Pregenerated sensors for SBSPON (Homo sapiens)
Ensembl gene IDs: ENSG00000164764Ensembl transcript IDs: ENST00000297354.7, ENST00000519697.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTTTAGCAAACAGACATGTATTCTGTGTCTCACGGGCCACCTGCTaGATGAGAGGACTCCAGTTGAAAGGTCAAGAACATAAAACCACA | + |
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Preference number: 1 (lower is better) Translates to: TLANRHVFCVSRATC*MRGLQLKGQEHKTT Trigger: TGTGGTTTTATGTTCTTGACCTTTCAACTGGAGTCCTCTCATTCAGCAGGTGGCCCGTGAGACACAGAATACATGTCTGTTTGCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATCACGGGCCACCTGCTaGATGAGAGGACTCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKSRATC*MRGLQL Trigger: CAACTGGAGTCCTCTCATTCAGCAGGTGGCCCGTGA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCCTACAATGAGCATTTaGTCCTTTCACTTCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: EIVAPVMTSMPSITDTPSPTMSI*SFHFLS Trigger: GCTTAAGAAGTGAAAGGATCAAATGCTCATTGTAGG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAACCACAAGAGCTTTTTaGGTGGGTCTTCAACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKTTRAF*VGLQLS Trigger: ACTAAGTTGAAGACCCACTCAAAAAGCTCTTGTGGT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCCATTGACCTACAATaGGCATTTGATCCTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPIDLQ*AFDPFT Trigger: AGTGAAAGGATCAAATGCTCATTGTAGGTCAATGGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGTGTTCCTTGAGAACTaGCCCCTAAATTTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKVFLEN*PLNFLS Trigger: AGAAAGAAAATTTAGGGGCCAGTTCTCAAGGAACAC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACTTGAAGCTGGACTCTaGAAGATTATTTTATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKLEAGL*KIILFS Trigger: GCTGAATAAAATAATCTTTCAGAGTCCAGCTTCAAG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACAAGAGCTTTTTGAGTaGGTCTTCAACTTAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: MTSMPSITDTPSTPNIRKQELFE*VFNLVK Trigger: TTTAACTAAGTTGAAGACCCACTCAAAAAGCTCTTG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR TCA 72 bp | AACAGACATGTATTCTGTGTCTCACGGGCCACCTGCTaGATGAGAGGACTCCAGTTGAAAGGTCAAGAACAT | + |
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Preference number: 3 (lower is better) Translates to: NRHVFCVSRATC*MRGLQLKGQEH Trigger: ATGTTCTTGACCTTTCAACTGGAGTCCTCTCATTCAGCAGGTGGCCCGTGAGACACAGAATACATGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR CCA 72 bp | ACAGTGTTTGGCAAAGTCAGGCTTTTCATGGAGTTCTaGTTGAGGAGTCCAAATTTGGCTCTGTGGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: TVFGKVRLFMEF*LRSPNLALWLT Trigger: AGTCAGCCACAGAGCCAAATTTGGACTCCTCAACCAGAACTCCATGAAAAGCCTGACTTTGCCAAACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGTGGCAATGATGTGTTaGGGGACTTTGGCCAAAATT | + |
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Preference number: 3 (lower is better) Translates to: MTSMPSITDTPSTPNIRKVAMMC*GTLAKI Trigger: AATTTTGGCCAAAGTCCCCAAACACATCATTGCCAC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAATGTGTTTGGGGACTTaGGCCAAAATTGAAGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: MTSMPSITDTPSTPNIRKMCLGT*AKIEGL Trigger: TAAACCTTCAATTTTGGCCAAAGTCCCCAAACACAT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAATGAGAGGACTCCAGTaGAAAGGTCAAGAACATAAA | + |
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Preference number: 3 (lower is better) Translates to: MTSMPSITDTPSTPNIRKMRGLQ*KGQEHK Trigger: TTTATGTTCTTGACCTTTCAACTGGAGTCCTCTCAT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAACCTACAATGAGCATTaGATCCTTTCACTTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: MTSMPSITDTPSTPNIRKTYNEH*ILSLLK Trigger: CTTAAGAAGTGAAAGGATCAAATGCTCATTGTAGGT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATTACATCAACTAAACTaGAAGCTGGACTCTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: MTSMPSITDTPSTPNIRKLHQLN*KLDSER Trigger: TCTTTCAGAGTCCAGCTTCAAGTTTAGTTGATGTAA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCTCCACAGGGTCCTCATaGCCAGGGCTCCGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSSTGSS*PGLRRR Trigger: GCGCCGCCGGAGCCCTGGCCATGAGGACCCTGTGGA...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCGGGGCAAGCGCTCTaGTCCTCGGCTGGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPGQAL*SSAGRG Trigger: GCCGCGGCCAGCCGAGGATCAGAGCGCTTGCCCCGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSPGGGA*SEPRWG Trigger: GCCCCATCTCGGCTCACTGCAAGCTCCGCCTCCCGG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCCTGGCCCTGCGGGGTaGAGTACTCCAGGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSPGPAG*STPGSQ Trigger: CTGGCTGCCTGGAGTACTCCACCCCGCAGGGCCAGG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGTGTGCCCGCAGTCCTaGCCCTGCGGGGTGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSVCPQS*PCGVEY Trigger: GTACTCCACCCCGCAGGGCCAGGACTGCGGGCACAC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCAGCAGCAGTCCCCGGTaGAGCGACAGGCTTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSSSSPR*SDRLGR Trigger: GCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGGCGCCCCGCCGTTCTaGGGCTCCTGCTGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKGAPPF*GSCCTE Trigger: CTCGGTGCAGCAGGAGCCTCAGAACGGCGGGGCGCC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGCTCTGATCCTCGGCTaGCCGCGGCCCGGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKALILG*PRPGSC Trigger: GCAGCTCCCGGGCCGCGGCCAGCCGAGGATCAGAGC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCCGAGATGGGGCCACTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSPRWGH*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCCCCATCTCGG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCGCAGTCCTGGCCCTaGGGGGTGGAGTACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPQSWP*GVEYSR Trigger: CCTGGAGTACTCCACCCCGCAGGGCCAGGACTGCGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAAGGCGGAGCTTGCAGTaGGCCGAGATGGGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKRRSLQ*AEMGPL Trigger: CAGTGGCCCCATCTCGGCTCACTGCAAGCTCCGCCT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCAGGCTTGCACTGGTCTaGACAACCACTCCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSRLALV*TTTPGA Trigger: AGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGTGAAGCGACAGGCTTaGTCGCAGAAACACGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSVKRQA*SQKHVP Trigger: CGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCAC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGAAGCACGGGCGAGCTaGGCACGCCCTGTCGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKEARAS*ARPVVV Trigger: GACTACGACAGGGCGTGCCCAGCTCGCCCGTGCTTC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGGCTCTGTGGCTGACTaGAGAATGACTTGTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSGSVAD*RMTCHP Trigger: GGGATGACAAGTCATTCTGCAGTCAGCCACAGAGCC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCTTTTCCAGAGCACAGTaGGGAGTCAAGGACTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSFSRAQ*GVKDSV Trigger: GACAGAGTCCTTGACTCCTCACTGTGCTCTGGAAAA...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGTGTGTAGACCAGTGTaGAGACGTAGCTTGTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSVCRPV*RRSLSC Trigger: ACACGACAAGCTACGTCTCCACACTGGTCTACACAC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCACAGAGTTCATAGCTaGAGGCTGACAATCCACACA | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSHRVHS*RLTIHT Trigger: TGTGTGGATTGTCAGCCTCCAGCTATGAACTCTGTG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGCTGGACAAGAACACTaGTCTACTCGCCGAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSAGQEH*STRRTF Trigger: AAAAGTTCGGCGAGTAGACCAGTGTTCTTGTCCAGC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATTCATAGCTGGAGGCTaGCAATCCACACACACCGTG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKFIAGG*QSTHTV Trigger: CACGGTGTGTGTGGATTGTCAGCCTCCAGCTATGAA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATGGCTGACTGCAGAATaGCTTGTCATCCCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKWLTAE*LVIPGP Trigger: AGGACCTGGGATGACAAGTCATTCTGCAGTCAGCCA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCCTCTCGGAGATACTaGATCCATCTAGTCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPSRRY*IHLVKG Trigger: GCCCTTGACTAGATGGATGCAGTATCTCCGAGAGGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGTTGTAGGCTTGCACTaGTCTGCACAACCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKVVGLH*SAQPLQ Trigger: CTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAAC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCAAAACTGTGAACAGCTaGACAAGAACACTGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSKTVNS*TRTLVY Trigger: GTAGACCAGTGTTCTTGTCCAGCTGTTCACAGTTTT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCTTTTTCCAAGTTCCTTaGCACCGAGGATTACCAATT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSFFQVP*HRGLPI Trigger: AATTGGTAATCCTCGGTGTCAAGGAACTTGGAAAAA...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCTACATGTTTCAGTTCTaGACTATTTCCCTTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSYMFQF*TISLGL Trigger: AAGCCCAAGGGAAATAGTTCAGAACTGAAACATGTA...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCTCTCTCCTTGTTGAATaGAGAGGTAGTTATAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSSLLVE*RGSYKG Trigger: GCCTTTATAACTACCTCTGCATTCAACAAGGAGAGA...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCGAGGATTACCAATTaGTTGCCAATGGAGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPRITN*LPMESL Trigger: CAGACTCTCCATTGGCAAGCAATTGGTAATCCTCGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGTGTTCCTTGAGAACTaGCCCCTAAATTTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSVFLEN*PLNFLS Trigger: AGAAAGAAAATTTAGGGGCCAGTTCTCAAGGAACAC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCTTGAAGCTGGACTCTaGAAGATTATTTTATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSLEAGL*KIILFS Trigger: GCTGAATAAAATAATCTTTCAGAGTCCAGCTTCAAG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATTCCTTGTGTGTGTGTaGGATCGTAGCACCTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKFLVCV*DRSTCN Trigger: ATTACAGGTGCTACGATCTCACACACACACAAGGAA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCAATTTACTTCACAAATaGAAGGGGCTTAGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSNLLHK*KGLSFS Trigger: GGAAAAGCTAAGCCCCTTTCATTTGTGAAGTAAATT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCAAGAGCTTTTTGAGTaGGTCTTCAACTTAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIVAPVMTSMPSITDTPSQELFE*VFNLVK Trigger: TTTAACTAAGTTGAAGACCCACTCAAAAAGCTCTTG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR TCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACCTACAATGAGCATTTaGTCCTTTCACTTCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKPTMSI*SFHFLS Trigger: GCTTAAGAAGTGAAAGGATCAAATGCTCATTGTAGG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAACTTTTCATGGAGTTCTaGTTGAGGAGTCCAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKLFMEF*LRSPNL Trigger: CAAATTTGGACTCCTCAACCAGAACTCCATGAAAAG...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATGCTGTTGCGGTTTATaGTTAATTGTAACATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKCCCGL*LIVTFS Trigger: CGAGAATGTTACAATTAAGCATAAACCGCAACAGCA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR GCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAAATCTCCATCCTTATTaGTGTTGTGAATCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKNLHPY*CCESVI Trigger: AATGACAGATTCACAACAGCAATAAGGATGGAGATT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CCA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATTATCATTCTCTGACTaGTCCAGAAAATTTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MTSMPSITDTPSTPNIRKLSFSD*SRKFGL Trigger: TAACCCAAATTTTCTGGACCAGTCAGAGAATGATAA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS GCA 90 bp | CAGCGCCATCCACAGGGTCCTCATGGCCAGGGCTCCGGCGGCGCCTaGGACGCGACAGACCCCCGGGGCAAGCGCTCTGATCCTCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QRHPQGPHGQGSGGA*DATDPRGKRSDPRL Trigger: CAGCCGAGGATCAGAGCGCTTGCCCCGGGGGTCTGTCGCGTCGCAGGCGCCGCCGGAGCCCTGGCCATGAGGACCCTGTGGATGGCGCTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS TCA 90 bp | CAGCCAGCTCTCTCTTCCAGGGGTGGGCAGGGCGCCCCGCCGTTCTaGGGCTCCTGCTGCACCGAGCGCCTCCGCACACGGGTTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: QPALSSRGGQGAPPF*GSCCTERLRTRVVG Trigger: GCCTACAACCCGTGTGCGGAGGCGCTCGGTGCAGCAGGAGCCTCAGAACGGCGGGGCGCCCTGCCCACCCCTGGAAGAGAGAGCTGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS GCA 90 bp | CTGCACCGAGCGCCTCCGCACACGGGTTGTAGGCTTGCACTGGTCTaGACAACCACTCCAGGGGCTCCATTCCCCCACGAAGCACGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHRAPPHTGCRLALV*TTTPGAPFPHEARA Trigger: CGCCCGTGCTTCGTGGGGGAATGGAGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAACCCGTGTGCGGAGGCGCTCGGTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 90 bp | GGCGAGCTGGGCACGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTaGAGCGACAGGCTTGGTCGCAGAAACACGTCCCGTAGACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GELGTPCRSRSSSPR*SDRLGRRNTSRRPC Trigger: ACAGGGTCTACGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCTTCGACTACGACAGGGCGTGCCCAGCTCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CCA 90 bp | TCCTGCTGCACCGAGCGCCTCCGCACACGGGTTGTAGGCTTGCACTaGTCTGCACAACCACTCCAGGGGCTCCATTCCCCCACGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SCCTERLRTRVVGLH*SAQPLQGLHSPTKH Trigger: GTGCTTCGTGGGGGAATGGAGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAACCCGTGTGCGGAGGCGCTCGGTGCAGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 90 bp | AGGGGCTCCATTCCCCCACGAAGCACGGGCGAGATGATCACAAGGTaGAGTCCCACAATAGGCCATCTGCAAGCTGAAGAGCCAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSIPPRSTGEMITR*SPTIGHLQAEEPGS Trigger: GCTTCCTGGCTCTTCAGCTTGCAGATGGCCTATTGTGGGACTTCACCTTGTGATCATCTCGCCCGTGCTTCGTGGGGGAATGGAGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGGTGAAGCGACAGGCTaGGTCGCAGAAACACGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSGEATG*VAETRP Trigger: GGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CCA 90 bp | GTCCAGGCCATCTCCAGAACAACGAAGGCTCACAGAGTTCATAGCTaGAGGCTGACAATCCACACACACCGTGTATCCCTCTCGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: VQAISRTTKAHRVHS*RLTIHTHRVSLSEI Trigger: TATCTCCGAGAGGGATACACGGTGTGTGTGGATTGTCAGCCTCCAGCTATGAACTCTGTGAGCCTTCGTTGTTCTGGAGATGGCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 90 bp | CCATCTCCAGAACAACGAAGGCTCACAGAGTTCATAGCTGGAGGCTaGCAATCCACACACACCGTGTATCCCTCTCGGAGATACTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSPEQRRLTEFIAGG*QSTHTVYPSRRYCI Trigger: GATGCAGTATCTCCGAGAGGGATACACGGTGTGTGTGGATTGTCAGCCTCCAGCTATGAACTCTGTGAGCCTTCGTTGTTCTGGAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCACACGGGTTGTAGGCTaGCACTGGTCTGCACAACCA | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSTRVVG*HWSAQP Trigger: TGGTTGTGCAGACCAGTGCAAGCCTACAACCCGTGT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCGTGTGGAGACGTAGCTaGTCGTGTTCTCTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSVWRRS*SCSLLV Trigger: AACAAGGAGAGAACACGACAAGCTACGTCTCCACAC...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CCA 90 bp | AAACTCCATACAGTATCCAGCATCCTCTGTGTGTGTAGACCAGTGTaGAGACGTAGCTTGTCGTGTTCTCTCCTTGTTGAATGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLHTVSSILCVCRPV*RRSLSCSLLVECRG Trigger: ACCTCTGCATTCAACAAGGAGAGAACACGACAAGCTACGTCTCCACACTGGTCTACACACACAGAGGATGCTGGATACTGTATGGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 90 bp | AGATACTGCATCCATCTAGTCAAGGGCCAGTTTTCCAGAGCACAGTaGGGAGTCAAGGACTCTGTCTTAAACTCCATACAGTATCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RYCIHLVKGQFSRAQ*GVKDSVLNSIQYPA Trigger: TGCTGGATACTGTATGGAGTTTAAGACAGAGTCCTTGACTCCTCACTGTGCTCTGGAAAACTGGCCCTTGACTAGATGGATGCAGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCCGTGTTCTCTCCTTGTaGAATGCAGAGGTAGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSRVLSL*NAEVVI Trigger: TATAACTACCTCTGCATTCAACAAGGAGAGAACACG...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCAGGATTACCAATTGCTaGCCAATGGAGAGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSRITNC*PMESLI Trigger: AATCAGACTCTCCATTGGCAAGCAATTGGTAATCCT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATTGAGGAGTCCAAATTaGGCTCTGTGGCTGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MTSMPSITDTPSTPNIRKLRSPN*ALWLTA Trigger: TGCAGTCAGCCACAGAGCCAAATTTGGACTCCTCAA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAACCGAGGATTACCAATaGCTTGCCAATGGAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MTSMPSITDTPSTPNIRKTEDYQ*LANGES Trigger: AGACTCTCCATTGGCAAGCAATTGGTAATCCTCGGT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCATGTGTTTGGGGACTTaGGCCAAAATTGAAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSMCLGT*AKIEGL Trigger: TAAACCTTCAATTTTGGCCAAAGTCCCCAAACACAT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | GAGATCGTAGCACCTGTAATGACGTCTATGCCTTCCATAACCGACACACCATCCATGAGAGGACTCCAGTaGAAAGGTCAAGAACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIVAPVMTSMPSITDTPSMRGLQ*KGQEHK Trigger: TTTATGTTCTTGACCTTTCAACTGGAGTCCTCTCAT...GGATGGTGTGTCGGTTATGGAAGGCATAGACGTCATTACAGGTGCTACGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAATGTCGTGTTCTCTCCTaGTTGAATGCAGAGGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MTSMPSITDTPSTPNIRKCRVLS*LNAEVV Trigger: AACTACCTCTGCATTCAACAAGGAGAGAACACGACA...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAGAGACTAACATTTCCTaGTGTGTGTGTGAGATCGTA | + |
|
Preference number: 5 (lower is better) Translates to: MTSMPSITDTPSTPNIRKETNIS*CVCEIV Trigger: TACGATCTCACACACACACAAGGAAATGTTAGTCTC...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS-3UTR CAA 90 bp | ATGACGTCTATGCCTTCCATAACCGACACACCATCCACCCCAAACATTAGAAAAAATACTGACTTAAAGTaGCTAGCCTTGATGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: MTSMPSITDTPSTPNIRKNTDLK*LALMRL Trigger: GAGTCTCATCAAGGCTAGCAACTTTAAGTCAGTATT...TTTTCTAATGTTTGGGGTGGATGGTGTGTCGGTTATGGAAGGCATAGACGTCAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS GCA 72 bp | CCACAGGGTCCTCATGGCCAGGGCTCCGGCGGCGCCTaGGACGCGACAGACCCCCGGGGCAAGCGCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQGPHGQGSGGA*DATDPRGKRSD Trigger: ATCAGAGCGCTTGCCCCGGGGGTCTGTCGCGTCGCAGGCGCCGCCGGAGCCCTGGCCATGAGGACCCTGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CCA 72 bp | ACCGAGCGCCTCCGCACACGGGTTGTAGGCTTGCACTaGTCTGCACAACCACTCCAGGGGCTCCATTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TERLRTRVVGLH*SAQPLQGLHSP Trigger: GGGGGAATGGAGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAACCCGTGTGCGGAGGCGCTCGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CCA 72 bp | GAACATAGGTGTGCCCGCAGTCCTGGCCCTGCGGGGTaGAGTACTCCAGGCAGCCAGCTCTCTCTTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EHRCARSPGPAG*STPGSQLSLPG Trigger: CCCTGGAAGAGAGAGCTGGCTGCCTGGAGTACTCCACCCCGCAGGGCCAGGACTGCGGGCACACCTATGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CAA 90 bp | CGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTGAAGCGACAGGCTaGGTCGCAGAAACACGTCCCGTAGACCCTGTCCAGCCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVVVEAAVPGEATG*VAETRPVDPVQPPA Trigger: GGCTGGAGGCTGGACAGGGTCTACGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCTTCGACTACGACAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS TCA 72 bp | GGCACGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTaGAGCGACAGGCTTGGTCGCAGAAACACGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GTPCRSRSSSPR*SDRLGRRNTSR Trigger: ACGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCTTCGACTACGACAGGGCGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CAA 72 bp | TGCTGCACCGAGCGCCTCCGCACACGGGTTGTAGGCTaGCACTGGTCTGCACAACCACTCCAGGGGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CCTERLRTRVVG*HWSAQPLQGLH Trigger: ATGGAGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAACCCGTGTGCGGAGGCGCTCGGTGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CAA 72 bp | GTAGTCGAAGCAGCAGTCCCCGGTGAAGCGACAGGCTaGGTCGCAGAAACACGTCCCGTAGACCCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VVEAAVPGEATG*VAETRPVDPVQ Trigger: CTGGACAGGGTCTACGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCTTCGACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297354.7 |
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| CDS CCA 72 bp | TGCAGTCTGATGTTTGAGGGCAGGCAGCGTCCAGCATaGGAGAAAGATGTAGGCTGGGAGACTAAGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSLMFEGRQRPA*EKDVGWETKSA Trigger: GGCTGACTTAGTCTCCCAGCCTACATCTTTCTCCCATGCTGGACGCTGCCTGCCCTCAAACATCAGACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS TCA 72 bp | ATTCCCCCACGAAGCACGGGCGAGATGATCACAAGGTaGAGTCCCACAATAGGCCATCTGCAAGCTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IPPRSTGEMITR*SPTIGHLQAEE Trigger: CTCTTCAGCTTGCAGATGGCCTATTGTGGGACTTCACCTTGTGATCATCTCGCCCGTGCTTCGTGGGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS TCA 72 bp | GAACAACGAAGGCTCACAGAGTTCATAGCTGGAGGCTaGCAATCCACACACACCGTGTATCCCTCTCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EQRRLTEFIAGG*QSTHTVYPSRR Trigger: TCTCCGAGAGGGATACACGGTGTGTGTGGATTGTCAGCCTCCAGCTATGAACTCTGTGAGCCTTCGTTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 72 bp | GACACAGAAATAGAGTGCAGAGTGGGATCAGGGAGCTaGCAGCCTTCAGAGCTGAAAGCCACAAACAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DTEIECRVGSGS*QPSELKATNRV Trigger: GACTCTGTTTGTGGCTTTCAGCTCTGAAGGCTGTCAGCTCCCTGATCCCACTCTGCACTCTATTTCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS TCA 72 bp | AAGTCCAAGAGTCCAAAAGCTGAAGAACTTGCAGTCTaGTGTTTGAGGGCAGGCAGCGTCCAGCATGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KSKSPKAEELAV*CLRAGSVQHGR Trigger: TCTCCCATGCTGGACGCTGCCTGCCCTCAAACATCAGACTGCAAGTTCTTCAGCTTTTGGACTCTTGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS GCA 72 bp | CAATCCACACACACCGTGTATCCCTCTCGGAGATACTaGATCCATCTAGTCAAGGGCCAGTTTTCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSTHTVYPSRRY*IHLVKGQFSRA Trigger: TGCTCTGGAAAACTGGCCCTTGACTAGATGGATGCAGTATCTCCGAGAGGGATACACGGTGTGTGTGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS GCA 72 bp | AGACTAAGTCAGCCTAGTGTTTCCATGTTCTTCCACTaGCGAGACCAGTTCGGTCGTGAAGACCCTAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSQPSVSMFFH*RDQFGREDPNP Trigger: TGGGTTAGGGTCTTCACGACCGAACTGGTCTCGGCAGTGGAAGAACATGGAAACACTAGGCTGACTTAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519697.1 |
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| CDS CCA 72 bp | ACAGTATCCAGCATCCTCTGTGTGTGTAGACCAGTGTaGAGACGTAGCTTGTCGTGTTCTCTCCTTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSSILCVCRPV*RRSLSCSLLVE Trigger: TTCAACAAGGAGAGAACACGACAAGCTACGTCTCCACACTGGTCTACACACACAGAGGATGCTGGATACTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CAA 90 bp | GTATCCAGCATCCTCTGTGTGTGTAGACCAGTGTGGAGACGTAGCTaGTCGTGTTCTCTCCTTGTTGAATGCAGAGGTAGTTATAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSSILCVCRPVWRRS*SCSLLVECRGSYKG Trigger: GCCTTTATAACTACCTCTGCATTCAACAAGGAGAGAACACGACAAGCTACGTCTCCACACTGGTCTACACACACAGAGGATGCTGGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS TCA 72 bp | ATCCATCTAGTCAAGGGCCAGTTTTCCAGAGCACAGTaGGGAGTCAAGGACTCTGTCTTAAACTCCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IHLVKGQFSRAQ*GVKDSVLNSIQ Trigger: CTGTATGGAGTTTAAGACAGAGTCCTTGACTCCTCACTGTGCTCTGGAAAACTGGCCCTTGACTAGATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CAA 72 bp | GACCAGTGTGGAGACGTAGCTTGTCGTGTTCTCTCCTaGTTGAATGCAGAGGTAGTTATAAAGGCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: DQCGDVACRVLS*LNAEVVIKAGT Trigger: TGTTCCTGCCTTTATAACTACCTCTGCATTCAACAAGGAGAGAACACGACAAGCTACGTCTCCACACTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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| CDS CAA 72 bp | TTTCCAAGTTCCTTGACACCGAGGATTACCAATTGCTaGCCAATGGAGAGTCTGATTTCCATCGGAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPSSLTPRITNC*PMESLISIGVQ Trigger: CTGGACTCCGATGGAAATCAGACTCTCCATTGGCAAGCAATTGGTAATCCTCGGTGTCAAGGAACTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297354.7 ENST00000519697.1 |
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