RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SBNO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139697

Ensembl transcript IDs: ENST00000267176.8, ENST00000420886.6, ENST00000602398.3

Found 1128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGGACGGTGCCCTGCCACGTTGCGGCAGCCCAGATGGCCGCACTaGCAACCACAGCACGGCTTCCCCATGGGCGCCAGAGGGAGACTG +
Preference number: 1 (lower is better)
Translates to: AGRCPATLRQPRWPH*QPQHGFPMGARGRL
Trigger: CAGTCTCCCTCTGGCGCCCATGGGGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp GGCAGTCTTGCTGGACGGTGCCCTGCCACGTTGCGGCAGCCCAGATaGCCGCACTGCCAACCACAGCACGGCTTCCCCATGGGCGCCAGA +
Preference number: 1 (lower is better)
Translates to: GSLAGRCPATLRQPR*PHCQPQHGFPMGAR
Trigger: TCTGGCGCCCATGGGGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 90 bp ACTGCCAACCACAGCACGGCTTCCCCATGGGCGCCAGAGGGAGACTaGGCAAGGAGGGTCTGCGTGGAGGATGCACACTGGAGGCAATCT +
Preference number: 1 (lower is better)
Translates to: TANHSTASPWAPEGD*ARRVCVEDAHWRQS
Trigger: AGATTGCCTCCAGTGTGCATCCTCCACGCAGACCCTCCTTGCTCAGTCTCCCTCTGGCGCCCATGGGGAAGCCGTGCTGTGGTTGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp AGGTCGGATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTaGTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: RSDVHLKKGWVQLSG*CTHHDQPGHAAPQL
Trigger: GAGCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATCCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp TTTTCCTTGCTTAGCCCTGCACTAAGGGGCAGTCTTGCTGGACGGTaGCCTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCA +
Preference number: 1 (lower is better)
Translates to: FSLLSPALRGSLAGR*PATLRQPRWPHCQP
Trigger: TGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGTGCAGGGCTAAGCAAGGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TGGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCAGTGCTGCAATaGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: WRAQPFRVPQGPVLQ*ESACLTLQQSQPRR
Trigger: CCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp AAGGGTGGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCAGTGCTaGAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTA +
Preference number: 1 (lower is better)
Translates to: KGGEHSRSGYPRDQC*NGNLLVSPSSRVSL
Trigger: TAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp TACAAGGGTGGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGC +
Preference number: 1 (lower is better)
Translates to: YKGGEHSRSGYPRDQ*CNGNLLVSPSSRVS
Trigger: GCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCCACCCTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp CAGAAACATCTGCCCAGGCACAAATGGGCCACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGAAAAGCCAGACAGGTTCTCACCAGG +
Preference number: 1 (lower is better)
Translates to: QKHLPRHKWATRAGY*LGARSGKARQVLTR
Trigger: CCTGGTGAGAACCTGTCTGGCTTTTCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAGATGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp AGGCCTTCAGTGTCTGCTGGCCAGAAACATCTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTACTGGTTAGGGGCCCGCAGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: RPSVSAGQKHLPRHK*ATRAGYWLGARSGK
Trigger: TTTTCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp GCAGGAGGGTTTGTAATGCTTCCCCACTTCCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGA +
Preference number: 1 (lower is better)
Translates to: AGGFVMLPHFLRSSD*TSTTGVGDTSIADG
Trigger: TCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAGGAAGTGGGGAAGCATTACAAACCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp CCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGATGCAGCAATaGAGTATCATTGGAACAGGGCGCACCCTTCACACACTGATGGAC +
Preference number: 1 (lower is better)
Translates to: PDAWYRAPTKGWMQQ*SIIGTGRTLHTLMD
Trigger: GTCCATCAGTGTGTGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp AGGCTTACGGCTGATGTAGACAAGATCCACTCACCGATACAAGGGTaGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCAGTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: RLTADVDKIHSPIQG*RAQPFRVPQGPVLQ
Trigger: TTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCCACCCTTGTATCGGTGAGTGGATCTTGTCTACATCAGCCGTAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp AATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGATaGAGCAATGCAGTATCATTGGAACAGGGCGCACCCTTCACACAC +
Preference number: 1 (lower is better)
Translates to: NQFRTLGTVLPRKAG*SNAVSLEQGAPFTH
Trigger: GTGTGTGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 90 bp TCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTaGAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATG +
Preference number: 1 (lower is better)
Translates to: SLIFARPQCKGRMST*RRGGCNSLGAAHTM
Trigger: CATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp CAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCATTCTTACTaGAGGAGGGTTTGTAATGCTTCCCCACTTCCTCAGGTCCAGCGA +
Preference number: 1 (lower is better)
Translates to: QQPAREDPSQLCHSY*RRVCNASPLPQVQR
Trigger: TCGCTGGACCTGAGGAAGTGGGGAAGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp GAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGGGTTTGTAATGCTTCCCCACTTCCT +
Preference number: 1 (lower is better)
Translates to: EELGQQPAREDPSQL*HSYCRRVCNASPLP
Trigger: AGGAAGTGGGGAAGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 90 bp CTTGGCTGCCAGCCGGGTCTAGCGGCCCTAACAAGGGAAACTGGCTaGTACAAAATGGATCACTGCCTGAGATATATGAACTGGACTGAG +
Preference number: 1 (lower is better)
Translates to: LGCQPGLAALTRETG*YKMDHCLRYMNWTE
Trigger: CTCAGTCCAGTTCATATATCTCAGGCAGTGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGGGCCGCTAGACCCGGCTGGCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TGCTCTTGGCTGCCAGCCGGGTCTAGCGGCCCTAACAAGGGAAACTaGCTGATACAAAATGGATCACTGCCTGAGATATATGAACTGGAC +
Preference number: 1 (lower is better)
Translates to: CSWLPAGSSGPNKGN*LIQNGSLPEIYELD
Trigger: GTCCAGTTCATATATCTCAGGCAGTGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGGGCCGCTAGACCCGGCTGGCAGCCAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp AGCCAGACAGGTTCTCACCAGGGGCCTGCAGAGTGGCCTTCACTCTaGAGGACGCCTGAATTACAAGTATCAAAAAGAACCCGCCTTTTT +
Preference number: 1 (lower is better)
Translates to: SQTGSHQGPAEWPSL*RTPELQVSKRTRLF
Trigger: AAAAAGGCGGGTTCTTTTTGATACTTGTAATTCAGGCGTCCTCCAGAGTGAAGGCCACTCTGCAGGCCCCTGGTGAGAACCTGTCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp CTAAGATGCCCTCATACACAGAAAAGAGGAGTTGGGCCAACAGCCTaGGAGAGAAGATCCTTCCCAACTCTGCCATTCTTACTGCAGGAG +
Preference number: 1 (lower is better)
Translates to: LRCPHTQKRGVGPTA*ERRSFPTLPFLLQE
Trigger: CTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGTGTATGAGGGCATCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp GCCTTTCTTCTCTTGCCGGCTAACAATTGTTCTAACAGCATCCCATaGAGGCCAGCAAATGAATGCCCCAGGGACTACAGCCAGAAAATT +
Preference number: 1 (lower is better)
Translates to: AFLLLPANNCSNSIP*RPANECPRDYSQKI
Trigger: AATTTTCTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGAACAATTGTTAGCCGGCAAGAGAAGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp AAGTGGGAGTCAGAAAGAGGGCTCAAGCTTCTTTATCCTCTTCAGTaGCATAAATACTGTCACAGCAAAAAGGCCTTCAGTGTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: KWESERGLKLLYPLQ*HKYCHSKKAFSVCW
Trigger: CCAGCAGACACTGAAGGCCTTTTTGCTGTGACAGTATTTATGGCACTGAAGAGGATAAAGAAGCTTGAGCCCTCTTTCTGACTCCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp TCTCTAAAGTCACCTGTCAATAACACACTAGGCCTGCCTCCTGCCTaGTATAAATATCCTCAACAGGTTATAAACAGCAGCAGGCTACCT +
Preference number: 1 (lower is better)
Translates to: SLKSPVNNTLGLPPA*YKYPQQVINSSRLP
Trigger: AGGTAGCCTGCTGCTGTTTATAACCTGTTGAGGATATTTATAGCAGGCAGGAGGCAGGCCTAGTGTGTTATTGACAGGTGACTTTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp ATATCAAAAATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTaGTCCCACGAAAGGCTGGATGCAGCAATGCAGTATCATTGGAAC +
Preference number: 1 (lower is better)
Translates to: ISKMIGIINSGRLVP*SHERLDAAMQYHWN
Trigger: GTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATTTTTGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp GCTAACAATTGTTCTAACAGCATCCCATGGAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAGAAAATTGTGCCTGTAAAATATCAT +
Preference number: 1 (lower is better)
Translates to: ANNCSNSIPWRPANE*PRDYSQKIVPVKYH
Trigger: ATGATATTTTACAGGCACAATTTTCTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGAACAATTGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp CTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGAGGGAACTTCTaGCCCTACTTCCATGAAGTGAGATGCAACAATCATTTCCAATCT +
Preference number: 1 (lower is better)
Translates to: LPLDCLSRKGSRGNF*PYFHEVRCNNHFQS
Trigger: AGATTGGAAATGATTGTTGCATCTCACTTCATGGAAGTAGGGGCAGAAGTTCCCTCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TTTATCAAGATGGCTAGTCCAGAGCAAACATTACATCATAGGCCATaGGGGTTGTCACTTAGCTGCATGCTAAGAATCCTCATATGCTGC +
Preference number: 1 (lower is better)
Translates to: FIKMASPEQTLHHRP*GLSLSCMLRILICC
Trigger: GCAGCATATGAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGGACTAGCCATCTTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TGTATCTGGATAATCCCAGTAACTACAGACAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGATAAC +
Preference number: 1 (lower is better)
Translates to: CIWIIPVTTDRDLVV*RLLNEGNTNSPRDN
Trigger: GTTATCTCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCTGTCTGTAGTTACTGGGATTATCCAGATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 90 bp CATTGCAGAGGCAAAGTGGACATGGGGTTAATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTAGATCCTGCAATGAATGGACCTATT +
Preference number: 1 (lower is better)
Translates to: HCRGKVDMGLIKQGL*IQVWHLDPAMNGPI
Trigger: AATAGGTCCATTCATTGCAGGATCTAAATGCCACACCTGAATTCAGAGGCCTTGTTTAATTAACCCCATGTCCACTTTGCCTCTGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp ATGGATCACTGCCTGAGATATATGAACTGGACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGTGCCAAAGAACAGAAAGTACTTTCA +
Preference number: 1 (lower is better)
Translates to: MDHCLRYMNWTEDRS*IRWAKCAKEQKVLS
Trigger: TGAAAGTACTTTCTGTTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGTCCAGTTCATATATCTCAGGCAGTGATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp CCAGAGCAAACATTACATCATAGGCCATGGGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATATGCTGCTTTGAAAACGCCATAAAA +
Preference number: 1 (lower is better)
Translates to: PEQTLHHRPWGLSLS*MLRILICCFENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 90 bp AGGGAATTTGCTGCAGCAGCAGGCCAGAAACCACTGTTTCAAATCTaGAAGATTTTCCTATCAGGTGGGAAGACAGAGATAAGAAATATG +
Preference number: 1 (lower is better)
Translates to: REFAAAAGQKPLFQI*KIFLSGGKTEIRNM
Trigger: CATATTTCTTATCTCTGTCTTCCCACCTGATAGGAAAATCTTGCAGATTTGAAACAGTGGTTTCTGGCCTGCTGCTGCAGCAAATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TACACCTACATAGAAAAGTATCCTTTGCTCAGAGGAGGTAGAACCTaGCCAAAGTTTTATTGCAGAGATACAGTGTACCTCTTCCCACCT +
Preference number: 1 (lower is better)
Translates to: YTYIEKYPLLRGGRT*PKFYCRDTVYLFPP
Trigger: AGGTGGGAAGAGGTACACTGTATCTCTGCAATAAAACTTTGGCCAGGTTCTACCTCCTCTGAGCAAAGGATACTTTTCTATGTAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 90 bp TCCTTGAAAGTTATAAAGGAACATTTTCTTACAGGTGCAAAATTGTaGACAAATACCCAATGTCTGCCTCCCGGGTGCTCAACACCATCA +
Preference number: 1 (lower is better)
Translates to: SLKVIKEHFLTGAKL*TNTQCLPPGCSTPS
Trigger: TGATGGTGTTGAGCACCCGGGAGGCAGACATTGGGTATTTGTTCACAATTTTGCACCTGTAAGAAAATGTTCCTTTATAACTTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TGCCTGAGATATATGAACTGGACTGAGGATAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAACAGAAAGTACTTTCAATTTATTCT +
Preference number: 1 (lower is better)
Translates to: CLRYMNWTEDRSCIR*AKCAKEQKVLSIYS
Trigger: AGAATAAATTGAAAGTACTTTCTGTTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGTCCAGTTCATATATCTCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 90 bp TGTTCTACAAAGAACCTAAGATACATACACTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACATTACATCATAGGCCATGGGGGTTGT +
Preference number: 1 (lower is better)
Translates to: CSTKNLRYIHSYLSR*LVQSKHYIIGHGGC
Trigger: ACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGAGTGTATGTATCTTAGGTTCTTTGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 90 bp AGCCCTGCACTAAGGGGCAGTCTTGCTGGACGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTC +
Preference number: 2 (lower is better)
Translates to: SPALRGSLAGRCPAT*RQPRWPHCQPQHGF
Trigger: GAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGTGCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTGCCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGCAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATGGAGGCCAGCAAATaGATGCCCCAGGGACTACAG +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASMEASK*MPQGLQ
Trigger: CTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTGCAACTCTCTGGGTaGTGCACACACCATGACCAG +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVQLSG*CTHHDQ
Trigger: CTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGGTCTGCGTGGAGGATaGACACTGGAGGCAATCTGT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASGLRGG*TLEAIC
Trigger: ACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTACAGATGGGGTTTTaGCATGTGGACCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVQMGF*HVDQAG
Trigger: ACCAGCCTGGTCCACATGGCAAAACCCCATCTGTAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGCTGCAATGGGAATCTaGTTGTCTCACCCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASAAMGI*LSHPPA
Trigger: TGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASYPRDQ*CNGNLL
Trigger: AAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGCTGTAGCCCTGACATaGAACGCTTGCTACGTTTCT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASAVALT*NACYVS
Trigger: AGAAACGTAGCAAGCGTTTCATGTCAGGGCTACAGC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASTHIPL*SPEVKA
Trigger: TGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCCTCCACCACTGGAGTaGGGGACACTTCCATTGCTG +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSPPPLE*GTLPLL
Trigger: CAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCTGCCCCTACTTCCATaGAGTGAGATGCAACAATCA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLPLLP*SEMQQS
Trigger: TGATTGTTGCATCTCACTTCATGGAAGTAGGGGCAG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATGGCATGGATGTACTaGGTTAACCCTGAGCACTGT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASMAWMY*VNPEHC
Trigger: ACAGTGCTCAGGGTTAACGCAGTACATCCATGCCAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTACCTCCCACAGCAATaGCATGGATGTACTGCGTTA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASYLPQQ*HGCTAL
Trigger: TAACGCAGTACATCCATGCCATTGCTGTGGGAGGTA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTATCTCATGCTAAAATaGAAGTGGAGGGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASYLMLK*KWRGEG
Trigger: TCCCTCTCCCCTCCACTTTCATTTTAGCATGAGATA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCTCTGCCATTCTTACTaGAGGAGGGTTTGTAATGCT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLCHSY*RRVCNA
Trigger: AGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACAGAAAAGAGGAGTTaGGCCAACAGCCTGCGAGAG +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTEKRS*ANSLRE
Trigger: CTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASHHQHC*FSVLLS
Trigger: AGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCCTACTTCCATGAAGTaGGATGCAACAATCATTTCC +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASPTSMK*DATIIS
Trigger: GGAAATGATTGTTGCATCTCACTTCATGGAAGTAGG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCAAACTTGTACATGAATaGAAAGGCCCCAAAGACGCT +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASKLVHE*KGPKDA
Trigger: AGCGTCTTTGGGGCCTTTTCATTCATGTACAAGTTT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSDPSQL*HSYCRR
Trigger: CCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCG +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRLLRF*SKVGRA
Trigger: CGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGGAGAGTGCTGCTCTTaGCTGCCAGCCGGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCGECCS*LPAGSS
Trigger: GCTAGACCCGGCTGGCAGCCAAGAGCAGCACTCTCC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCGATTGTTTGCAAGATaGAAGCCAATTTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASRLFAR*KPICTS
Trigger: GGAAGTACAAATTGGCTTTCATCTTGCAAACAATCG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAACACACACATGAGCTaGGAAGTTCTGCTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSNTHMS*EVLLKV
Trigger: CACCTTCAGCAGAACTTCTCAGCTCATGTGTGTGTT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTG +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQLRSSD*TSTTGV
Trigger: CACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAG +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRPANE*PRDYSQ
Trigger: CTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLSEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGT +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTEDRS*IRWAKC
Trigger: ACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCTCTGCCATTCTTACTaGAGGAGGGTTTGTAATGCT +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSLCHSY*RRVCNA
Trigger: AGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCG +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRLLRF*SKVGRA
Trigger: CGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGAGAGTGCTGCTCTTaGCTGCCAGCCGGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGECCS*LPAGSS
Trigger: GCTAGACCCGGCTGGCAGCCAAGAGCAGCACTCTCC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGATTTTCCTATCAGGTaGGAAGACAGAGATAAGAAA +
Preference number: 2 (lower is better)
Translates to: LPRCGSPDGRTANHSTASDFPIR*EDRDKK
Trigger: TTTCTTATCTCTGTCTTCCCACCTGATAGGAAAATC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTGCGGCAGCCCAGATaGCCGCACTGCCAACCACAG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALRQPR*PHCQPQ
Trigger: CTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCA +
Preference number: 2 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTHIPL*SPEVKA
Trigger: TGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCC +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSAALG*QPGLAA
Trigger: GGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALRSSD*TSTTGV
Trigger: CACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTTGGGCCAACAGCCTaGGAGAGAAGATCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVGPTA*ERRSFP
Trigger: TGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGGAGAGTGCTGCTCTTaGCTGCCAGCCGGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRGECCS*LPAGSS
Trigger: GCTAGACCCGGCTGGCAGCCAAGAGCAGCACTCTCC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCAAGGAGGGTCTGCGTaGAGGATGCACACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAQGGSA*RMHTGG
Trigger: GCCTCCAGTGTGCATCCTCCACGCAGACCCTCCTTG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAACACACACATGAGCTaGGAAGTTCTGCTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHNTHMS*EVLLKV
Trigger: CACCTTCAGCAGAACTTCTCAGCTCATGTGTGTGTT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTGCTGCACACACCATaGCCAGCCTGGGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVLHTP*PAWACS
Trigger: GCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSAALG*QPGLAA
Trigger: GGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTG +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLRSSD*TSTTGV
Trigger: CACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCCTCCACCACTGGAGTaGGGGACACTTCCATTGCTG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAPPPLE*GTLPLL
Trigger: CAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTGCACCTCCACCACTaGAGTGGGGGACACTTCCAT +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALHLHH*SGGHFH
Trigger: ATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCACCTGAAGAAGGGGTaGGTGCAACTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAHLKKG*VQLSGC
Trigger: GCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCACACACAAATTCTGCTaGGTCCCCGTCACAGACTAC +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCTHKFC*VPVTDY
Trigger: GTAGTCTGTGACGGGGACTCAGCAGAATTTGTGTGT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTGCTGCACACACCATaGCCAGCCTGGGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVLHTP*PAWACS
Trigger: GCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTGCCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGCAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGTCTGCGTGGAGGATaGACACTGGAGGCAATCTGT +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGLRGG*TLEAIC
Trigger: ACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACACCTGAAGAAGGGGTaGGTGCAACTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRHLKKG*VQLSGC
Trigger: GCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCACCGATACAAGGGTaGAGAGCACAGCCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASPIQG*RAQPFR
Trigger: CCTGAACGGCTGTGCTCTCCACCCTTGTATCGGTGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCATGTATTCATTACCTTaGCCAGAAACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCMYSLP*PETQGR
Trigger: CCTGCCCTGGGTTTCTGGTCAAGGTAATGAATACAT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAACACACACATGAGCTaGGAAGTTCTGCTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCNTHMS*EVLLKV
Trigger: CACCTTCAGCAGAACTTCTCAGCTCATGTGTGTGTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACCCAGAGATAACATCTaGGCTGCTTTAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQPRDNI*AALDSG
Trigger: TCCAGAGTCTAAAGCAGCTCAGATGTTATCTCTGGG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCATCTCACCCAATTCTaGAAGAAGTTTACAAACAAT +
Preference number: 2 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSHLTQF*KKFTNN
Trigger: ATTGTTTGTAAACTTCTTGCAGAATTGGGTGAGATG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCCATTCACACTGGTTaGCTTTGTGAGGTCCATTTT +
Preference number: 2 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSIHTG*LCEVHF
Trigger: AAAATGGACCTCACAAAGGCAACCAGTGTGAATGGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTT +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAYPRDQ*CNGNLL
Trigger: AAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAAGGCCTTCAGTGTCTaGTGGCCAGAAACATCTGCC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAKAFSV*WPETSA
Trigger: GGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCTT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTGCACCTCCACCACTaGAGTGGGGGACACTTCCAT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLHLHH*SGGHFH
Trigger: ATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDTRAGY*LGARSG
Trigger: TCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLPRHK*ATRAGY
Trigger: GTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTCTGCCCCATAAAGTaGGAGTCAGAAAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALCPIK*ESERGL
Trigger: GAGCCCTCTTTCTGACTCCCACTTTATGGGGCAGAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGGACACTTCCATTGCTaGTGGAAGCTGCCTACTGCT +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSGHFHC*WKLPTA
Trigger: AGCAGTAGGCAGCTTCCATCAGCAATGGAAGTGTCC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGGACACTTCCATTGCTaGTGGAAGCTGCCTACTGCT +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRGHFHC*WKLPTA
Trigger: AGCAGTAGGCAGCTTCCATCAGCAATGGAAGTGTCC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGGTCGGATGTCCACCTaGAGAAGGGGTGGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLGRMST*RRGGCN
Trigger: GTTGCACCCACCCCTTCTTCAGGTGGACATCCGACC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLIKQGL*IQVWHL
Trigger: TAAATGCCACACCTGAATTCAGAGGCCTTGTTTAAT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATATCTCATGCTAAAATaGAAGTGGAGGGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQYLMLK*KWRGEG
Trigger: TCCCTCTCCCCTCCACTTTCATTTTAGCATGAGATA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCA +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKATHIPL*SPEVKA
Trigger: TGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAG +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRPANE*PRDYSQ
Trigger: CTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCATCTCCACGGTGTCTaGCTTTGCCATTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDHLHGV*LCHWEA
Trigger: GGCCTCCCAATGGCAAAGGCAGACACCGTGGAGATG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRSCIR*AKCAKE
Trigger: TTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCACAGAAAAGAGGAGTTaGGCCAACAGCCTGCGAGAG +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSTEKRS*ANSLRE
Trigger: CTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCACCTGAAGAAGGGGTaGGTGCAACTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDHLKKG*VQLSGC
Trigger: GCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACGCCCGGCTACGAGTTaGGTTTTAACAGAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRRPATS*VLTEED
Trigger: GTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGAGTGGCCTTCACTCTaGAGGACGCCTGAATTACAA +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAEWPSL*RTPELQ
Trigger: TTGTAATTCAGGCGTCCTCCAGAGTGAAGGCCACTC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGCTACCTGGAATGCTaGGACAACACACAAATTCTG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGYLEC*DNTQIL
Trigger: CAGAATTTGTGTGTTGTCTCAGCATTCCAGGTAGCC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATGGAGGCCAGCAAATaGATGCCCCAGGGACTACAG +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDMEASK*MPQGLQ
Trigger: CTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 2 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTACAAAATGGATCACTaGCTGAGATATATGAACTGG +
Preference number: 2 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHYKMDH*LRYMNW
Trigger: CCAGTTCATATATCTCAGGCAGTGATCCATTTTGTA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRDPSQL*HSYCRR
Trigger: CCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATCCATTCACACTGGTTaGCTTTGTGAGGTCCATTTT +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSIHTG*LCEVHF
Trigger: AAAATGGACCTCACAAAGGCAACCAGTGTGAATGGA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTGCAACTCTCTGGGTaGTGCACACACCATGACCAG +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVQLSG*CTHHDQ
Trigger: CTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACTGCACCTCCACCACTaGAGTGGGGGACACTTCCAT +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLHLHH*SGGHFH
Trigger: ATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 2 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACGCCCGGCTACGAGTTaGGTTTTAACAGAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRPATS*VLTEED
Trigger: GTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 2 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSNRRGP*MLKLHR
Trigger: CCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGACCTTCCTCTTGACTaGTTGTCAAGAAAAGGATCC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKADLPLD*LSRKGS
Trigger: GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCAAATACCCAATGTCTaGCTCCCGGGTGCTCAACAC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDQIPNV*LPGAQH
Trigger: GTGTTGAGCACCCGGGAGGCAGACATTGGGTATTTG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARSCIR*AKCAKE
Trigger: TTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCCTAACAAGGGAAACTaGCTGATACAAAATGGATCA +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCPNKGN*LIQNGS
Trigger: TGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACCTAACAAGGGAAACTaGCTGATACAAAATGGATCA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQPNKGN*LIQNGS
Trigger: TGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATGTATTCATTACCTTaGCCAGAAACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELMYSLP*PETQGR
Trigger: CCTGCCCTGGGTTTCTGGTCAAGGTAATGAATACAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTACTCTGGAGGACGCCTaGATTACAAGTATCAAAAAG +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKATLEDA*ITSIKK
Trigger: CTTTTTGATACTTGTAATTCAGGCGTCCTCCAGAGT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCTACAAAATGGATCACTaGCTGAGATATATGAACTGG +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCYKMDH*LRYMNW
Trigger: CCAGTTCATATATCTCAGGCAGTGATCCATTTTGTA...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATACAAAATGGATCACTaGCTGAGATATATGAACTGG +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQYKMDH*LRYMNW
Trigger: CCAGTTCATATATCTCAGGCAGTGATCCATTTTGTA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATA +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGLSLS*MLRILI
Trigger: TATGAGGATTCTTAGCATGCAGCTAAGTGACAACCC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGGCTCCAGAGCAGTTaGTTGGCTCTCTTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLRLQSS*LALFWR
Trigger: CCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRRSCIR*AKCAKE
Trigger: TTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACATCATAGGCCATaGGGGTTGTCACTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLHHRP*GLSLSC
Trigger: GCAGCTAAGTGACAACCCCCATGGCCTATGATGTAA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATTAGAGGGTGGGTTTTaGATTTTATCTCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQLEGGF*ILSQVL
Trigger: GAGTACTTGAGATAAAATCCAAAACCCACCCTCTAA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAACACACAAATTCTGCTaGGTCCCCGTCACAGACTAC +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLTHKFC*VPVTDY
Trigger: GTAGTCTGTGACGGGGACTCAGCAGAATTTGTGTGT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDNRRGP*MLKLHR
Trigger: CCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGCCATTGGGAGGCCTaGACTAATCAAACGTTCATT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELCHWEA*TNQTFI
Trigger: AATGAACGTTTGATTAGTTCAGGCCTCCCAATGGCA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCATCTCACCCAATTCTaGAAGAAGTTTACAAACAAT +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCHLTQF*KKFTNN
Trigger: ATTGTTTGTAAACTTCTTGCAGAATTGGGTGAGATG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACATCTCACCCAATTCTaGAAGAAGTTTACAAACAAT +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQHLTQF*KKFTNN
Trigger: ATTGTTTGTAAACTTCTTGCAGAATTGGGTGAGATG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTTTATCCTCTTCAGTaGCATAAATACTGTCACAGC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALYPLQ*HKYCHS
Trigger: GCTGTGACAGTATTTATGGCACTGAAGAGGATAAAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 2 (lower is better)
Translates to: RKEELGQQPAREDPSQLCILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAAAGTAAAGCCAGTTTaGGAAGTTCCAAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQKVKPV*EVPSIL
Trigger: TAAAATGCTTGGAACTTCCCAAACTGGCTTTACTTT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTACATCATAGGCCATaGGGGTTGTCACTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLHHRP*GLSLSC
Trigger: GCAGCTAAGTGACAACCCCCATGGCCTATGATGTAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGTTTCAAGTTGTCTTTaGATCCCATCAGATGTTGTC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAVSSCL*IPSDVV
Trigger: GACAACATCTGATGGGATCCAAAGACAACTTGAAAC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 90 bp AAGATGGCTAGTCCAGAGCAAACATTACATCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTAAGAATCCTCATATGCTGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: KMASPEQTLHHRPWG*SLSCMLRILICCFE
Trigger: TTCAAAGCAGCATATGAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGGACTAGCCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 90 bp CCAAATGAAAACACACCAAGAGCTGACATCCACCTTTGTTTCAAGTaGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTC +
Preference number: 2 (lower is better)
Translates to: PNENTPRADIHLCFK*SLDPIRCCLQMHHV
Trigger: GACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTTTTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 90 bp TTCAGTTACATATCAAAAATGATTGGGATAATCAATTCCGGACGCTaGGTACCGTGCTCCCACGAAAGGCTGGATGCAGCAATGCAGTAT +
Preference number: 2 (lower is better)
Translates to: FSYISKMIGIINSGR*VPCSHERLDAAMQY
Trigger: ATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATTTTTGATATGTAACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELHHQHC*FSVLLS
Trigger: AGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATGGCATGGATGTACTaGGTTAACCCTGAGCACTGT +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLMAWMY*VNPEHC
Trigger: ACAGTGCTCAGGGTTAACGCAGTACATCCATGCCAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCCTGAATGCATGATATaGAACCTTTCATTTCATGCT +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAPECMI*NLSFHA
Trigger: AGCATGAAATGAAAGGTTGCATATCATGCATTCAGG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGT +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDTEDRS*IRWAKC
Trigger: ACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATACCTCCCACAGCAATaGCATGGATGTACTGCGTTA +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLYLPQQ*HGCTAL
Trigger: TAACGCAGTACATCCATGCCATTGCTGTGGGAGGTA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACCTAACAAGGGAAACTaGCTGATACAAAATGGATCA +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRPNKGN*LIQNGS
Trigger: TGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGG +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLRDLVV*RLLNEG
Trigger: CCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTAGAGGGTGGGTTTTaGATTTTATCTCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALEGGF*ILSQVL
Trigger: GAGTACTTGAGATAAAATCCAAAACCCACCCTCTAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 90 bp GAAAACACACCAAGAGCTGACATCCACCTTTGTTTCAAGTTGTCTTaGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTA +
Preference number: 2 (lower is better)
Translates to: ENTPRADIHLCFKLS*DPIRCCLQMHHVRL
Trigger: TAATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCCAAACTAACTCGCTaGTTTTTGCAAGACCACAGT +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLAKLTR*FLQDHS
Trigger: ACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTGGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELIKQGL*IQVWHL
Trigger: TAAATGCCACACCTGAATTCAGAGGCCTTGTTTAAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCCTACTTCCATGAAGTaGGATGCAACAATCATTTCC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDPTSMK*DATIIS
Trigger: GGAAATGATTGTTGCATCTCACTTCATGGAAGTAGG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACCTGAATGCATGATATaGAACCTTTCATTTCATGCT +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRPECMI*NLSFHA
Trigger: AGCATGAAATGAAAGGTTGCATATCATGCATTCAGG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAATCTTGTTTCAGCATaGTTCCAAAGACATGCACTG +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELNLVSA*FQRHAL
Trigger: CAGTGCATGTCTTTGGAAGCATGCTGAAACAAGATT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTGGCATTTAGATCCTaGAATGAATGGACCTATTTT +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVAFRS*NEWTYF
Trigger: AAAATAGGTCCATTCATTGCAGGATCTAAATGCCAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGAGGAGGTAGAACCTaGCCAAAGTTTTATTGCAGA +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRGGRT*PKFYCR
Trigger: TCTGCAATAAAACTTTGGCCAGGTTCTACCTCCTCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAATCTTGTTTCAGCATaGTTCCAAAGACATGCACTG +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDNLVSA*FQRHAL
Trigger: CAGTGCATGTCTTTGGAAGCATGCTGAAACAAGATT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATA +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLGLSLS*MLRILI
Trigger: TATGAGGATTCTTAGCATGCAGCTAAGTGACAACCC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTGGCATTTAGATCCTaGAATGAATGGACCTATTTT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVAFRS*NEWTYF
Trigger: AAAATAGGTCCATTCATTGCAGGATCTAAATGCCAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTCCATGAAGTGAGATaGAACAATCATTTCCAATCT +
Preference number: 2 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSFHEVR*NNHFQS
Trigger: AGATTGGAAATGATTGTTGCATCTCACTTCATGGAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTGGCCAAAGTTTTATTaGAGAGATACAGTGTACCTC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDWPKFY*RDTVYL
Trigger: GAGGTACACTGTATCTCTGCAATAAAACTTTGGCCA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 2 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 2 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACACACTACATTGCTTTaGATGCAGGTTCTTACTAAT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELHTTLL*MQVLTN
Trigger: ATTAGTAAGAACCTGCATCCAAAGCAATGTAGTGTG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTGAAAACACGAACATaGTTTCCAACCAAATCTTTG +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLKTRT*FPTKSL
Trigger: CAAAGATTTGGTTGGAAATCATGTTCGTGTTTTCAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATACACACACTACATTaGTTTGGATGCAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDIHTLH*FGCRFL
Trigger: TAAGAACCTGCATCCAAAGCAATGTAGTGTGTGTAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTCCATGAAGTGAGATaGAACAATCATTTCCAATCT +
Preference number: 2 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELFHEVR*NNHFQS
Trigger: AGATTGGAAATGATTGTTGCATCTCACTTCATGGAA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 2 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAAAGTAAAGCCAGTTTaGGAAGTTCCAAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTKVKPV*EVPSIL
Trigger: TAAAATGCTTGGAACTTCCCAAACTGGCTTTACTTT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACTGAAAACACGAACATaGTTTCCAACCAAATCTTTG +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLKTRT*FPTKSL
Trigger: CAAAGATTTGGTTGGAAATCATGTTCGTGTTTTCAG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATCACTTAAAAGACACTaGATTTGTATCAGACAACTG +
Preference number: 2 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSLKRH*ICIRQL
Trigger: CAGTTGTCTGATACAAATGCAGTGTCTTTTAAGTGA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp TGCCCTGCCACGTTGCGGCAGCCCAGATGGCCGCACTaGCAACCACAGCACGGCTTCCCCATGGGCGCCAGA +
Preference number: 3 (lower is better)
Translates to: CPATLRQPRWPH*QPQHGFPMGAR
Trigger: TCTGGCGCCCATGGGGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp GCTGGACGGTGCCCTGCCACGTTGCGGCAGCCCAGATaGCCGCACTGCCAACCACAGCACGGCTTCCCCATG +
Preference number: 3 (lower is better)
Translates to: AGRCPATLRQPR*PHCQPQHGFPM
Trigger: CATGGGGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp CCCTGCACTAAGGGGCAGTCTTGCTGGACGGTGCCCTaGCACGTTGCGGCAGCCCAGATGGCCGCACTGCCA +
Preference number: 3 (lower is better)
Translates to: PCTKGQSCWTVP*HVAAAQMAALP
Trigger: TGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp CTTAGCCCTGCACTAAGGGGCAGTCTTGCTGGACGGTaGCCTGCCACGTTGCGGCAGCCCAGATGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: LSPALRGSLAGR*PATLRQPRWPH
Trigger: GTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGTGCAGGGCTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp CACAGCACGGCTTCCCCATGGGCGCCAGAGGGAGACTaGGCAAGGAGGGTCTGCGTGGAGGATGCACACTGG +
Preference number: 3 (lower is better)
Translates to: HSTASPWAPEGD*ARRVCVEDAHW
Trigger: CCAGTGTGCATCCTCCACGCAGACCCTCCTTGCTCAGTCTCCCTCTGGCGCCCATGGGGAAGCCGTGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp CACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTaGACACACCATGACCAGCCTGGGCATGCAGCACCC +
Preference number: 3 (lower is better)
Translates to: HLKKGWVQLSGC*THHDQPGHAAP
Trigger: GGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp GTGTCTGCTGGCCAGAAACATCTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTACTGGTTAGGGGCCCGC +
Preference number: 3 (lower is better)
Translates to: VSAGQKHLPRHK*ATRAGYWLGAR
Trigger: GCGGGCCCCTAACCAGTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAGCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp GTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTaGTGCACACACCATGACCAGCCTGGGCATGCAGCA +
Preference number: 3 (lower is better)
Translates to: VHLKKGWVQLSG*CTHHDQPGHAA
Trigger: TGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp GGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTTGTCTCACCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GEHSRSGYPRDQ*CNGNLLVSPSS
Trigger: GCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CTGCCCAGGCACAAATGGGCCACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGAAAAGCCAGACAGGTT +
Preference number: 3 (lower is better)
Translates to: LPRHKWATRAGY*LGARSGKARQV
Trigger: AACCTGTCTGGCTTTTCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: LPRCGSPDGRTANHSTASMGTFL*TACQEK
Trigger: CTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCG +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARCPAT*RQPRWP
Trigger: CGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp AGTTCTGCTGAAGGTGGGGAGAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCCCTAACAAGGGAAACT +
Preference number: 3 (lower is better)
Translates to: SSAEGGESAALG*QPGLAALTRET
Trigger: AGTTTCCCTTGTTAGGGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACTCTCCCCACCTTCAGCAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp CGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGATaGAGCAATGCAGTATCATTGGAACAGGGCGCACCC +
Preference number: 3 (lower is better)
Translates to: RTLGTVLPRKAG*SNAVSLEQGAP
Trigger: GGGTGCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CAGCCGTTCAGGGTACCCCAGGGACCAGTGCTGCAATaGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: QPFRVPQGPVLQ*ESACLTLQQSQ
Trigger: CTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTACCCTGAACGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLPLDC*SRKGSR
Trigger: TCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCCACGGTGTCTGCCTTaGCCATTGGGAGGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLPRCLP*PLGGLN
Trigger: GTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCATACACACACTACATaGCTTTGGATGCAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LPRCGSPDGRTANHSTASHTHTT*LWMQVL
Trigger: AAGAACCTGCATCCAAAGCAATGTAGTGTGTGTATG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTGCTTGGCTCTCTTTaGGAGGACAATTGTTCCTTA +
Preference number: 3 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLLGSL*EDNCSL
Trigger: TAAGGAACAATTGTCCTCCAAAAGAGAGCCAAGCAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCACAGAAAAGAGGAGTaGGGCCAACAGCCTGCGAGA +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLHRKEE*GQQPAR
Trigger: TCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGTG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp AGCTGTAGCCCTGACATGAAACGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCGCAGTACGCACAGGTG +
Preference number: 3 (lower is better)
Translates to: SCSPDMKRLLRF*SKVGRAQYAQV
Trigger: CACCTGTGCGTACTGCGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCGTTTCATGTCAGGGCTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp GCTGATGTAGACAAGATCCACTCACCGATACAAGGGTaGAGAGCACAGCCGTTCAGGGTACCCCAGGGACCA +
Preference number: 3 (lower is better)
Translates to: ADVDKIHSPIQG*RAQPFRVPQGP
Trigger: TGGTCCCTGGGGTACCCTGAACGGCTGTGCTCTCCACCCTTGTATCGGTGAGTGGATCTTGTCTACATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp ATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTaGATGCAGCAATGCAGTATCATTGGAACAGGGCGC +
Preference number: 3 (lower is better)
Translates to: IPDAWYRAPTKG*MQQCSIIGTGR
Trigger: GCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTA +
Preference number: 3 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHHRPWG*SLSCML
Trigger: TAGCATGCAGCTAAGTGACAACCCCCATGGCCTATG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTA +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLHRPWG*SLSCML
Trigger: TAGCATGCAGCTAAGTGACAACCCCCATGGCCTATG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCACGCCCGGCTACGAGTaGGGTTTTAACAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLTPGYE*GFNRRG
Trigger: TCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCGT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATTAGAGGGTGGGTTTaGGATTTTATCTCAAGTACT +
Preference number: 3 (lower is better)
Translates to: LPRCGSPDGRTANHSTASIRGWV*DFISST
Trigger: AGTACTTGAGATAAAATCCAAAACCCACCCTCTAAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp TTTGTAATGCTTCCCCACTTCCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTGGGGGACACTTCCATT +
Preference number: 3 (lower is better)
Translates to: FVMLPHFLRSSD*TSTTGVGDTSI
Trigger: AATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAGGAAGTGGGGAAGCATTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp CAAAAAGGCCTTCAGTGTCTGCTGGCCAGAAACATCTaGCCAGGCACAAATGGGCCACAAGGGCAGGGTACT +
Preference number: 3 (lower is better)
Translates to: QKGLQCLLARNI*PGTNGPQGQGT
Trigger: AGTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp TGGTACCGTGCTCCCACGAAAGGCTGGATGCAGCAATaGAGTATCATTGGAACAGGGCGCACCCTTCACACA +
Preference number: 3 (lower is better)
Translates to: WYRAPTKGWMQQ*SIIGTGRTLHT
Trigger: TGTGTGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGGGGTCTGCAGGGTTaGAAGCAATACCCAGGTATA +
Preference number: 3 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRGLQG*KQYPGI
Trigger: TATACCTGGGTATTGCTTCAAACCCTGCAGACCCCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp TTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTaGAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: FARPQCKGRMST*RRGGCNSLGAA
Trigger: TGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATCCGACCTTTACACTGTGGTCTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp AAAAGCCAGACAGGTTCTCACCAGGGGCCTGCAGAGTaGCCTTCACTCTGGAGGACGCCTGAATTACAAGTA +
Preference number: 3 (lower is better)
Translates to: KSQTGSHQGPAE*PSLWRTPELQV
Trigger: TACTTGTAATTCAGGCGTCCTCCAGAGTGAAGGCCACTCTGCAGGCCCCTGGTGAGAACCTGTCTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp TCCCACGAAAGGCTGGATGCAGCAATGCAGTATCATTaGAACAGGGCGCACCCTTCACACACTGATGGACAC +
Preference number: 3 (lower is better)
Translates to: SHERLDAAMQYH*NRAHPSHTDGH
Trigger: GTGTCCATCAGTGTGTGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCTGCATCCAGCCTTTCGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTATGTATTCATTACCTaGACCAGAAACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCYVFIT*TRNPGQ
Trigger: CTGCCCTGGGTTTCTGGTCAAGGTAATGAATACATA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGCTAGCGAGCTTGAGTaGCAGGTATTTAGGTGTGTT +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLASELE*QVFRCV
Trigger: AACACACCTAAATACCTGCAACTCAAGCTCGCTAGC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp GGGTCTGCGTGGAGGATGCACACTGGAGGCAATCTGTaGCAGGCCCCAATTCACGACAAATTTAGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: GSAWRMHTGGNL*QAPIHDKFSSQ
Trigger: TTGGGAACTAAATTTGTCGTGAATTGGGGCCTGTCACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp GGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGGGTTTGTAATGCTTCC +
Preference number: 3 (lower is better)
Translates to: GQQPAREDPSQL*HSYCRRVCNAS
Trigger: GGAAGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CTCTTGCCGGCTAACAATTGTTCTAACAGCATCCCATaGAGGCCAGCAAATGAATGCCCCAGGGACTACAGC +
Preference number: 3 (lower is better)
Translates to: LLPANNCSNSIP*RPANECPRDYS
Trigger: GCTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGAACAATTGTTAGCCGGCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACCACGGTGTCTGCCTTaGCCATTGGGAGGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELPRCLP*PLGGLN
Trigger: GTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCATACACACACTACATaGCTTTGGATGCAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LQWESACLTLQQSQPRRLHTHTT*LWMQVL
Trigger: AAGAACCTGCATCCAAAGCAATGTAGTGTGTGTATG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTCCAGAGCAGTTGCTaGGCTCTCTTTTGGAGGACA +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALQSSC*ALFWRT
Trigger: TGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp CCCGGCTACGAGTTGGGTTTTAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGGGCGGCCAAACTAACT +
Preference number: 3 (lower is better)
Translates to: PGYELGFNRRGP*MLKLHRAAKLT
Trigger: AGTTAGTTTGGCCGCCCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp GCAGTATCATTGGAACAGGGCGCACCCTTCACACACTaGTGGACACGCTACAACAGGAGCGATAACAAAAGG +
Preference number: 3 (lower is better)
Translates to: AVSLEQGAPFTH*WTRYNRSDNKR
Trigger: CCTTTTGTTATCGCTCCTGTTGTAGCGTGTCCATCAGTGTGTGAAGGGTGCGCCCTGTTCCAATGATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CACATGCATCCGGGGATACCTCCCACAGCAATGGCATaGATGTACTGCGTTAACCCTGAGCACTGTATAAAC +
Preference number: 3 (lower is better)
Translates to: HMHPGIPPTAMA*MYCVNPEHCIN
Trigger: GTTTATACAGTGCTCAGGGTTAACGCAGTACATCCATGCCATTGCTGTGGGAGGTATCCCCGGATGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CAAAACACATGCATCCGGGGATACCTCCCACAGCAATaGCATGGATGTACTGCGTTAACCCTGAGCACTGTA +
Preference number: 3 (lower is better)
Translates to: QNTCIRGYLPQQ*HGCTALTLSTV
Trigger: TACAGTGCTCAGGGTTAACGCAGTACATCCATGCCATTGCTGTGGGAGGTATCCCCGGATGCATGTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CTGCCAGCCGGGTCTAGCGGCCCTAACAAGGGAAACTaGCTGATACAAAATGGATCACTGCCTGAGATATAT +
Preference number: 3 (lower is better)
Translates to: LPAGSSGPNKGN*LIQNGSLPEIY
Trigger: ATATATCTCAGGCAGTGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGGGCCGCTAGACCCGGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACTCCTGTGTTAATCTaGTTTCAGCATGCTTCCAAA +
Preference number: 3 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTPVLI*FQHASK
Trigger: TTTGGAAGCATGCTGAAACAAGATTAACACAGGAGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACACAGAAAAGAGGAGTaGGGCCAACAGCCTGCGAGA +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELHRKEE*GQQPAR
Trigger: TCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGTG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTTGTGAGGTCCATTTaGAGAGGGCTTTCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAFVRSI*RGLSEA
Trigger: GGCCTCTGAAAGCCCTCTCAAAATGGACCTCACAAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp CAGCCGGGTCTAGCGGCCCTAACAAGGGAAACTGGCTaGTACAAAATGGATCACTGCCTGAGATATATGAAC +
Preference number: 3 (lower is better)
Translates to: QPGLAALTRETG*YKMDHCLRYMN
Trigger: GTTCATATATCTCAGGCAGTGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGGGCCGCTAGACCCGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp CATCTCCACGGTGTCTGCCTTTGCCATTGGGAGGCCTaGACTAATCAAACGTTCATTAATAGGATCCCAGCC +
Preference number: 3 (lower is better)
Translates to: HLHGVCLCHWEA*TNQTFINRIPA
Trigger: GGCTGGGATCCTATTAATGAACGTTTGATTAGTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp AACAGACTGACACACACGCACACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCAGATGGGAATTATCAG +
Preference number: 3 (lower is better)
Translates to: NRLTHTHTHIPL*SPEVKADGNYQ
Trigger: CTGATAATTCCCATCTGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGTGTGCGTGTGTGTCAGTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp TGTTCTAACAGCATCCCATGGAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAGAAAATTGTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: CSNSIPWRPANE*PRDYSQKIVPV
Trigger: TACAGGCACAATTTTCTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp ATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTaGTCCCACGAAAGGCTGGATGCAGCAATGCAGTAT +
Preference number: 3 (lower is better)
Translates to: MIGIINSGRLVP*SHERLDAAMQY
Trigger: ATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATC +
Preference number: 3 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSFQPG*SVLTHI
Trigger: GATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAMGTFL*TACQEK
Trigger: CTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCAT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTCCAGAGCAGTTGCTaGGCTCTCTTTTGGAGGACA +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLQSSC*ALFWRT
Trigger: TGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp ATGCTGAAGCTTCACAGGGCGGCCAAACTAACTCGCTaGTTTTTGCAAGACCACAGTGTAAAGGTCGGATGT +
Preference number: 3 (lower is better)
Translates to: MLKLHRAAKLTR*FLQDHSVKVGC
Trigger: ACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTGGCCGCCCTGTGAAGCTTCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGGGGTCTGCAGGGTTaGAAGCAATACCCAGGTATA +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRGLQG*KQYPGI
Trigger: TATACCTGGGTATTGCTTCAAACCCTGCAGACCCCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTATGTATTCATTACCTaGACCAGAAACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAYVFIT*TRNPGQ
Trigger: CTGCCCTGGGTTTCTGGTCAAGGTAATGAATACATA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGAGGCTCCAGAGCAGTaGCTTGGCTCTCTTTTGGAG +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLEAPEQ*LGSLLE
Trigger: CTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTCAACACCATCATTTaGATGAACCATCCGGGTCTT +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALNTII*MNHPGL
Trigger: AAGACCCGGATGGTTCATCAAAATGATGGTGTTGAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAACGCCCGGCTACGAGTaGGGTTTTAACAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLTPGYE*GFNRRG
Trigger: TCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCGT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGGCTTCTTCTTTTCCTaGCTTAGCCCTGCACTAAGG +
Preference number: 3 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDGFFFS*LSPALR
Trigger: CCTTAGTGCAGGGCTAAGCAAGGAAAAGAAGAAGCC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp GCTGCAGCAGCAGGCCAGAAACCACTGTTTCAAATCTaGAAGATTTTCCTATCAGGTGGGAAGACAGAGATA +
Preference number: 3 (lower is better)
Translates to: AAAAGQKPLFQI*KIFLSGGKTEI
Trigger: TATCTCTGTCTTCCCACCTGATAGGAAAATCTTGCAGATTTGAAACAGTGGTTTCTGGCCTGCTGCTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp ATGGCTAGTCCAGAGCAAACATTACATCATAGGCCATaGGGGTTGTCACTTAGCTGCATGCTAAGAATCCTC +
Preference number: 3 (lower is better)
Translates to: MASPEQTLHHRP*GLSLSCMLRIL
Trigger: GAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGGACTAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTATGTATTCATTACCTaGACCAGAAACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTYVFIT*TRNPGQ
Trigger: CTGCCCTGGGTTTCTGGTCAAGGTAATGAATACATA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTTGTGAGGTCCATTTaGAGAGGGCTTTCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLFVRSI*RGLSEA
Trigger: GGCCTCTGAAAGCCCTCTCAAAATGGACCTCACAAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGTGCTCAGAGCCATATaGCTAAAAAGAAAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAVLRAI*LKRKRH
Trigger: ATGCCTTTTTCTTTTTAGCAATATGGCTCTGAGCAC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp ATAATCCCAGTAACTACAGACAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGGAACACTAATTCCCCC +
Preference number: 3 (lower is better)
Translates to: IIPVTTDRDLVV*RLLNEGNTNSP
Trigger: GGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCTGTCTGTAGTTACTGGGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAACTCCTGTGTTAATCTaGTTTCAGCATGCTTCCAAA +
Preference number: 3 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRTPVLI*FQHASK
Trigger: TTTGGAAGCATGCTGAAACAAGATTAACACAGGAGT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLPLDC*SRKGSR
Trigger: TCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTGCTTGGCTCTCTTTaGGAGGACAATTGTTCCTTA +
Preference number: 3 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLLGSL*EDNCSL
Trigger: TAAGGAACAATTGTCCTCCAAAAGAGAGCCAAGCAA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATC +
Preference number: 3 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSFQPG*SVLTHI
Trigger: GATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGTAGCCTTTCTTCTCTaGCCGGCTAACAATTGTTCT +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLVAFLL*PANNCS
Trigger: AGAACAATTGTTAGCCGGCAAGAGAAGAAAGGCTAC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp GGCAAAGTGGACATGGGGTTAATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTAGATCCTGCAATGAAT +
Preference number: 3 (lower is better)
Translates to: GKVDMGLIKQGL*IQVWHLDPAMN
Trigger: ATTCATTGCAGGATCTAAATGCCACACCTGAATTCAGAGGCCTTGTTTAATTAACCCCATGTCCACTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp ACATTACATCATAGGCCATGGGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATATGCTGCTTTGAAAAC +
Preference number: 3 (lower is better)
Translates to: TLHHRPWGLSLS*MLRILICCFEN
Trigger: GTTTTCAAAGCAGCATATGAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp CCAGTTTGGGAAGTTCCAAGCATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACACTCACAAACAGACTG +
Preference number: 3 (lower is better)
Translates to: PVWEVPSILNQL*SVAFNTLTNRL
Trigger: CAGTCTGTTTGTGAGTGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAATGCTTGGAACTTCCCAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATC +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSFQPG*SVLTHI
Trigger: GATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACATACACACACTACATaGCTTTGGATGCAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLHTHTT*LWMQVL
Trigger: AAGAACCTGCATCCAAAGCAATGTAGTGTGTGTATG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp GTTATAAAGGAACATTTTCTTACAGGTGCAAAATTGTaGACAAATACCCAATGTCTGCCTCCCGGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: VIKEHFLTGAKL*TNTQCLPPGCS
Trigger: TGAGCACCCGGGAGGCAGACATTGGGTATTTGTTCACAATTTTGCACCTGTAAGAAAATGTTCCTTTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp TATATGAACTGGACTGAGGATAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAACAGAAAGTACTTTCA +
Preference number: 3 (lower is better)
Translates to: YMNWTEDRSCIR*AKCAKEQKVLS
Trigger: TGAAAGTACTTTCTGTTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGTCCAGTTCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAACTCCTGTGTTAATCTaGTTTCAGCATGCTTCCAAA +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLTPVLI*FQHASK
Trigger: TTTGGAAGCATGCTGAAACAAGATTAACACAGGAGT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATTAGAGGGTGGGTTTaGGATTTTATCTCAAGTACT +
Preference number: 3 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLIRGWV*DFISST
Trigger: AGTACTTGAGATAAAATCCAAAACCCACCCTCTAAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR TCA 72 bp CTAAAGGAAAGACATATGTACCACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCTATTCCAGGTTTGTCC +
Preference number: 3 (lower is better)
Translates to: LKERHMYHHQHC*FSVLLSIPGLS
Trigger: GGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTGGTACATATGTCTTTCCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR GCA 72 bp AGGTATTTAGGTGTGTTTCTGTCACTTAAAAGACACTaGATTTGTATCAGACAACTGGCATTCAATGAGACA +
Preference number: 3 (lower is better)
Translates to: RYLGVFLSLKRH*ICIRQLAFNET
Trigger: TGTCTCATTGAATGCCAGTTGTCTGATACAAATGCAGTGTCTTTTAAGTGACAGAAACACACCTAAATACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CCA 72 bp AAGAACCTAAGATACATACACTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACATTACATCATAGGCCAT +
Preference number: 3 (lower is better)
Translates to: KNLRYIHSYLSR*LVQSKHYIIGH
Trigger: ATGGCCTATGATGTAATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGAGTGTATGTATCTTAGGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CTAAGGGGCAGTCTTGCTGGACGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCGCACTGCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: LRGSLAGRCPAT*RQPRWPHCQPQ
Trigger: CTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGCGCCAGAGGGAGACTaGGCAAGGAGGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSAPEGD*ARRVCV
Trigger: CACGCAGACCCTCCTTGCTCAGTCTCCCTCTGGCGC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCCTCCACCACTGGAGTaGGGGACACTTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASPPPLE*GTLPLL
Trigger: CAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCTGCACCTCCACCACTaGAGTGGGGGACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLHLHH*SGGHFH
Trigger: ATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGCACCCTTCACACACTaGTGGACACGCTACAACAGG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASAPFTH*WTRYNR
Trigger: CCTGTTGTAGCGTGTCCATCAGTGTGTGAAGGGTGC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTTGGGCCAACAGCCTaGGAGAGAAGATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVGPTA*ERRSFP
Trigger: TGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTTGCCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSLPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGCAA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGCTGTTGCTACTGGCTaGGCAATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASAVATG*AILAGG
Trigger: GCCACCTGCTAATATTGCTCAGCCAGTAGCAACAGC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGGACACTTCCATTGCTaGTGGAAGCTGCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASGHFHC*WKLPTA
Trigger: AGCAGTAGGCAGCTTCCATCAGCAATGGAAGTGTCC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGGTCGGATGTCCACCTaGAGAAGGGGTGGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSGRMST*RRGGCN
Trigger: GTTGCACCCACCCCTTCTTCAGGTGGACATCCGACC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSLRSSD*TSTTGV
Trigger: CACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCAAGGCCTTCAGTGTCTaGTGGCCAGAAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASKAFSV*WPETSA
Trigger: GGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCTT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCGCCCGGCTACGAGTTaGGTTTTAACAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASRPATS*VLTEED
Trigger: GTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTRAGY*LGARSG
Trigger: TCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTCTTTCTTCATCTGCTaGGCCCTTTCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASSFFIC*ALSTAS
Trigger: GGATGCTGTGGAAAGGGCTCAGCAGATGAAGAAAGA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGGACGCTTGGTACCGTaGTCCCACGAAAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSGRLVP*SHERLD
Trigger: ATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGGACCAGAGGCGACTaGAGCGGAGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRTRGD*SGGGGG
Trigger: GCCACCGCCGCCTCCGCTCCAGTCGCCTCTGGTCCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATAGGCCATGTTGCGTaGTTCAGAAGCACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASIGHVA*FRSTSC
Trigger: GCAACTGGTGCTTCTGAACCACGCAACATGGCCTAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTTGCGGCAGCCCAGATaGCCGCACTGCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLRQPR*PHCQPQ
Trigger: CTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGATCTGCAGCTTGCTaGAACCGCTCTCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSRSAAC*NRSLAM
Trigger: CATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATGTATTCATTACCTTaGCCAGAAACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASMYSLP*PETQGR
Trigger: CCTGCCCTGGGTTTCTGGTCAAGGTAATGAATACAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASNRRGP*MLKLHR
Trigger: CCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACTGGAGGCAATCTGTaGCAGGCCCCAATTCACGAC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTGGNL*QAPIHD
Trigger: GTCGTGAATTGGGGCCTGTCACAGATTGCCTCCAGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGCACCCTTCACACACTaGTGGACACGCTACAACAGG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSAPFTH*WTRYNR
Trigger: CCTGTTGTAGCGTGTCCATCAGTGTGTGAAGGGTGC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTGGAGTTGCAAGCCCTaGATCTCCACCATCAATATC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASWSCKP*ISTINI
Trigger: GATATTGATGGTGGAGATGCAGGGCTTGCAACTCCA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCTCAGGTCCAGCGACTaGACCTCCACCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLRSSD*TSTTGV
Trigger: CACTCCAGTGGTGGAGGTGCAGTCGCTGGACCTGAG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGTTGGGCCAACAGCCTaGGAGAGAAGATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSVGPTA*ERRSFP
Trigger: TGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAAC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATGCTGGACGGTGCCCTaGCACGTTGCGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQCWTVP*HVAAAQ
Trigger: CTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGTCTTGCTGGACGGTaGCCTGCCACGTTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLSLAGR*PATLRQ
Trigger: CTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTCTAACAGCATCCCATaGAGGCCAGCAAATGAATGC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASSNSIP*RPANEC
Trigger: GCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTCCAGAGCAGTTGCTTaGCTCTCTTTTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASSRAVA*LSFGGQ
Trigger: TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTCACCGATACAAGGGTaGAGAGCACAGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSPIQG*RAQPFR
Trigger: CCTGAACGGCTGTGCTCTCCACCCTTGTATCGGTGA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGTGGAGGATGCACACTaGAGGCAATCTGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSVEDAH*RQSVTG
Trigger: GCCTGTCACAGATTGCCTCCAGTGTGCATCCTCCAC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAAGGGGCAGTCTTGCTaGACGGTGCCCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCKGQSC*TVPCHV
Trigger: AACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCGAGCTGGCAGCTTCTaGGATGATAGCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASRAGSF*DDSNIL
Trigger: AAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGGTCGGATGTCCACCTaGAGAAGGGGTGGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLGRMST*RRGGCN
Trigger: GTTGCACCCACCCCTTCTTCAGGTGGACATCCGACC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGCGCCAGAGGGAGACTaGGCAAGGAGGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCAPEGD*ARRVCV
Trigger: CACGCAGACCCTCCTTGCTCAGTCTCCCTCTGGCGC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCAGCAGCGGCGTCCTaGTCTGCCTACCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAAAAS*SAYLPA
Trigger: GGCGGGGAGGTAGGCAGAGCAGGACGCCGCTGCTGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTGTTTAACAGGAACTaGTGCTTCGGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLFNRN*CFGLQT
Trigger: GGTTTGGAGACCGAAGCAGCAGTTCCTGTTAAACAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGACCTTCCTCTTGACTaGTTGTCAAGAAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASDLPLD*LSRKGS
Trigger: GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCATCTCCACGGTGTCTaGCTTTGCCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCHLHGV*LCHWEA
Trigger: GGCCTCCCAATGGCAAAGGCAGACACCGTGGAGATG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCRLLRF*SKVGRA
Trigger: CGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACTAAGGGGCAGTCTTaGTGGACGGTGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTKGQS*WTVPCH
Trigger: GTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCACTAAGGGGCAGTCTTaGTGGACGGTGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLTKGQS*WTVPCH
Trigger: GTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCACTGGATAAAGAGCTaGTTTCCACTACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASHWIKS*FPLQHL
Trigger: CAGATGCTGTAGTGGAAACCAGCTCTTTATCCAGTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTACTTGCCGCCAGACTaGCTTTCACCAATAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASYLPPD*LSPISE
Trigger: TTCACTTATTGGTGAAAGCCAGTCTGGCGGCAAGTA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCTGCACCTCCACCACTaGAGTGGGGGACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLHLHH*SGGHFH
Trigger: ATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGGACCAGTGCTGCAATaGGAATCTGCTTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSGPVLQ*ESACLT
Trigger: GGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLPRHK*ATRAGY
Trigger: GTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGCAGATGAATTATACTaGTCTAACCAGTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASADELY*SNQCIR
Trigger: CCTGATGCACTGGTTAGATCAGTATAATTCATCTGC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCAGATCCATCCATGTTaGAACCTGTCTGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASQIHPC*NLSVLH
Trigger: ATGAAGAACAGACAGGTTTCAACATGGATGGATCTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTGCTGCACACACCATaGCCAGCCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVLHTP*PAWACS
Trigger: GCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGTGCTGCACACACCATaGCCAGCCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCVLHTP*PAWACS
Trigger: GCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCAC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATGGAGGCCAGCAAATaGATGCCCCAGGGACTACAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCMEASK*MPQGLQ
Trigger: CTGTAGTCCCTGGGGCATTCATTTGCTGGCCTCCAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTCAGCAGTCATACAATaGCAGTATCAGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASSAVIQ*QYQKWH
Trigger: GTGCCATTTCTGATACTGTCATTGTATGACTGCTGA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGCACCCTTCACACACTaGTGGACACGCTACAACAGG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCAPFTH*WTRYNR
Trigger: CCTGTTGTAGCGTGTCCATCAGTGTGTGAAGGGTGC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGCTTACATCAGTAGCTaGTGTTGCTACTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSAYISS*CCYWLS
Trigger: GCTCAGCCAGTAGCAACAGCAGCTACTGATGTAAGC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTCCTCTCGAGCTAGTTaGACAACCCTTTTAACTTTG +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASSSRAS*TTLLTL
Trigger: CAAAGTTAAAAGGGTTGTGCAACTAGCTCGAGAGGA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTCACAACCCGTCCCTTaGGGCCAGTCATCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCSQPVP*GQSSQQ
Trigger: TTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGTGCAACTCTCTGGGTaGTGCACACACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCVQLSG*CTHHDQ
Trigger: CTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCAC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCATCTCCACGGTGTCTaGCTTTGCCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLHLHGV*LCHWEA
Trigger: GGCCTCCCAATGGCAAAGGCAGACACCGTGGAGATG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCATCTCCACGGTGTCTaGCTTTGCCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHHLHGV*LCHWEA
Trigger: GGCCTCCCAATGGCAAAGGCAGACACCGTGGAGATG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATTGCCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQLPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGCAA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGGTCTGCGTGGAGGATaGACACTGGAGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCGLRGG*TLEAIC
Trigger: ACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTGCTGGACGGTGCCCTaGCACGTTGCGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKACWTVP*HVAAAQ
Trigger: CTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGGCTGGATGCAGCAATaGAGTATCATTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSGWMQQ*SIIGTG
Trigger: CCCTGTTCCAATGATACTGCATTGCTGCATCCAGCC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGTTAGGGGCCCGCAGTaGAAAAGCCAGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCVRGPQ*KSQTGS
Trigger: AGAACCTGTCTGGCTTTTCCACTGCGGGCCCCTAAC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGTGGCACTGACTGCTaGACTGACGGGGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLSGTDC*TDGVGI
Trigger: AATGCCTACCCCGTCAGTTCAGCAGTCAGTGCCACT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTTCCTTATTTGCAATaGCAAGTAAAAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVPYLQ*QVKAIV
Trigger: GACGATGGCTTTTACTTGTCATTGCAAATAAGGAAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCGCCAGAGGGAGACTaGGCAAGGAGGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAPEGD*ARRVCV
Trigger: CACGCAGACCCTCCTTGCTCAGTCTCCCTCTGGCGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGCAAGCAGTAAATCTTaGCCTGGCTCCACCATTTTC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSASSKS*PGSTIF
Trigger: GAAAATGGTGGAGCCAGGGCAAGATTTACTGCTTGC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTCTGCATAGGTTTCTaGATGACCCATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASFCIGF*MTHFFF
Trigger: GAAGAAGAAATGGGTCATGCAGAAACCTATGCAGAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTCAGAAGCACCAGTTaGACTAGCATAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASFRSTS*TSINNS
Trigger: AGAGTTGTTTATGCTAGTGCAACTGGTGCTTCTGAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTACCCTCACCCCATATaGCAAGACGGTTCATATAGG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSYPHPI*QDGSYR
Trigger: CCTATATGAACCGTCTTGGCATATGGGGTGAGGGTA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASAALG*QPGLAA
Trigger: GGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCTGGCCAGAAACATCTaGCCAGGCACAAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLLARNI*PGTNGP
Trigger: TGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAAGGTGCAGAGGTCATaGCATTTCGTACTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSKVQRS*HFVLLV
Trigger: CACCAACAGTACGAAATGCCATGACCTCTGCACCTT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGTAAAAGCCATCGTCTaGTCCTGTCAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCVKAIV*SCQLSP
Trigger: TGGGCTGAGCTGACAGGACCAGACGATGGCTTTTAC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSRDLVV*RLLNEG
Trigger: CCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGTTAGGGGCCCGCAGTaGAAAAGCCAGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHVRGPQ*KSQTGS
Trigger: AGAACCTGTCTGGCTTTTCCACTGCGGGCCCCTAAC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCTRAGY*LGARSG
Trigger: TCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCTCTGCCCCATAAAGTaGGAGTCAGAAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLCPIK*ESERGL
Trigger: GAGCCCTCTTTCTGACTCCCACTTTATGGGGCAGAG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTTTCAAGTTGTCTTTaGATCCCATCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVSSCL*IPSDVV
Trigger: GACAACATCTGATGGGATCCAAAGACAACTTGAAAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCGTTGCTCAAGTTGGTaGTGCTCTGAGGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRCSSW*CSEGDA
Trigger: AGCATCACCCTCAGAGCATCACCAACTTGAGCAACG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGGACACTTCCATTGCTaGTGGAAGCTGCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHGHFHC*WKLPTA
Trigger: AGCAGTAGGCAGCTTCCATCAGCAATGGAAGTGTCC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGCGGCGTCCTGCTCTaGCTACCTCCCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSGVLL*LPPRRH
Trigger: ATGGCGGCGGGGAGGTAGGCAGAGCAGGACGCCGCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGCTTACATCAGTAGCTaGTGTTGCTACTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCAYISS*CCYWLS
Trigger: GCTCAGCCAGTAGCAACAGCAGCTACTGATGTAAGC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCATTTCTAATTTGAGCTaGTTCCCAGTATTTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASISNLS*FPVFGR
Trigger: TCGACCAAATACTGGGAAGCAGCTCAAATTAGAAAT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAAACCTACAATCCGTTaGCCATCTTCCGTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSKPTIR*PSSVLS
Trigger: GCTAAGAACGGAAGATGGGCAACGGATTGTAGGTTT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSAALG*QPGLAA
Trigger: GGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCAAGTTTGATCCCAAATaGACTGAAGAAGTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASKFDPK*TEEVRG
Trigger: TCCTCTAACTTCTTCAGTGCATTTGGGATCAAACTT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLYPRDQ*CNGNLL
Trigger: AAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCAAATACCCAATGTCTaGCTCCCGGGTGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLQIPNV*LPGAQH
Trigger: GTGTTGAGCACCCGGGAGGCAGACATTGGGTATTTG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGTCTTGCTGGACGGTaGCCTGCCACGTTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASLAGR*PATLRQ
Trigger: CTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGAACTGACCCCACATaGACTTCTTCATTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSRTDPT*TSSFVA
Trigger: AGCAACGAATGAAGAAGTCCATGTGGGGTCAGTTCT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACACCTGAAGAAGGGGTaGGTGCAACTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQHLKKG*VQLSGC
Trigger: GCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCGCCCGGCTACGAGTTaGGTTTTAACAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRPATS*VLTEED
Trigger: GTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCACACTACATTGCTTTaGATGCAGGTTCTTACTAAT +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASHTTLL*MQVLTN
Trigger: ATTAGTAAGAACCTGCATCCAAAGCAATGTAGTGTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGCTCCCACGAAAGGCTaGATGCAGCAATGCAGTATC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHAPTKG*MQQCSI
Trigger: GATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTGAACTTGGTCTTTTaGAGGTGCAGAGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLNLVF*RCRGHG
Trigger: GCCATGACCTCTGCACCTTCAAAAGACCAAGTTCAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTACGTGGCCAGAGGTTaGATATCCTGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCYVARG*ISWSQK
Trigger: TTTCTGACTCCAGGATATTCAACCTCTGGCCACGTA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTGGACCGCAAGCTGTTaGGACTGGTCTGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHWTASC*DWSEVD
Trigger: ATCAACTTCAGACCAGTCTCAACAGCTTGCGGTCCA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACACACAAATTCTGCTaGGTCCCCGTCACAGACTAC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTHKFC*VPVTDY
Trigger: GTAGTCTGTGACGGGGACTCAGCAGAATTTGTGTGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGGCTACCTGGAATGCTaGGACAACACACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCGYLEC*DNTQIL
Trigger: CAGAATTTGTGTGTTGTCTCAGCATTCCAGGTAGCC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGCTGTAGCCCTGACATaGAACGCTTGCTACGTTTCT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHAVALT*NACYVS
Trigger: AGAAACGTAGCAAGCGTTTCATGTCAGGGCTACAGC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACTCTGGAGGACGCCTaGATTACAAGTATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTLEDA*ITSIKK
Trigger: CTTTTTGATACTTGTAATTCAGGCGTCCTCCAGAGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAAACACACCAAGAGCTaGCATCCACCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSKHTKS*HPPLFQ
Trigger: TTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTTT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGCGGCGTCCTGCTCTaGCTACCTCCCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSGVLL*LPPRRH
Trigger: ATGGCGGCGGGGAGGTAGGCAGAGCAGGACGCCGCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGGTAGGCATTGGAGTTaGAAGCCCTGCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQGRHWS*KPCIST
Trigger: GGTGGAGATGCAGGGCTTGCAACTCCAATGCCTACC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGTAGTAGATGGAGGCTaGCTCACATTTAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSVVDGG*LTFNSA
Trigger: AGCACTATTAAATGTGAGGCAGCCTCCATCTACTAC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267176.8
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAGCATCAATCAGATCTaGAGCTTGCTGAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCSINQI*SLLKPL
Trigger: GAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTCCGAACTGTTGAATTaGTCTATCAGCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCSELLN*SISAPR
Trigger: CCTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATGGCATGGATGTACTaGGTTAACCCTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCMAWMY*VNPEHC
Trigger: ACAGTGCTCAGGGTTAACGCAGTACATCCATGCCAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLDPSQL*HSYCRR
Trigger: CCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHDPSQL*HSYCRR
Trigger: CCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGTTGGGCCAACAGCCTaGGAGAGAAGATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCVGPTA*ERRSFP
Trigger: TGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAAC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTCCATTCACACTGGTTaGCTTTGTGAGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSIHTG*LCEVHF
Trigger: AAAATGGACCTCACAAAGGCAACCAGTGTGAATGGA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCAACTCTCTGGGTGCTaGACACACCATGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCQLSGC*THHDQP
Trigger: AGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTTG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTGCAACTCTCTGGGTaGTGCACACACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVQLSG*CTHHDQ
Trigger: CTGGTCATGGTGTGTGCAGCACCCAGAGAGTTGCAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCTAGCGAGCTTGAGTTaGAGGTATTTAGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSLASLS*RYLGVF
Trigger: AAACACACCTAAATACCTGCAACTCAAGCTCGCTAG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAAGGTGCAGAGGTCATaGCATTTCGTACTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCKVQRS*HFVLLV
Trigger: CACCAACAGTACGAAATGCCATGACCTCTGCACCTT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAGCTGCTGTTGCTACTaGCTGAGCAATATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCSCCCY*LSNISR
Trigger: CCTGCTAATATTGCTCAGCCAGTAGCAACAGCAGCT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCAGGACATAAGTTTTTaGCTTTATGACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: LPRCGSPDGRTANHSTASQDISF*LYDTHQ
Trigger: TTGATGAGTGTCATAAAGCCAAAAACTTATGTCCTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTGGAGGATGCACACTaGAGGCAATCTGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVEDAH*RQSVTG
Trigger: GCCTGTCACAGATTGCCTCCAGTGTGCATCCTCCAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTGCGGCAGCCCAGATaGCCGCACTGCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLRQPR*PHCQPQ
Trigger: CTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTACAAGGGCAGGGTACTaGTTAGGGGCCCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKATRAGY*LGARSG
Trigger: TCCACTGCGGGCCCCTAACCAGTACCCTGCCCTTGT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGCCTTCAGTGTCTGCTaGCCAGAAACATCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCAFSVC*PETSAQ
Trigger: CTGGGCAGATGTTTCTGGCCAGCAGACACTGAAGGC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACTACAGCATCTGGATaGCGTAGGCCAATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTTASG*RRPIFN
Trigger: ATTAAAAATTGGCCTACGTCATCCAGATGCTGTAGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTACGTGGCCAGAGGTTaGATATCCTGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHYVARG*ISWSQK
Trigger: TTTCTGACTCCAGGATATTCAACCTCTGGCCACGTA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACGTTGCTCAAGTTGGTaGTGCTCTGAGGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRCSSW*CSEGDA
Trigger: AGCATCACCCTCAGAGCATCACCAACTTGAGCAACG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHNRRGP*MLKLHR
Trigger: CCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCTGCCCCTACTTCCATaGAGTGAGATGCAACAATCA +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLLPLLP*SEMQQS
Trigger: TGATTGTTGCATCTCACTTCATGGAAGTAGGGGCAG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCCCACCTCTCATGGATaGTGGAAGATACAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHPTSHG*WKIQVV
Trigger: AACCACTTGTATCTTCCATCATCCATGAGAGGTGGG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCCCACCTCTCATGGATaGTGGAAGATACAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLPTSHG*WKIQVV
Trigger: AACCACTTGTATCTTCCATCATCCATGAGAGGTGGG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGCAGCAGCGGCGTCCTaGTCTGCCTACCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTAAAAS*SAYLPA
Trigger: GGCGGGGAGGTAGGCAGAGCAGGACGCCGCTGCTGC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGTAATTGCCTCAAGCTaGAATGCTGATAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCVIASS*NADNQP
Trigger: TGGCTGGTTATCAGCATTGCAGCTTGAGGCAATTAC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTTCAGAAGCACCAGTTaGACTAGCATAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSFRSTS*TSINNS
Trigger: AGAGTTGTTTATGCTAGTGCAACTGGTGCTTCTGAA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGACTTCTTCATTCGTTaGTCAGCATCAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSDFFIR*SASIRS
Trigger: AGATCTGATTGATGCTGAGCAACGAATGAAGAAGTC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCCGAACTGTTGAATTaGTCTATCAGCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSELLN*SISAPR
Trigger: CCTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCATCTCTAGATTCTGTTaGCCTTCTATCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSISRFC*PSITMC
Trigger: ACACATGGTGATAGAAGGGCAACAGAATCTAGAGAT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATATGGCATGGATGTACTaGGTTAACCCTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHMAWMY*VNPEHC
Trigger: ACAGTGCTCAGGGTTAACGCAGTACATCCATGCCAT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCTEDRS*IRWAKC
Trigger: ACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARLLRF*SKVGRA
Trigger: CGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCGATCTGGGCTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSAIWAH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGCCCAGATCGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGCTGCAATGGGAATCTaGTTGTCTCACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCAAMGI*LSHPPA
Trigger: TGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATGCTGGACGGTGCCCTaGCACGTTGCGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLCWTVP*HVAAAQ
Trigger: CTGGGCTGCCGCAACGTGGCAGGGCACCGTCCAGCA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCCACGAAAGGCTGGATaGAGCAATGCAGTATCATTG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHPRKAG*SNAVSL
Trigger: CAATGATACTGCATTGCTGCATCCAGCCTTTCGTGG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAGGACCAGAGGCGACTaGAGCGGAGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRTRGD*SGGGGG
Trigger: GCCACCGCCGCCTCCGCTCCAGTCGCCTCTGGTCCT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGTAGGTACAGTCTCTaGTTCTTGTTTAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSRYSL*FLFNRN
Trigger: GTTCCTGTTAAACAAGAACCAGAGACTGTACCTACT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSNNSGF*QFVLKL
Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRDLVV*RLLNEG
Trigger: CCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGGACCAGTGCTGCAATaGGAATCTGCTTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQGPVLQ*ESACLT
Trigger: GGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRLPRHK*ATRAGY
Trigger: GTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGTGGCACTGACTGCTaGACTGACGGGGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASGTDC*TDGVGI
Trigger: AATGCCTACCCCGTCAGTTCAGCAGTCAGTGCCACT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTTTGGCAATTTGTTCTaGAGCTCTAAAACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSFGNLF*SSKTAK
Trigger: CTTAGCAGTTTTAGAGCTTCAGAACAAATTGCCAAA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCTATGCATAAGTATTTaGAGAACCTCTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLCISI*RTSGEQ
Trigger: CTGCTCACCAGAGGTTCTTCAAATACTTATGCATAG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAGCAGTAACTTGGTTTaGTCTATGAGTACGTCCGAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCSSNLV*SMSTSE
Trigger: TTCGGACGTACTCATAGATCAAACCAAGTTACTGCT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCATCAGGGCATCATCTaGGACGACCTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCHQGII*DDLLIF
Trigger: AAATATAAGAAGGTCGTCTCAGATGATGCCCTGATG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATCACGTTTGTGCCACTaGCAGATGCTAGAACACCCT +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSRLCH*QMLEHP
Trigger: AGGGTGTTCTAGCATCTGTCAGTGGCACAAACGTGA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCAGATCCATCCATGTTaGAACCTGTCTGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCQIHPC*NLSVLH
Trigger: ATGAAGAACAGACAGGTTTCAACATGGATGGATCTG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCHHQHC*FSVLLS
Trigger: AGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTATCTCATGCTAAAATaGAAGTGGAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLYLMLK*KWRGEG
Trigger: TCCCTCTCCCCTCCACTTTCATTTTAGCATGAGATA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCCTACTTCCATGAAGTaGGATGCAACAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCPTSMK*DATIIS
Trigger: GGAAATGATTGTTGCATCTCACTTCATGGAAGTAGG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCACTCTGGAGGACGCCTaGATTACAAGTATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCTLEDA*ITSIKK
Trigger: CTTTTTGATACTTGTAATTCAGGCGTCCTCCAGAGT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGTAATTGCCTCAAGCTaGAATGCTGATAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHVIASS*NADNQP
Trigger: TGGCTGGTTATCAGCATTGCAGCTTGAGGCAATTAC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCACAACCCGTCCCTTaGGGCCAGTCATCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASQPVP*GQSSQQ
Trigger: TTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCATCACCATGTGTAAGTaGCCCCAAACTCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLITMCK*PQTLKS
Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGAT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCCTGTCTGTTCTTCATaGGTTGCTCAAGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLPVCSS*VAQVGD
Trigger: ATCACCAACTTGAGCAACGCATGAAGAACAGACAGG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCCTGAATGCATGATATaGAACCTTTCATTTCATGCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSPECMI*NLSFHA
Trigger: AGCATGAAATGAAAGGTTGCATATCATGCATTCAGG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGATCCTTCCCAACTCTaGCATTCTTACTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQDPSQL*HSYCRR
Trigger: CCTCCTGCAGTAAGAATGGCAGAGTTGGGAAGGATC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCGLSLS*MLRILI
Trigger: TATGAGGATTCTTAGCATGCAGCTAAGTGACAACCC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGTCTTGCTGGACGGTaGCCTGCCACGTTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSLAGR*PATLRQ
Trigger: CTGCCGCAACGTGGCAGGGCACCGTCCAGCAAGACT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTCTCACCAGGGGCCTaGAGAGTGGCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSFSPGA*RVAFTL
Trigger: CAGAGTGAAGGCCACTCTGCAGGCCCCTGGTGAGAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTGGCCAGAAACATCTaGCCAGGCACAAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALARNI*PGTNGP
Trigger: TGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGGCTGGATGCAGCAATaGAGTATCATTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCGWMQQ*SIIGTG
Trigger: CCCTGTTCCAATGATACTGCATTGCTGCATCCAGCC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCACTGGATAAAGAGCTaGTTTCCACTACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHHWIKS*FPLQHL
Trigger: CAGATGCTGTAGTGGAAACCAGCTCTTTATCCAGTG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGAACTGACCCCACATaGACTTCTTCATTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRTDPT*TSSFVA
Trigger: AGCAACGAATGAAGAAGTCCATGTGGGGTCAGTTCT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCACAAGGACTATCTCTTaGCGAACTGTTGTTACTTGG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCTRTIS*RTVVTW
Trigger: CCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRSCIR*AKCAKE
Trigger: TTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTTTCTGCAGCAAAGTaGGCCGAGCGCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVSAAK*AERSTH
Trigger: GTGCGTACTGCGCTCGGCCCACTTTGCTGCAGAAAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGATTTTCCTATCAGGTaGGAAGACAGAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSDFPIR*EDRDKK
Trigger: TTTCTTATCTCTGTCTTCCCACCTGATAGGAAAATC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAAGGGGCAGTCTTGCTaGACGGTGCCCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELKGQSC*TVPCHV
Trigger: AACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAGAGGAGGTAGAACCTaGCCAAAGTTTTATTGCAGA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCRGGRT*PKFYCR
Trigger: TCTGCAATAAAACTTTGGCCAGGTTCTACCTCCTCT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGTGGCACTGACTGCTaGACTGACGGGGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSGTDC*TDGVGI
Trigger: AATGCCTACCCCGTCAGTTCAGCAGTCAGTGCCACT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGATCTGCAGCTTGCTaGAACCGCTCTCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSRSAAC*NRSLAM
Trigger: CATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTATGCATAAGTATTTaGAGAACCTCTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLCISI*RTSGEQ
Trigger: CTGCTCACCAGAGGTTCTTCAAATACTTATGCATAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCATGTTTTTCAATGAGTaGCTGCAACACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLMFFNE*LQHTFG
Trigger: GCCAAAGGTGTGTTGCAGTCACTCATTGAAAAACAT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCATCTAAAAATGGGTTaGAATCGTCATCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCHLKMG*NRHHLQ
Trigger: CTGGAGATGATGACGATTTCAACCCATTTTTAGATG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCAGATCCATCCATGTTaGAACCTGTCTGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLQIHPC*NLSVLH
Trigger: ATGAAGAACAGACAGGTTTCAACATGGATGGATCTG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAATGTATTCATTACCTTaGCCAGAAACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQMYSLP*PETQGR
Trigger: CCTGCCCTGGGTTTCTGGTCAAGGTAATGAATACAT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCGATTGTTTGCAAGATaGAAGCCAATTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCRLFAR*KPICTS
Trigger: GGAAGTACAAATTGGCTTTCATCTTGCAAACAATCG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGACACTTCCATTGCTaGTGGAAGCTGCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGHFHC*WKLPTA
Trigger: AGCAGTAGGCAGCTTCCATCAGCAATGGAAGTGTCC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCCCAGAGATAACATCTaGGCTGCTTTAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCPRDNI*AALDSG
Trigger: TCCAGAGTCTAAAGCAGCTCAGATGTTATCTCTGGG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTCAGCAGTCATACAATaGCAGTATCAGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLSAVIQ*QYQKWH
Trigger: GTGCCATTTCTGATACTGTCATTGTATGACTGCTGA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCACAGGTGCAAAATTGTaGACAAATACCCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCTGAKL*TNTQCL
Trigger: CAGACATTGGGTATTTGTTCACAATTTTGCACCTGT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGTTACGCTTCACGGTTaGTCGTTTTTACTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLVTLHG*SFLLAR
Trigger: TCTTGCAAGTAAAAACGATCAACCGTGAAGCGTAAC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGGTAGGCATTGGAGTTaGAAGCCCTGCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRGRHWS*KPCIST
Trigger: GGTGGAGATGCAGGGCTTGCAACTCCAATGCCTACC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCATCAGTAGCTGCTGTTaGTACTGGCTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLISSCC*YWLSNI
Trigger: AATATTGCTCAGCCAGTAGCAACAGCAGCTACTGAT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTTCTGCATAGGTTTCTaGATGACCCATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCFCIGF*MTHFFF
Trigger: GAAGAAGAAATGGGTCATGCAGAAACCTATGCAGAA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAGTGCTGCTCTTGGCTaGCAGCCGGGTCTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMSAALG*QPGLAA
Trigger: GGCCGCTAGACCCGGCTGGCAGCCAAGAGCAGCACT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTTCCATGAAGTGAGATaGAACAATCATTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSFHEVR*NNHFQS
Trigger: AGATTGGAAATGATTGTTGCATCTCACTTCATGGAA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTAGCGAGCTTGAGTTaGAGGTATTTAGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLASLS*RYLGVF
Trigger: AAACACACCTAAATACCTGCAACTCAAGCTCGCTAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGCGATCTGGGCTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDAIWAH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGCCCAGATCGC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGGCTCCAGAGCAGTTaGTTGGCTCTCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARLQSS*LALFWR
Trigger: CCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCTGGCCAGAAACATCTaGCCAGGCACAAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLARNI*PGTNGP
Trigger: TGGCCCATTTGTGCCTGGGCAGATGTTTCTGGCCAG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGGACGCTTGGTACCGTaGTCCCACGAAAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTGRLVP*SHERLD
Trigger: ATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGGAACCTTCATGGTTaGGGAAAAACTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRNLHG*GKTPHL
Trigger: AAGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCCTCCACCACTGGAGTaGGGGACACTTCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTPPPLE*GTLPLL
Trigger: CAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTTTCTGCAGCAAAGTaGGCCGAGCGCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVSAAK*AERSTH
Trigger: GTGCGTACTGCGCTCGGCCCACTTTGCTGCAGAAAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCAAGGAGGGTCTGCGTaGAGGATGCACACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDQGGSA*RMHTGG
Trigger: GCCTCCAGTGTGCATCCTCCACGCAGACCCTCCTTG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCCTTCAGTGTCTGCTaGCCAGAAACATCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSAFSVC*PETSAQ
Trigger: CTGGGCAGATGTTTCTGGCCAGCAGACACTGAAGGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGCCTTCAGTGTCTGCTaGCCAGAAACATCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRAFSVC*PETSAQ
Trigger: CTGGGCAGATGTTTCTGGCCAGCAGACACTGAAGGC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCTCCCACGAAAGGCTaGATGCAGCAATGCAGTATC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAPTKG*MQQCSI
Trigger: GATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGAGGGAACTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDC*SRKGSRGNFCP
Trigger: GGGGCAGAAGTTCCCTCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGCTGTTGCTACTGGCTaGGCAATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRAVATG*AILAGG
Trigger: GCCACCTGCTAATATTGCTCAGCCAGTAGCAACAGC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAATAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQIVWRW*YHRRIQ
Trigger: TTGGATTCTCCTATGGTATCACCACCTCCAGACTAT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTGGACCGCAAGCTGTTaGGACTGGTCTGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAWTASC*DWSEVD
Trigger: ATCAACTTCAGACCAGTCTCAACAGCTTGCGGTCCA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTCACAGACTACTTCTaGAGGTCACCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVTDYF*RSPVRA
Trigger: GGCCCTCACTGGTGACCTTCAGAAGTAGTCTGTGAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCACTGGAGGCAATCTGTaGCAGGCCCCAATTCACGAC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTTGGNL*QAPIHD
Trigger: GTCGTGAATTGGGGCCTGTCACAGATTGCCTCCAGT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACTGGAGGCAATCTGTaGCAGGCCCCAATTCACGAC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTGGNL*QAPIHD
Trigger: GTCGTGAATTGGGGCCTGTCACAGATTGCCTCCAGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGTAATTGCCTCAAGCTaGAATGCTGATAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCVIASS*NADNQP
Trigger: TGGCTGGTTATCAGCATTGCAGCTTGAGGCAATTAC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAGGAAAGTTTCATGTTaGTGGGCTGCATATGTAATT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCRKVSC*WAAYVI
Trigger: AATTACATATGCAGCCCAGCAACATGAAACTTTCCT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTTTTCAATGAGTGACTaGAACACACCTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLFSMSD*NTPLAV
Trigger: AACTGCCAAAGGTGTGTTGCAGTCACTCATTGAAAA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCCTGAATGCATGATATaGAACCTTTCATTTCATGCT +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCPECMI*NLSFHA
Trigger: AGCATGAAATGAAAGGTTGCATATCATGCATTCAGG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTACAAAATGGATCACTaGCTGAGATATATGAACTGG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCYKMDH*LRYMNW
Trigger: CCAGTTCATATATCTCAGGCAGTGATCCATTTTGTA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTRPANE*PRDYSQ
Trigger: CTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGACCTTCCTCTTGACTaGTTGTCAAGAAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCDLPLD*LSRKGS
Trigger: GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCGCTTGCTACGTTTCTaGAGCAAAGTGGGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRLLRF*SKVGRA
Trigger: CGCTCGGCCCACTTTGCTGCAGAAACGTAGCAAGCG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCGATCTGGGCTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLAIWAH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGCCCAGATCGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGGCTCCAGAGCAGTTaGTTGGCTCTCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSRLQSS*LALFWR
Trigger: CCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCTGCAATGGGAATCTaGTTGTCTCACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSAAMGI*LSHPPA
Trigger: TGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRYPRDQ*CNGNLL
Trigger: AAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCAAATACCCAATGTCTaGCTCCCGGGTGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSQIPNV*LPGAQH
Trigger: GTGTTGAGCACCCGGGAGGCAGACATTGGGTATTTG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGGTCTGCGTGGAGGATaGACACTGGAGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTGLRGG*TLEAIC
Trigger: ACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGGACGCTTGGTACCGTaGTCCCACGAAAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDGRLVP*SHERLD
Trigger: ATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTAGATGGAGGCTGCTaGCTCACATTTAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVDGGC*LTFNSA
Trigger: AGCACTATTAAATGTGAGGCAGCAGCCTCCATCTAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCAACAGGAACCTTCATaGTTGGGGAAAAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCQQEPS*LGKNSS
Trigger: TGAGGAGTTTTTCCCCAACCATGAAGGTTCCTGTTG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCACCAGCCATTATCAATaGTTTCCTCAGAAATGGATG +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLTSHYQ*FPQKWM
Trigger: CATCCATTTCTGAGGAAACCATTGATAATGGCTGGT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACCAGCCATTATCAATaGTTTCCTCAGAAATGGATG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTSHYQ*FPQKWM
Trigger: CATCCATTTCTGAGGAAACCATTGATAATGGCTGGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAAAGTTTCATGTTGCTaGGCTGCATATGTAATTGCC +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHKVSCC*AAYVIA
Trigger: GGCAATTACATATGCAGCCCAGCAACATGAAACTTT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACTGAATTCTCTAAATaGAGTACCCTCACCCCATAT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTEFSK*STLTPY
Trigger: ATATGGGGTGAGGGTACTCCATTTAGAGAATTCAGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGAAGTTGCATCCGCTaGGCAAAATGTGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCRSCIR*AKCAKE
Trigger: TTCTTTGGCACATTTTGCCCAGCGGATGCAACTTCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGGAGAGTGCTGCTCTTaGCTGCCAGCCGGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTGECCS*LPAGSS
Trigger: GCTAGACCCGGCTGGCAGCCAAGAGCAGCACTCTCC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCGCCCGGCTACGAGTTaGGTTTTAACAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSRPATS*VLTEED
Trigger: GTCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGATTTTCCTATCAGGTaGGAAGACAGAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCDFPIR*EDRDKK
Trigger: TTTCTTATCTCTGTCTTCCCACCTGATAGGAAAATC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGTGTTAGCCAGGAGATaGTCTCAATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAVLARR*SQSPDL
Trigger: GAGGTCAGGAGATTGAGACCATCTCCTGGCTAACAC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGGACCAGTGCTGCAATaGGAATCTGCTTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSGPVLQ*ESACLT
Trigger: GGTGAGACAAGCAGATTCCCATTGCAGCACTGGTCC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCACCGATACAAGGGTaGAGAGCACAGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSPIQG*RAQPFR
Trigger: CCTGAACGGCTGTGCTCTCCACCCTTGTATCGGTGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGTTTCAAGTTGTCTTTaGATCCCATCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLVSSCL*IPSDVV
Trigger: GACAACATCTGATGGGATCCAAAGACAACTTGAAAC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCAATGCAGTATCATTaGAACAGGGCGCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAMQYH*NRAHPS
Trigger: TGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCAATTCCGGACGCTTaGTACCGTGCTCCCACGAAA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSIPDA*YRAPTK
Trigger: TTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CCAATGTCTGCCTCCCGGGTGCTCAACACCATCATTTaGATGAACCATCCGGGTCTTCCCAACTCGAATTAT +
Preference number: 4 (lower is better)
Translates to: PMSASRVLNTII*MNHPGLPNSNY
Trigger: ATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACCCGGGAGGCAGACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGTAGATCTTTAAGCTaGACTTGGTCTTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSRSLS*TWSFEG
Trigger: ACCTTCAAAAGACCAAGTTCAGCTTAAAGATCTACT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGCTGTTGCTACTGGCTaGGCAATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTAVATG*AILAGG
Trigger: GCCACCTGCTAATATTGCTCAGCCAGTAGCAACAGC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCTCCGTTCTACTGCTTaGATAAAATCACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLLRSTA*IKSLNS
Trigger: AGAATTCAGTGATTTTATTCAAGCAGTAGAACGGAG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTCTTTCTTCATCTGCTaGGCCCTTTCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSFFIC*ALSTAS
Trigger: GGATGCTGTGGAAAGGGCTCAGCAGATGAAGAAAGA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGCAGTAACTTGGTTTaGTCTATGAGTACGTCCGAA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCSSNLV*SMSTSE
Trigger: TTCGGACGTACTCATAGATCAAACCAAGTTACTGCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTGGACCGCAAGCTGTTaGGACTGGTCTGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSWTASC*DWSEVD
Trigger: ATCAACTTCAGACCAGTCTCAACAGCTTGCGGTCCA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCCTGAAAACACGAACATaGTTTCCAACCAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLLKTRT*FPTKSL
Trigger: CAAAGATTTGGTTGGAAATCATGTTCGTGTTTTCAG...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAAACTTGTACATGAATaGAAAGGCCCCAAAGACGCT +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCKLVHE*KGPKDA
Trigger: AGCGTCTTTGGGGCCTTTTCATTCATGTACAAGTTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTTTAGTTCCCAAGACTaGTCCAAATACAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LQWESACLTLQQSQPRRLFSSQD*SKYRML
Trigger: AAGCATTCTGTATTTGGATCAGTCTTGGGAACTAAA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTTACGCTTCACGGTTaGTCGTTTTTACTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVTLHG*SFLLAR
Trigger: TCTTGCAAGTAAAAACGATCAACCGTGAAGCGTAAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGCTTACATCAGTAGCTaGTGTTGCTACTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRAYISS*CCYWLS
Trigger: GCTCAGCCAGTAGCAACAGCAGCTACTGATGTAAGC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAACACTAAACCACAATaGTCGTTTTCTACTCAACAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCNTKPQ*SFSTQQ
Trigger: TTGTTGAGTAGAAAACGAGCATTGTGGTTTAGTGTT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTCACAACCCGTCCCTTaGGGCCAGTCATCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSQPVP*GQSSQQ
Trigger: TTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTGCTTCCATCATCATTaGTCACAACCCGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSCFHHH*SQPVPC
Trigger: GCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAAATCTTTGTTCTCCTaGCAGTTCAGATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCKSLFS*QFRYQK
Trigger: TTTCTGATATCTGAACTGGCAGGAGAACAAAGATTT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTTTAGCAACAATAGATaGAAATCTTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCFSNNR*KSLFSC
Trigger: GCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGTACAGATGGGGTTTTaGCATGTGGACCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTVQMGF*HVDQAG
Trigger: ACCAGCCTGGTCCACATGGCAAAACCCCATCTGTAC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGGCCAGCAAATGAATaGCCCAGGGACTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRPANE*PRDYSQ
Trigger: CTGGCTGTAGTCCCTGGGGCATTCATTTGCTGGCCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCAAATACCCAATGTCTaGCTCCCGGGTGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTQIPNV*LPGAQH
Trigger: GTGTTGAGCACCCGGGAGGCAGACATTGGGTATTTG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACTAAGGGGCAGTCTTaGTGGACGGTGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTKGQS*WTVPCH
Trigger: GTGGCAGGGCACCGTCCAGCAAGACTGCCCCTTAGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGGCTGGATGCAGCAATaGAGTATCATTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSGWMQQ*SIIGTG
Trigger: CCCTGTTCCAATGATACTGCATTGCTGCATCCAGCC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGTGCTTGCAGTAGTCTaGATAAACTTAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHVLAVV*INLVKV
Trigger: CACTTTAACTAAGTTTATCCAGACTACTGCAAGCAC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAAGGTGCAGAGGTCATaGCATTTCGTACTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAKVQRS*HFVLLV
Trigger: CACCAACAGTACGAAATGCCATGACCTCTGCACCTT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGGAACCTTCATGGTTaGGGAAAAACTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCRNLHG*GKTPHL
Trigger: AAGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACGAACTGTTGTTACTTaGAGCTGTCAAATCGATTCC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRTVVT*SCQIDS
Trigger: GGAATCGATTTGACAGCTCCAAGTAACAACAGTTCG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAACAAGGACTATCTCTTaGCGAACTGTTGTTACTTGG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQTRTIS*RTVVTW
Trigger: CCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACAGAAAAGAGGAGTTaGGCCAACAGCCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTEKRS*ANSLRE
Trigger: CTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTGTTAGCCAGGAGATaGTCTCAATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVLARR*SQSPDL
Trigger: GAGGTCAGGAGATTGAGACCATCTCCTGGCTAACAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAAGGGGCAGTCTTGCTaGACGGTGCCCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTKGQSC*TVPCHV
Trigger: AACGTGGCAGGGCACCGTCCAGCAAGACTGCCCCTT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCTGCCCAGGCACAAATaGGCCACAAGGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMLPRHK*ATRAGY
Trigger: GTACCCTGCCCTTGTGGCCCATTTGTGCCTGGGCAG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTCTGCCCCATAAAGTaGGAGTCAGAAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLCPIK*ESERGL
Trigger: GAGCCCTCTTTCTGACTCCCACTTTATGGGGCAGAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGAGGAGGTAGAACCTaGCCAAAGTTTTATTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRGGRT*PKFYCR
Trigger: TCTGCAATAAAACTTTGGCCAGGTTCTACCTCCTCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGCAATGCAGTATCATTaGAACAGGGCGCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRAMQYH*NRAHPS
Trigger: TGAAGGGTGCGCCCTGTTCCAATGATACTGCATTGC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATCAATTCCGGACGCTTaGTACCGTGCTCCCACGAAA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSIPDA*YRAPTK
Trigger: TTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCATATCAAAAATGATTaGGATAATCAATTCCGGACG +
Preference number: 4 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCHIKND*DNQFRT
Trigger: CGTCCGGAATTGATTATCCCAATCATTTTTGATATG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAACTACAGCATCTGGATaGCGTAGGCCAATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQTTASG*RRPIFN
Trigger: ATTAAAAATTGGCCTACGTCATCCAGATGCTGTAGT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGATCTGCAGCTTGCTaGAACCGCTCTCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLRSAAC*NRSLAM
Trigger: CATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTTTCCACAGCATCCTaGCTTGTTATAAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALSTAS*LVIRLL
Trigger: CAGTAGCCTTATAACAAGTCAGGATGCTGTGGAAAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCTTTCTTCATCTGCTaGGCCCTTTCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSFFIC*ALSTAS
Trigger: GGATGCTGTGGAAAGGGCTCAGCAGATGAAGAAAGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCGAGCTGGCAGCTTCTaGGATGATAGCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARAGSF*DDSNIL
Trigger: AAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTACGTCCGAACTGTTaGATTGCTCTATCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVRPNC*IALSAL
Trigger: GAGCGCTGATAGAGCAATTCAACAGTTCGGACGTAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGTTCCTTATTTGCAATaGCAAGTAAAAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCVPYLQ*QVKAIV
Trigger: GACGATGGCTTTTACTTGTCATTGCAAATAAGGAAC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATCACGTTTGTGCCACTaGCAGATGCTAGAACACCCT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSRLCH*QMLEHP
Trigger: AGGGTGTTCTAGCATCTGTCAGTGGCACAAACGTGA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGGCTACCTGGAATGCTaGGACAACACACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSGYLEC*DNTQIL
Trigger: CAGAATTTGTGTGTTGTCTCAGCATTCCAGGTAGCC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCCAAACTAACTCGCTaGTTTTTGCAAGACCACAGT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAKLTR*FLQDHS
Trigger: ACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTGGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCCCAGAGATAACATCTaGGCTGCTTTAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSPRDNI*AALDSG
Trigger: TCCAGAGTCTAAAGCAGCTCAGATGTTATCTCTGGG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACTGCCCCTACTTCCATaGAGTGAGATGCAACAATCA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRLPLLP*SEMQQS
Trigger: TGATTGTTGCATCTCACTTCATGGAAGTAGGGGCAG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGCTGTAGCCCTGACATaGAACGCTTGCTACGTTTCT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELAVALT*NACYVS
Trigger: AGAAACGTAGCAAGCGTTTCATGTCAGGGCTACAGC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCACAGGTGCAAAATTGTaGACAAATACCCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCTGAKL*TNTQCL
Trigger: CAGACATTGGGTATTTGTTCACAATTTTGCACCTGT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATATTGGCATGTATTCTaGATAGGTTTCTGCATGACC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQYWHVF*IGFCMT
Trigger: GGTCATGCAGAAACCTATGCAGAATACATGCCAATA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATTCATAGATGATTCCTaGTATCGTCCTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQFIDDS*YRPSFS
Trigger: GGAAAAGGAAGGACGATAGCAGGAATCATCTATGAA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGCTTCCATCATCATTaGTCACAACCCGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELCFHHH*SQPVPC
Trigger: GCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAATCTTGTTTCAGCATaGTTCCAAAGACATGCACTG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQNLVSA*FQRHAL
Trigger: CAGTGCATGTCTTTGGAAGCATGCTGAAACAAGATT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKATEDRS*IRWAKC
Trigger: ACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTACAGATGGGGTTTTaGCATGTGGACCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVQMGF*HVDQAG
Trigger: ACCAGCCTGGTCCACATGGCAAAACCCCATCTGTAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCACTTAAAAGACACTaGATTTGTATCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSLKRH*ICIRQL
Trigger: CAGTTGTCTGATACAAATGCAGTGTCTTTTAAGTGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTTCTCACCAGGGGCCTaGAGAGTGGCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTFSPGA*RVAFTL
Trigger: CAGAGTGAAGGCCACTCTGCAGGCCCCTGGTGAGAA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTTCTCACCAGGGGCCTaGAGAGTGGCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMFSPGA*RVAFTL
Trigger: CAGAGTGAAGGCCACTCTGCAGGCCCCTGGTGAGAA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAAGGCCTTCAGTGTCTaGTGGCCAGAAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDKAFSV*WPETSA
Trigger: GGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGTAGGTACAGTCTCTaGTTCTTGTTTAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCSRYSL*FLFNRN
Trigger: GTTCCTGTTAAACAAGAACCAGAGACTGTACCTACT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTACTTGCCGCCAGACTaGCTTTCACCAATAAGTGAA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAYLPPD*LSPISE
Trigger: TTCACTTATTGGTGAAAGCCAGTCTGGCGGCAAGTA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTGCTAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALLSLS*LALKNQ
Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTAAAAGCCATCGTCTaGTCCTGTCAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVKAIV*SCQLSP
Trigger: TGGGCTGAGCTGACAGGACCAGACGATGGCTTTTAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATACAGAAAAGAGGAGTTaGGCCAACAGCCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDTEKRS*ANSLRE
Trigger: CTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCTGT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTACATCATAGGCCATaGGGGTTGTCACTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLHHRP*GLSLSC
Trigger: GCAGCTAAGTGACAACCCCCATGGCCTATGATGTAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTCTAACAGCATCCCATaGAGGCCAGCAAATGAATGC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSNSIP*RPANEC
Trigger: GCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTTTCTGCAGCAAAGTaGGCCGAGCGCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVSAAK*AERSTH
Trigger: GTGCGTACTGCGCTCGGCCCACTTTGCTGCAGAAAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGTGGAGGATGCACACTaGAGGCAATCTGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLVEDAH*RQSVTG
Trigger: GCCTGTCACAGATTGCCTCCAGTGTGCATCCTCCAC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTGAACTTGGTCTTTTaGAGGTGCAGAGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLNLVF*RCRGHG
Trigger: GCCATGACCTCTGCACCTTCAAAAGACCAAGTTCAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTACGTCCGAACTGTTaGATTGCTCTATCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVRPNC*IALSAL
Trigger: GAGCGCTGATAGAGCAATTCAACAGTTCGGACGTAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGCAGTAACTTGGTTTaGTCTATGAGTACGTCCGAA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASSNLV*SMSTSE
Trigger: TTCGGACGTACTCATAGATCAAACCAAGTTACTGCT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAAATAACGCATTCTGCTaGTGCACCTCCATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRNNAFC*CTSMPK
Trigger: TTTAGGCATGGAGGTGCATCAGCAGAATGCGTTATT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCAGATGAATTATACTaGTCTAACCAGTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAADELY*SNQCIR
Trigger: CCTGATGCACTGGTTAGATCAGTATAATTCATCTGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAHHQHC*FSVLLS
Trigger: AGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGGCTACCTGGAATGCTaGGACAACACACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTGYLEC*DNTQIL
Trigger: CAGAATTTGTGTGTTGTCTCAGCATTCCAGGTAGCC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAACAGAAGAGGACCTTaGATGCTGAAGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELNRRGP*MLKLHR
Trigger: CCTGTGAAGCTTCAGCATTCAAGGTCCTCTTCTGTT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACTGAAAACACGAACATaGTTTCCAACCAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQLKTRT*FPTKSL
Trigger: CAAAGATTTGGTTGGAAATCATGTTCGTGTTTTCAG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATATCTCATGCTAAAATaGAAGTGGAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRYLMLK*KWRGEG
Trigger: TCCCTCTCCCCTCCACTTTCATTTTAGCATGAGATA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTGCCCCTACTTCCATaGAGTGAGATGCAACAATCA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLPLLP*SEMQQS
Trigger: TGATTGTTGCATCTCACTTCATGGAAGTAGGGGCAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACCCACCTCTCATGGATaGTGGAAGATACAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELPTSHG*WKIQVV
Trigger: AACCACTTGTATCTTCCATCATCCATGAGAGGTGGG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAAACACACCAAGAGCTaGCATCCACCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAKHTKS*HPPLFQ
Trigger: TTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTTT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGTTACGCTTCACGGTTaGTCGTTTTTACTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAVTLHG*SFLLAR
Trigger: TCTTGCAAGTAAAAACGATCAACCGTGAAGCGTAAC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTGTTTAACAGGAACTaGTGCTTCGGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLFNRN*CFGLQT
Trigger: GGTTTGGAGACCGAAGCAGCAGTTCCTGTTAAACAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATACCCTCACCCCATATaGCAAGACGGTTCATATAGG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELYPHPI*QDGSYR
Trigger: CCTATATGAACCGTCTTGGCATATGGGGTGAGGGTA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGCATCAATCAGATCTaGAGCTTGCTGAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSINQI*SLLKPL
Trigger: GAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCCGAACTGTTGAATTaGTCTATCAGCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSELLN*SISAPR
Trigger: CCTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGCTGATGCACCTCCATaGCTAAAATTCTATTTAAGA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQADAPP*LKFYLR
Trigger: TCTTAAATAGAATTTTAGGCATGGAGGTGCATCAGC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCCTGTCTGTTCTTCATaGGTTGCTCAAGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSPVCSS*VAQVGD
Trigger: ATCACCAACTTGAGCAACGCATGAAGAACAGACAGG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDTHIPL*SPEVKA
Trigger: TGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACTCTGCCATTCTTACTaGAGGAGGGTTTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRLCHSY*RRVCNA
Trigger: AGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCCATTCACACTGGTTaGCTTTGTGAGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASIHTG*LCEVHF
Trigger: AAAATGGACCTCACAAAGGCAACCAGTGTGAATGGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAAGTTTGATCCCAAATaGACTGAAGAAGTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQKFDPK*TEEVRG
Trigger: TCCTCTAACTTCTTCAGTGCATTTGGGATCAAACTT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGGTCTGCGTGGAGGATaGACACTGGAGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMGLRGG*TLEAIC
Trigger: ACAGATTGCCTCCAGTGTGCATCCTCCACGCAGACC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTAGATGGAGGCTGCTaGCTCACATTTAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVDGGC*LTFNSA
Trigger: AGCACTATTAAATGTGAGGCAGCAGCCTCCATCTAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGTGCTTGCAGTAGTCTaGATAAACTTAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCVLAVV*INLVKV
Trigger: CACTTTAACTAAGTTTATCCAGACTACTGCAAGCAC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGCTGCTGTTGCTACTaGCTGAGCAATATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSCCCY*LSNISR
Trigger: CCTGCTAATATTGCTCAGCCAGTAGCAACAGCAGCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGGAACCTTCATGGTTaGGGAAAAACTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARNLHG*GKTPHL
Trigger: AAGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACAACAGGAACCTTCATaGTTGGGGAAAAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRQQEPS*LGKNSS
Trigger: TGAGGAGTTTTTCCCCAACCATGAAGGTTCCTGTTG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATAGGCCATGTTGCGTaGTTCAGAAGCACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDIGHVA*FRSTSC
Trigger: GCAACTGGTGCTTCTGAACCACGCAACATGGCCTAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAGAACTGACCCCACATaGACTTCTTCATTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSRTDPT*TSSFVA
Trigger: AGCAACGAATGAAGAAGTCCATGTGGGGTCAGTTCT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGGTGTTACTGTTAGCTaGTGTACTGTTAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTGVTVS*CTVRSR
Trigger: CCTGCTCCTAACAGTACACCAGCTAACAGTAACACC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGTAAAAGCCATCGTCTaGTCCTGTCAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLVKAIV*SCQLSP
Trigger: TGGGCTGAGCTGACAGGACCAGACGATGGCTTTTAC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTACCTCCCACAGCAATaGCATGGATGTACTGCGTTA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTYLPQQ*HGCTAL
Trigger: TAACGCAGTACATCCATGCCATTGCTGTGGGAGGTA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCSYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGAGACCTTGTGGTATaGAGGTTGCTAAATGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRDLVV*RLLNEG
Trigger: CCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATCCAGAGCAGTTGCTTaGCTCTCTTTTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSRAVA*LSFGGQ
Trigger: TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCCAGAGCAGTTGCTTaGCTCTCTTTTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSRAVA*LSFGGQ
Trigger: TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTTAGGGGCCCGCAGTaGAAAAGCCAGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVRGPQ*KSQTGS
Trigger: AGAACCTGTCTGGCTTTTCCACTGCGGGCCCCTAAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CCAGTAACTACAGACAGAGACCTTGTGGTATGGAGGTaGCTAAATGAGGGGAACACTAATTCCCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: PVTTDRDLVVWR*LNEGNTNSPRD
Trigger: ATCTCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCTGTCTGTAGTTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp GTATCACACAGGTACATGTGTATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAGGATCCAGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: VSHRYMCMGTFL*TACQEKDPEGT
Trigger: AGTTCCCTCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTGTGTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp ATATCAAAAATGATTGGGATAATCAATTCCGGACGCTaGGTACCGTGCTCCCACGAAAGGCTGGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ISKMIGIINSGR*VPCSHERLDAA
Trigger: TGCTGCATCCAGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATTTTTGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCACATTTTCCATTCTTaGTTTCCTCTCGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAHIFHS*FPLELV
Trigger: AACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAATGTTTTTCAATGAGTaGCTGCAACACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRMFFNE*LQHTFG
Trigger: GCCAAAGGTGTGTTGCAGTCACTCATTGAAAAACAT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELIVWRW*YHRRIQ
Trigger: TTGGATTCTCCTATGGTATCACCACCTCCAGACTAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAATAACGCATTCTGCTaGTGCACCTCCATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTNNAFC*CTSMPK
Trigger: TTTAGGCATGGAGGTGCATCAGCAGAATGCGTTATT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACACAATTTGCCGGAATaGTCAAACCTACAATCCGTT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRHNLPE*SNLQSV
Trigger: AACGGATTGTAGGTTTGATCATTCCGGCAAATTGTG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCACAATTTGCCGGAATaGTCAAACCTACAATCCGTT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSHNLPE*SNLQSV
Trigger: AACGGATTGTAGGTTTGATCATTCCGGCAAATTGTG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCGTTGCTCAAGTTGGTaGTGCTCTGAGGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMRCSSW*CSEGDA
Trigger: AGCATCACCCTCAGAGCATCACCAACTTGAGCAACG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTCTGAAGGTCACCAGTaGGGGCCTAAACAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTSEGHQ*GPKQES
Trigger: GGACTCTTGTTTAGGCCCTCACTGGTGACCTTCAGA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGCCAAACTAACTCGCTaGTTTTTGCAAGACCACAGT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELAKLTR*FLQDHS
Trigger: ACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTGGC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACCTACTTCCATGAAGTaGGATGCAACAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRPTSMK*DATIIS
Trigger: GGAAATGATTGTTGCATCTCACTTCATGGAAGTAGG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCAGCAGTCATACAATaGCAGTATCAGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSAVIQ*QYQKWH
Trigger: GTGCCATTTCTGATACTGTCATTGTATGACTGCTGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAAAACACACCAAGAGCTaGCATCCACCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRKHTKS*HPPLFQ
Trigger: TTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTTT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTATTGGCATGTATTCTaGATAGGTTTCTGCATGACC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAYWHVF*IGFCMT
Trigger: GGTCATGCAGAAACCTATGCAGAATACATGCCAATA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATTCATGTTGCTGGGCTaGATATGTAATTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRFMLLG*ICNCLK
Trigger: CTTGAGGCAATTACATATGCAGCCCAGCAACATGAA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTCATGTTGCTGGGCTaGATATGTAATTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSFMLLG*ICNCLK
Trigger: CTTGAGGCAATTACATATGCAGCCCAGCAACATGAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTCATAGATGATTCCTaGTATCGTCCTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAFIDDS*YRPSFS
Trigger: GGAAAAGGAAGGACGATAGCAGGAATCATCTATGAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAACACTAAACCACAATaGTCGTTTTCTACTCAACAA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCNTKPQ*SFSTQQ
Trigger: TTGTTGAGTAGAAAACGAGCATTGTGGTTTAGTGTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCTTCTCCTGTAGACTaGAGACCAATTACAACACAT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSASPVD*RPITTH
Trigger: ATGTGTTGTAATTGGTCTGCAGTCTACAGGAGAAGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGCTTCTCCTGTAGACTaGAGACCAATTACAACACAT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRASPVD*RPITTH
Trigger: ATGTGTTGTAATTGGTCTGCAGTCTACAGGAGAAGC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAAATCTTTGTTCTCCTaGCAGTTCAGATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCKSLFS*QFRYQK
Trigger: TTTCTGATATCTGAACTGGCAGGAGAACAAAGATTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACTTAGCCGCACGATCTaGATCTTCACGTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLSRTI*IFTFVP
Trigger: TGGCACAAACGTGAAGATGCAGATCGTGCGGCTAAG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACCTGTCTGTTCTTCATaGGTTGCTCAAGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELPVCSS*VAQVGD
Trigger: ATCACCAACTTGAGCAACGCATGAAGAACAGACAGG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRGLSLS*MLRILI
Trigger: TATGAGGATTCTTAGCATGCAGCTAAGTGACAACCC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGACCTTCCTCTTGACTaGTTGTCAAGAAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELDLPLD*LSRKGS
Trigger: GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAGGCTCCAGAGCAGTTaGTTGGCTCTCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRLQSS*LALFWR
Trigger: CCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGCTGCAATGGGAATCTaGTTGTCTCACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTAAMGI*LSHPPA
Trigger: TGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAGC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTACCCCAGGGACCAGTaGTGCAATGGGAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTYPRDQ*CNGNLL
Trigger: AAGCAGATTCCCATTGCAGCACTGGTCCCTGGGGTA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAAGGCCTTCAGTGTCTaGTGGCCAGAAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTKAFSV*WPETSA
Trigger: GGCAGATGTTTCTGGCCAGCAGACACTGAAGGCCTT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCCACGAAAGGCTGGATaGAGCAATGCAGTATCATTG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDPRKAG*SNAVSL
Trigger: CAATGATACTGCATTGCTGCATCCAGCCTTTCGTGG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCAGGACATAAGTTTTTaGCTTTATGACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: RKEELGQQPAREDPSQLCQDISF*LYDTHQ
Trigger: TTGATGAGTGTCATAAAGCCAAAAACTTATGTCCTG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCGAACTGTTGTTACTTaGAGCTGTCAAATCGATTCC +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSRTVVT*SCQIDS
Trigger: GGAATCGATTTGACAGCTCCAAGTAACAACAGTTCG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTACCTCCCACAGCAATaGCATGGATGTACTGCGTTA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDYLPQQ*HGCTAL
Trigger: TAACGCAGTACATCCATGCCATTGCTGTGGGAGGTA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTCTAACAGCATCCCATaGAGGCCAGCAAATGAATGC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSNSIP*RPANEC
Trigger: GCATTCATTTGCTGGCCTCCATGGGATGCTGTTAGA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGAGTGGCCTTCACTCTaGAGGACGCCTGAATTACAA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLEWPSL*RTPELQ
Trigger: TTGTAATTCAGGCGTCCTCCAGAGTGAAGGCCACTC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCTCTGCCCCATAAAGTaGGAGTCAGAAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTLCPIK*ESERGL
Trigger: GAGCCCTCTTTCTGACTCCCACTTTATGGGGCAGAG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGCTCCCACGAAAGGCTaGATGCAGCAATGCAGTATC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMAPTKG*MQQCSI
Trigger: GATACTGCATTGCTGCATCCAGCCTTTCGTGGGAGC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTCAATTCCGGACGCTTaGTACCGTGCTCCCACGAAA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTSIPDA*YRAPTK
Trigger: TTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CACAAGAGGATGAACGCCCTAAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATCTCACCCAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: HKRMNALSFQPG*SVLTHISPNSA
Trigger: TGCAGAATTGGGTGAGATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCTTAGGGCGTTCATCCTCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp AGTCCAGAGCAAACATTACATCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTAAGAATCCTCATATGC +
Preference number: 4 (lower is better)
Translates to: SPEQTLHHRPWG*SLSCMLRILIC
Trigger: GCATATGAGGATTCTTAGCATGCAGCTAAGTGACAACCCCCATGGCCTATGATGTAATGTTTGCTCTGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp CCAAGAGCTGACATCCACCTTTGTTTCAAGTTGTCTTaGGATCCCATCAGATGTTGTCTCCAGATGCACCAT +
Preference number: 4 (lower is better)
Translates to: PRADIHLCFKLS*DPIRCCLQMHH
Trigger: ATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGAAACAAAGGTGGATGTCAGCTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTTGGCAATTTGTTCTaGAGCTCTAAAACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAFGNLF*SSKTAK
Trigger: CTTAGCAGTTTTAGAGCTTCAGAACAAATTGCCAAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTTTCCACAGCATCCTaGCTTGTTATAAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLSTAS*LVIRLL
Trigger: CAGTAGCCTTATAACAAGTCAGGATGCTGTGGAAAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTATCAAGTTCAGATCTTaGCTCATAAGATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAIKFRS*LIRYAS
Trigger: GGAAGCATATCTTATGAGTCAAGATCTGAACTTGAT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGTACGTCCGAACTGTTaGATTGCTCTATCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTVRPNC*IALSAL
Trigger: GAGCGCTGATAGAGCAATTCAACAGTTCGGACGTAC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATACGTGGCCAGAGGTTaGATATCCTGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLYVARG*ISWSQK
Trigger: TTTCTGACTCCAGGATATTCAACCTCTGGCCACGTA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCATCAGGGCATCATCTaGGACGACCTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTHQGII*DDLLIF
Trigger: AAATATAAGAAGGTCGTCTCAGATGATGCCCTGATG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCACCATCAGCACTGCTaGTTTTCAGTTTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTHHQHC*FSVLLS
Trigger: AGATAGCAAAACTGAAAATCAGCAGTGCTGATGGTG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTGCCATTGGGAGGCCTaGACTAATCAAACGTTCATT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDCHWEA*TNQTFI
Trigger: AATGAACGTTTGATTAGTTCAGGCCTCCCAATGGCA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATGGAGTTGCAAGCCCTaGATCTCCACCATCAATATC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLWSCKP*ISTINI
Trigger: GATATTGATGGTGGAGATGCAGGGCTTGCAACTCCA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGTTAAAGTGATGGTTTaGCTGTTGGTTGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSVKVMV*LLVVTG
Trigger: ACCTGTAACAACCAACAGGCAAACCATCACTTTAAC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCATCAGTAGCTGCTGTTaGTACTGGCTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTISSCC*YWLSNI
Trigger: AATATTGCTCAGCCAGTAGCAACAGCAGCTACTGAT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATTCTGCATAGGTTTCTaGATGACCCATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRFCIGF*MTHFFF
Trigger: GAAGAAGAAATGGGTCATGCAGAAACCTATGCAGAA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATACCCTCACCCCATATaGCAAGACGGTTCATATAGG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLYPHPI*QDGSYR
Trigger: CCTATATGAACCGTCTTGGCATATGGGGTGAGGGTA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGCATCAATCAGATCTaGAGCTTGCTGAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSINQI*SLLKPL
Trigger: GAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGGAGACACACAATTTaGCGGAATGATCAAACCTAC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRRHTI*RNDQTY
Trigger: GTAGGTTTGATCATTCCGGCAAATTGTGTGTCTCCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACACACATCCCCCTCTaGTCACCCGAAGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTHIPL*SPEVKA
Trigger: TGCTTTTACTTCGGGTGAGCAGAGGGGGATGTGTGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTATACACACACTACATTaGTTTGGATGCAGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAIHTLH*FGCRFL
Trigger: TAAGAACCTGCATCCAAAGCAATGTAGTGTGTGTAT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTAGCGAGCTTGAGTTaGAGGTATTTAGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLASLS*RYLGVF
Trigger: AAACACACCTAAATACCTGCAACTCAAGCTCGCTAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATGGCCAAAGTTTTATTaGAGAGATACAGTGTACCTC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRWPKFY*RDTVYL
Trigger: GAGGTACACTGTATCTCTGCAATAAAACTTTGGCCA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTGCTAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLLSLS*LALKNQ
Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGGTGTTACTGTTAGCTaGTGTACTGTTAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLGVTVS*CTVRSR
Trigger: CCTGCTCCTAACAGTACACCAGCTAACAGTAACACC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGTGTATAATTCTACGTaGCCAGAGGTTGAATATCCT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSVYNST*PEVEYP
Trigger: AGGATATTCAACCTCTGGCCACGTAGAATTATACAC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGTGTATAATTCTACGTaGCCAGAGGTTGAATATCCT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRVYNST*PEVEYP
Trigger: AGGATATTCAACCTCTGGCCACGTAGAATTATACAC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCCCACAGCAATGGCATaGATGTACTGCGTTAACCCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMPTAMA*MYCVNP
Trigger: AGGGTTAACGCAGTACATCCATGCCATTGCTGTGGG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGTGTTAGCCAGGAGATaGTCTCAATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTVLARR*SQSPDL
Trigger: GAGGTCAGGAGATTGAGACCATCTCCTGGCTAACAC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGAGTGGCCTTCACTCTaGAGGACGCCTGAATTACAA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTEWPSL*RTPELQ
Trigger: TTGTAATTCAGGCGTCCTCCAGAGTGAAGGCCACTC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGAGGAGGTAGAACCTaGCCAAAGTTTTATTGCAGA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTRGGRT*PKFYCR
Trigger: TCTGCAATAAAACTTTGGCCAGGTTCTACCTCCTCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp AACACACCAAGAGCTGACATCCACCTTTGTTTCAAGTaGTCTTTGGATCCCATCAGATGTTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: NTPRADIHLCFK*SLDPIRCCLQM
Trigger: CATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGAAACAAAGGTGGATGTCAGCTCTTGGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAAGTAGATCTTTAAGCTaGACTTGGTCTTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSRSLS*TWSFEG
Trigger: ACCTTCAAAAGACCAAGTTCAGCTTAAAGATCTACT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACATCTAAAAATGGGTTaGAATCGTCATCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELHLKMG*NRHHLQ
Trigger: CTGGAGATGATGACGATTTCAACCCATTTTTAGATG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGATGTATTCATTACCTTaGCCAGAAACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMMYSLP*PETQGR
Trigger: CCTGCCCTGGGTTTCTGGTCAAGGTAATGAATACAT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAACACACACATGAGCTaGGAAGTTCTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMNTHMS*EVLLKV
Trigger: CACCTTCAGCAGAACTTCTCAGCTCATGTGTGTGTT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAACACACACATGAGCTaGGAAGTTCTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTNTHMS*EVLLKV
Trigger: CACCTTCAGCAGAACTTCTCAGCTCATGTGTGTGTT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCCCAGAGATAACATCTaGGCTGCTTTAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTPRDNI*AALDSG
Trigger: TCCAGAGTCTAAAGCAGCTCAGATGTTATCTCTGGG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAAACTTGTACATGAATaGAAAGGCCCCAAAGACGCT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDKLVHE*KGPKDA
Trigger: AGCGTCTTTGGGGCCTTTTCATTCATGTACAAGTTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTTTAGTTCCCAAGACTaGTCCAAATACAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSFSSQD*SKYRML
Trigger: AAGCATTCTGTATTTGGATCAGTCTTGGGAACTAAA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTGGAGTTGCAAGCCCTaGATCTCCACCATCAATATC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTWSCKP*ISTINI
Trigger: GATATTGATGGTGGAGATGCAGGGCTTGCAACTCCA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTATTGGCATGTATTCTaGATAGGTTTCTGCATGACC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTYWHVF*IGFCMT
Trigger: GGTCATGCAGAAACCTATGCAGAATACATGCCAATA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTCATGTTGCTGGGCTaGATATGTAATTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDFMLLG*ICNCLK
Trigger: CTTGAGGCAATTACATATGCAGCCCAGCAACATGAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCCTCTCCGTTCTACTaGTTGAATAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSSPFY*LNKITE
Trigger: TTCAGTGATTTTATTCAAGCAGTAGAACGGAGAGGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTCCTCTCCGTTCTACTaGTTGAATAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSSPFY*LNKITE
Trigger: TTCAGTGATTTTATTCAAGCAGTAGAACGGAGAGGA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTTTCAATGAGTGACTaGAACACACCTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELFSMSD*NTPLAV
Trigger: AACTGCCAAAGGTGTGTTGCAGTCACTCATTGAAAA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATCTCTAGATTCTGTTaGCCTTCTATCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELISRFC*PSITMC
Trigger: ACACATGGTGATAGAAGGGCAACAGAATCTAGAGAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCTGATGCACCTCCATaGCTAAAATTCTATTTAAGA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSADAPP*LKFYLR
Trigger: TCTTAAATAGAATTTTAGGCATGGAGGTGCATCAGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAAACCTACAATCCGTTaGCCATCTTCCGTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLKPTIR*PSSVLS
Trigger: GCTAAGAACGGAAGATGGGCAACGGATTGTAGGTTT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGGAGACACACAATTTaGCGGAATGATCAAACCTAC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRRHTI*RNDQTY
Trigger: GTAGGTTTGATCATTCCGGCAAATTGTGTGTCTCCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTCCATTCACACTGGTTaGCTTTGTGAGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSIHTG*LCEVHF
Trigger: AAAATGGACCTCACAAAGGCAACCAGTGTGAATGGA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGTGGCATTTAGATCCTaGAATGAATGGACCTATTTT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSVAFRS*NEWTYF
Trigger: AAAATAGGTCCATTCATTGCAGGATCTAAATGCCAC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCATACACACACTACATTaGTTTGGATGCAGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSIHTLH*FGCRFL
Trigger: TAAGAACCTGCATCCAAAGCAATGTAGTGTGTGTAT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGGCCAAAGTTTTATTaGAGAGATACAGTGTACCTC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELWPKFY*RDTVYL
Trigger: GAGGTACACTGTATCTCTGCAATAAAACTTTGGCCA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCCACGAAAGGCTGGATaGAGCAATGCAGTATCATTG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMPRKAG*SNAVSL
Trigger: CAATGATACTGCATTGCTGCATCCAGCCTTTCGTGG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGTAGGTACAGTCTCTaGTTCTTGTTTAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSRYSL*FLFNRN
Trigger: GTTCCTGTTAAACAAGAACCAGAGACTGTACCTACT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAGCTGCTGTTGCTACTaGCTGAGCAATATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMSCCCY*LSNISR
Trigger: CCTGCTAATATTGCTCAGCCAGTAGCAACAGCAGCT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACCAGCCATTATCAATaGTTTCCTCAGAAATGGATG +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTSHYQ*FPQKWM
Trigger: CATCCATTTCTGAGGAAACCATTGATAATGGCTGGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACTGAATTCTCTAAATaGAGTACCCTCACCCCATAT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTEFSK*STLTPY
Trigger: ATATGGGGTGAGGGTACTCCATTTAGAGAATTCAGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCACTGCAACACACCTTTaGCAGTTGAAACAAAATCAT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSTATHL*QLKQNH
Trigger: ATGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAACTGCAACACACCTTTaGCAGTTGAAACAAAATCAT +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRTATHL*QLKQNH
Trigger: ATGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTGTATAATTCTACGTaGCCAGAGGTTGAATATCCT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVYNST*PEVEYP
Trigger: AGGATATTCAACCTCTGGCCACGTAGAATTATACAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACCTAACAAGGGAAACTaGCTGATACAAAATGGATCA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELPNKGN*LIQNGS
Trigger: TGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTTACATCATAGGCCATaGGGGTTGTCACTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTLHHRP*GLSLSC
Trigger: GCAGCTAAGTGACAACCCCCATGGCCTATGATGTAA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCATATCAAAAATGATTaGGATAATCAATTCCGGACG +
Preference number: 4 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAHIKND*DNQFRT
Trigger: CGTCCGGAATTGATTATCCCAATCATTTTTGATATG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGTAGATCTTTAAGCTaGACTTGGTCTTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSRSLS*TWSFEG
Trigger: ACCTTCAAAAGACCAAGTTCAGCTTAAAGATCTACT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACTATGCATAAGTATTTaGAGAACCTCTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLCISI*RTSGEQ
Trigger: CTGCTCACCAGAGGTTCTTCAAATACTTATGCATAG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCATCTAAAAATGGGTTaGAATCGTCATCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDHLKMG*NRHHLQ
Trigger: CTGGAGATGATGACGATTTCAACCCATTTTTAGATG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCATCAAGTTCAGATCTTaGCTCATAAGATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTIKFRS*LIRYAS
Trigger: GGAAGCATATCTTATGAGTCAAGATCTGAACTTGAT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCGAGCTGGCAGCTTCTaGGATGATAGCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMRAGSF*DDSNIL
Trigger: AAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTIVWRW*YHRRIQ
Trigger: TTGGATTCTCCTATGGTATCACCACCTCCAGACTAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAATAACGCATTCTGCTaGTGCACCTCCATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTNNAFC*CTSMPK
Trigger: TTTAGGCATGGAGGTGCATCAGCAGAATGCGTTATT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTTCCTTATTTGCAATaGCAAGTAAAAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVPYLQ*QVKAIV
Trigger: GACGATGGCTTTTACTTGTCATTGCAAATAAGGAAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCAGATGAATTATACTaGTCTAACCAGTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLADELY*SNQCIR
Trigger: CCTGATGCACTGGTTAGATCAGTATAATTCATCTGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACACAATTTGCCGGAATaGTCAAACCTACAATCCGTT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLHNLPE*SNLQSV
Trigger: AACGGATTGTAGGTTTGATCATTCCGGCAAATTGTG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDIKQGL*IQVWHL
Trigger: TAAATGCCACACCTGAATTCAGAGGCCTTGTTTAAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTGCCATTGGGAGGCCTaGACTAATCAAACGTTCATT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTCHWEA*TNQTFI
Trigger: AATGAACGTTTGATTAGTTCAGGCCTCCCAATGGCA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTTAAAGTGATGGTTTaGCTGTTGGTTGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVKVMV*LLVVTG
Trigger: ACCTGTAACAACCAACAGGCAAACCATCACTTTAAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATCAGTAGCTGCTGTTaGTACTGGCTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLISSCC*YWLSNI
Trigger: AATATTGCTCAGCCAGTAGCAACAGCAGCTACTGAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGGAAAGTTTCATGTTaGTGGGCTGCATATGTAATT +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRKVSC*WAAYVI
Trigger: AATTACATATGCAGCCCAGCAACATGAAACTTTCCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCCTCTCCGTTCTACTaGTTGAATAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSSPFY*LNKITE
Trigger: TTCAGTGATTTTATTCAAGCAGTAGAACGGAGAGGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTTTCAATGAGTGACTaGAACACACCTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDFSMSD*NTPLAV
Trigger: AACTGCCAAAGGTGTGTTGCAGTCACTCATTGAAAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATTTAGCAACAATAGATaGAAATCTTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRFSNNR*KSLFSC
Trigger: GCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATCACCATGTGTAAGTaGCCCCAAACTCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTITMCK*PQTLKS
Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAAACCTACAATCCGTTaGCCATCTTCCGTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTKPTIR*PSSVLS
Trigger: GCTAAGAACGGAAGATGGGCAACGGATTGTAGGTTT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCATCTCACCCAATTCTaGAAGAAGTTTACAAACAAT +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSHLTQF*KKFTNN
Trigger: ATTGTTTGTAAACTTCTTGCAGAATTGGGTGAGATG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTACTGAGGATAGAAGTTaGATCCGCTGGGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTTEDRS*IRWAKC
Trigger: ACATTTTGCCCAGCGGATGCAACTTCTATCCTCAGT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTACAAAATGGATCACTaGCTGAGATATATGAACTGG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTYKMDH*LRYMNW
Trigger: CCAGTTCATATATCTCAGGCAGTGATCCATTTTGTA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCTCTGCCATTCTTACTaGAGGAGGGTTTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTLCHSY*RRVCNA
Trigger: AGCATTACAAACCCTCCTGCAGTAAGAATGGCAGAG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATACACACACTACATTaGTTTGGATGCAGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELIHTLH*FGCRFL
Trigger: TAAGAACCTGCATCCAAAGCAATGTAGTGTGTGTAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTCACTTAAAAGACACTaGATTTGTATCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSSLKRH*ICIRQL
Trigger: CAGTTGTCTGATACAAATGCAGTGTCTTTTAAGTGA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCACTTAAAAGACACTaGATTTGTATCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSLKRH*ICIRQL
Trigger: CAGTTGTCTGATACAAATGCAGTGTCTTTTAAGTGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAAGTTTGATCCCAAATaGACTGAAGAAGTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTKFDPK*TEEVRG
Trigger: TCCTCTAACTTCTTCAGTGCATTTGGGATCAAACTT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTTTATCCTCTTCAGTaGCATAAATACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLYPLQ*HKYCHS
Trigger: GCTGTGACAGTATTTATGGCACTGAAGAGGATAAAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCAACAGGAACCTTCATaGTTGGGGAAAAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMQQEPS*LGKNSS
Trigger: TGAGGAGTTTTTCCCCAACCATGAAGGTTCCTGTTG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCACTGGATAAAGAGCTaGTTTCCACTACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTHWIKS*FPLQHL
Trigger: CAGATGCTGTAGTGGAAACCAGCTCTTTATCCAGTG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAAAGTTTCATGTTGCTaGGCTGCATATGTAATTGCC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDKVSCC*AAYVIA
Trigger: GGCAATTACATATGCAGCCCAGCAACATGAAACTTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTACTTGCCGCCAGACTaGCTTTCACCAATAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMYLPPD*LSPISE
Trigger: TTCACTTATTGGTGAAAGCCAGTCTGGCGGCAAGTA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCTGCTAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMLLSLS*LALKNQ
Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDNNSGF*QFVLKL
Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAAAGTAAAGCCAGTTTaGGAAGTTCCAAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSKVKPV*EVPSIL
Trigger: TAAAATGCTTGGAACTTCCCAAACTGGCTTTACTTT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCCTAACAAGGGAAACTaGCTGATACAAAATGGATCA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDPNKGN*LIQNGS
Trigger: TGATCCATTTTGTATCAGCCAGTTTCCCTTGTTAGG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCACACTACATTGCTTTaGATGCAGGTTCTTACTAAT +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTHTTLL*MQVLTN
Trigger: ATTAGTAAGAACCTGCATCCAAAGCAATGTAGTGTG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGATTTTCCTATCAGGTaGGAAGACAGAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTDFPIR*EDRDKK
Trigger: TTTCTTATCTCTGTCTTCCCACCTGATAGGAAAATC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
3UTR CAA 72 bp AGGAGAACCATCTACACCTACATAGAAAAGTATCCTTaGCTCAGAGGAGGTAGAACCTGGCCAAAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: RRTIYTYIEKYP*LRGGRTWPKFY
Trigger: ATAAAACTTTGGCCAGGTTCTACCTCCTCTGAGCAAAGGATACTTTTCTATGTAGGTGTAGATGGTTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATGTTTTTCAATGAGTaGCTGCAACACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTMFFNE*LQHTFG
Trigger: GCCAAAGGTGTGTTGCAGTCACTCATTGAAAAACAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATATCAAGTTCAGATCTTaGCTCATAAGATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDIKFRS*LIRYAS
Trigger: GGAAGCATATCTTATGAGTCAAGATCTGAACTTGAT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAAACTTGTACATGAATaGAAAGGCCCCAAAGACGCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMKLVHE*KGPKDA
Trigger: AGCGTCTTTGGGGCCTTTTCATTCATGTACAAGTTT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAATGAAACTTGTACATaGATGAAAAGGCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDNETCT*MKRPQR
Trigger: TCTTTGGGGCCTTTTCATTCATGTACAAGTTTCATT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTACTCTGGAGGACGCCTaGATTACAAGTATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTTLEDA*ITSIKK
Trigger: CTTTTTGATACTTGTAATTCAGGCGTCCTCCAGAGT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGGAAAGTTTCATGTTaGTGGGCTGCATATGTAATT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRKVSC*WAAYVI
Trigger: AATTACATATGCAGCCCAGCAACATGAAACTTTCCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTCATAGATGATTCCTaGTATCGTCCTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLFIDDS*YRPSFS
Trigger: GGAAAAGGAAGGACGATAGCAGGAATCATCTATGAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGACTTCTTCATTCGTTaGTCAGCATCAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLDFFIR*SASIRS
Trigger: AGATCTGATTGATGCTGAGCAACGAATGAAGAAGTC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTCCTCTCGAGCTAGTTaGACAACCCTTTTAACTTTG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMSSRAS*TTLLTL
Trigger: CAAAGTTAAAAGGGTTGTGCAACTAGCTCGAGAGGA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTTGACTCATAAGATATaGTTCCATCATCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTLTHKI*FHHHCS
Trigger: TGAGCAATGATGATGGAAGCATATCTTATGAGTCAA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAGGAGACACACAATTTaGCGGAATGATCAAACCTAC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMRRHTI*RNDQTY
Trigger: GTAGGTTTGATCATTCCGGCAAATTGTGTGTCTCCT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCCTGAATGCATGATATaGAACCTTTCATTTCATGCT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDPECMI*NLSFHA
Trigger: AGCATGAAATGAAAGGTTGCATATCATGCATTCAGG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAATCTTGTTTCAGCATaGTTCCAAAGACATGCACTG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLNLVSA*FQRHAL
Trigger: CAGTGCATGTCTTTGGAAGCATGCTGAAACAAGATT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGGGTTGTCACTTAGCTaGATGCTAAGAATCCTCATA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMGLSLS*MLRILI
Trigger: TATGAGGATTCTTAGCATGCAGCTAAGTGACAACCC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTGGCATTTAGATCCTaGAATGAATGGACCTATTTT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVAFRS*NEWTYF
Trigger: AAAATAGGTCCATTCATTGCAGGATCTAAATGCCAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATGGCCAAAGTTTTATTaGAGAGATACAGTGTACCTC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLWPKFY*RDTVYL
Trigger: GAGGTACACTGTATCTCTGCAATAAAACTTTGGCCA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTGCTTGCAGTAGTCTaGATAAACTTAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVLAVV*INLVKV
Trigger: CACTTTAACTAAGTTTATCCAGACTACTGCAAGCAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCGAACTGTTGTTACTTaGAGCTGTCAAATCGATTCC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMRTVVT*SCQIDS
Trigger: GGAATCGATTTGACAGCTCCAAGTAACAACAGTTCG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACAAGGACTATCTCTTaGCGAACTGTTGTTACTTGG +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTRTIS*RTVVTW
Trigger: CCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 4 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCATATCAAAAATGATTaGGATAATCAATTCCGGACG +
Preference number: 4 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTHIKND*DNQFRT
Trigger: CGTCCGGAATTGATTATCCCAATCATTTTTGATATG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTACTACAGCATCTGGATaGCGTAGGCCAATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTTTASG*RRPIFN
Trigger: ATTAAAAATTGGCCTACGTCATCCAGATGCTGTAGT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTTGGCAATTTGTTCTaGAGCTCTAAAACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLFGNLF*SSKTAK
Trigger: CTTAGCAGTTTTAGAGCTTCAGAACAAATTGCCAAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCACATTTTCCATTCTTaGTTTCCTCTCGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTHIFHS*FPLELV
Trigger: AACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCACATTTTCCATTCTTaGTTTCCTCTCGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMHIFHS*FPLELV
Trigger: AACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCGATTGTTTGCAAGATaGAAGCCAATTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRLFAR*KPICTS
Trigger: GGAAGTACAAATTGGCTTTCATCTTGCAAACAATCG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATTAAACAAGGCCTCTaGATTCAGGTGTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTIKQGL*IQVWHL
Trigger: TAAATGCCACACCTGAATTCAGAGGCCTTGTTTAAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTACAGGTGCAAAATTGTaGACAAATACCCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTTGAKL*TNTQCL
Trigger: CAGACATTGGGTATTTGTTCACAATTTTGCACCTGT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAATGAAACTTGTACATaGATGAAAAGGCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLNETCT*MKRPQR
Trigger: TCTTTGGGGCCTTTTCATTCATGTACAAGTTTCATT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTTAAAGTGATGGTTTaGCTGTTGGTTGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVKVMV*LLVVTG
Trigger: ACCTGTAACAACCAACAGGCAAACCATCACTTTAAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTTCAGAAGCACCAGTTaGACTAGCATAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTFRSTS*TSINNS
Trigger: AGAGTTGTTTATGCTAGTGCAACTGGTGCTTCTGAA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGACTTCTTCATTCGTTaGTCAGCATCAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMDFFIR*SASIRS
Trigger: AGATCTGATTGATGCTGAGCAACGAATGAAGAAGTC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGATCTCTAGATTCTGTTaGCCTTCTATCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMISRFC*PSITMC
Trigger: ACACATGGTGATAGAAGGGCAACAGAATCTAGAGAT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAATCTTGTTTCAGCATaGTTCCAAAGACATGCACTG +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTNLVSA*FQRHAL
Trigger: CAGTGCATGTCTTTGGAAGCATGCTGAAACAAGATT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTCCATGAAGTGAGATaGAACAATCATTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDFHEVR*NNHFQS
Trigger: AGATTGGAAATGATTGTTGCATCTCACTTCATGGAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCTTTATCCTCTTCAGTaGCATAAATACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTLYPLQ*HKYCHS
Trigger: GCTGTGACAGTATTTATGGCACTGAAGAGGATAAAG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMNNSGF*QFVLKL
Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTACTGAATTCTCTAAATaGAGTACCCTCACCCCATAT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTTEFSK*STLTPY
Trigger: ATATGGGGTGAGGGTACTCCATTTAGAGAATTCAGT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAAAGTAAAGCCAGTTTaGGAAGTTCCAAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDKVKPV*EVPSIL
Trigger: TAAAATGCTTGGAACTTCCCAAACTGGCTTTACTTT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACACACTACATTGCTTTaGATGCAGGTTCTTACTAAT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLHTTLL*MQVLTN
Trigger: ATTAGTAAGAACCTGCATCCAAAGCAATGTAGTGTG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTAGAGGGTGGGTTTTaGATTTTATCTCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLEGGF*ILSQVL
Trigger: GAGTACTTGAGATAAAATCCAAAACCCACCCTCTAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCTCCGTTCTACTGCTTaGATAAAATCACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMLRSTA*IKSLNS
Trigger: AGAATTCAGTGATTTTATTCAAGCAGTAGAACGGAG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR TCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAATGAAACTTGTACATaGATGAAAAGGCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMNETCT*MKRPQR
Trigger: TCTTTGGGGCCTTTTCATTCATGTACAAGTTTCATT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAACACTAAACCACAATaGTCGTTTTCTACTCAACAA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLNTKPQ*SFSTQQ
Trigger: TTGTTGAGTAGAAAACGAGCATTGTGGTTTAGTGTT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTGACTCATAAGATATaGTTCCATCATCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLTHKI*FHHHCS
Trigger: TGAGCAATGATGATGGAAGCATATCTTATGAGTCAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATTTAGCAACAATAGATaGAAATCTTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLFSNNR*KSLFSC
Trigger: GCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGCTGATGCACCTCCATaGCTAAAATTCTATTTAAGA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTADAPP*LKFYLR
Trigger: TCTTAAATAGAATTTTAGGCATGGAGGTGCATCAGC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATTTCTAATTTGAGCTaGTTCCCAGTATTTGGTCGA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTISNLS*FPVFGR
Trigger: TCGACCAAATACTGGGAAGCAGCTCAAATTAGAAAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATGCTTCCAAAGACATaGACTGTCAGAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLMLPKT*TVRTKI
Trigger: AATTTTTGTTCTGACAGTGCATGTCTTTGGAAGCAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACTGCAACACACCTTTaGCAGTTGAAACAAAATCAT +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTATHL*QLKQNH
Trigger: ATGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATTTTAAACCAACTGTaGTCTGTAGCCTTTAACACA +
Preference number: 4 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLILNQL*SVAFNT
Trigger: TGTGTTAAAGGCTACAGACCACAGTTGGTTTAAAAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTCCTATTTATCAAGATaGCTAGTCCAGAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTSYLSR*LVQSKH
Trigger: ATGTTTGCTCTGGACTAGCCATCTTGATAAATAGGA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAGATCCTGCAATGAATaGACCTATTTTACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRSCNE*TYFTEV
Trigger: GACTTCTGTAAAATAGGTCCATTCATTGCAGGATCT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTTAGAGGGTGGGTTTTaGATTTTATCTCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTLEGGF*ILSQVL
Trigger: GAGTACTTGAGATAAAATCCAAAACCCACCCTCTAA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAAATCTTTGTTCTCCTaGCAGTTCAGATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSKSRWELSGEKLKERHMKSLFS*QFRYQK
Trigger: TTTCTGATATCTGAACTGGCAGGAGAACAAAGATTT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR GCA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAGAATCCTCATATGCTaGTTTGAAAACGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRILIC*FENAIK
Trigger: TTTTATGGCGTTTTCAAAGCAGCATATGAGGATTCT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCG +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSRCPAT*RQPRWP
Trigger: CGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGGATCCCATCAGATGTaGTCTCCAGATGCACCATGT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASGSHQM*SPDAPC
Trigger: ACATGGTGCATCTGGAGACAACATCTGATGGGATCC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGTGATGGTTTGCCTGTaGGTTGTTACAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASVMVCL*VVTGGV
Trigger: AACACCACCTGTAACAACCAACAGGCAAACCATCAC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCCACGGTGTCTGCCTTaGCCATTGGGAGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCPRCLP*PLGGLN
Trigger: GTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTACAGTCTCTGGTTCTaGTTTAACAGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASYSLWF*FNRNCC
Trigger: GCAGCAGTTCCTGTTAAACAAGAACCAGAGACTGTA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCGGACTTCTTCATTCGTaGCTCAGCATCAATCAGATC +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASGLLHS*LSINQI
Trigger: GATCTGATTGATGCTGAGCAACGAATGAAGAAGTCC...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGCTCAGCCCAAATCTaGGTAGCTTCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSSAQI*VASSHD
Trigger: GTCATGGGAGGAAGCTACCAAGATTTGGGCTGAGCT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTA +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSHRPWG*SLSCML
Trigger: TAGCATGCAGCTAAGTGACAACCCCCATGGCCTATG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCCACGGTGTCTGCCTTaGCCATTGGGAGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHPRCLP*PLGGLN
Trigger: GTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGAACACCCTCAACTTTaGTCCAGACACTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSEHPQL*SRHSAL
Trigger: CAGTGCTGAGTGTCTGGACAAAAGTTGAGGGTGTTC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCAAAATGCTAGCGAGCTaGAGTTGCAGGTATTTAGGT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASKMLAS*SCRYLG
Trigger: ACCTAAATACCTGCAACTCAAGCTCGCTAGCATTTT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRCPAT*RQPRWP
Trigger: CGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCGGTGCCCTGCCACGTaGCGGCAGCCCAGATGGCCG +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTRCPAT*RQPRWP
Trigger: CGGCCATCTGGGCTGCCGCAACGTGGCAGGGCACCG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCTGGCCAAAGTTTTATaGCAGAGATACAGTGTACCT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASLAKVL*QRYSVP
Trigger: AGGTACACTGTATCTCTGCAATAAAACTTTGGCCAG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCCACCTTTGTTTCAAGTaGTCTTTGGATCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASHLCFK*SLDPIR
Trigger: TCTGATGGGATCCAAAGACAACTTGAAACAAAGGTG...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATCAATTCCGGACGCTaGGTACCGTGCTCCCACGAA +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCINSGR*VPCSHE
Trigger: TTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAACCGGGAGGTGTGAGTTaGAAGGACCAGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQPGGVS*KDQRRL
Trigger: CAGTCGCCTCTGGTCCTTCAAACTCACACCTCCCGG...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTGGCATTTCGTACTGTaGGTGCTGAGACTGACGGGC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHWHFVL*VLRLTG
Trigger: GCCCGTCAGTCTCAGCACCAACAGTACGAAATGCCA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCTTCTTTACTGTACCATaGCTTACATCAGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASFFTVP*LTSVAA
Trigger: AGCAGCTACTGATGTAAGCAATGGTACAGTAAAGAA...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCCTAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSLSLSW*ALKNQQ
Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAG...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAATCAGATCTGCAGCTaGCTGAAACCGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHNQICS*LKPLSG
Trigger: GCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCGGACTTCTTCATTCGTaGCTCAGCATCAATCAGATC +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSGLLHS*LSINQI
Trigger: GATCTGATTGATGCTGAGCAACGAATGAAGAAGTCC...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCCACGTTGCGGCAGCCCAGATGGCCGCACTGCCAACCACAGCACGGCTTCCACTTTTCGTGCTTTTTaGGCTTCTCGAGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: LPRCGSPDGRTANHSTASTFRAF*ASRVIS
Trigger: AGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAGT...GGAAGCCGTGCTGTGGTTGGCAGTGCGGCCATCTGGGCTGCCGCAACGTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGTCCGAACTGTTGAATaGCTCTATCAGCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCVRTVE*LYQRSK
Trigger: CTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGAC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGCTCAGCCCAAATCTaGGTAGCTTCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLSSAQI*VASSHD
Trigger: GTCATGGGAGGAAGCTACCAAGATTTGGGCTGAGCT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTATGTATTCATTACCTaGACCAGAAACCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSYVFIT*TRNPGQ
Trigger: CTGCCCTGGGTTTCTGGTCAAGGTAATGAATACATA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCGGATCCCATCAGATGTaGTCTCCAGATGCACCATGT +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCGSHQM*SPDAPC
Trigger: ACATGGTGCATCTGGAGACAACATCTGATGGGATCC...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAGCAATGCAGTATCATaGGAACAGGGCGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSNAVS*EQGAPF
Trigger: GAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCCGGGAGGTGTGAGTTaGAAGGACCAGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAPGGVS*KDQRRL
Trigger: CAGTCGCCTCTGGTCCTTCAAACTCACACCTCCCGG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATGGCATTTCGTACTGTaGGTGCTGAGACTGACGGGC +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQWHFVL*VLRLTG
Trigger: GCCCGTCAGTCTCAGCACCAACAGTACGAAATGCCA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCACTGCTAAGCCTGTCTaGGTTGGCTTTGAAGAACCA +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCTAKPV*VGFEEP
Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTCTCACAACCCGTCCCTaGCGGCCAGTCATCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALTTRP*RPVISA
Trigger: TGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAG...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGTCCGAACTGTTGAATaGCTCTATCAGCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLVRTVE*LYQRSK
Trigger: CTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGAC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGAACACCCTCAACTTTaGTCCAGACACTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHEHPQL*SRHSAL
Trigger: CAGTGCTGAGTGTCTGGACAAAAGTTGAGGGTGTTC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATC +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSFQPG*SVLTHI
Trigger: GATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTTTGTGAGGTCCATTTaGAGAGGGCTTTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHFVRSI*RGLSEA
Trigger: GGCCTCTGAAAGCCCTCTCAAAATGGACCTCACAAA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCAGGAACCTTCATGGTaGGGGAAAAACTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHQEPSW*GKNSSS
Trigger: AGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCTG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCTCAGAAATGGATGTTTaGTACCAAACATCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSSEMDV*YQTSGG
Trigger: TCCTCCTGATGTTTGGTACAAAACATCCATTTCTGA...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLSLSW*ALKNQQ
Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACTGCTAAGCCTGTCTaGGTTGGCTTTGAAGAACCA +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTAKPV*VGFEEP
Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAATCAGATCTGCAGCTaGCTGAAACCGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQNQICS*LKPLSG
Trigger: GCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACTCACAACCCGTCCCTaGCGGCCAGTCATCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRLTTRP*RPVISA
Trigger: TGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AACTCTCTGGGTGCTGCACACACCATGACCAGCCTGGGCATGCAGCACCCCAGCACTCCTGTGTTAATCTaGTTTCAGCATGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: NSLGAAHTMTSLGMQHPSTPVLI*FQHASK
Trigger: TTTGGAAGCATGCTGAAACAAGATTAACACAGGAGT...GCTGGGGTGCTGCATGCCCAGGCTGGTCATGGTGTGTGCAGCACCCAGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCCTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCLPLDC*SRKGSR
Trigger: TCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp ACCCCACATGGACTTCTTCATTCGTTGCTCAGCATCAATCAGATCTaGAGCTTGCTGAAACCGCTCTCTGGCGATGACCCACAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: TPHGLLHSLLSINQI*SLLKPLSGDDPQLD
Trigger: GTCAAGCTGTGGGTCATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGAATGAAGAAGTCCATGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTACAGTCTCTGGTTCTaGTTTAACAGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHYSLWF*FNRNCC
Trigger: GCAGCAGTTCCTGTTAAACAAGAACCAGAGACTGTA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCCAGTAAAGCTCAGTaGTCGAGCAATGTACATTCC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSSKAQ*SSNVHS
Trigger: GGAATGTACATTGCTCGACAACTGAGCTTTACTGGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGCGATGACCCACAGCTaGACAGCTTTGTTATACATT +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHAMTHS*TALLYI
Trigger: AATGTATAACAAAGCTGTCAAGCTGTGGGTCATCGC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGCGAACTGTTGTTACTaGGAGCTGTCAAATCGATTC +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLANCCY*ELSNRF
Trigger: GAATCGATTTGACAGCTCCAAGTAACAACAGTTCGC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTCACAACCCGTCCCTaGCGGCCAGTCATCTCAGCA +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLTTRP*RPVISA
Trigger: TGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGGGGTCTGCAGGGTTaGAAGCAATACCCAGGTATA +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCRGLQG*KQYPGI
Trigger: TATACCTGGGTATTGCTTCAAACCCTGCAGACCCCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGAGGCTCCAGAGCAGTaGCTTGGCTCTCTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAEAPEQ*LGSLLE
Trigger: CTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCAATGGGAATCTGCTaGTCTCACCCTCCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAAMGIC*SHPPAE
Trigger: CTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATCTCAACACCATCATTTaGATGAACCATCCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHLNTII*MNHPGL
Trigger: AAGACCCGGATGGTTCATCAAAATGATGGTGTTGAG...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATAGAAAAGTATCCTTaGCTCAGAGGAGGTAGAACC +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCIEKYP*LRGGRT
Trigger: GGTTCTACCTCCTCTGAGCAAAGGATACTTTTCTAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCTTCTTTACTGTACCATaGCTTACATCAGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCFFTVP*LTSVAA
Trigger: AGCAGCTACTGATGTAAGCAATGGTACAGTAAAGAA...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATGACTGCAACACACCTTaGGCAGTTGAAACAAAATCA +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHDCNTP*AVETKS
Trigger: TGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGTC...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGACTGCAACACACCTTaGGCAGTTGAAACAAAATCA +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLDCNTP*AVETKS
Trigger: TGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGTC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCATGAACTCTTCGCCTTaGATTTTTAGCTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCMNSSP*IFSSPI
Trigger: GATAGGAGAGCTAAAAATCAAAGGCGAAGAGTTCAT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGTACGTCCGAACTGTaGAATTGCTCTATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSTSEL*NCSISA
Trigger: AGCGCTGATAGAGCAATTCAACAGTTCGGACGTACT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GACTGCACCTCCACCACTGGAGTGGGGGACACTTCCATTGCTGATGGAAGCTGCAATAGATGCAAATCTTaGTTCTCCTGCCAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: DCTSTTGVGDTSIADGSCNRCKS*FSCQFR
Trigger: TCTGAACTGGCAGGAGAACAAAGATTTGCATCTATT...GCAGCTTCCATCAGCAATGGAAGTGTCCCCCACTCCAGTGGTGGAGGTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCGAGACTGGTCTGAAGTaGATAGGAGATTTACAAGAG +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLETGLK*IGDLQE
Trigger: CTCTTGTAAATCTCCTATCAACTTCAGACCAGTCTC...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCAGATCCATCCATGTaGAAACCTGTCTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSDPSM*KPVCSS
Trigger: TGAAGAACAGACAGGTTTCAACATGGATGGATCTGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCTGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATGGGGGACACTTCCATaGCTGATGGAAGCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRWGTLP*LMEAAY
Trigger: GTAGGCAGCTTCCATCAGCAATGGAAGTGTCCCCCA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTTTCCAACCAAATCTTaGTGCTCAGAGCCATATTGC +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHFPTKS*CSEPYC
Trigger: GCAATATGGCTCTGAGCACAAAGATTTGGTTGGAAA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAAAATGCTAGCGAGCTaGAGTTGCAGGTATTTAGGT +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHKMLAS*SCRYLG
Trigger: ACCTAAATACCTGCAACTCAAGCTCGCTAGCATTTT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCTGTTACGCTTCACGGTaGATCGTTTTTACTTGCAAG +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLCYASR*IVFTCK
Trigger: CTTGCAAGTAAAAACGATCAACCGTGAAGCGTAACA...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 90 bp CTTCCGTTCTTAGCCGCACGATCTGCATCTTCACGTTTGTGCCACTaGCAGATGCTAGAACACCCTCAACTTTTGTCCAGACACTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPFLAARSASSRLCH*QMLEHPQLLSRHSA
Trigger: TGCTGAGTGTCTGGACAAAAGTTGAGGGTGTTCTAGCATCTGTCAGTGGCACAAACGTGAAGATGCAGATCGTGCGGCTAAGAACGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp AAACCTACAATCCGTTGCCCATCTTCCGTTCTTAGCCGCACGATCTaGATCTTCACGTTTGTGCCACTGACAGATGCTAGAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: KPTIRCPSSVLSRTI*IFTFVPLTDARTPS
Trigger: TGAGGGTGTTCTAGCATCTGTCAGTGGCACAAACGTGAAGATGCAGATCGTGCGGCTAAGAACGGAAGATGGGCAACGGATTGTAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGGCATTTCGTACTGTaGGTGCTGAGACTGACGGGC +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELWHFVL*VLRLTG
Trigger: GCCCGTCAGTCTCAGCACCAACAGTACGAAATGCCA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATTCAGAAATGGATGTTTaGTACCAAACATCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHSEMDV*YQTSGG
Trigger: TCCTCCTGATGTTTGGTACAAAACATCCATTTCTGA...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAACCTAGTTTTATACTaGCCGCCAGACTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQNLVLY*PPDWLS
Trigger: TGAAAGCCAGTCTGGCGGCAAGTATAAAACTAGGTT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCAGAACTTCCTCAATTTaGAAGGTCACTCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLRTSSI*KVTPVK
Trigger: CTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATCTCTTGGCGAACTGTaGTTACTTGGAGCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSLGEL*LLGAVK
Trigger: TTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAGGCTACTGTTACTGTaGGTGTTACTGTTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQRLLLL*VLLLAG
Trigger: ACCAGCTAACAGTAACACCAACAGTAACAGTAGCCT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CTGCAATGGGAATCTGCTTGTCTCACCCTCCAGCAGAGTCAGCCTAGGAGGCTCATGAACTCTTCGCCTTaGATTTTTAGCTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: LQWESACLTLQQSQPRRLMNSSP*IFSSPI
Trigger: GATAGGAGAGCTAAAAATCAAAGGCGAAGAGTTCAT...GAGCCTCCTAGGCTGACTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATAATAGATGCAAATCTTaGTTCTCCTGCCAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHNRCKS*FSCQFR
Trigger: TCTGAACTGGCAGGAGAACAAAGATTTGCATCTATT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAAGCTCAGCCCAAATCTaGGTAGCTTCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSSAQI*VASSHD
Trigger: GTCATGGGAGGAAGCTACCAAGATTTGGGCTGAGCT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAACGCCCGGCTACGAGTaGGGTTTTAACAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRTPGYE*GFNRRG
Trigger: TCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCGT...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGAGGCTCCAGAGCAGTaGCTTGGCTCTCTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELEAPEQ*LGSLLE
Trigger: CTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGAGGCTCCAGAGCAGTaGCTTGGCTCTCTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTEAPEQ*LGSLLE
Trigger: CTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGCAATGGGAATCTGCTaGTCTCACCCTCCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELAMGIC*SHPPAE
Trigger: CTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGGCTTCTTCTTTTCCTaGCTTAGCCCTGCACTAAGG +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAGFFFS*LSPALR
Trigger: CCTTAGTGCAGGGCTAAGCAAGGAAAAGAAGAAGCC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAAAGAACCCGCCTTTTaGGGCTTCTTCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCKEPAF*GFFFSL
Trigger: CAAGGAAAAGAAGAAGCCCAAAAAGGCGGGTTCTTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 90 bp GACTTCTTCATTCGTTGCTCAGCATCAATCAGATCTGCAGCTTGCTaGAACCGCTCTCTGGCGATGACCCACAGCTTGACAGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: DFFIRCSASIRSAAC*NRSLAMTHSLTALL
Trigger: TAACAAAGCTGTCAAGCTGTGGGTCATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGAATGAAGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCTGAACTTGGTCTTTaGAAGGTGCAGAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSAELGL*KVQRSW
Trigger: CCATGACCTCTGCACCTTCAAAAGACCAAGTTCAGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATACAAGGACTATCTCTaGGCGAACTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQYKDYL*ANCCYL
Trigger: CAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GATGTCCACCTGAAGAAGGGGTGGGTGCAACTCTCTGGGTGCTGCACACACCATACTTTTCGTGCTTTTTaGGCTTCTCGAGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: DVHLKKGWVQLSGCCTHHTFRAF*ASRVIS
Trigger: AGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAGT...ATGGTGTGTGCAGCACCCAGAGAGTTGCACCCACCCCTTCTTCAGGTGGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATCAGATCCATCCATGTaGAAACCTGTCTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSDPSM*KPVCSS
Trigger: TGAAGAACAGACAGGTTTCAACATGGATGGATCTGA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAGCTTTCAGCCAGGTTaGTCAGTTTTAACACACATC +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCSFQPG*SVLTHI
Trigger: GATGTGTGTTAAAACTGACAAACCTGGCTGAAAGCT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACGCCCGGCTACGAGTaGGGTTTTAACAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTPGYE*GFNRRG
Trigger: TCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCTTTCCAACCAAATCTTaGTGCTCAGAGCCATATTGC +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCFPTKS*CSEPYC
Trigger: GCAATATGGCTCTGAGCACAAAGATTTGGTTGGAAA...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCCACGGTGTCTGCCTTaGCCATTGGGAGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMPRCLP*PLGGLN
Trigger: GTTCAGGCCTCCCAATGGCAAAGGCAGACACCGTGG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCTTGCTTGGCTCTCTTTaGGAGGACAATTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCLLGSL*EDNCSL
Trigger: TAAGGAACAATTGTCCTCCAAAAGAGAGCCAAGCAA...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATTGCTTGGCTCTCTTTaGGAGGACAATTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQLLGSL*EDNCSL
Trigger: TAAGGAACAATTGTCCTCCAAAAGAGAGCCAAGCAA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCGCTCACGGCAATCCTaGAAAGTTATAAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCRSRQS*KVIKEH
Trigger: ATGTTCCTTTATAACTTTCAAGGATTGCCGTGAGCG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGAGGCTTCTTCTTTTCCTaGCTTAGCCCTGCACTAAGG +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRGFFFS*LSPALR
Trigger: CCTTAGTGCAGGGCTAAGCAAGGAAAAGAAGAAGCC...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCCTGGCCAAAGTTTTATaGCAGAGATACAGTGTACCT +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCLAKVL*QRYSVP
Trigger: AGGTACACTGTATCTCTGCAATAAAACTTTGGCCAG...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCTGTTACGCTTCACGGTaGATCGTTTTTACTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCCYASR*IVFTCK
Trigger: CTTGCAAGTAAAAACGATCAACCGTGAAGCGTAACA...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACAGGAACCTTCATGGTaGGGGAAAAACTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRQEPSW*GKNSSS
Trigger: AGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCTG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAACCTAGTTTTATACTaGCCGCCAGACTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKANLVLY*PPDWLS
Trigger: TGAAAGCCAGTCTGGCGGCAAGTATAAAACTAGGTT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCKQLWL*AICSEA
Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTGCGAACTGTTGTTACTaGGAGCTGTCAAATCGATTC +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKAANCCY*ELSNRF
Trigger: GAATCGATTTGACAGCTCCAAGTAACAACAGTTCGC...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTCTCTTGGCGAACTGTaGTTACTTGGAGCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKASLGEL*LLGAVK
Trigger: TTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAAATAGATGCAAATCTTaGTTCTCCTGCCAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQNRCKS*FSCQFR
Trigger: TCTGAACTGGCAGGAGAACAAAGATTTGCATCTATT...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCTACGTGGCCAGAGGTaGAATATCCTGGAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTLRGQR*NILESE
Trigger: TTCTGACTCCAGGATATTCAACCTCTGGCCACGTAG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGCTGCTTCCCAGTATTaGGTCGATAAACTAAGAAAA +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQAASQY*VDKLRK
Trigger: TTTTCTTAGTTTATCGACCAAATACTGGGAAGCAGC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCGCTGCTTCCCAGTATTaGGTCGATAAACTAAGAAAA +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCAASQY*VDKLRK
Trigger: TTTTCTTAGTTTATCGACCAAATACTGGGAAGCAGC...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGAACACCCTCAACTTTaGTCCAGACACTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELEHPQL*SRHSAL
Trigger: CAGTGCTGAGTGTCTGGACAAAAGTTGAGGGTGTTC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCACTCCTGTGTTAATCTaGTTTCAGCATGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCTPVLI*FQHASK
Trigger: TTTGGAAGCATGCTGAAACAAGATTAACACAGGAGT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTA +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDHRPWG*SLSCML
Trigger: TAGCATGCAGCTAAGTGACAACCCCCATGGCCTATG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAAGTGCTCAGAGCCATATaGCTAAAAAGAAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQVLRAI*LKRKRH
Trigger: ATGCCTTTTTCTTTTTAGCAATATGGCTCTGAGCAC...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSMGTFL*TACQEK
Trigger: CTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCAT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCGCTAGCGAGCTTGAGTaGCAGGTATTTAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSASELE*QVFRCV
Trigger: AACACACCTAAATACCTGCAACTCAAGCTCGCTAGC...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTCCAGAGCAGTTGCTaGGCTCTCTTTTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLQSSC*ALFWRT
Trigger: TGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp CATCAAGTTCAGATCTTGACTCATAAGATATGCTTCCATCATCATTaGTCACAACCCGTCCCTTGCGGCCAGTCATCTCAGCAACGTTCT +
Preference number: 5 (lower is better)
Translates to: HQVQILTHKICFHHH*SQPVPCGQSSQQRS
Trigger: AGAACGTTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATATCTTATGAGTCAAGATCTGAACTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp GTATTTCCACAGGCACATCAAGTTCAGATCTTGACTCATAAGATATaGTTCCATCATCATTGCTCACAACCCGTCCCTTGCGGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: VFPQAHQVQILTHKI*FHHHCSQPVPCGQS
Trigger: TGACTGGCCGCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATATCTTATGAGTCAAGATCTGAACTTGATGTGCCTGTGGAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CCA 90 bp CGTACTGTTGGTGCTGAGACTGACGGGCGTGTGCTTGCAGTAGTCTaGATAAACTTAGTTAAAGTGATGGTTTGCCTGTTGGTTGTTACA +
Preference number: 5 (lower is better)
Translates to: RTVGAETDGRVLAVV*INLVKVMVCLLVVT
Trigger: TGTAACAACCAACAGGCAAACCATCACTTTAACTAAGTTTATCCAGACTACTGCAAGCACACGCCCGTCAGTCTCAGCACCAACAGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGTGATGGTTTGCCTGTaGGTTGTTACAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELVMVCL*VVTGGV
Trigger: AACACCACCTGTAACAACCAACAGGCAAACCATCAC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCACTGCTAAGCCTGTCTaGGTTGGCTTTGAAGAACCA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTTAKPV*VGFEEP
Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGTCAGCCTAGGAGGCTCCAGAGCAGTTGCTTGGCTCTCTTTTGGAGGACAATCTCCGTTCTACTGCTaGAATAAAATCACTGAATTC +
Preference number: 5 (lower is better)
Translates to: RVSLGGSRAVAWLSFGGQSPFYC*NKITEF
Trigger: GAATTCAGTGATTTTATTCAAGCAGTAGAACGGAGA...TTGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAGCCTCCTAGGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCTCTTGGCGAACTGTaGTTACTTGGAGCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSLGEL*LLGAVK
Trigger: TTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAAAAGAGGAGTTGGGCCAACAGCCTGCGAGAGAAGATCCTTCCCAACTCTGCACTTTTCGTGCTTTTTaGGCTTCTCGAGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: RKEELGQQPAREDPSQLCTFRAF*ASRVIS
Trigger: AGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAGT...GCAGAGTTGGGAAGGATCTTCTCTCGCAGGCTGTTGGCCCAACTCCTCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGTCCGAACTGTTGAATaGCTCTATCAGCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDVRTVE*LYQRSK
Trigger: CTTGGAGCGCTGATAGAGCAATTCAACAGTTCGGAC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCTACGTGGCCAGAGGTaGAATATCCTGGAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDLRGQR*NILESE
Trigger: TTCTGACTCCAGGATATTCAACCTCTGGCCACGTAG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTTGTGAGGTCCATTTaGAGAGGGCTTTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDFVRSI*RGLSEA
Trigger: GGCCTCTGAAAGCCCTCTCAAAATGGACCTCACAAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRLPLDC*SRKGSR
Trigger: TCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELMGTFL*TACQEK
Trigger: CTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGCTAGCGAGCTTGAGTaGCAGGTATTTAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTASELE*QVFRCV
Trigger: AACACACCTAAATACCTGCAACTCAAGCTCGCTAGC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTTTGCTTGGCTCTCTTTaGGAGGACAATTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKALLGSL*EDNCSL
Trigger: TAAGGAACAATTGTCCTCCAAAAGAGAGCCAAGCAA...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGCAATGGGAATCTGCTaGTCTCACCCTCCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMAMGIC*SHPPAE
Trigger: CTCTGCTGGAGGGTGAGACAAGCAGATTCCCATTGC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCCTCAACACCATCATTTaGATGAACCATCCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSLNTII*MNHPGL
Trigger: AAGACCCGGATGGTTCATCAAAATGATGGTGTTGAG...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGATCAATTCCGGACGCTaGGTACCGTGCTCCCACGAA +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMINSGR*VPCSHE
Trigger: TTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGAT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATACAGTCTCTGGTTCTaGTTTAACAGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELYSLWF*FNRNCC
Trigger: GCAGCAGTTCCTGTTAAACAAGAACCAGAGACTGTA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCTGAACTTGGTCTTTaGAAGGTGCAGAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLAELGL*KVQRSW
Trigger: CCATGACCTCTGCACCTTCAAAAGACCAAGTTCAGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAACCTAGTTTTATACTaGCCGCCAGACTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTNLVLY*PPDWLS
Trigger: TGAAAGCCAGTCTGGCGGCAAGTATAAAACTAGGTT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATCCAGTAAAGCTCAGTaGTCGAGCAATGTACATTCC +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSSKAQ*SSNVHS
Trigger: GGAATGTACATTGCTCGACAACTGAGCTTTACTGGA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCCAGTAAAGCTCAGTaGTCGAGCAATGTACATTCC +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSSKAQ*SSNVHS
Trigger: GGAATGTACATTGCTCGACAACTGAGCTTTACTGGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AATGATTGGGATAATCAATTCCGGACGCTTGGTACCGTGCTCCCACGAAAGGCTAGAACTTCCTCAATTTaGAAGGTCACTCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: NDWDNQFRTLGTVLPRKARTSSI*KVTPVK
Trigger: CTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT...AGCCTTTCGTGGGAGCACGGTACCAAGCGTCCGGAATTGATTATCCCAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAGGCTACTGTTACTGTaGGTGTTACTGTTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTRLLLL*VLLLAG
Trigger: ACCAGCTAACAGTAACACCAACAGTAACAGTAGCCT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGTACGTCCGAACTGTaGAATTGCTCTATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDSTSEL*NCSISA
Trigger: AGCGCTGATAGAGCAATTCAACAGTTCGGACGTACT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACTACGTGGCCAGAGGTaGAATATCCTGGAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLLRGQR*NILESE
Trigger: TTCTGACTCCAGGATATTCAACCTCTGGCCACGTAG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCATAGGCCATGGGGGTaGTCACTTAGCTGCATGCTA +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTHRPWG*SLSCML
Trigger: TAGCATGCAGCTAAGTGACAACCCCCATGGCCTATG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACGCCCGGCTACGAGTaGGGTTTTAACAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTPGYE*GFNRRG
Trigger: TCCTCTTCTGTTAAAACCCAACTCGTAGCCGGGCGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACATACACACACTACATaGCTTTGGATGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRHTHTT*LWMQVL
Trigger: AAGAACCTGCATCCAAAGCAATGTAGTGTGTGTATG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGTAGCCTTTCTTCTCTaGCCGGCTAACAATTGTTCT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTVAFLL*PANNCS
Trigger: AGAACAATTGTTAGCCGGCAAGAGAAGAAAGGCTAC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCTTCCTCTTGACTGCTaGTCAAGAAAAGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTLPLDC*SRKGSR
Trigger: TCTGGATCCTTTTCTTGACAAGCAGTCAAGAGGAAG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCTCCAGAGCAGTTGCTaGGCTCTCTTTTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMLQSSC*ALFWRT
Trigger: TGTCCTCCAAAAGAGAGCCAAGCAACTGCTCTGGAG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTACTCAACACCATCATTTaGATGAACCATCCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELLNTII*MNHPGL
Trigger: AAGACCCGGATGGTTCATCAAAATGATGGTGTTGAG...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCATAGAAAAGTATCCTTaGCTCAGAGGAGGTAGAACC +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSIEKYP*LRGGRT
Trigger: GGTTCTACCTCCTCTGAGCAAAGGATACTTTTCTAT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTAGCAATGCAGTATCATaGGAACAGGGCGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTSNAVS*EQGAPF
Trigger: GAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAGCAATGCAGTATCATaGGAACAGGGCGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMSNAVS*EQGAPF
Trigger: GAAGGGTGCGCCCTGTTCCAATGATACTGCATTGCT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp CACTCATCAAACACTATCACTCCATCGAAGTCATCACCGCACCAATaGAGAAGTTGTTTTAACCTAGTTTTATACTTGCCGCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: HSSNTITPSKSSPHQ*RSCFNLVLYLPPDW
Trigger: CCAGTCTGGCGGCAAGTATAAAACTAGGTTAAAACAACTTCTGCATTGGTGCGGTGATGACTTCGATGGAGTGATAGTGTTTGATGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGCTGAACTTGGTCTTTaGAAGGTGCAGAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTAELGL*KVQRSW
Trigger: CCATGACCTCTGCACCTTCAAAAGACCAAGTTCAGC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGATCAGAAATGGATGTTTaGTACCAAACATCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRSEMDV*YQTSGG
Trigger: TCCTCCTGATGTTTGGTACAAAACATCCATTTCTGA...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSKQLWL*AICSEA
Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATGCGATGACCCACAGCTaGACAGCTTTGTTATACATT +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDAMTHS*TALLYI
Trigger: AATGTATAACAAAGCTGTCAAGCTGTGGGTCATCGC...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAGGTACATGTGTATGGGGACCTTCCTCTTGACTGCTTGTCAAGAAAAGGATCCACACATTTTCCATTCTaGATTTCCTCTCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: QVHVYGDLPLDCLSRKGSTHFPF*ISSRAS
Trigger: ACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTGT...GGATCCTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCATACACATGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTACAAGGACTATCTCTaGGCGAACTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTYKDYL*ANCCYL
Trigger: CAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATAGGCTACTGTTACTGTaGGTGTTACTGTTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDRLLLL*VLLLAG
Trigger: ACCAGCTAACAGTAACACCAACAGTAACAGTAGCCT...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAGTACGTCCGAACTGTaGAATTGCTCTATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSTSEL*NCSISA
Trigger: AGCGCTGATAGAGCAATTCAACAGTTCGGACGTACT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAGAGACTGGTCTGAAGTaGATAGGAGATTTACAAGAG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELETGLK*IGDLQE
Trigger: CTCTTGTAAATCTCCTATCAACTTCAGACCAGTCTC...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGAGGGGTCTGCAGGGTTaGAAGCAATACCCAGGTATA +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMRGLQG*KQYPGI
Trigger: TATACCTGGGTATTGCTTCAAACCCTGCAGACCCCT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTTTGTGAGGTCCATTTaGAGAGGGCTTTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTFVRSI*RGLSEA
Trigger: GGCCTCTGAAAGCCCTCTCAAAATGGACCTCACAAA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCTAGCGAGCTTGAGTaGCAGGTATTTAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLASELE*QVFRCV
Trigger: AACACACCTAAATACCTGCAACTCAAGCTCGCTAGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAAAATGCTAGCGAGCTaGAGTTGCAGGTATTTAGGT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTKMLAS*SCRYLG
Trigger: ACCTAAATACCTGCAACTCAAGCTCGCTAGCATTTT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCCTGGCCAAAGTTTTATaGCAGAGATACAGTGTACCT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTLAKVL*QRYSVP
Trigger: AGGTACACTGTATCTCTGCAATAAAACTTTGGCCAG...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGGATCCCATCAGATGTaGTCTCCAGATGCACCATGT +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTGSHQM*SPDAPC
Trigger: ACATGGTGCATCTGGAGACAACATCTGATGGGATCC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTGATGGTTTGCCTGTaGGTTGTTACAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVMVCL*VVTGGV
Trigger: AACACCACCTGTAACAACCAACAGGCAAACCATCAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCAGGAACCTTCATGGTaGGGGAAAAACTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTQEPSW*GKNSSS
Trigger: AGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCTG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCTAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMLSLSW*ALKNQQ
Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTKQLWL*AICSEA
Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAAGAACTTCCTCAATTTaGAAGGTCACTCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELRTSSI*KVTPVK
Trigger: CTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAGCGATGACCCACAGCTaGACAGCTTTGTTATACATT +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLAMTHS*TALLYI
Trigger: AATGTATAACAAAGCTGTCAAGCTGTGGGTCATCGC...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAACACATTTTCCATTCTaGATTTCCTCTCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELTHFPF*ISSRAS
Trigger: ACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTGT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp AGAGACCTTGTGGTATGGAGGTTGCTAAATGAGGGGAACACTAATTCCCCCAGACATCAAGTTCAGATCTaGACTCATAAGATATGCTTC +
Preference number: 5 (lower is better)
Translates to: RDLVVWRLLNEGNTNSPRHQVQI*THKICF
Trigger: GAAGCATATCTTATGAGTCAAGATCTGAACTTGATG...TCTGGGGGAATTAGTGTTCCCCTCATTTAGCAACCTCCATACCACAAGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGCTGCTTCCCAGTATTaGGTCGATAAACTAAGAAAA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTAASQY*VDKLRK
Trigger: TTTTCTTAGTTTATCGACCAAATACTGGGAAGCAGC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCGTGCTCAGAGCCATATaGCTAAAAAGAAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTVLRAI*LKRKRH
Trigger: ATGCCTTTTTCTTTTTAGCAATATGGCTCTGAGCAC...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATGGGGACCTTCCTCTaGACTGCTTGTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTMGTFL*TACQEK
Trigger: CTTTTCTTGACAAGCAGTCAAGAGGAAGGTCCCCAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAAAAGAACCCGCCTTTTaGGGCTTCTTCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLKEPAF*GFFFSL
Trigger: CAAGGAAAAGAAGAAGCCCAAAAAGGCGGGTTCTTT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTGTTTCAAGTTGTCTTaGGATCCCATCAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTCFKLS*DPIRCC
Trigger: ACAACATCTGATGGGATCCAAAGACAACTTGAAACA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATGTTTCAAGTTGTCTTaGGATCCCATCAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELCFKLS*DPIRCC
Trigger: ACAACATCTGATGGGATCCAAAGACAACTTGAAACA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATCACCTTTGTTTCAAGTaGTCTTTGGATCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDHLCFK*SLDPIR
Trigger: TCTGATGGGATCCAAAGACAACTTGAAACAAAGGTG...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTGTTACGCTTCACGGTaGATCGTTTTTACTTGCAAG +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDCYASR*IVFTCK
Trigger: CTTGCAAGTAAAAACGATCAACCGTGAAGCGTAACA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp AGGAAAGTTTCATGTTGCTGGGCTGCATATGTAATTGCCTCAAGCTaGAATGCTGATAACCAGCCATTATCAATGGTTTCCTCAGAAATG +
Preference number: 5 (lower is better)
Translates to: RKVSCCWAAYVIASS*NADNQPLSMVSSEM
Trigger: CATTTCTGAGGAAACCATTGATAATGGCTGGTTATCAGCATTGCAGCTTGAGGCAATTACATATGCAGCCCAGCAACATGAAACTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp TCAAGTTGTCTTTGGATCCCATCAGATGTTGTCTCCAGATGCACCATGTCAGATTTCTTTACTGTACCATaGCTTACATCAGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSCLWIPSDVVSRCTMSDFFTVP*LTSVAA
Trigger: AGCAGCTACTGATGTAAGCAATGGTACAGTAAAGAA...ATCTGACATGGTGCATCTGGAGACAACATCTGATGGGATCCAAAGACAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGGACTTCTTCATTCGTaGCTCAGCATCAATCAGATC +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTGLLHS*LSINQI
Trigger: GATCTGATTGATGCTGAGCAACGAATGAAGAAGTCC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGCGAACTGTTGTTACTaGGAGCTGTCAAATCGATTC +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMANCCY*ELSNRF
Trigger: GAATCGATTTGACAGCTCCAAGTAACAACAGTTCGC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCTCATCTAAAAATGGGTaGAAATCGTCATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTSSKNG*KSSSSP
Trigger: TGGAGATGATGACGATTTCAACCCATTTTTAGATGA...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATCATCTAAAAATGGGTaGAAATCGTCATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELSSKNG*KSSSSP
Trigger: TGGAGATGATGACGATTTCAACCCATTTTTAGATGA...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATCAGATCCATCCATGTaGAAACCTGTCTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSDPSM*KPVCSS
Trigger: TGAAGAACAGACAGGTTTCAACATGGATGGATCTGA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTATGTATTCATTACCTaGACCAGAAACCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMYVFIT*TRNPGQ
Trigger: CTGCCCTGGGTTTCTGGTCAAGGTAATGAATACATA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTAGCCTTTCTTCTCTaGCCGGCTAACAATTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVAFLL*PANNCS
Trigger: AGAACAATTGTTAGCCGGCAAGAGAAGAAAGGCTAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGTAGCCTTTCTTCTCTaGCCGGCTAACAATTGTTCT +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTVAFLL*PANNCS
Trigger: AGAACAATTGTTAGCCGGCAAGAGAAGAAAGGCTAC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CAAACTAACTCGCTGATTTTTGCAAGACCACAGTGTAAAGGTCGGATGTCCACCATTAGAGGGTGGGTTTaGGATTTTATCTCAAGTACT +
Preference number: 5 (lower is better)
Translates to: QTNSLIFARPQCKGRMSTIRGWV*DFISST
Trigger: AGTACTTGAGATAAAATCCAAAACCCACCCTCTAAT...GGTGGACATCCGACCTTTACACTGTGGTCTTGCAAAAATCAGCGAGTTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GGTGCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTAATTAGAGGGTGGGTTTaGGATTTTATCTCAAGTACT +
Preference number: 5 (lower is better)
Translates to: GAQHHHFDEPSGSSQLELIRGWV*DFISST
Trigger: AGTACTTGAGATAAAATCCAAAACCCACCCTCTAAT...TAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTACGCTCACGGCAATCCTaGAAAGTTATAAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLRSRQS*KVIKEH
Trigger: ATGTTCCTTTATAACTTTCAAGGATTGCCGTGAGCG...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTAATAGAAAAGTATCCTTaGCTCAGAGGAGGTAGAACC +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLIEKYP*LRGGRT
Trigger: GGTTCTACCTCCTCTGAGCAAAGGATACTTTTCTAT...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp ATACTTATTATCAAAGTTGAACCTGCTCAGATCTCTAGATTCTGTTaGCCTTCTATCACCATGTGTAAGTGCCCCCAAACTCTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: ILIIKVEPAQISRFC*PSITMCKCPQTLKS
Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGATAGAAGGGCAACAGAATCTAGAGATCTGAGCAGGTTCAACTTTGATAATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CCA 90 bp TTCCTCTGGTTCATCATCTTCTTTTACAACAGGAACCTTCATGGTTaGGGAAAAACTCCTCATCTTCATGTCGTTTATCCACATTCTAGC +
Preference number: 5 (lower is better)
Translates to: FLWFIIFFYNRNLHG*GKTPHLHVVYPHSS
Trigger: GCTAGAATGTGGATAAACGACATGAAGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCTGTTGTAAAAGAAGATGATGAACCAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CCA 90 bp AGCCTGTCTTGGTTGGCTTTGAAGAACCAACAGGACATAAGTTTTTaGCTTTATGACACTCATCAAACACTATCACTCCATCGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: SLSWLALKNQQDISF*LYDTHQTLSLHRSH
Trigger: ATGACTTCGATGGAGTGATAGTGTTTGATGAGTGTCATAAAGCCAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTGACTGCAACACACCTTaGGCAGTTGAAACAAAATCA +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTDCNTP*AVETKS
Trigger: TGATTTTGTTTCAACTGCCAAAGGTGTGTTGCAGTC...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTACAAGGACTATCTCTaGGCGAACTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMYKDYL*ANCCYL
Trigger: CAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCATACACACACTACATaGCTTTGGATGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMHTHTT*LWMQVL
Trigger: AAGAACCTGCATCCAAAGCAATGTAGTGTGTGTATG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTCGCTCACGGCAATCCTaGAAAGTTATAAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTRSRQS*KVIKEH
Trigger: ATGTTCCTTTATAACTTTCAAGGATTGCCGTGAGCG...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGACACATTTTCCATTCTaGATTTCCTCTCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMTHFPF*ISSRAS
Trigger: ACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTGT...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp GCTCAACACCATCATTTTGATGAACCATCCGGGTCTTCCCAACTCGAATTATTATCATCTAAAAATGGGTaGAAATCGTCATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: AQHHHFDEPSGSSQLELLSSKNG*KSSSSP
Trigger: TGGAGATGATGACGATTTCAACCCATTTTTAGATGA...TAATAATTCGAGTTGGGAAGACCCGGATGGTTCATCAAAATGATGGTGTTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTATGAACTCTTCGCCTTaGATTTTTAGCTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTMNSSP*IFSSPI
Trigger: GATAGGAGAGCTAAAAATCAAAGGCGAAGAGTTCAT...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGGTGCTCAGAGCCATATaGCTAAAAAGAAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMVLRAI*LKRKRH
Trigger: ATGCCTTTTTCTTTTTAGCAATATGGCTCTGAGCAC...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTGTTTCAAGTTGTCTTaGGATCCCATCAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTCFKLS*DPIRCC
Trigger: ACAACATCTGATGGGATCCAAAGACAACTTGAAACA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp CGTGTGCTTGCAGTAGTCTGGATAAACTTAGTTAAAGTGATGGTTTaGCTGTTGGTTGTTACAGGTGGTGTTTTAGTCATTACAATTGTA +
Preference number: 5 (lower is better)
Translates to: RVLAVVWINLVKVMV*LLVVTGGVLVITIV
Trigger: TACAATTGTAATGACTAAAACACCACCTGTAACAACCAACAGGCAAACCATCACTTTAACTAAGTTTATCCAGACTACTGCAAGCACACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 90 bp ACTCTCAAGTCTTTTAGCAACAATAGATGCAAATCTTTGTTCTCCTaGCAGTTCAGATATCAGAAAGACATACTCAGGAGCAGTAACTTG +
Preference number: 5 (lower is better)
Translates to: TLKSFSNNRCKSLFS*QFRYQKDILRSSNL
Trigger: CAAGTTACTGCTCCTGAGTATGTCTTTCTGATATCTGAACTGGCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAAAGACTTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CCATCAGCACTGCTGATTTTCAGTTTTGCTATCTATTCCAGGTTTGTCCTTACTTCTCCGTTCTACTGCTaGAATAAAATCACTGAATTC +
Preference number: 5 (lower is better)
Translates to: PSALLIFSFAIYSRFVLTSPFYC*NKITEF
Trigger: GAATTCAGTGATTTTATTCAAGCAGTAGAACGGAGA...AGTAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGTCTCCGTTCTACTGCTaGAATAAAATCACTGAATTC +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMSPFYC*NKITEF
Trigger: GAATTCAGTGATTTTATTCAAGCAGTAGAACGGAGA...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS-3UTR CAA 90 bp CGAAGTAAAAGCAGATGGGAATTATCAGGGGAGAAGCTAAAGGAAAGACATATGCATCAAGTTCAGATCTaGACTCATAAGATATGCTTC +
Preference number: 5 (lower is better)
Translates to: RSKSRWELSGEKLKERHMHQVQI*THKICF
Trigger: GAAGCATATCTTATGAGTCAAGATCTGAACTTGATG...CATATGTCTTTCCTTTAGCTTCTCCCCTGATAATTCCCATCTGCTTTTACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp CCGGCGCCAGCACAGCTCCTCCCGGGAGGTGTGAGTTaGAAGGACCAGAGGCGACTGGAGCGGAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PAPAQLLPGGVS*KDQRRLERRRR
Trigger: CCGCCGCCTCCGCTCCAGTCGCCTCTGGTCCTTCAAACTCACACCTCCCGGGAGGAGCTGTGCTGGCGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS GCA 72 bp ATTCCACTCTCACTCAAAGCAGCAAGCAGTAAATCTTaGCCTGGCTCCACCATTTTCCCCGCGGGACCCGGC +
Preference number: 6 (lower is better)
Translates to: IPLSLKAASSKS*PGSTIFPAGPG
Trigger: GCCGGGTCCCGCGGGGAAAATGGTGGAGCCAGGGCAAGATTTACTGCTTGCTGCTTTGAGTGAGAGTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267176.8
ENST00000602398.3
CDS GCA 72 bp ATATGCTTCCATCATCATTGCTCACAACCCGTCCCTTaGGGCCAGTCATCTCAGCAACGTTCTCAGGGCCAC +
Preference number: 6 (lower is better)
Translates to: ICFHHHCSQPVP*GQSSQQRSQGH
Trigger: GTGGCCCTGAGAACGTTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp GATATGCTTCCATCATCATTGCTCACAACCCGTCCCTaGCGGCCAGTCATCTCAGCAACGTTCTCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: DMLPSSLLTTRP*RPVISATFSGP
Trigger: TGGCCCTGAGAACGTTGCTGAGATGACTGGCCGCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp AAGCCATCGTCTGGTCCTGTCAGCTCAGCCCAAATCTaGGTAGCTTCCTCCCATGACATTCCCCTCTCTACA +
Preference number: 6 (lower is better)
Translates to: KPSSGPVSSAQI*VASSHDIPLST
Trigger: TGTAGAGAGGGGAATGTCATGGGAGGAAGCTACCAAGATTTGGGCTGAGCTGACAGGACCAGACGATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp ATCCGTTGCCCATCTTCCGTTCTTAGCCGCACGATCTaGATCTTCACGTTTGTGCCACTGACAGATGCTAGA +
Preference number: 6 (lower is better)
Translates to: IRCPSSVLSRTI*IFTFVPLTDAR
Trigger: TCTAGCATCTGTCAGTGGCACAAACGTGAAGATGCAGATCGTGCGGCTAAGAACGGAAGATGGGCAACGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp CTTCATTCGTTGCTCAGCATCAATCAGATCTGCAGCTaGCTGAAACCGCTCTCTGGCGATGACCCACAGCTT +
Preference number: 6 (lower is better)
Translates to: LHSLLSINQICS*LKPLSGDDPQL
Trigger: AAGCTGTGGGTCATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp CATGGACTTCTTCATTCGTTGCTCAGCATCAATCAGATCTGCAGCTaGCTGAAACCGCTCTCTGGCGATGACCCACAGCTTGACAGCTTT +
Preference number: 6 (lower is better)
Translates to: HGLLHSLLSINQICS*LKPLSGDDPQLDSF
Trigger: AAAGCTGTCAAGCTGTGGGTCATCGCCAGAGAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGAATGAAGAAGTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 72 bp TTAGCCGCACGATCTGCATCTTCACGTTTGTGCCACTaGCAGATGCTAGAACACCCTCAACTTTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: LAARSASSRLCH*QMLEHPQLLSR
Trigger: TCTGGACAAAAGTTGAGGGTGTTCTAGCATCTGTCAGTGGCACAAACGTGAAGATGCAGATCGTGCGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 72 bp GAAACCTGTCTGTTCTTCATGCGTTGCTCAAGTTGGTaGTGCTCTGAGGGTGATGCTGTTGCCATAGCTGTT +
Preference number: 6 (lower is better)
Translates to: ETCLFFMRCSSW*CSEGDAVAIAV
Trigger: AACAGCTATGGCAACAGCATCACCCTCAGAGCATCACCAACTTGAGCAACGCATGAAGAACAGACAGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp CAGATCTTGACTCATAAGATATGCTTCCATCATCATTaGTCACAACCCGTCCCTTGCGGCCAGTCATCTCAG +
Preference number: 6 (lower is better)
Translates to: QILTHKICFHHH*SQPVPCGQSSQ
Trigger: CTGAGATGACTGGCCGCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATATCTTATGAGTCAAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp AGACCAGAACTGACCCCACATGGACTTCTTCATTCGTaGCTCAGCATCAATCAGATCTGCAGCTTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: RPELTPHGLLHS*LSINQICSLLK
Trigger: TTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGAATGAAGAAGTCCATGTGGGGTCAGTTCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp CAGGCACATCAAGTTCAGATCTTGACTCATAAGATATaGTTCCATCATCATTGCTCACAACCCGTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: QAHQVQILTHKI*FHHHCSQPVPC
Trigger: GCAAGGGACGGGTTGTGAGCAATGATGATGGAAGCATATCTTATGAGTCAAGATCTGAACTTGATGTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp CTGCTACCAGTAAGGCCACCTACTTTTCGTGCTTTTTaGGCTTCTCGAGTTATTTCTTCACCTTTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: LLPVRPPTFRAF*ASRVISSPFRF
Trigger: GAAGCGGAAAGGTGAAGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAGTAGGTGGCCTTACTGGTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 72 bp CCATTGCTTACATCAGTAGCTGCTGTTGCTACTGGCTaGGCAATATTAGCAGGTGGCTTTAGTTTCATCAGT +
Preference number: 6 (lower is better)
Translates to: PLLTSVAAVATG*AILAGGFSFIS
Trigger: ACTGATGAAACTAAAGCCACCTGCTAATATTGCTCAGCCAGTAGCAACAGCAGCTACTGATGTAAGCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS TCA 72 bp TGTTGCCATAGCTGTTTCTGTTGGACCGCAAGCTGTTaGGACTGGTCTGAAGTTGATAGGAGATTTACAAGA +
Preference number: 6 (lower is better)
Translates to: CCHSCFCWTASC*DWSEVDRRFTR
Trigger: TCTTGTAAATCTCCTATCAACTTCAGACCAGTCTCAACAGCTTGCGGTCCAACAGAAACAGCTATGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp TCATGTTGCTGGGCTGCATATGTAATTGCCTCAAGCTaGAATGCTGATAACCAGCCATTATCAATGGTTTCC +
Preference number: 6 (lower is better)
Translates to: SCCWAAYVIASS*NADNQPLSMVS
Trigger: GGAAACCATTGATAATGGCTGGTTATCAGCATTGCAGCTTGAGGCAATTACATATGCAGCCCAGCAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp ATCAAAGTTGAACCTGCTCAGATCTCTAGATTCTGTTaGCCTTCTATCACCATGTGTAAGTGCCCCCAAACT +
Preference number: 6 (lower is better)
Translates to: IKVEPAQISRFC*PSITMCKCPQT
Trigger: AGTTTGGGGGCACTTACACATGGTGATAGAAGGGCAACAGAATCTAGAGATCTGAGCAGGTTCAACTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TCTGTTGGACCGCAAGCTGTTGAGACTGGTCTGAAGTaGATAGGAGATTTACAAGAGGAGACACACAATTTG +
Preference number: 6 (lower is better)
Translates to: SVGPQAVETGLK*IGDLQEETHNL
Trigger: CAAATTGTGTGTCTCCTCTTGTAAATCTCCTATCAACTTCAGACCAGTCTCAACAGCTTGCGGTCCAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp AACACTATCACTCCATCGAAGTCATCACCGCACCAATaGAGAAGTTGTTTTAACCTAGTTTTATACTTGCCG +
Preference number: 6 (lower is better)
Translates to: NTITPSKSSPHQ*RSCFNLVLYLP
Trigger: CGGCAAGTATAAAACTAGGTTAAAACAACTTCTGCATTGGTGCGGTGATGACTTCGATGGAGTGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp GCTGATAACCAGCCATTATCAATGGTTTCCTCAGAAATGGATGTTTaGTACCAAACATCAGGAGGAGTAACACTGGATAAAGAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: ADNQPLSMVSSEMDV*YQTSGGVTLDKELV
Trigger: AACCAGCTCTTTATCCAGTGTTACTCCTCCTGATGTTTGGTACAAAACATCCATTTCTGAGGAAACCATTGATAATGGCTGGTTATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp TTGGCAATTTGTTCTGAAGCTCTAAAACTGCTAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAGGACATAAGTTTTTGGCTTTATGAC +
Preference number: 6 (lower is better)
Translates to: LAICSEALKLLSLSW*ALKNQQDISFWLYD
Trigger: GTCATAAAGCCAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGTTTTAGAGCTTCAGAACAAATTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp AAGAAGAACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGTaGTCGAGCAATGTACATTCCTCTAAGCTTCATATCCATAGCAAC +
Preference number: 6 (lower is better)
Translates to: KKNFLNFEGHSSKAQ*SSNVHSSKLHIHSN
Trigger: GTTGCTATGGATATGAAGCTTAGAGGAATGTACATTGCTCGACAACTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp TTTATGCAAATGATATGCTTCAACAGCATTTCAGATCCATCCATGTaGAAACCTGTCTGTTCTTCATGCGTTGCTCAAGTTGGTGATGCT +
Preference number: 6 (lower is better)
Translates to: FMQMICFNSISDPSM*KPVCSSCVAQVGDA
Trigger: AGCATCACCAACTTGAGCAACGCATGAAGAACAGACAGGTTTCAACATGGATGGATCTGAAATGCTGTTGAAGCATATCATTTGCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp TTTAGTCATTACAATTGTAGATCCCAAGGGTGGAAGATGATTTATTaGATTCAGCACAAATGTTGTAGTAGATGGAGGCTGCTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: FSHYNCRSQGWKMIY*IQHKCCSRWRLLPH
Trigger: GTGAGGCAGCAGCCTCCATCTACTACAACATTTGTGCTGAATCAAATAAATCATCTTCCACCCTTGGGATCTACAATTGTAATGACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420886.6
ENST00000602398.3
CDS TCA 72 bp TATCAGAAAGACATACTCAGGAGCAGTAACTTGGTTTaGTCTATGAGTACGTCCGAACTGTTGAATTGCTCT +
Preference number: 6 (lower is better)
Translates to: YQKDILRSSNLV*SMSTSELLNCS
Trigger: AGAGCAATTCAACAGTTCGGACGTACTCATAGATCAAACCAAGTTACTGCTCCTGAGTATGTCTTTCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TATTTCCATGGCACCAACTCCTCTCCGTTCTACTGCTaGAATAAAATCACTGAATTCTCTAAATGGAGTACC +
Preference number: 6 (lower is better)
Translates to: YFHGTNSSPFYC*NKITEFSKWST
Trigger: GGTACTCCATTTAGAGAATTCAGTGATTTTATTCAAGCAGTAGAACGGAGAGGAGTTGGTGCCATGGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGTaGTCGAGCAATGTACATTCCTCTAAGCTTCATATC +
Preference number: 6 (lower is better)
Translates to: FLNFEGHSSKAQ*SSNVHSSKLHI
Trigger: GATATGAAGCTTAGAGGAATGTACATTGCTCGACAACTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp ATGATATGCTTCAACAGCATTTCAGATCCATCCATGTaGAAACCTGTCTGTTCTTCATGCGTTGCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: MICFNSISDPSM*KPVCSSCVAQV
Trigger: AACTTGAGCAACGCATGAAGAACAGACAGGTTTCAACATGGATGGATCTGAAATGCTGTTGAAGCATATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp CTTGCAGTAGTCTGGATAAACTTAGTTAAAGTGATGGTTTGCCTGTaGGTTGTTACAGGTGGTGTTTTAGTCATTACAATTGTAGATCCC +
Preference number: 6 (lower is better)
Translates to: LAVVWINLVKVMVCL*VVTGGVLVITIVDP
Trigger: GGGATCTACAATTGTAATGACTAAAACACCACCTGTAACAACCAACAGGCAAACCATCACTTTAACTAAGTTTATCCAGACTACTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS GCA 72 bp ACACATTTTCCATTCTTGATTTCCTCTCGAGCTAGTTaGACAACCCTTTTAACTTTGGATGCTATGCATAAG +
Preference number: 6 (lower is better)
Translates to: THFPFLISSRAS*TTLLTLDAMHK
Trigger: CTTATGCATAGCATCCAAAGTTAAAAGGGTTGTGCAACTAGCTCGAGAGGAAATCAAGAATGGAAAATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CCA 72 bp TTCATCATCTTCTTTTACAACAGGAACCTTCATGGTTaGGGAAAAACTCCTCATCTTCATGTCGTTTATCCA +
Preference number: 6 (lower is better)
Translates to: FIIFFYNRNLHG*GKTPHLHVVYP
Trigger: TGGATAAACGACATGAAGATGAGGAGTTTTTCCCCAACCATGAAGGTTCCTGTTGTAAAAGAAGATGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CCA 72 bp TGGTTGGCTTTGAAGAACCAACAGGACATAAGTTTTTaGCTTTATGACACTCATCAAACACTATCACTCCAT +
Preference number: 6 (lower is better)
Translates to: WLALKNQQDISF*LYDTHQTLSLH
Trigger: ATGGAGTGATAGTGTTTGATGAGTGTCATAAAGCCAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TACAATTGTAGATCCCAAGGGTGGAAGATGATTTATTaGATTCAGCACAAATGTTGTAGTAGATGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: YNCRSQGWKMIY*IQHKCCSRWRL
Trigger: CAGCCTCCATCTACTACAACATTTGTGCTGAATCAAATAAATCATCTTCCACCCTTGGGATCTACAATTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp CAGCCATTATCAATGGTTTCCTCAGAAATGGATGTTTaGTACCAAACATCAGGAGGAGTAACACTGGATAAA +
Preference number: 6 (lower is better)
Translates to: QPLSMVSSEMDV*YQTSGGVTLDK
Trigger: TTTATCCAGTGTTACTCCTCCTGATGTTTGGTACAAAACATCCATTTCTGAGGAAACCATTGATAATGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 90 bp TTTAGTCATTACAATTGTAGATCCCAAGGGTGGAAGATGATTTATTaGATTCAGCACAAATGTTGTAGTAGATGGAGGCTGCCTCACATT +
Preference number: 6 (lower is better)
Translates to: FSHYNCRSQGWKMIY*IQHKCCSRWRLPHI
Trigger: AATGTGAGGCAGCCTCCATCTACTACAACATTTGTGCTGAATCAAATAAATCATCTTCCACCCTTGGGATCTACAATTGTAATGACTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267176.8
CDS CAA 90 bp CACCTTTCCGCTTCTTTATTTTATTTTCTTTACAAGGACTATCTCTaGGCGAACTGTTGTTACTTGGAGCTGTCAAATCGATTCCTAGTA +
Preference number: 6 (lower is better)
Translates to: HLSASLFYFLYKDYL*ANCCYLELSNRFLV
Trigger: TACTAGGAATCGATTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTAAAGAAAATAAAATAAAGAAGCGGAAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp CTTTACAAGGACTATCTCTTGGCGAACTGTTGTTACTaGGAGCTGTCAAATCGATTCCTAGTAAACTATAAA +
Preference number: 6 (lower is better)
Translates to: LYKDYLLANCCY*ELSNRFLVNYK
Trigger: TTTATAGTTTACTAGGAATCGATTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TGTTTAGTATTTCCACAGGCACATCAAGTTCAGATCTaGACTCATAAGATATGCTTCCATCATCATTGCTCA +
Preference number: 6 (lower is better)
Translates to: CLVFPQAHQVQI*THKICFHHHCS
Trigger: TGAGCAATGATGATGGAAGCATATCTTATGAGTCAAGATCTGAACTTGATGTGCCTGTGGAAATACTAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp TTATTTTCTTTACAAGGACTATCTCTTGGCGAACTGTaGTTACTTGGAGCTGTCAAATCGATTCCTAGTAAA +
Preference number: 6 (lower is better)
Translates to: LFSLQGLSLGEL*LLGAVKSIPSK
Trigger: TTTACTAGGAATCGATTTGACAGCTCCAAGTAACAACAGTTCGCCAAGAGATAGTCCTTGTAAAGAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3
CDS CAA 72 bp ACTCTCAAGTCTTTTAGCAACAATAGATGCAAATCTTaGTTCTCCTGCCAGTTCAGATATCAGAAAGACATA +
Preference number: 6 (lower is better)
Translates to: TLKSFSNNRCKS*FSCQFRYQKDI
Trigger: TATGTCTTTCTGATATCTGAACTGGCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAAAGACTTGAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267176.8
ENST00000420886.6
ENST00000602398.3