger: ATGAATGTAATGCAGCAACAAATGAATGCACAACAC...TGATCTTTGAAACCTTGGTCCCGTTAACTTACTAGTCACATTGACCAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGTGTTGTGCATTCATTaGTTGCTGCATTACATTCAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNVLCIH*LLHYIH
Trigger: ATGAATGTAATGCAGCAACAAATGAATGCACAACAC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGGCCAATTTTACCTCTaGTGCTGCTTTTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSGQFYL*CCFFLN
Trigger: ATTCAAGAAAAAGCAGCACAAGAGGTAAAATTGGCC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp TTCCAGTATCCACACTATAACACAGTCCTAGTAAAGATGCACATTCCTTTAAACGCTAATGCATATCCCTaGCAAGAAGTACCTAATAAT +
Preference number: 5 (lower is better)
Translates to: FQYPHYNTVLVKMHIPLNANAYP*QEVPNN
Trigger: ATTATTAGGTACTTCTTGCAAGGGATATGCATTAGC...GTTTAAAGGAATGTGCATCTTTACTAGGACTGTGTTATAGTGTGGATACTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGCCTCTGTATCATAATTaGCAGTATGCTTCTCACTTT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSPLYHN*QYASHF
Trigger: AAAGTGAGAAGCATACTGCAAATTATGATACAGAGG...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGACAGGTTGGTACACTTaGCTTTCAGATGTTAAACAT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSTGWYT*LSDVKH
Trigger: ATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGT...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000465950.5
CDS-3UTR CAA 90 bp GGTCATACAATAGGTGAAGAGTGTCTCAATGTTTTGAACACTAAATTTTACTCGGAACTTTCCAGGTACTaGGTATGTACTGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: GHTIGEECLNVLNTKFYSELSRY*VCTENS
Trigger: AGAATTTTCAGTACATACCAAGTACCTGGAAAGTTC...CGAGTAAAATTTAGTGTTCAAAACATTGAGACACTCTTCACCTATTGTATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369367.8
CDS GCA 72 bp CGGCCCCGCCGACCGACCGCTTCACTGCCGCCTTCCTaGATTCTCGCAGACTACGTTGCGGCGTCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: RPRRPTASLPPS*ILADYVAASPA
Trigger: AGCAGGGGACGCCGCAACGTAGTCTGCGAGAATGCAGGAAGGCGGCAGTGAAGCGGTCGGTCGGCGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS GCA 72 bp CCACTTTGCCGCGGCCCCGCCGACCGACCGCTTCACTaGCGCCTTCCTGCATTCTCGCAGACTACGTTGCGG +
Preference number: 6 (lower is better)
Translates to: PLCRGPADRPLH*RLPAFSQTTLR
Trigger: CCGCAACGTAGTCTGCGAGAATGCAGGAAGGCGGCAGTGAAGCGGTCGGTCGGCGGGGCCGCGGCAAAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS GCA 72 bp GCTTTCAGCCGCGCGCTCACACGTTTTCCTGTCGCCTaGCCCCGTTCTGTTCGCGCGTGCTGCGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: AFSRALTRFPVA*PRSVRACCALQ
Trigger: CTGGAGAGCGCAGCACGCGCGAACAGAACGGGGGCAGGCGACAGGAAAACGTGTGAGCGCGCGGCTGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS GCA 72 bp TTCACTGCCGCCTTCCTGCATTCTCGCAGACTACGTTaGGGCGTCCCCTGCTCCCGCCCTGAGGACGTCGCT +
Preference number: 6 (lower is better)
Translates to: FTAAFLHSRRLR*GVPCSRPEDVA
Trigger: AGCGACGTCCTCAGGGCGGGAGCAGGGGACGCCGCAACGTAGTCTGCGAGAATGCAGGAAGGCGGCAGTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS TCA 72 bp GATGGTGGGGGAGGGGGTGGTGGTGGTGGTAGTCCCTaGGATACACTGGTAGGAGTGGCTACCTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: DGGGGGGGGGSP*DTLVGVATCMR
Trigger: CCTCATGCAGGTAGCCACTCCTACCAGTGTATCTCAGGGACTACCACCACCACCACCCCCTCCCCCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS GCA 72 bp TTCCTGCATTCTCGCAGACTACGTTGCGGCGTCCCCTaGTCCCGCCCTGAGGACGTCGCTTTTCTGGCACTT +
Preference number: 6 (lower is better)
Translates to: FLHSRRLRCGVP*SRPEDVAFLAL
Trigger: AAGTGCCAGAAAAGCGACGTCCTCAGGGCGGGAGCAGGGGACGCCGCAACGTAGTCTGCGAGAATGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547018.5
CDS CCA 72 bp ACCAGAACTTGGTCCCTGAACCATTCCCGTATTTCCTaGGGCTGCTGTCGGAGCAGGCAAAACTGGTGTACT +
Preference number: 6 (lower is better)
Translates to: TRTWSLNHSRIS*GCCRSRQNWCT
Trigger: AGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
ENST00000550629.1
ENST00000550893.2
CDS GCA 72 bp ACTTGGTCCCTGAACCATTCCCGTATTTCCTGGGGCTaGTGTCGGAGCAGGCAAAACTGGTGTACTCATGTT +
Preference number: 6 (lower is better)
Translates to: TWSLNHSRISWG*CRSRQNWCTHV
Trigger: AACATGAGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
ENST00000550629.1
ENST00000550893.2
CDS CCA 72 bp GTACATCTGCTGGCAAAGTCTTTCTCACGGCCCAGCTaGATGCAGATGTCCATCCAGATCTATCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VHLLAKSFSRPS*MQMSIQIYLLV
Trigger: CACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS TCA 72 bp CTGCAGCTTCCTTATCCCTCTCAGACTTCACTGGCTTaGAGAGCGTTAGAGACGCGCTCTGGATTAGGCTTT +
Preference number: 6 (lower is better)
Translates to: LQLPYPSQTSLA*RALETRSGLGF
Trigger: AAAGCCTAATCCAGAGCGCGTCTCTAACGCTCTTCAAGCCAGTGAAGTCTGAGAGGGATAAGGAAGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS GCA 72 bp ATCTGCTGGCAAAGTCTTTCTCACGGCCCAGCTGGATaGAGATGTCCATCCAGATCTATCTGCTGGTGTATC +
Preference number: 6 (lower is better)
Translates to: ICWQSLSHGPAG*RCPSRSICWCI
Trigger: GATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CAA 72 bp TCTGCAGCTTCCTTATCCCTCTCAGACTTCACTGGCTaGAAGAGCGTTAGAGACGCGCTCTGGATTAGGCTT +
Preference number: 6 (lower is better)
Translates to: SAASLSLSDFTG*KSVRDALWIRL
Trigger: AAGCCTAATCCAGAGCGCGTCTCTAACGCTCTTCAAGCCAGTGAAGTCTGAGAGGGATAAGGAAGCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 72 bp GCTGCATTAGCCCCTAACAAGACAGTCAGCCTGTCCTaGGAAGCTTTGAAGCCAGGCATTGACTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: AALAPNKTVSLS*EALKPGIDFSS
Trigger: AGAGGAGAAGTCAATGCCTGGCTTCAAAGCTTCCAAGGACAGGCTGACTGTCTTGTTAGGGGCTAATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 72 bp GCCCCTAACAAGACAGTCAGCCTGTCCTTGGAAGCTTaGAAGCCAGGCATTGACTTCTCCTCTCTACTTATG +
Preference number: 6 (lower is better)
Translates to: APNKTVSLSLEA*KPGIDFSSLLM
Trigger: CATAAGTAGAGAGGAGAAGTCAATGCCTGGCTTCAAAGCTTCCAAGGACAGGCTGACTGTCTTGTTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 72 bp TGTTACCTGGGGCATCACACCCAGAATTGTCTGATATaGGGGATCTCTGAGACTGACTGGCTGTTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: CYLGHHTQNCLI*GISETDWLFQL
Trigger: GAGCTGAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 90 bp TCTTTCTGTACCGATCATTTCCTCGTGGACATCTCCAACCATCATTaGCCCATCTTCCCTTCCACCGGGGAGAGTAACTATCTCTGTCAA +
Preference number: 6 (lower is better)
Translates to: SFCTDHFLVDISNHH*PIFPSTGESNYLCQ
Trigger: TTGACAGAGATAGTTACTCTCCCCGGTGGAAGGGAAGATGGGCAAATGATGGTTGGAGATGTCCACGAGGAAATGATCGGTACAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 90 bp ATGGATTACTGTTACCTGGGGCATCACACCCAGAATTGTCTGATATaGGGGATCTCTGAGACTGACTGGCTGTTTCAGCTCTTGTGTTAC +
Preference number: 6 (lower is better)
Translates to: MDYCYLGHHTQNCLI*GISETDWLFQLLCY
Trigger: GTAACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS TCA 72 bp ATTACTGTTACCTGGGGCATCACACCCAGAATTGTCTaGTATTGGGGATCTCTGAGACTGACTGGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: ITVTWGITPRIV*YWGSLRLTGCF
Trigger: GAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 72 bp GCGTTGGATGTTCATCAAAGGAGCATGAACACCCACTaGATATGGGAAGATATTCATAGGCTGGTGTTGTGC +
Preference number: 6 (lower is better)
Translates to: ALDVHQRSMNTH*IWEDIHRLVLC
Trigger: GCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CAA 72 bp GAGCTATCTGCGCTGGCTTCCACTGCAACACTTACTTaGCTTTCTGCCAATTTTACAGCAGCATTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: ELSALASTATLT*LSANFTAALEA
Trigger: AGCCTCTAATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
ENST00000550629.1
ENST00000550893.2
CDS TCA 72 bp CTGAAGGGCAGGGTTGGCTGTGGCAATTCCTTAAAATaGGATAACATTCAAGTATGCCACACTGACACTCCT +
Preference number: 6 (lower is better)
Translates to: LKGRVGCGNSLK*DNIQVCHTDTP
Trigger: AGGAGTGTCAGTGTGGCATACTTGAATGTTATCTCATTTTAAGGAATTGCCACAGCCAACCCTGCCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS GCA 72 bp GTTTCATCCATCCAGACTGTGGACCTGAAGAATTTCTaGCTCGTCGTGAGTAGTAGTTTTGTACATCTGCTG +
Preference number: 6 (lower is better)
Translates to: VSSIQTVDLKNF*LVVSSSFVHLL
Trigger: CAGCAGATGTACAAAACTACTACTCACGACGAGGCAGAAATTCTTCAGGTCCACAGTCTGGATGGATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CCA 72 bp CAGGCAAACTTTCTTCATATCAGTGACAAGGCTGTTTaGTCTAATTTCAATACTCAGACCGAGGTCGAGGCG +
Preference number: 6 (lower is better)
Translates to: QANFLHISDKAV*SNFNTQTEVEA
Trigger: CGCCTCGACCTCGGTCTGAGTATTGAAATTAGACCAAACAGCCTTGTCACTGATATGAAGAAAGTTTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 72 bp TTCCTCTTCTTACAGACTTCCGTTTTGGAGCCTGTCTaGTTTGCTTTTCTGACTCAGCTGAAGAGGGAACAC +
Preference number: 6 (lower is better)
Translates to: FLFLQTSVLEPV*FAFLTQLKREH
Trigger: GTGTTCCCTCTTCAGCTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTAAGAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp AAGGTGGTTTTCTTCCTCTTCTTACAGACTTCCGTTTaGGAGCCTGTCTTGTTTGCTTTTCTGACTCAGCTG +
Preference number: 6 (lower is better)
Translates to: KVVFFLFLQTSV*EPVLFAFLTQL
Trigger: CAGCTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTAAGAAGAGGAAGAAAACCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp ATGCCCAAGCAATTGAACCTCTGGGCTCTTAACAGATaGTCTGTCCACTGTCTGTATAATTTCACCCTCAGA +
Preference number: 6 (lower is better)
Translates to: MPKQLNLWALNR*SVHCLYNFTLR
Trigger: TCTGAGGGTGAAATTATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp CCTGGGGCAATCACTGTGCTTCTGAAGCTACATCTTTaGGATGGAACATTCCAGCAGTACACATTTATCTAC +
Preference number: 6 (lower is better)
Translates to: PGAITVLLKLHL*DGTFQQYTFIY
Trigger: GTAGATAAATGTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAGAAGCACAGTGATTGCCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547654.5
ENST00000550629.1
CDS CAA 90 bp ACAGGTGATGTGTCAGATTCTGCTGTTTCTTCATCTACTGAATCATaGGAAGATGATTTTTCAGGGGCAGCTACAGAGCTCCGAAGTTTC +
Preference number: 6 (lower is better)
Translates to: TGDVSDSAVSSSTES*EDDFSGAATELRSF
Trigger: GAAACTTCGGAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACACATCACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS TCA 72 bp TTACTTTTTGTTCTACATCTTGAGGGGGACCTAGAATaGGATCTGGACCTAGACCACTTTCTGGTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: LLFVLHLEGDLE*DLDLDHFLVLL
Trigger: AAGGAGAACCAGAAAGTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTCAAGATGTAGAACAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS GCA 72 bp TTGAATTTGCAATTTCTTGTCTGTCTTCGAGCTATCTaGGCTGGCTTCCACTGCAACACTTACTTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LNLQFLVCLRAI*AGFHCNTYFAF
Trigger: GAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGAAGACAGACAAGAAATTGCAAATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
ENST00000550629.1
ENST00000550893.2
CDS CCA 72 bp ATCTTCAGTTTCAACATGCCCAAGCAATTGAACCTCTaGGCTCTTAACAGATTGTCTGTCCACTGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: IFSFNMPKQLNL*ALNRLSVHCLY
Trigger: ATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CCA 72 bp GATGTTCATCAAAGGAGCATGAACACCCACTGGATATaGGAAGATATTCATAGGCTGGTGTTGTGCATTCAT +
Preference number: 6 (lower is better)
Translates to: DVHQRSMNTHWI*EDIHRLVLCIH
Trigger: ATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CAA 72 bp GTGTCAGATTCTGCTGTTTCTTCATCTACTGAATCATaGGAAGATGATTTTTCAGGGGCAGCTACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: VSDSAVSSSTES*EDDFSGAATEL
Trigger: GAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 90 bp AGCATGAACACCCACTGGATATGGGAAGATATTCATAGGCTGGTGTaGTGCATTCATTTGTTGCTGCATTACATTCATTTGCGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: SMNTHWIWEDIHRLV*CIHLLLHYIHLRLH
Trigger: ATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS TCA 72 bp AAACACTGCCTGAAAAGGTTTACGGTCAATAGGACATaGAGCCAGTGTCTCTGCCCATTTAAGAATACAAGT +
Preference number: 6 (lower is better)
Translates to: KHCLKRFTVNRT*SQCLCPFKNTS
Trigger: ACTTGTATTCTTAAATGGGCAGAGACACTGGCTTCATGTCCTATTGACCGTAAACCTTTTCAGGCAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266589.10
ENST00000369367.8
CDS TCA 72 bp TTAAATGGATTGCGTTGGATGTTCATCAAAGGAGCATaGACACCCACTGGATATGGGAAGATATTCATAGGC +
Preference number: 6 (lower is better)
Translates to: LNGLRWMFIKGA*TPTGYGKIFIG
Trigger: GCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAATCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS GCA 72 bp GGTCTCAACAGTGAGCTCAAAATATTCAGTAAACCATaGTGTAAACGGATGTGCTGTCATCCAAGCTTTGTT +
Preference number: 6 (lower is better)
Translates to: GLNSELKIFSKP*CKRMCCHPSFV
Trigger: AACAAAGCTTGGATGACAGCACATCCGTTTACAGCATGGTTTACTGAATATTTTGAGCTCACTGTTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CCA 72 bp TCTGGATTAGGCTTTGAGTTAAGAGAATGTTACGACTaGTTTGACCTTCTACCCAGATCAGGCAAACTTTCT +
Preference number: 6 (lower is better)
Translates to: SGLGFELRECYD*FDLLPRSGKLS
Trigger: AGAAAGTTTGCCTGATCTGGGTAGAAGGTCAAACCAGTCGTAACATTCTCTTAACTCAAAGCCTAATCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CCA 72 bp GGCAATCACTGTGCTTCTGAAGCTACATCTTTTGGATaGAACATTCCAGCAGTACACATTTATCTACTGCTT +
Preference number: 6 (lower is better)
Translates to: GNHCASEATSFG*NIPAVHIYLLL
Trigger: AAGCAGTAGATAAATGTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAGAAGCACAGTGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547654.5
ENST00000550629.1
CDS CAA 72 bp ATCATCTCAGCAAGGCTTCAGCAAGTCATAATCTTTTaGATGGTGGAGGGTCTTGCTTTGATGTTGATGGTT +
Preference number: 6 (lower is better)
Translates to: IISARLQQVIIF*MVEGLALMLMV
Trigger: AACCATCAACATCAAAGCAAGACCCTCCACCATCAAAAAGATTATGACTTGCTGAAGCCTTGCTGAGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 72 bp TATTTCTACATCTTCAGTTTCAACATGCCCAAGCAATaGAACCTCTGGGCTCTTAACAGATTGTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: YFYIFSFNMPKQ*NLWALNRLSVH
Trigger: GTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGATGTAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS TCA 72 bp CACTTTTTCGCTTATAGGATTGCTGTTCCACAAACTTaGAAGATTCACTCCCTGAACTGTTTGAATTCCCTG +
Preference number: 6 (lower is better)
Translates to: HFFAYRIAVPQT*KIHSLNCLNSL
Trigger: CAGGGAATTCAAACAGTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS TCA 72 bp AGATGTCCATCCAGATCTATCTGCTGGTGTATCAAATaGGAACTCCTGTTCACTTTTTCGCTTATAGGATTG +
Preference number: 6 (lower is better)
Translates to: RCPSRSICWCIK*ELLFTFSLIGL
Trigger: CAATCCTATAAGCGAAAAAGTGAACAGGAGTTCTCATTTGATACACCAGCAGATAGATCTGGATGGACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS GCA 72 bp TCAGGAAACCATGACAATTCCAGTTCATGTCTCTTCTaGCTAATCAATGCACTGATTTCACTGGCTTCTATA +
Preference number: 6 (lower is better)
Translates to: SGNHDNSSSCLF*LINALISLASI
Trigger: TATAGAAGCCAGTGAAATCAGTGCATTGATTAGGCAGAAGAGACATGAACTGGAATTGTCATGGTTTCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000484275.1
ENST00000547018.5
ENST00000549162.5
CDS CCA 72 bp TGCACAGTACAAATGTTACTACTGTCTACATCTGGTTaGTGCTCTTTTTCTAACACAGGTGATGTGTCAGAT +
Preference number: 6 (lower is better)
Translates to: CTVQMLLLSTSG*CSFSNTGDVSD
Trigger: ATCTGACACATCACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAGTAGTAACATTTGTACTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp TGGGAAGATATTCATAGGCTGGTGTTGTGCATTCATTaGTTGCTGCATTACATTCATTTGCGGTTGCATCAT +
Preference number: 6 (lower is better)
Translates to: WEDIHRLVLCIH*LLHYIHLRLHH
Trigger: ATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CAA 72 bp ACCCACTGGATATGGGAAGATATTCATAGGCTGGTGTaGTGCATTCATTTGTTGCTGCATTACATTCATTTG +
Preference number: 6 (lower is better)
Translates to: THWIWEDIHRLV*CIHLLLHYIHL
Trigger: CAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CAA 90 bp CACTGGATATGGGAAGATATTCATAGGCTGGTGTTGTGCATTCATTaGTTGCTGCATTACATTCATTTGCGGTTGCATCATATTTATAGG +
Preference number: 6 (lower is better)
Translates to: HWIWEDIHRLVLCIH*LLHYIHLRLHHIYR
Trigger: CCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000549162.5
CDS CCA 72 bp CATTTATCTCCGTGTATTTCCATCAGAGTTCTTGGATaGCTACGTGCACTGTCAATAAGTAAGTACTATGTT +
Preference number: 6 (lower is better)
Translates to: HLSPCISIRVLG*LRALSISKYYV
Trigger: AACATAGTACTTACTTATTGACAGTGCACGTAGCCATCCAAGAACTCTGATGGAAATACACGGAGATAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CCA 72 bp TTCTCAGATAAGTCACTTAGGGGACAAGATACAGGTTaGTACACTTTGCTTTCAGATGTTAAACATGTAGGA +
Preference number: 6 (lower is better)
Translates to: FSDKSLRGQDTG*YTLLSDVKHVG
Trigger: TCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTTATCTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp AGACTTAACAGTCAAAATTACTTCTTGATCACTGGGTaGAAAAATGGATGTTGTGTTAGCAGGCATGGCAAC +
Preference number: 6 (lower is better)
Translates to: RLNSQNYFLITG*KNGCCVSRHGN
Trigger: GTTGCCATGCCTGCTAACACAACATCCATTTTTCAACCCAGTGATCAAGAAGTAATTTTGACTGTTAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS TCA 72 bp CAACTTTTCAAGCAATTAGCAGACTGGTTTTCTACATaGGTCTGCACAGTACAAATGTTACTACTGTCTACA +
Preference number: 6 (lower is better)
Translates to: QLFKQLADWFST*VCTVQMLLLST
Trigger: TGTAGACAGTAGTAACATTTGTACTGTGCAGACTCATGTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS GCA 72 bp TTTACCTCTGATTGTGAAAGTCCAGATATCTGGTCTTaGTTTTCCAATGGATCACCTCCTTTTTCAAGAATA +
Preference number: 6 (lower is better)
Translates to: FTSDCESPDIWS*FSNGSPPFSRI
Trigger: TATTCTTGAAAAAGGAGGTGATCCATTGGAAAAGCAAGACCAGATATCTGGACTTTCACAATCAGAGGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp TTTTCTGTTATCCAATTGGGACAGTCATTTCTATGTTaGTCAGCAGAATTTGGATCATCAGCATCTAGATGG +
Preference number: 6 (lower is better)
Translates to: FSVIQLGQSFLC*SAEFGSSASRW
Trigger: CCATCTAGATGCTGATGATCCAAATTCTGCTGACAAACATAGAAATGACTGTCCCAATTGGATAACAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CAA 72 bp GAAGATATTCATAGGCTGGTGTTGTGCATTCATTTGTaGCTGCATTACATTCATTTGCGGTTGCATCATATT +
Preference number: 6 (lower is better)
Translates to: EDIHRLVLCIHL*LHYIHLRLHHI
Trigger: AATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS CAA 90 bp ATGCTATTTGACAGCATTTTATCCACAGCAGAATGTCTTTCAAAATaGGAGTTAATCCTCTCAAACTCTGCCACTGTGTTATCAACTAAG +
Preference number: 6 (lower is better)
Translates to: MLFDSILSTAECLSK*ELILSNSATVLSTK
Trigger: CTTAGTTGATAACACAGTGGCAGAGTTTGAGAGGATTAACTCCAATTTTGAAAGACATTCTGCTGTGGATAAAATGCTGTCAAATAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 90 bp AACAGAATAAGACTTAACAGTCAAAATTACTTCTTGATCACTGGGTaGAAAAATGGATGTTGTGTTAGCAGGCATGGCAACATTTATCTC +
Preference number: 6 (lower is better)
Translates to: NRIRLNSQNYFLITG*KNGCCVSRHGNIYL
Trigger: GAGATAAATGTTGCCATGCCTGCTAACACAACATCCATTTTTCAACCCAGTGATCAAGAAGTAATTTTGACTGTTAAGTCTTATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266589.10
CDS CAA 90 bp TTCCTCTGTATCATAATTTGCAGTATGCTTCTCACTTTCTTCTATTaGCTCATTGCAACTTTTCAAGCAATTAGCAGACTGGTTTTCTAC +
Preference number: 6 (lower is better)
Translates to: FLCIIICSMLLTFFY*LIATFQAISRLVFY
Trigger: GTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTGCAATGAGCAAATAGAAGAAAGTGAGAAGCATACTGCAAATTATGATACAGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp AAGTCACTTAGGGGACAAGATACAGGTTGGTACACTTaGCTTTCAGATGTTAAACATGTAGGAAAATCATTT +
Preference number: 6 (lower is better)
Translates to: KSLRGQDTGWYT*LSDVKHVGKSF
Trigger: AAATGATTTTCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS GCA 72 bp ATATTCATAGGCTGGTGTTGTGCATTCATTTGTTGCTaGATTACATTCATTTGCGGTTGCATCATATTTATA +
Preference number: 6 (lower is better)
Translates to: IFIGWCCAFICC*ITFICGCIIFI
Trigger: TATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547950.1
ENST00000549162.5
CDS GCA 72 bp AAGAAGAAATCAAATAACCTATGTGAAAAGTCCCTCTaGCCATTTAAGAATACAAGTCATACAGAAGACATG +
Preference number: 6 (lower is better)
Translates to: KKKSNNLCEKSL*PFKNTSHTEDM
Trigger: CATGTCTTCTGTATGACTTGTATTCTTAAATGGGCAGAGGGACTTTTCACATAGGTTATTTGATTTCTTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395453.2
CDS CAA 72 bp AAGAGTTTCTATGTATCCACTTCAAGTCACAAACTTTaGCACTTAATAGATCTTCTCTTACGATGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: KSFYVSTSSHKL*HLIDLLLRWLF
Trigger: GAAAAGCCATCGTAAGAGAAGATCTATTAAGTGCAAAAGTTTGTGACTTGAAGTGGATACATAGAAACTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369367.8
ENST00000547018.5
CDS CAA 72 bp AAGATGAAGATCCTACTCTTTCCTCTGTATCATAATTaGCAGTATGCTTCTCACTTTCTTCTATTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: KMKILLFPLYHN*QYASHFLLFAH
Trigger: ATGAGCAAATAGAAGAAAGTGAGAAGCATACTGCAAATTATGATACAGAGGAAAGAGTAGGATCTTCATCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369367.8
ENST00000465950.5
ENST00000547018.5
ENST00000549162.5
CDS CAA 72 bp GTAACTTACTATGTATCCACTTCAAGTCACAAACTTTaGCACTTAATAGATCTTCTCTTACGATGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: VTYYVSTSSHKL*HLIDLLLRWLF
Trigger: GAAAAGCCATCGTAAGAGAAGATCTATTAAGTGCAAAAGTTTGTGACTTGAAGTGGATACATAGTAAGTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551391.1