RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126461

Ensembl transcript IDs: ENST00000360565.8, ENST00000595242.3, ENST00000598359.5, ENST00000601038.5

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGGAGCCCAGGCCGGCTaGCGCGGCATCCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEGAQAG*RGILGR
Trigger: CCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCCGTCCTCCAGGCCCTaGGACGGGGCAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAPSSRP*DGAAGW
Trigger: CCAGCCTGCTGCCCCGTCTCAGGGCCTGGAGGACGG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCGCGCTGGGGGCAGTaGTTGGGGCGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPRWGQ*LGRLQQ
Trigger: CTGCTGCAGCCGCCCCAAGCACTGCCCCCAGCGCGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCGGGTGGAGTCCACCTaGGGCGGCGTTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERVEST*GGVPGA
Trigger: CGCCCCTGGAACGCCGCCCCAGGTGGACTCCACCCG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCGGACGACGAGGCGTaGGAGCCGGGCTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAADDEA*EPGLRS
Trigger: GGACCGCAAGCCCGGCTCCCACGCCTCGTCGTCCGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCGAGTCACCGGCTGTaGACCCCGCGCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPSHRL*TPRWGQ
Trigger: CTGCCCCCAGCGCGGGGTCCACAGCCGGTGACTCGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCTCGAGGACGACGATaGGGAAGTGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPRGRR*GSGRGR
Trigger: CCGCCCCCGGCCACTTCCTCATCGTCGTCCTCGAGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCCTTGGCCTCGCCGCTaGGCTTGCGTTCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAPWPRR*ACVPAW
Trigger: CCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCGGTGTTTCCCGCGGTaGCGCTCGCGCCTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARCFPR*RSRLED
Trigger: GTCCTCGAGGCGCGAGCGGCACCGCGGGAAACACCG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCTTCTGGCTGCTCTTaGCGCCCCGCTCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPSGCS*RPAPRR
Trigger: GCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGACCCGCCGGCGCATaGCTCCATCAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARPAGA*LHQPGW
Trigger: CCACCCGGGCTGATGGAGCCATGCGCCGGCGGGTCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGGGACAGCGCCAGCCTaGGCTCCTCCTCCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEGTAPA*APPPAG
Trigger: TCCAGCCGGAGGAGGAGCCCAGGCTGGCGCTGTCCC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCACGAGGCGGCCTCCTTaGCCTCGCCGCTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELATRRPP*PRRCAC
Trigger: GCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGGTCACCACACGAGGTaGAGCCAGAGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEGHHTR*SQRAAG
Trigger: CCCCGCCGCCCTCTGGCTCCACCTCGTGTGGTGACC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCGGCGCCGATCCTTCTaGCTGCTCTTGCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARRRSF*LLLPPR
Trigger: GCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGGGCGGGGGCAACGTaGGCAGCTGGGAGACACGGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAWAGAT*AAGRHG
Trigger: CCCGTGTCTCCCAGCTGCCCACGTTGCCCCCGCCCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTTGTCTGGGGGCCCTaGCTCCTTGGGCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALVWGP*LLGRPW
Trigger: CCACGGCCGCCCAAGGAGCCAGGGCCCCCAGACAAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCGGGCCACCCTTGTCTaGGGGCCCTGGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERATLV*GPWLLG
Trigger: CCCAAGGAGCCAGGGCCCCCAGACAAGGGTGGCCCG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTCCCGTGCCCAAGGTaGGGTGACGGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALPCPR*GDGHRW
Trigger: CCACCTGTGCCCGTCACCTCACCTTGGGCACGGGAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTTTGGCGGGGGCCCTaGGGAAGGCGCCGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELWRGP*GRRRLL
Trigger: AAGGAGTCGGCGCCTTCCTCAGGGCCCCCGCCAAAG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGCCTGAGCCGCTGCTaGCTGGTGGCTTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASLSRC*LVALAG
Trigger: CCCCGCCAAAGCCACCAGTCAGCAGCGGCTCAGGCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCGGGGTGGTGCTGCTaGCACCCTCGCGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPGWCC*HPRGSA
Trigger: TGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCGGTCCCGCGAGCGGTaGTTCTTGGAGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERSRER*FLESQG
Trigger: GCCCTGGGACTCCAAGAAGCACCGCTCGCGGGACCG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCACCACTGCCCCCGCTaGCACCTCCACTGCGGACCT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEHHCPR*HLHCGP
Trigger: AGGTCCGCAGTGGAGGTGGCAGCGGGGGCAGTGGTG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCGCCCCCTTGGTGCCTaGCGCCTGGCTGCAGCTATC +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERPLGA*RLAAAI
Trigger: GATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCGAGCGGTGCTTCTTaGAGTCCCAGGGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEASGAS*SPRARP
Trigger: CGGCCTCGCCCTGGGACTCCAAGAAGCACCGCTCGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGAAGGCGCCGACTCCTTaGGGGGCCGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEKAPTP*GAGPSW
Trigger: CCAAGAAGGCCCGGCCCCCCAAGGAGTCGGCGCCTT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCCCCAGCCTCCTCAGTaGCCTCCTCGGGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAPQPPQ*PPRAGR
Trigger: CCTTCCTGCCCGAGGAGGCCACTGAGGAGGCTGGGG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCCTGGATCAGCTCCTaGGCCTTCGCTCGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAAWISS*AFARLA
Trigger: GGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCAGGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGACCTCCCGCTTAGGTaGGGAGGCCGGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELADLPLR*GGRSRR
Trigger: TCTCCTGCTCCGGCCTCCTCACCTAAGCGGGAGGTC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGTTGGGTCAGGATCTTaGGGCGCAGGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAVGSGS*GAGPGR
Trigger: GCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAAC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCCGATCCTTCTGGCTaGTCTTGCCGCCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAADPSG*SCRPAP
Trigger: AGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCTAGGAACCTTGGCTaGCCGCTCCTCCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAARNLG*PLLPGP
Trigger: TGGTCCGGGGAGGAGCGGGCAGCCAAGGTTCCTAGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGGGGGTCCCCTGGCTTaGGACCGTGCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAGGPLA*DRACGS
Trigger: ACTTCCGCAAGCACGGTCGCAAGCCAGGGGACCCCC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTCCGGAGCAGGCGGTaGAGAGTAGGCCTCGTCGGT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALRSRR*RVGLVG
Trigger: ACCGACGAGGCCTACTCTCCACCGCCTGCTCCGGAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTCCCCGCTGATGAGCTaGGGTTGGAGCCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASPLMS*GWSRWA
Trigger: AGCCCACCGGCTCCAACCCCAGCTCATCAGCGGGGA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGGCTCCTCCTCCGGCTaGACGATCTCCCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEGSSSG*TISPSS
Trigger: CGAGGAAGGGGAGATCGTCCAGCCGGAGGAGGAGCC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCTTGCGTTCCCGCCTaGACTTCTTGCGCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEACVPA*TSCAWA
Trigger: CGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGCCCGGAGCTGCTTTaGCCATCTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELACPELL*PSQWGP
Trigger: GGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCCAGGACGCCGCTGGTaGTGCAGTCCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEPGRRW*CSPHQL
Trigger: CAGCTGGTGTGGACTGCACCACCAGCGGCGTCCTGG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGAGGCCAGGACGCCGCTaGTGGTGCAGTCCACACCAG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERPGRR*WCSPHQ
Trigger: CTGGTGTGGACTGCACCACCAGCGGCGTCCTGGCCT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTCTCTTGTCAGACGTaGCAGCCAGCCCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELSCQT*QPARWG
Trigger: CCCCCACCGGGCTGGCTGCCACGTCTGACAAGAGAG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGAGAGGTCGTGGTCCGTaGGGTCCTGGATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERGRGP*GPGWRV
Trigger: CACCCTCCATCCAGGACCTCACGGACCACGACCTCT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGCCTGCCGCCTGGCTaGAGCTATCCGCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELACLPPG*SYPPWT
Trigger: AGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGCTGTCCACGGTCTaGGAGTCCGGAGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELLSTV*ESGVRA
Trigger: TGCCCTCACTCCGGACTCGCAGACCGTGGACAGCAG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGTGCCCCCTGATTCCTaGGAACGGGGCTCTGACCGT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEVPPDS*ERGSDR
Trigger: ACGGTCAGAGCCCCGTTCCCAGGAATCAGGGGGCAC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTTCTTCAGCGACACCTaGCCACCACTGCCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEFFSDT*PPLPPL
Trigger: CAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTTGGTGCCTGCCGCCTaGCTGCAGCTATCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELVPAA*LQLSAL
Trigger: CAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGAAGGGAGGGGCACTaGGGACAGGCTTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARREGH*GQAWGQ
Trigger: TTGCCCCCAAGCCTGTCCCCAGTGCCCCTCCCTTCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTCTCCGAGATGCGGCTaGTGCTCTGGGACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEESPRCG*CSGTGL
Trigger: AAGGCCTGTCCCAGAGCATCAGCCGCATCTCGGAGA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTTCCCGACAAGCCTCTaGCTCGGTCCCCACCACGAA +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEFPTSL*LGPHHE
Trigger: TTCGTGGTGGGGACCGAGGCAGAGGCTTGTCGGGAA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGGCCCTCAGAGCTGCTaGTGCCCTCTCTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAGPQSC*CPLSCQ
Trigger: CTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCACGGCCCTCAGAGCTaGTGCTGCCCTCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAHGPQS*CCPLSC
Trigger: ACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCTTGCGACCGTGCTTaGGGAAGTAGCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAACDRA*GSSGSA
Trigger: AGCGCTACCGCTACTTCCGCAAGCACGGTCGCAAGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCATGCGGCTGATGCTCTaGGACAGGCCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAMRLML*DRPSSS
Trigger: GGAGGAGGAAGGCCTGTCCCAGAGCATCAGCCGCAT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGTGGCTTTCTGTGGCTaGGGATCTGGTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEVAFCG*GSGWWP
Trigger: AGGCCACCAACCAGATCCTCAGCCACAGAAAGCCAC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGGTCATCCCCAGACTTaGGGGTGGCTTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAGHPQT*GWLSVA
Trigger: AGCCACAGAAAGCCACCCTCAAGTCTGGGGATGACC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCTTCTTCTTCTTCTTaGTGCCGCCACCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEASSSS*CRHRPG
Trigger: ACCGGGACGGTGGCGGCAGCAAGAAGAAGAAGAAGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCACCGCCACCTTGGACTaGAGCTTCACCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELATATLD*SFTFRE
Trigger: TTCCCGGAAGGTGAAGCTGCAGTCCAAGGTGGCGGT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCCTCAGAGCTGCTGCTaGCCTCTCTCTTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAPQSCC*PLSCQT
Trigger: CGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCAGAAGGAGAAAGCGTaGGGTCTCTGTCTGGCGGAC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAQKEKA*GLCLAD
Trigger: GTCCGCCAGACAGAGACCCCACGCTTTCTCCTTCTG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGGGGTTGGAGCCGGTaGGCTCAAAAGGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAWGWSR*AQKGRT
Trigger: AGTACGACCCTTTTGAGCCCACCGGCTCCAACCCCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCATGGCGAAGAGGTCGTaGTCCGTGAGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAMAKRS*SVRSWM
Trigger: CATCCAGGACCTCACGGACCACGACCTCTTCGCCAT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTCAGCACCGCCACCTTaGACTGCAGCTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASAPPP*TAASPS
Trigger: GGAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCATCTGGTTGGTGGCCTaGATCAGCTCCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAIWLVA*ISSWAF
Trigger: GAAGGCCCAGGAGCTGATCCAGGCCACCAACCAGAT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGTGGCTGAGGATCTaGTTGGTGGCCTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELWLRI*LVAWIS
Trigger: GCTGATCCAGGCCACCAACCAGATCCTCAGCCACAG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGAGTTTCAAAGAGGTaGGGGGCGAAGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARVSKR*GAKSWP
Trigger: TGGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGAAAGGGTCGTACTTTTaGTCCGGAGCAGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEKGSYF*SGAGGG
Trigger: TCCACCGCCTGCTCCGGAGCAAAAGTACGACCCTTT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGTTGTCATCGTAGATaGCCGCCAGGGTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELACCHRR*PPGSPR
Trigger: TCTCGGAGACCCTGGCGGGCATCTACGATGACAACA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCGTGGGAGCCGGGCTTaGGGTCCCGCGAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERGSRA*GPASGA
Trigger: AGCACCGCTCGCGGGACCGCAAGCCCGGCTCCCACG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCTCCGCCCCCTTGGTaGCTGCCGCCTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPPPPW*LPPGCS
Trigger: GCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGACCTCAGGTGTCTTaGAGCTGCTGTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARPQVS*SCCPRS
Trigger: AGACCGTGGACAGCAGCTGCAAGACACCTGAGGTCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTTCCCACAGCCTGCTaGATGGCTCGCAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEELPTAC*MARRIK
Trigger: CTTTATCCTGCGAGCCATCCAGCAGGCTGTGGGAAG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCAGCCATCTTTATCATTaGGCAGGTCCCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASHLYH*AGPPAG
Trigger: CCCTGCAGGGGGACCTGCCCAATGATAAAGATGGCT...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTCCCCACTTTTGCTGTaGCAGATCTTGTGGACGGCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASPLLL*QILWTA
Trigger: GGCCGTCCACAAGATCTGCCACAGCAAAAGTGGGGA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCTGGGAACGGGGCTCTaGCCGTGGACTCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELGTGL*PWTPAA
Trigger: CGCTGCCGGAGTCCACGGTCAGAGCCCCGTTCCCAG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCCCAGTCATCCCACTaGCGGGGGAGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPQSSH*RGREVG
Trigger: CCCCACCTCCCTCCCCCGTCAGTGGGATGACTGGGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTCCCCTAGGTCCACCTaGAGGGCGCCCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESPRST*RAPSPS
Trigger: GGACGGCGAGGGCGCCCTGCAGGTGGACCTAGGGGA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCATCTTGAAGAGAAGTaGAGTCAAGGCCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAHLEEK*SQGQDA
Trigger: GGCGTCCTGGCCTTGACTGCACTTCTCTTCAAGATG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGGTCTTGGATGGCTTaGTCTTTCCCTTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAWSWMA*SFPWSP
Trigger: AGGGGACCAAGGGAAAGACCAAGCCATCCAAGACCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTGCAGCTATCCGCCTTaGACTTCTTCAGCGACACCT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEECSYPP*TSSATP
Trigger: AGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTCTCCTCCGCCCCCTTaGTGCCTGCCGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESPPPP*CLPPGC
Trigger: GCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGAGACACGGGAAGCTaGCCCGTCCTCCGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGDTGS*PVLRPR
Trigger: TCGGGGGCGGAGGACGGGCCAGCTTCCCGTGTCTCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCAGGTCCAGGCGGCTaGGAACCCAGGTATCCGGGG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREAGPGG*EPRYPG
Trigger: CCCCGGATACCTGGGTTCCCAGCCGCCTGGACCTGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCTTGGTCTTTCCCTTaGTCCCCTTGGTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAAWSFP*SPWFSW
Trigger: CCAAGAAAACCAAGGGGACCAAGGGAAAGACCAAGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGCGGACCTTTTTCCTaGTCTTGGATGGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELACGPFS*SWMAWS
Trigger: AGACCAAGCCATCCAAGACCAGGAAAAAGGTCCGCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCGTGTCAGTGCCCCCTaGTTCCTGGGAACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERVSAP*FLGTGL
Trigger: GAGCCCCGTTCCCAGGAATCAGGGGGCACTGACACG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGTGCCCAAGGTGAGGTaGCGGGCACAGGTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREVPKVR*RAQVGL
Trigger: TAGGCCCACCTGTGCCCGTCACCTCACCTTGGGCAC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTGGCTTCTTCCATCTTaGAGAGAAGTGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAWLLPS*REVQSR
Trigger: CCTTGACTGCACTTCTCTTCAAGATGGAAGAAGCCA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTCACCTTCACTGGGTTaGTTTCCCCACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WSHKYVQSFKEVRGEELASPSLG*FPHFCC
Trigger: ACAGCAAAAGTGGGGAAATCAACCCAGTGAAGGTGA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCTCGCCGCTGCGCTTaGGTTCCCGCCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPRRCA*VPAWTS
Trigger: AGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGAGTGCTTGGGGCGGCTaGAGCAGTGCTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESAWGG*SSAGGR
Trigger: ACGGCCACCAGCACTGCTGCAGCCGCCCCAAGCACT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGACGCCGCTGGTGGTaGAGTCCACACCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGRRWW*SPHQLA
Trigger: TGCCAGCTGGTGTGGACTGCACCACCAGCGGCGTCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCGTGGGGTCTCTGTCTaGCGGACCATCGCCCCGATC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERGVSV*RTIAPI
Trigger: GATCGGGGCGATGGTCCGCCAGACAGAGACCCCACG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGGGCCGGGCCTTCTTaGATGACCTGTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGAGPS*MTCPCP
Trigger: GGGACAGGGACAGGTCATCCAAGAAGGCCCGGCCCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTTTCCTGGTCTTGGATaGCTTGGTCTTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEFPGLG*LGLSLG
Trigger: ACCAAGGGAAAGACCAAGCCATCCAAGACCAGGAAA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCAGATTCCAGGGCATaGGCGGGGGCAACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREADSRA*AGATWA
Trigger: TGCCCACGTTGCCCCCGCCCATGCCCTGGAATCTGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCCGCTCGTCAGGTTTaGGGAAGGGGGAGCGACTCT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPARQV*GRGSDS
Trigger: AGAGTCGCTCCCCCTTCCTCAAACCTGACGAGCGGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGTGCTGCCCGGAGCTaGTTTGGCCATCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGAARS*FGHLSG
Trigger: CCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCATCTTCTTCCTCCATaGTCACCCCGCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREHLLPP*SPRRSG
Trigger: GCCCGAGCGGCGGGGTGACCATGGAGGAAGAAGATG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGGGCTCTCGTCACCTaGGAAGTCCTGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGALVT*EVLAQA
Trigger: AGCCTGAGCCAGGACTTCCCAGGTGACGAGAGCCCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGTTGCTCACCTTCACTaGGTTGATTTCCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEVAHLH*VDFPTF
Trigger: AAAAGTGGGGAAATCAACCCAGTGAAGGTGAGCAAC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCTCCACCGAGACCTTaGCTTCCCGACAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPPPRP*LPDKPL
Trigger: CAGAGGCTTGTCGGGAAGGCAAGGTCTCGGTGGAGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCGTCCGACTCCGCATaGAGGGACAAGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPSDSA*RDKKSS
Trigger: GGACGACTTCTTGTCCCTGCATGCGGAGTCGGACGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCTTTGGCCATCTCAGTaGGGGCCCGCTCGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELWPSQ*GPARQV
Trigger: AACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCAGTCCACACCAGCTaGCAGATTCCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREAVHTS*QIPGHG
Trigger: CCCATGCCCTGGAATCTGCCAGCTGGTGTGGACTGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCCCCTGCCTTGGCCTTaGCCTTGGTCTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREPLPWP*PWSFWA
Trigger: AGCCCAAAAAGACCAAGGTCAAGGCCAAGGCAGGGG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGAGCTTCCCACAGCCTaGTGGATGGCTCGCAGGATA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREELPTA*WMARRI
Trigger: TATCCTGCGAGCCATCCAGCAGGCTGTGGGAAGCTC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCAGGTGTCTTGCAGCTaGTGTCCACGGTCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREQVSCS*CPRSAS
Trigger: ACTCGCAGACCGTGGACAGCAGCTGCAAGACACCTG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCACAGGCAGAGGGATaGGATCTCTGTCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREAQAEG*DLCPRF
Trigger: GAATCGGGGACAGAGATCCCATCCCTCTGCCTGTGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCTGATGAGCTGGGGTTaGAGCCGGTGGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELMSWG*SRWAQK
Trigger: CTTTTGAGCCCACCGGCTCCAACCCCAGCTCATCAG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR TCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCGCCATCGAAGGCCATaGCACCGAGAGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERHRRP*HREPSL
Trigger: TAAAGATGGCTCTCGGTGTCATGGCCTTCGATGGCG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTCTTCTTCTTCTTGCTaGCGCCACCGTCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESSSSC*RHRPGV
Trigger: AACACCGGGACGGTGGCGGCAGCAAGAAGAAGAAGA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTCTTTTTGGGCTTGGTaGTGCCCGGAGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESFWAW*CPELLW
Trigger: CCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGTTTTCTTGGCCCCTaGCTTGGCCTTGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGFLGP*LGLDLG
Trigger: ACCAAGGTCAAGGCCAAGGCAGGGGCCAAGAAAACC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTCACCTGGGAAGTCCTaGCTCAGGCTGTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRESPGKS*LRLLSS
Trigger: CGATGACAACAGCCTGAGCCAGGACTTCCCAGGTGA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCTGTGGCAGATCTTGTaGACGGCCTTCCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELWQIL*TAFLRM
Trigger: CATCCTGAGGAAGGCCGTCCACAAGATCTGCCACAG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGAGGGAGGTGGGGAGGTaGAGCCATAAATACGTCCAG +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREREVGR*SHKYVQ
Trigger: CTGGACGTATTTATGGCTCCACCTCCCCACCTCCCT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR GCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCCCGCTCCTGCGTGTaGAGCTTCTTCAGATACTTA +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRREARSCV*SFFRYL
Trigger: TAAGTATCTGAAGAAGCTGCACACGCAGGAGCGGGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CCA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGAGAGGAGTTCGACTGTaGAGAAACCGTTTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERGVRL*RNRFAR
Trigger: ACGGGCAAAACGGTTTCTCCACAGTCGAACTCCTCT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp AGGGCGAGCGCTGGCGGTAGCGCTCCCGCCGTTGGGTCAGGATCTTaGGGCGCAGGTCCAGGCCGCCCCAGCGCGAGTCGGCGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: RASAGGSAPAVGSGS*GAGPGRPSASRRRA
Trigger: CGCCCGCCGCCGACTCGCGCTGGGGCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTACCGCCAGCGCTCGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp GAGCGGGAGCGGGAGCGGGAGCGGCGGCGGGCGGACGACGAGGCGTaGGAGCCGGGCTTGCGGTCCCGCGAGCGGTGCTTCTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ERERERERRRADDEA*EPGLRSRERCFLES
Trigger: GGACTCCAAGAAGCACCGCTCGCGGGACCGCAAGCCCGGCTCCCACGCCTCGTCGTCCGCCCGCCGCCGCTCCCGCTCCCGCTCCCGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp ACGAGGCGGCCTCCTTGGCCTCGCCGCTGCGCTTGCGTTCCCGCCTaGACTTCTTGCGCGTGGGCGGACCAGCAGCGGCGGCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: TRRPPWPRRCACVPA*TSCAWADQQRRPGR
Trigger: CCGCCCCGGCCGCCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp GAGTCGGCGGCGGGCGGCGCGGGAGCCGGCTCCCCTAGGTCCACCTaGAGGGCGCCCTCGCCGTCCGACTCCGCATGCAGGGACAAGAAG +
Preference number: 5 (lower is better)
Translates to: ESAAGGAGAGSPRST*RAPSPSDSACRDKK
Trigger: CTTCTTGTCCCTGCATGCGGAGTCGGACGGCGAGGGCGCCCTGCAGGTGGACCTAGGGGAGCCGGCTCCCGCGCCGCCCGCCGCCGACTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp CGGGCGGCGCTGGCTGGGTGCCCGACGAGGACGAGGCGGCCTCCTTaGCCTCGCCGCTGCGCTTGCGTTCCCGCCTGGACTTCTTGCGCG +
Preference number: 5 (lower is better)
Translates to: RAALAGCPTRTRRPP*PRRCACVPAWTSCA
Trigger: CGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCACCCAGCCAGCGCCGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp AAGACCCGCCGGCGCATGGCTCCATCAGCCCGGGTGGAGTCCACCTaGGGCGGCGTTCCAGGGGCGGGAGTCGGCTGTGTGGGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: KTRRRMAPSARVEST*GGVPGAGVGCVGCA
Trigger: CGCGCAGCCCACACAGCCGACTCCCGCCCCTGGAACGCCGCCCCAGGTGGACTCCACCCGGGCTGATGGAGCCATGCGCCGGCGGGTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp TGCCCGACGAGGACGAGGCGGCCTCCTTGGCCTCGCCGCTGCGCTTaGGTTCCCGCCTGGACTTCTTGCGCGTGGGCGGACCAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: CPTRTRRPPWPRRCA*VPAWTSCAWADQQR
Trigger: CCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp GCTGGGTGCCCGACGAGGACGAGGCGGCCTCCTTGGCCTCGCCGCTaGGCTTGCGTTCCCGCCTGGACTTCTTGCGCGTGGGCGGACCAG +
Preference number: 5 (lower is better)
Translates to: AGCPTRTRRPPWPRR*ACVPAWTSCAWADQ
Trigger: CTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCACCCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp AGGAGGAGGAGGAGGCGGCCCCCGAGCGGCGCCGATCCTTCTGGCTaGTCTTGCCGCCCCGCTCCTCGCCGCTCAGTCCCTCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: RRRRRRPPSGADPSG*SCRPAPRRSVPRSR
Trigger: ACGACTCCGAGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp CCGGGGCGGAAGAGGGACAGCGCCAGCCTGGGCTCCTCCTCCGGCTaGACGATCTCCCCTTCCTCGATCTCCGAGTCGCCGGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGRKRDSASLGSSSG*TISPSSISESPGGS
Trigger: GCTGCCGCCCGGCGACTCGGAGATCGAGGAAGGGGAGATCGTCCAGCCGGAGGAGGAGCCCAGGCTGGCGCTGTCCCTCTTCCGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp AGGAGGAGGCGGCCCCCGAGCGGCGCCGATCCTTCTGGCTGCTCTTaGCGCCCCGCTCCTCGCCGCTCAGTCCCTCGGAGTCGTACAGGA +
Preference number: 5 (lower is better)
Translates to: RRRRPPSGADPSGCS*RPAPRRSVPRSRTG
Trigger: TCCTGTACGACTCCGAGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCGCCTCCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp AGTCCACACCAGCTGGCAGATTCCAGGGCATGGGCGGGGGCAACGTaGGCAGCTGGGAGACACGGGAAGCTGGCCCGTCCTCCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SPHQLADSRAWAGAT*AAGRHGKLARPPPP
Trigger: CGGGGGCGGAGGACGGGCCAGCTTCCCGTGTCTCCCAGCTGCCCACGTTGCCCCCGCCCATGCCCTGGAATCTGCCAGCTGGTGTGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp CCTCCGCCCCCTTGGTGCCTGCCGCCTGGCTGCAGCTATCCGCCTTaGACTTCTTCAGCGACACCTGGCCACCACTGCCCCCGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PPPPWCLPPGCSYPP*TSSATPGHHCPRCH
Trigger: GTGGCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp CGCCGCTGGTGGTGCAGTCCACACCAGCTGGCAGATTCCAGGGCATaGGCGGGGGCAACGTGGGCAGCTGGGAGACACGGGAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RRWWCSPHQLADSRA*AGATWAAGRHGKLA
Trigger: GGCCAGCTTCCCGTGTCTCCCAGCTGCCCACGTTGCCCCCGCCCATGCCCTGGAATCTGCCAGCTGGTGTGGACTGCACCACCAGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 90 bp AGCCCAGGCCGGCTGACGCGGCATCCTTGGCCGGGGTGGTGCTGCTaGCACCCTCGCGGATCAGCACCGCCACCTTGGACTGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SPGRLTRHPWPGWCC*HPRGSAPPPWTAAS
Trigger: TGAAGCTGCAGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 90 bp CTCGCGGTCACGGCTGAATTTGACGCCAATGGAGCCCAGGCCGGCTaGCGCGGCATCCTTGGCCGGGGTGGTGCTGCTGACACCCTCGCG +
Preference number: 5 (lower is better)
Translates to: LAVTAEFDANGAQAG*RGILGRGGAADTLA
Trigger: CGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAGCCGTGACCGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp AGCGGTCACCACCTCCACCGAGACCTTGCCTTCCCGACAAGCCTCTaGCTCGGTCCCCACCACGAAGACCCGCCGGCGCATGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SGHHLHRDLAFPTSL*LGPHHEDPPAHGSI
Trigger: GATGGAGCCATGCGCCGGCGGGTCTTCGTGGTGGGGACCGAGGCAGAGGCTTGTCGGGAAGGCAAGGTCTCGGTGGAGGTGGTGACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp TTCTTCTTCTTCTTGCTGCCGCCACCGTCCCGGTGTTTCCCGCGGTaGCGCTCGCGCCTCGAGGACGACGATGAGGAAGTGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: FFFFLLPPPSRCFPR*RSRLEDDDEEVAGG
Trigger: GCCCCCGGCCACTTCCTCATCGTCGTCCTCGAGGCGCGAGCGGCACCGCGGGAAACACCGGGACGGTGGCGGCAGCAAGAAGAAGAAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp CGGACCAGGAAGTCTCCTCCGCCCCCTTGGTGCCTGCCGCCTGGCTaGAGCTATCCGCCTTGGACTTCTTCAGCGACACCTGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RTRKSPPPPWCLPPG*SYPPWTSSATPGHH
Trigger: GTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp TCCCCGGACCAGGAAGTCTCCTCCGCCCCCTTGGTGCCTGCCGCCTaGCTGCAGCTATCCGCCTTGGACTTCTTCAGCGACACCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SPDQEVSSAPLVPAA*LQLSALDFFSDTWP
Trigger: TGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTGGTCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 90 bp GGGAAGAACAGGAGGACGACGAGGATGAAGAGCCTGAGCCGCTGCTaGCTGGTGGCTTTGGCGGGGGCCCTGAGGAAGGCGCCGACTCCT +
Preference number: 5 (lower is better)
Translates to: GKNRRTTRMKSLSRC*LVALAGALRKAPTP
Trigger: AGGAGTCGGCGCCTTCCTCAGGGCCCCCGCCAAAGCCACCAGTCAGCAGCGGCTCAGGCTCTTCATCCTCGTCGTCCTCCTGTTCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp GTGGCCATGTCCAACACAGTAGCCGTGTCAGTGCCCCCTGATTCCTaGGAACGGGGCTCTGACCGTGGACTCCGGCAGCGCCGCCATCGA +
Preference number: 5 (lower is better)
Translates to: VAMSNTVAVSVPPDS*ERGSDRGLRQRRHR
Trigger: TCGATGGCGGCGCTGCCGGAGTCCACGGTCAGAGCCCCGTTCCCAGGAATCAGGGGGCACTGACACGGCTACTGTGTTGGACATGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360565.8
ENST00000598359.5
ENST00000601038.5
CDS CCA 90 bp CCATGTCCAACACTCACAGTAGCCGTGTCAGTGCCCCCTGATTCCTaGGAACGGGGCTCTGACCGTGGACTCCGGCAGCGCCGCCATCGA +
Preference number: 5 (lower is better)
Translates to: PCPTLTVAVSVPPDS*ERGSDRGLRQRRHR
Trigger: TCGATGGCGGCGCTGCCGGAGTCCACGGTCAGAGCCCCGTTCCCAGGAATCAGGGGGCACTGACACGGCTACTGTGAGTGTTGGACATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595242.3
CDS GCA 90 bp GCTGGGAACCCAGGTATCCGGGGGATCCAGGACACTCACCAGCCCTaGGAGGAAGCTGTCCGTGGCCATGTCCAACACAGTAGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: AGNPGIRGIQDTHQP*EEAVRGHVQHSSRV
Trigger: GACACGGCTACTGTGTTGGACATGGCCACGGACAGCTTCCTCGCAGGGCTGGTGAGTGTCCTGGATCCCCCGGATACCTGGGTTCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360565.8
ENST00000598359.5
CDS GCA 90 bp CCGCCTTGGACTTCTTCAGCGACACCTGGCCACCACTGCCCCCGCTaGCACCTCCACTGCGGACCTTTTTCCTGGTCTTGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: PPWTSSATPGHHCPR*HLHCGPFSWSWMAW
Trigger: CCAAGCCATCCAAGACCAGGAAAAAGGTCCGCAGTGGAGGTGGCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp TCTTCAGATACTTATCTGTGTCCCCACGGCCCTCAGAGCTGCTGCTaGCCTCTCTCTTGTCAGACGTGGCAGCCAGCCCGGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SSDTYLCPHGPQSCC*PLSCQTWQPARWGW
Trigger: CCACCCCCACCGGGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATCTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp GCTTCTTCAGATACTTATCTGTGTCCCCACGGCCCTCAGAGCTGCTaGTGCCCTCTCTCTTGTCAGACGTGGCAGCCAGCCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ASSDTYLCPHGPQSC*CPLSCQTWQPARWG
Trigger: CCCCCACCGGGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATCTGAAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp GTGGTGCTGCTGACACCCTCGCGGATCAGCACCGCCACCTTGGACTaGAGCTTCACCTTCCGGGAAGAACAGGAGGACGACGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: VVLLTPSRISTATLD*SFTFREEQEDDEDE
Trigger: TTCATCCTCGTCGTCCTCCTGTTCTTCCCGGAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp GCAGCTTCTTCAGATACTTATCTGTGTCCCCACGGCCCTCAGAGCTaGTGCTGCCCTCTCTCTTGTCAGACGTGGCAGCCAGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: AASSDTYLCPHGPQS*CCPLSCQTWQPARW
Trigger: CCACCGGGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATCTGAAGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCCTCGCCGCTGCGCTaGCGTTCCCGCCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEASPLR*RSRLDF
Trigger: GAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCGCGAGCGGTGCTTCTaGGAGTCCCAGGGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARERCF*ESQGEA
Trigger: GGCCTCGCCCTGGGACTCCAAGAAGCACCGCTCGCG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCCTCGGGGGTCGGACTaGTCAAGCCGGCCCACCGTG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAPRGSD*SSRPTV
Trigger: CACGGTGGGCCGGCTTGACAAGTCCGACCCCCGAGG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCTGACGCGGCATCCTaGGCCGGGGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEADAAS*AGVVLL
Trigger: CAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGGGGTGCTAGGAACCTaGGCTGCCCGCTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAGVLGT*AARSSP
Trigger: CGGGGAGGAGCGGGCAGCCAAGGTTCCTAGCACCCC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 90 bp CTTGGCCTTGACCTTGGTCTTTTTGGGCTTGGTGCTGCCCGGAGCTaGTTTGGCCATCTCAGTGGGGGCCCGCTCGTCAGGTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LGLDLGLFGLGAARS*FGHLSGGPLVRFEE
Trigger: TTCCTCAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTCAAGGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 90 bp GGCTTTCTGTGGCTGAGGATCTGGTTGGTGGCCTGGATCAGCTCCTaGGCCTTCGCTCGGCTCGCCAGGTTGGCTTCTTCCATCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GFLWLRIWLVAWISS*AFARLARLASSILK
Trigger: CTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCAGGCCACCAACCAGATCCTCAGCCACAGAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGTAGCGCTCCCGCCGTaGGGTCAGGATCTTGCGGCG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAVALPP*GQDLAA
Trigger: CGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTAC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTGCCCGGAGCTGCTTaGGCCATCTCAGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALPGAA*AISVGA
Trigger: GGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCCCGCTCGTCAGGTTaGAGGAAGGGGGAGCGACTC +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAARSSG*RKGERL
Trigger: GAGTCGCTCCCCCTTCCTCAAACCTGACGAGCGGGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCGCTTCTTCTTCTTCTaGCTGCCGCCACCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEERFFFF*LPPPSR
Trigger: CCGGGACGGTGGCGGCAGCAAGAAGAAGAAGAAGCG...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTGCTGCCCTCTCTCTaGTCAGACGTGGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALLPSL*SDVAAS
Trigger: GCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTGTGGAGAAACCGTTTaGCCCGTCCTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEECGETV*PVLQAL
Trigger: CAGGGCCTGGAGGACGGGCAAAACGGTTTCTCCACA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCTGATGAGCTGGGGTaGGAGCCGGTGGGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAADELG*EPVGSK
Trigger: TTTTGAGCCCACCGGCTCCAACCCCAGCTCATCAGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGACCGTGATGGTCCGCTaGATGGCGAAGAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEETVMVR*MAKRSW
Trigger: CCACGACCTCTTCGCCATCAAGCGGACCATCACGGT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCGGTCACGGCTGAATTaGACGCCAATGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELARSRLN*TPMEPR
Trigger: CCTGGGCTCCATTGGCGTCAAATTCAGCCGTGACCG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGGCCCCTGCCTTGGCCTaGACCTTGGTCTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEAPALA*TLVFLG
Trigger: GCCCAAAAAGACCAAGGTCAAGGCCAAGGCAGGGGC...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGTGGCTGAGGATCTGGTaGGTGGCCTGGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEWLRIW*VAWISS
Trigger: GGAGCTGATCCAGGCCACCAACCAGATCCTCAGCCA...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp GGGAGGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGATCAGCACCGCCACCTaGGACTGCAGCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: GRWSHKYVQSFKEVRGEEISTAT*DCSFTF
Trigger: GAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGAT...CTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCCTGGTCTTGGATGGCTaGGTCTTTCCCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALVLDG*VFPLVP
Trigger: GGGGACCAAGGGAAAGACCAAGCCATCCAAGACCAG...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCTCGGCTCGCCAGGTaGGCTTCTTCCATCTTGAAG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAARLAR*ASSILK
Trigger: CTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTTGCTGTGGCAGATCTaGTGGACGGCCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELALLWQI*WTAFLR
Trigger: CCTGAGGAAGGCCGTCCACAAGATCTGCCACAGCAA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGACGAGGCGGCCTCCTaGGCCTCGCCGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREDEAAS*ASPLRL
Trigger: CAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCGCCTTGGCCTTGACCTaGGTCTTTTTGGGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAALALT*VFLGLV
Trigger: CACCAAGCCCAAAAAGACCAAGGTCAAGGCCAAGGC...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp TGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTGAGGGGCGAAGAGCTGGCCTTCTTGGCCCCTGCCTaGGCCTTGACCTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: WSHKYVQSFKEVRGEELAFLAPA*ALTLVF
Trigger: AAAGACCAAGGTCAAGGCCAAGGCAGGGGCCAAGAA...GGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCGTTGGGTCAGGATCTaGCGGCGCAGGTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRRERWVRI*RRRSRP
Trigger: CGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGGGGCCGGGCCTTCTaGGATGACCTGTCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGGRAF*DDLSLS
Trigger: GGACAGGGACAGGTCATCCAAGAAGGCCCGGCCCCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGCACTGGGGACAGGCTaGGGGGCAAGGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREALGTG*GAREVD
Trigger: GTCCACCTCCCTTGCCCCCAAGCCTGTCCCCAGTGC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGACCTCCACCGAGACCTaGCCTTCCCGACAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRRETSTET*PSRQAS
Trigger: AGAGGCTTGTCGGGAAGGCAAGGTCTCGGTGGAGGT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGGGTCATCCCCAGACTaGAGGGTGGCTTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREGSSPD*RVAFCG
Trigger: GCCACAGAAAGCCACCCTCAAGTCTGGGGATGACCC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGGAGCCATCTTTATCATaGGGCAGGTCCCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREEPSLS*GRSPCR
Trigger: CCTGCAGGGGGACCTGCCCAATGATAAAGATGGCTC...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGAAAAGGGTCGTACTTTaGCTCCGGAGCAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREKRVVL*LRSRRW
Trigger: CCACCGCCTGCTCCGGAGCAAAAGTACGACCCTTTT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGCTGCAGCTATCCGCCTaGGACTTCTTCAGCGACACC +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELQLSA*DFFSDT
Trigger: GGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAG...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGTTGACCTTGGTCTTTTaGGGCTTGGTGCTGCCCGGA +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRRELTLVF*GLVLPG
Trigger: TCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTCAA...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS-3UTR CAA 90 bp ATGTTTCATGAAATCTTTAATGAAATTGGGGAGAGGGGCACAAACAGAAGGGAGAAATCTTTAATGAAATaGGGGAGAGGGGCACAAACA +
Preference number: 5 (lower is better)
Translates to: MFHEIFNEIGERGTNRREKSLMK*GRGAQT
Trigger: TGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTT...CTCCCTTCTGTTTGTGCCCCTCTCCCCAATTTCATTAAAGATTTCATGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp CGCGGGCGCCGGGGAGGGCGAGCGCTGGCGGTAGCGCTCCCGCCGTaGGGTCAGGATCTTGCGGCGCAGGTCCAGGCCGCCCCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: RGRRGGRALAVALPP*GQDLAAQVQAAPAR
Trigger: TCGCGCTGGGGCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTACCGCCAGCGCTCGCCCTCCCCGGCGCCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp GCGGGCGGCGCGGGAGCCGGCTCCCCTAGGTCCACCTaGAGGGCGCCCTCGCCGTCCGACTCCGCATGCAGG +
Preference number: 6 (lower is better)
Translates to: AGGAGAGSPRST*RAPSPSDSACR
Trigger: CCTGCATGCGGAGTCGGACGGCGAGGGCGCCCTGCAGGTGGACCTAGGGGAGCCGGCTCCCGCGCCGCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CCTCGCCGCTGCGCTTGCGTTCCCGCCTGGACTTCTTaGGCGTGGGCGGACCAGCAGCGGCGGCCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: PRRCACVPAWTS*AWADQQRRPGR
Trigger: CCGCCCCGGCCGCCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp GCCTCGCCGCTGCGCTTGCGTTCCCGCCTGGACTTCTaGCGCGTGGGCGGACCAGCAGCGGCGGCCGGGGCG +
Preference number: 6 (lower is better)
Translates to: ASPLRLRSRLDF*RVGGPAAAAGA
Trigger: CGCCCCGGCCGCCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp GCGGGCGGCGCTGGCTGGGTGCCCGACGAGGACGAGGCGGCCTCCTaGGCCTCGCCGCTGCGCTTGCGTTCCCGCCTGGACTTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: AGGAGWVPDEDEAAS*ASPLRLRSRLDFLR
Trigger: GCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCACCCAGCCAGCGCCGCCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp GGCGGCGTTCCAGGGGCGGGAGTCGGCTGTGTGGGCTaGGCGTCCGGGCGGGGGCTCTCGTCACCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GGVPGAGVGCVG*ASGRGLSSPGK
Trigger: CTTCCCAGGTGACGAGAGCCCCCGCCCGGACGCGCAGCCCACACAGCCGACTCCCGCCCCTGGAACGCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp CGGGGAGGGCGAGCGCTGGCGGTAGCGCTCCCGCCGTaGGGTCAGGATCTTGCGGCGCAGGTCCAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RGGRALAVALPP*GQDLAAQVQAA
Trigger: GGCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTACCGCCAGCGCTCGCCCTCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp GCTGGCGGTAGCGCTCCCGCCGTTGGGTCAGGATCTTaGGGCGCAGGTCCAGGCCGCCCCAGCGCGAGTCGG +
Preference number: 6 (lower is better)
Translates to: AGGSAPAVGSGS*GAGPGRPSASR
Trigger: CCGACTCGCGCTGGGGCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTACCGCCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CGGCCCCCGAGCGGCGCCGATCCTTCTGGCTGCTCTTaGCGCCCCGCTCCTCGCCGCTCAGTCCCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: RPPSGADPSGCS*RPAPRRSVPRS
Trigger: ACTCCGAGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp AGGAGGCGGCCCCCGAGCGGCGCCGATCCTTCTGGCTaGTCTTGCCGCCCCGCTCCTCGCCGCTCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: RRRPPSGADPSG*SCRPAPRRSVP
Trigger: AGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCGCCTCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CCCGGCCGCCGGGGCGGAAGAGGGACAGCGCCAGCCTaGGCTCCTCCTCCGGCTGGACGATCTCCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: PGRRGGRGTAPA*APPPAGRSPLP
Trigger: AGGAAGGGGAGATCGTCCAGCCGGAGGAGGAGCCCAGGCTGGCGCTGTCCCTCTTCCGCCCCGGCGGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp GAGGAGGAGGCGGCCCCCGAGCGGCGCCGATCCTTCTaGCTGCTCTTGCCGCCCCGCTCCTCGCCGCTCAGT +
Preference number: 6 (lower is better)
Translates to: EEEAAPERRRSF*LLLPPRSSPLS
Trigger: ACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCGCCTCCTCCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp TCCACCTGCAGGGCGCCCTCGCCGTCCGACTCCGCATaGAGGGACAAGAAGTCGTCCCCCTCGGGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: STCRAPSPSDSA*RDKKSSPSGAR
Trigger: GCGGGCCCCCGAGGGGGACGACTTCTTGTCCCTGCATGCGGAGTCGGACGGCGAGGGCGCCCTGCAGGTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CGGCGCATGGCTCCATCAGCCCGGGTGGAGTCCACCTaGGGCGGCGTTCCAGGGGCGGGAGTCGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RRMAPSARVEST*GGVPGAGVGCV
Trigger: CACACAGCCGACTCCCGCCCCTGGAACGCCGCCCCAGGTGGACTCCACCCGGGCTGATGGAGCCATGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CCTCCTTGGCCTCGCCGCTGCGCTTGCGTTCCCGCCTaGACTTCTTGCGCGTGGGCGGACCAGCAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PPWPRRCACVPA*TSCAWADQQRR
Trigger: CCGCCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CTGGCTGGGTGCCCGACGAGGACGAGGCGGCCTCCTTaGCCTCGCCGCTGCGCTTGCGTTCCCGCCTGGACT +
Preference number: 6 (lower is better)
Translates to: LAGCPTRTRRPP*PRRCACVPAWT
Trigger: AGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCACCCAGCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CGGGGGCAACGTGGGCAGCTGGGAGACACGGGAAGCTaGCCCGTCCTCCGCCCCCGAGTCACCGGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: RGQRGQLGDTGS*PVLRPRVTGCG
Trigger: TCCACAGCCGGTGACTCGGGGGCGGAGGACGGGCCAGCTTCCCGTGTCTCCCAGCTGCCCACGTTGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp GTGCCCGACGAGGACGAGGCGGCCTCCTTGGCCTCGCCGCTGCGCTaGCGTTCCCGCCTGGACTTCTTGCGCGTGGGCGGACCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: VPDEDEAASLASPLR*RSRLDFLRVGGPAA
Trigger: CGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp AGGACGAGGCGGCCTCCTTGGCCTCGCCGCTGCGCTTaGGTTCCCGCCTGGACTTCTTGCGCGTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: RTRRPPWPRRCA*VPAWTSCAWAD
Trigger: GTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CCGACGAGGACGAGGCGGCCTCCTTGGCCTCGCCGCTaGGCTTGCGTTCCCGCCTGGACTTCTTGCGCGTGG +
Preference number: 6 (lower is better)
Translates to: PTRTRRPPWPRR*ACVPAWTSCAW
Trigger: CCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp GGCCAGGACGCCGCTGGTGGTGCAGTCCACACCAGCTaGCAGATTCCAGGGCATGGGCGGGGGCAACGTGGG +
Preference number: 6 (lower is better)
Translates to: GQDAAGGAVHTS*QIPGHGRGQRG
Trigger: CCCACGTTGCCCCCGCCCATGCCCTGGAATCTGCCAGCTGGTGTGGACTGCACCACCAGCGGCGTCCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp ACGCCAATGGAGCCCAGGCCGGCTGACGCGGCATCCTaGGCCGGGGTGGTGCTGCTGACACCCTCGCGGATC +
Preference number: 6 (lower is better)
Translates to: TPMEPRPADAAS*AGVVLLTPSRI
Trigger: GATCCGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp TCCTCCGCCCCCTTGGTGCCTGCCGCCTGGCTGCAGCTATCCGCCTaGGACTTCTTCAGCGACACCTGGCCACCACTGCCCCCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SSAPLVPAAWLQLSA*DFFSDTWPPLPPLP
Trigger: TGGCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 72 bp GGGGCAGGGCCCCCGTCTCCCGTGCCCAAGGTGAGGTaGCGGGCACAGGTGGGCCTAGAGGAGTTCGACTGT +
Preference number: 6 (lower is better)
Translates to: GAGPPSPVPKVR*RAQVGLEEFDC
Trigger: ACAGTCGAACTCCTCTAGGCCCACCTGTGCCCGTCACCTCACCTTGGGCACGGGAGACGGGGGCCCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360565.8
ENST00000598359.5
CDS TCA 72 bp CGGCTGACGCGGCATCCTTGGCCGGGGTGGTGCTGCTaGCACCCTCGCGGATCAGCACCGCCACCTTGGACT +
Preference number: 6 (lower is better)
Translates to: RLTRHPWPGWCC*HPRGSAPPPWT
Trigger: AGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CCTCCCCGGACCAGGAAGTCTCCTCCGCCCCCTTGGTaGCTGCCGCCTGGCTGCAGCTATCCGCCTTGGACT +
Preference number: 6 (lower is better)
Translates to: PPRTRKSPPPPW*LPPGCSYPPWT
Trigger: AGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTGGTCCGGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp CTGAATTTGACGCCAATGGAGCCCAGGCCGGCTGACGCGGCATCCTaGGCCGGGGTGGTGCTGCTGACACCCTCGCGGATCAGCACCGCC +
Preference number: 6 (lower is better)
Translates to: LNLTPMEPRPADAAS*AGVVLLTPSRISTA
Trigger: GGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CACCTCCACCGAGACCTTGCCTTCCCGACAAGCCTCTaGCTCGGTCCCCACCACGAAGACCCGCCGGCGCAT +
Preference number: 6 (lower is better)
Translates to: HLHRDLAFPTSL*LGPHHEDPPAH
Trigger: ATGCGCCGGCGGGTCTTCGTGGTGGGGACCGAGGCAGAGGCTTGTCGGGAAGGCAAGGTCTCGGTGGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp AAGAGGGACAGCGCCAGCCTGGGCTCCTCCTCCGGCTaGACGATCTCCCCTTCCTCGATCTCCGAGTCGCCG +
Preference number: 6 (lower is better)
Translates to: KRDSASLGSSSG*TISPSSISESP
Trigger: CGGCGACTCGGAGATCGAGGAAGGGGAGATCGTCCAGCCGGAGGAGGAGCCCAGGCTGGCGCTGTCCCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp TGGTGCAGTCCACACCAGCTGGCAGATTCCAGGGCATaGGCGGGGGCAACGTGGGCAGCTGGGAGACACGGG +
Preference number: 6 (lower is better)
Translates to: WCSPHQLADSRA*AGATWAAGRHG
Trigger: CCCGTGTCTCCCAGCTGCCCACGTTGCCCCCGCCCATGCCCTGGAATCTGCCAGCTGGTGTGGACTGCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 72 bp AGGAGGACGACGAGGATGAAGAGCCTGAGCCGCTGCTaGCTGGTGGCTTTGGCGGGGGCCCTGAGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: RRTTRMKSLSRC*LVALAGALRKA
Trigger: CGCCTTCCTCAGGGCCCCCGCCAAAGCCACCAGTCAGCAGCGGCTCAGGCTCTTCATCCTCGTCGTCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 72 bp ACGGCTGAATTTGACGCCAATGGAGCCCAGGCCGGCTaGCGCGGCATCCTTGGCCGGGGTGGTGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: TAEFDANGAQAG*RGILGRGGAAD
Trigger: GTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp CCCGGACCAGGAAGTCTCCTCCGCCCCCTTGGTGCCTaGCGCCTGGCTGCAGCTATCCGCCTTGGACTTCTT +
Preference number: 6 (lower is better)
Translates to: PGPGSLLRPLGA*RLAAAIRLGLL
Trigger: AAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTGGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CCTTGGTGCCTGCCGCCTGGCTGCAGCTATCCGCCTTaGACTTCTTCAGCGACACCTGGCCACCACTGCCCC +
Preference number: 6 (lower is better)
Translates to: PWCLPPGCSYPP*TSSATPGHHCP
Trigger: GGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp AGGAAGGGGGAGCGACTCTCGCGGTCACGGCTGAATTaGACGCCAATGGAGCCCAGGCCGGCTGACGCGGCA +
Preference number: 6 (lower is better)
Translates to: RKGERLSRSRLN*TPMEPRPADAA
Trigger: TGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAGCCGTGACCGCGAGAGTCGCTCCCCCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp GCTTTGGCCATCTCAGTGGGGGCCCGCTCGTCAGGTTaGAGGAAGGGGGAGCGACTCTCGCGGTCACGGCTG +
Preference number: 6 (lower is better)
Translates to: ALAISVGARSSG*RKGERLSRSRL
Trigger: CAGCCGTGACCGCGAGAGTCGCTCCCCCTTCCTCAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp CCCTTGGTGCCTGCCGCCTGGCTGCAGCTATCCGCCTaGGACTTCTTCAGCGACACCTGGCCACCACTGCCC +
Preference number: 6 (lower is better)
Translates to: PLVPAAWLQLSA*DFFSDTWPPLP
Trigger: GGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp CCTCGGGGGTCGGACTTGTCAAGCCGGCCCACCGTGATGGTCCGCTaGATGGCGAAGAGGTCGTGGTCCGTGAGGTCCTGGATGGAGGGT +
Preference number: 6 (lower is better)
Translates to: PRGSDLSSRPTVMVR*MAKRSWSVRSWMEG
Trigger: ACCCTCCATCCAGGACCTCACGGACCACGACCTCTTCGCCATCAAGCGGACCATCACGGTGGGCCGGCTTGACAAGTCCGACCCCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp GCCGGGGTGGTGCTGCTGACACCCTCGCGGATCAGCACCGCCACCTaGGACTGCAGCTTCACCTTCCGGGAAGAACAGGAGGACGACGAG +
Preference number: 6 (lower is better)
Translates to: AGVVLLTPSRISTAT*DCSFTFREEQEDDE
Trigger: CTCGTCGTCCTCCTGTTCTTCCCGGAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp TCCAACACAGTAGCCGTGTCAGTGCCCCCTGATTCCTaGGAACGGGGCTCTGACCGTGGACTCCGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: SNTVAVSVPPDS*ERGSDRGLRQR
Trigger: GCGCTGCCGGAGTCCACGGTCAGAGCCCCGTTCCCAGGAATCAGGGGGCACTGACACGGCTACTGTGTTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360565.8
ENST00000598359.5
ENST00000601038.5
CDS CCA 72 bp TGTCCTCACTTTCGCCAGGCCGCAGGTCCAGGCGGCTaGGAACCCAGGTATCCGGGGGATCCAGGACACTCA +
Preference number: 6 (lower is better)
Translates to: CPHFRQAAGPGG*EPRYPGDPGHS
Trigger: TGAGTGTCCTGGATCCCCCGGATACCTGGGTTCCCAGCCGCCTGGACCTGCGGCCTGGCGAAAGTGAGGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360565.8
ENST00000598359.5
CDS CCA 72 bp TGTGGGCTGCGCGTCCGGGCGGGGGCTCTCGTCACCTaGGAAGTCCTGGCTCAGGCTGTTGTCATCGTAGAT +
Preference number: 6 (lower is better)
Translates to: CGLRVRAGALVT*EVLAQAVVIVD
Trigger: ATCTACGATGACAACAGCCTGAGCCAGGACTTCCCAGGTGACGAGAGCCCCCGCCCGGACGCGCAGCCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CAGGAAGTCTCCTCCGCCCCCTTGGTGCCTGCCGCCTaGCTGCAGCTATCCGCCTTGGACTTCTTCAGCGAC +
Preference number: 6 (lower is better)
Translates to: QEVSSAPLVPAA*LQLSALDFFSD
Trigger: GTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp TCAGGTTTGAGGAAGGGGGAGCGACTCTCGCGGTCACGGCTGAATTaGACGCCAATGGAGCCCAGGCCGGCTGACGCGGCATCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SGLRKGERLSRSRLN*TPMEPRPADAASLA
Trigger: GGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAGCCGTGACCGCGAGAGTCGCTCCCCCTTCCTCAAACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp CCCGGAGCTGCTTTGGCCATCTCAGTGGGGGCCCGCTCGTCAGGTTaGAGGAAGGGGGAGCGACTCTCGCGGTCACGGCTGAATTTGACG +
Preference number: 6 (lower is better)
Translates to: PGAALAISVGARSSG*RKGERLSRSRLNLT
Trigger: CGTCAAATTCAGCCGTGACCGCGAGAGTCGCTCCCCCTTCCTCAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp GACCTTGGTCTTTTTGGGCTTGGTGCTGCCCGGAGCTaGTTTGGCCATCTCAGTGGGGGCCCGCTCGTCAGG +
Preference number: 6 (lower is better)
Translates to: DLGLFGLGAARS*FGHLSGGPLVR
Trigger: CCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp AAGTCTCCTCCGCCCCCTTGGTGCCTGCCGCCTGGCTaGAGCTATCCGCCTTGGACTTCTTCAGCGACACCT +
Preference number: 6 (lower is better)
Translates to: KSPPPPWCLPPG*SYPPWTSSATP
Trigger: AGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp ACTTATCTGTGTCCCCACGGCCCTCAGAGCTGCTGCTaGCCTCTCTCTTGTCAGACGTGGCAGCCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: TYLCPHGPQSCC*PLSCQTWQPAR
Trigger: CCGGGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp TGGCTGAGGATCTGGTTGGTGGCCTGGATCAGCTCCTaGGCCTTCGCTCGGCTCGCCAGGTTGGCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: WLRIWLVAWISS*AFARLARLASS
Trigger: GGAAGAAGCCAACCTGGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCAGGCCACCAACCAGATCCTCAGCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp TCGGACTTGTCAAGCCGGCCCACCGTGATGGTCCGCTaGATGGCGAAGAGGTCGTGGTCCGTGAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SDLSSRPTVMVR*MAKRSWSVRSW
Trigger: CCAGGACCTCACGGACCACGACCTCTTCGCCATCAAGCGGACCATCACGGTGGGCCGGCTTGACAAGTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp GCCTTGACCTTGGTCTTTTTGGGCTTGGTGCTGCCCGGAGCTGCTTaGGCCATCTCAGTGGGGGCCCGCTCGTCAGGTTTGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: ALTLVFLGLVLPGAA*AISVGARSSGLRKG
Trigger: CCCCTTCCTCAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp ACTTCTTCAGCGACACCTGGCCACCACTGCCCCCGCTaGCACCTCCACTGCGGACCTTTTTCCTGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: TSSATPGHHCPR*HLHCGPFSWSW
Trigger: CCAAGACCAGGAAAAAGGTCCGCAGTGGAGGTGGCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp GTGCTGCTGACACCCTCGCGGATCAGCACCGCCACCTaGGACTGCAGCTTCACCTTCCGGGAAGAACAGGAG +
Preference number: 6 (lower is better)
Translates to: VLLTPSRISTAT*DCSFTFREEQE
Trigger: CTCCTGTTCTTCCCGGAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 72 bp CCTTCGCTCGGCTCGCCAGGTTGGCTTCTTCCATCTTaGAGAGAAGTGCAGTCAAGGCCAGGACGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: PSLGSPGWLLPS*REVQSRPGRRW
Trigger: CCAGCGGCGTCCTGGCCTTGACTGCACTTCTCTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGCGAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp GATACTTATCTGTGTCCCCACGGCCCTCAGAGCTGCTaGTGCCCTCTCTCTTGTCAGACGTGGCAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: DTYLCPHGPQSC*CPLSCQTWQPA
Trigger: GGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CCA 72 bp CCAGGACACTCACCAGCCCTGCGAGGAAGCTGTCCGTaGCCATGTCCAACACTCACAGTAGCCGTGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PGHSPALRGSCP*PCPTLTVAVSV
Trigger: CACTGACACGGCTACTGTGAGTGTTGGACATGGCCACGGACAGCTTCCTCGCAGGGCTGGTGAGTGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595242.3
CDS CAA 72 bp TTGGTCTTTTTGGGCTTGGTGCTGCCCGGAGCTGCTTaGGCCATCTCAGTGGGGGCCCGCTCGTCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: LVFLGLVLPGAA*AISVGARSSGL
Trigger: CAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp GCCCCTGCCTTGGCCTTGACCTTGGTCTTTTTGGGCTaGGTGCTGCCCGGAGCTGCTTTGGCCATCTCAGTG +
Preference number: 6 (lower is better)
Translates to: APALALTLVFLG*VLPGAALAISV
Trigger: CACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTCAAGGCCAAGGCAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 90 bp TTGGTGGCCTGGATCAGCTCCTGGGCCTTCGCTCGGCTCGCCAGGTaGGCTTCTTCCATCTTGAAGAGAAGTGCAGTCAAGGCCAGGACG +
Preference number: 6 (lower is better)
Translates to: LVAWISSWAFARLAR*ASSILKRSAVKART
Trigger: CGTCCTGGCCTTGACTGCACTTCTCTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCAGGCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS GCA 72 bp TCAGATACTTATCTGTGTCCCCACGGCCCTCAGAGCTaGTGCTGCCCTCTCTCTTGTCAGACGTGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: SDTYLCPHGPQS*CCPLSCQTWQP
Trigger: TGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS TCA 72 bp GGTGGAGCCATAAATACGTCCAGAGTTTCAAAGAGGTaGGGGGCGAAGAGCTGGCCAGGGCTCTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GGAINTSRVSKR*GAKSWPGLSER
Trigger: CCTCTCTGAGAGCCCTGGCCAGCTCTTCGCCCCTCACCTCTTTGAAACTCTGGACGTATTTATGGCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360565.8
CDS CAA 72 bp TGGATCAGCTCCTGGGCCTTCGCTCGGCTCGCCAGGTaGGCTTCTTCCATCTTGAAGAGAAGTGCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: WISSWAFARLAR*ASSILKRSAVK
Trigger: CTTGACTGCACTTCTCTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360565.8