Pregenerated sensors for SBK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000187550Ensembl transcript IDs: ENST00000344158.4, ENST00000413299.6
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCTGGGGAAGGTGGCGGCAGGTATGGAGGGACATGCAGAGGTCTaGGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: TLGKVAAGMEGHAEV*GPHGPREECSLQRG Trigger: TCCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTCCCTCCATACCTGCCGCCACCTTCCCCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR TCA 90 bp | AATTTATTTAACAGACATTTCCTGATCCCTGCTGCAGGCCATCGCTaGGTACATGGGGTCTGTCAGCAGACGGAAGGCGGCAAAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: NLFNRHFLIPAAGHR*VHGVCQQTEGGKDP Trigger: GGGGTCTTTGCCGCCTTCCGTCTGCTGACAGACCCCATGTACTCAGCGATGGCCTGCAGCAGGGATCAGGAAATGTCTGTTAAATAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATGACACCAAAAGCCGTTaGCCTTGGGGGCCTCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LQRGERRRTPRGIPSPMDDTKSR*PWGPRV Trigger: CACCCGAGGCCCCCAAGGCCAACGGCTTTTGGTGTC...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACAGCCACGCGGAGGTCTaGGACCCTGGGGAAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SARWSLFAEWLGREKAKHSHAEV*DPGEGG Trigger: GCCACCTTCCCCAGGGTCTCAGACCTCCGCGTGGCT...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR-3UTR CCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAATCCCAAGCCCCATaGATGAAAACACACCGAGGA | + |
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Preference number: 2 (lower is better) Translates to: DMQRSEALMDQGRNAACRESQAP*MKTHRG Trigger: TCCTCGGTGTGTTTTCATCCATGGGGCTTGGGATTC...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR-3UTR CAA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACAGACACCAAAAGCCGTaGGCCTTGGGGGCCTCGGGT | + |
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Preference number: 3 (lower is better) Translates to: SARWSLFAEWLGREKAKHRHQKP*ALGASG Trigger: ACCCGAGGCCCCCAAGGCCAACGGCTTTTGGTGTCT...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR TCA 72 bp | AACAGACATTTCCTGATCCCTGCTGCAGGCCATCGCTaGGTACATGGGGTCTGTCAGCAGACGGAAGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: NRHFLIPAAGHR*VHGVCQQTEGG Trigger: GCCGCCTTCCGTCTGCTGACAGACCCCATGTACTCAGCGATGGCCTGCAGCAGGGATCAGGAAATGTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| 3UTR CCA 72 bp | TTAGAAGAGGATACACGTCCTAGAGCAACAGCAGAGTaGGGGGATGAGGAGGCAGACAGTAAGCATTTACAA | + |
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Preference number: 3 (lower is better) Translates to: LEEDTRPRATAE*GDEEADSKHLQ Trigger: TTGTAAATGCTTACTGTCTGCCTCCTCATCCCCCCACTCTGCTGTTGCTCTAGGACGTGTATCCTCTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCGTCCAGGGCGGGCTaGATGGGCAGGCCCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQASRAG*MGRPSG Trigger: CCCCGAGGGCCTGCCCATTCAGCCCGCCCTGGACGC...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAAGGCCGAACCAGGGCTaGGGGCGGTCCCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQRPNQG*GRSRGW Trigger: CCAGCCCCGGGACCGCCCTCAGCCCTGGTTCGGCCT...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATTTCCACCGCTCCCACTaGCTCCGCCTCGCCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LQRGERRRTPRGIPSPMDFHRSH*LRLALP Trigger: CGGGAGGGCGAGGCGGAGGCAGTGGGAGCGGTGGAA...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGCGGCTTCCCTTTCTaGATCCCCCGGGGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHGGFPF*IPRGLL Trigger: GAGGAGGCCCCGGGGGATGCAGAAAGGGAAGCCGCC...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATGCGCGGGCAGCCTCCTaGCCCTGCTGGAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LQRGERRRTPRGIPSPMDARAAS*PCWSSS Trigger: AGAGGAGCTCCAGCAGGGCCAGGAGGCTGCCCGCGC...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATTGCGGGAGGCCGAGGTaGGAGACTCGCTCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHCGRPR*ETRSRP Trigger: TGGCCTGGAGCGAGTCTCCCACCTCGGCCTCCCGCA...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGGGCCGTCACGATGGCTaGGTGCGCGCCCAGCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERGRHDG*VRAQRE Trigger: CTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCC...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGCTGGCCCGACGCCTaGCAGATGAGGAAGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHGWPDA*QMRKSS Trigger: CGAGGACTTCCTCATCTGGCAGGCGTCGGGCCAGCC...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATACCAGGCCGCGGGCGTaGATGTACTCCAGGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LQRGERRRTPRGIPSPMDTRPRA*MYSRAE Trigger: CTCCGCCCTGGAGTACATCCACGCCCGCGGCCTGGT...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAACGAAGTCGGTCAGCTTaGAGCGCCGGCAGGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQRSRSA*SAGRPG Trigger: ACCCGGCCTGCCGGCGCTTCAAGCTGACCGACTTCG...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAAGCCACGCGGAGGTCTaGGACCCTGGGGAAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQSHAEV*DPGEGG Trigger: GCCACCTTCCCCAGGGTCTCAGACCTCCGCGTGGCT...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGTCACGATGGCTGAGTaGGCGCCCAGCGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQVTMAE*APSESP Trigger: GGGGCTCTCGCTGGGCGCGCACTCAGCCATCGTGAC...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGCCCCAGGTGCTCCCTaGTGGCGATCACAGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRAPGAP*WRSQRS Trigger: GGAGCGCTGTGATCGCCATCAGGGAGCACCTGGGGC...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAAGCCACGGAGGGACGTaGGGGGTTTCGGGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQSHGGT*GVSGAA Trigger: AGCAGCTCCCGAAACCCCGCACGTCCCTCCGTGGCT...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAACAGGGGCGCCCCAGGTaGTCCCTGATGGCGATCACA | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQQGRPR*SLMAIT Trigger: TGTGATCGCCATCAGGGAGCACCTGGGGCGCCCCTG...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACGTAGGCCGTCACGATaGCTGAGTGCGCGCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRRRPSR*LSARPA Trigger: CGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGCAGGAGGATTGTTTaGGGCCAGGAGTTGACACCC | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHGRRIV*GQELTP Trigger: GGGTGTCAACTCCTGGCCTCAAACAATCCTCCTGCC...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATGCAGCCTCCTGGCCCTaGTGGAGCTCCTCTAATGTC | + |
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Preference number: 4 (lower is better) Translates to: LQRGERRRTPRGIPSPMDAASWP*WSSSNV Trigger: GACATTAGAGGAGCTCCAGCAGGGCCAGGAGGCTGC...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGGCCGGCTGTGGTCAGTaGCCGGCACTTAGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERAGCGQ*PALRAH Trigger: ATGAGCCCTAAGTGCCGGGCACTGACCACAGCCGGC...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATAGGCCCACCTTGGGCTaGATGAAGGCCATGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LQRGERRRTPRGIPSPMDRPTLG*MKAMRS Trigger: GGACCTCATGGCCTTCATCCAGCCCAAGGTGGGCCT...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACCGCGAGGCCTCGTGTaGCCGAAGTCGGTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRPRGLV*PKSVSL Trigger: CAAGCTGACCGACTTCGGCCACACGAGGCCTCGCGG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGTCTGAGGCCCTCATaGACCAAGGGAGGAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHGLRPS*TKGGMQ Trigger: CTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACC...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCTCGGACCAGGGTCTaGGCACTCAGCGTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: RNAACREERGGGRRGESQARTRV*ALSVIM Trigger: CATGATGACGCTGAGTGCTCAGACCCTGGTCCGAGC...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGCCGACGCCTGCCAGATaGGGAAGTCCTCGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERPTPAR*GSPRRR Trigger: CCTTCTACGAGGACTTCCTCATCTGGCAGGCGTCGG...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACGTCCTCCGAAGCCCCTaGCTCCGCCGGCCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHVLRSP*LRRPFL Trigger: GAGGAAGGGCCGGCGGAGGCAGGGGCTTCGGAGGAC...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGCGGGAGCTGCTTCAGTaGCAGGGGTGTGCCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERRELLQ*QGCAFL Trigger: CAGAAAGGCACACCCCTGGCACTGAAGCAGCTCCCG...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACGGGGTTTCGGGAGCTaGTTCAGTGCCAGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRRGFGS*FSARGV Trigger: CACACCCCTGGCACTGAAGCAGCTCCCGAAACCCCG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGAAGCTGTAGGAGTGTaGCGACTCGATGCCAATGCC | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHEAVGV*RLDANA Trigger: GGCATTGGCATCGAGTCGGCACACTCCTACAGCTTC...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACCGACTCGATGCCAATaGCGTAGGCCGTCACGATGG | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRPTRCQ*RRPSRW Trigger: CCATCGTGACGGCCTACGGCATTGGCATCGAGTCGG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGAGTGTGCCGACTCGATaGCAATGCCGTAGGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERSVPTR*QCRRPS Trigger: TGACGGCCTACGGCATTGGCATCGAGTCGGCACACT...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACGCCATGAGGTCCCCGTaGAGGACGGGCTCCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHAMRSP*RTGSVR Trigger: CCTGACGGAGCCCGTCCTGCACGGGGACCTCATGGC...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGAGAGCAACAGCAGAGTaGGGGGATGAGGAGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERRATAE*GDEEAD Trigger: GTCTGCCTCCTCATCCCCCCACTCTGCTGTTGCTCT...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACTTTCTGACGATGGGTaGCCAGAAGGACGCGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRLSDDG*PEGRGH Trigger: ATGGCCGCGTCCTTCTGGTCACCCATCGTCAGAAAG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATTTAACAGACATTTCCTaGTCCCTGCTGCAGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: QPAERREEEDAEGNPKPHLTDIS*SLLQAI Trigger: GATGGCCTGCAGCAGGGATCAGGAAATGTCTGTTAA...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAACATCACAGAGAGGGTaGTGCCAGGTGGGAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRTSQRG*CQVGGR Trigger: TCTCCCTCCCACCTGGCACCACCCTCTCTGTGATGT...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACCCAAGCCCCATGGATaGAAACACACCGAGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: DMQRSEALMDQGRNAACRPKPHG*KHTEET Trigger: TGTCTCCTCGGTGTGTTTTCATCCATGGGGCTTGGG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR GCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGCTTCCTCAGACTGTTTaGCGGGCATCTCTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERLPQTV*RASLLQ Trigger: TTGGAGGAGAGATGCCCGGCAAACAGTCTGAGGAAG...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACGGACATGCAGAGGTCTaGGGCCCTCATGGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHGHAEV*GPHGPR Trigger: CCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTCC...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACGCCTCCTGGCCCTGCTaGAGCTCCTCTAATGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHASWPC*SSSNVR Trigger: CCTGACATTAGAGGAGCTCCAGCAGGGCCAGGAGGC...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGGAATCCCAAGCCCCATaGATGAAAACACACCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERESQAP*MKTHRG Trigger: TCCTCGGTGTGTTTTCATCCATGGGGCTTGGGATTC...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | TGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGAGAGGAAAATTAGCCTAGCGTaGTGGCGCATGCCTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: CRGLRPSWTKGGMQPAERKISLA*WRMPVV Trigger: GACTACAGGCATGCGCCACCACGCTAGGCTAATTTT...CCTCTCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACAGGGGTGTGCCTTTCTaGCGATGGGTGACCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHRGVPF*RWVTRR Trigger: CCTTCTGGTCACCCATCGTCAGAAAGGCACACCCCT...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACTTTGAGGCCAGGAGTTaGCACCCACCTGGGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHFEARS*HPPGQH Trigger: ATGTTGCCCAGGTGGGTGTCAACTCCTGGCCTCAAA...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACTATTTGCAGAGTGGCTaGGGCGAGAGAAGGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHYLQSG*GERRQN Trigger: GTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATA...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACAGTTTATTTGCAGAGTaGCTGGGGCGAGAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHSLFAE*LGREKA Trigger: TGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACT...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACATTTTGAGACTGCAGTaGGCAGAGATAGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHILRLQ*AEIAPL Trigger: CAGTGGTGCTATCTCTGCTCACTGCAGTCTCAAAAT...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR TCA 90 bp | AGCGCCAGATGGAGTTTATTTGCAGAGTGGCTGGGGCGAGAGAAGGCAAAACACTTGAGCTGTGGATTTTaGGACTGCAGTGAGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SARWSLFAEWLGREKAKHLSCGF*DCSEQR Trigger: TCTCTGCTCACTGCAGTCTCAAAATCCACAGCTCAA...GTGTTTTGCCTTCTCTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS CCA 90 bp | TACACCAGGCCGCGGGCGTGGATGTACTCCAGGGCGGAGGCCAGCTaGGCGGCGCAGCGGTGCACCGCGGGCTGCGGGAGGCCCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: YTRPRAWMYSRAEAS*AAQRCTAGCGRPTL Trigger: CAAGGTGGGCCTCCCGCAGCCCGCGGTGCACCGCTGCGCCGCCCAGCTGGCCTCCGCCCTGGAGTACATCCACGCCCGCGGCCTGGTGTA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS CCA 90 bp | ATGGGCGGCCCGGCCAGGCGCAGCAGCGTCCCGCGAGGCCTCGTGTaGCCGAAGTCGGTCAGCTTGAAGCGCCGGCAGGCCGGGTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: MGGPARRSSVPRGLV*PKSVSLKRRQAGSH Trigger: GTGCGACCCGGCCTGCCGGCGCTTCAAGCTGACCGACTTCGGCCACACGAGGCCTCGCGGGACGCTGCTGCGCCTGGCCGGGCCGCCCAT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 90 bp | CGGGCTCCGTCAGGAAGCTGTAGGAGTGTGCCGACTCGATGCCAATaGCGTAGGCCGTCACGATGGCTGAGTGCGCGCCCAGCGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RAPSGSCRSVPTRCQ*RRPSRWLSARPARA Trigger: GGCTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACAGCTTCCTGACGGAGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 90 bp | GCAGGACGGGCTCCGTCAGGAAGCTGTAGGAGTGTGCCGACTCGATaGCAATGCCGTAGGCCGTCACGATGGCTGAGTGCGCGCCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: AGRAPSGSCRSVPTR*QCRRPSRWLSARPA Trigger: CGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACAGCTTCCTGACGGAGCCCGTCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGACCGAAGTCGGTCAGCTaGAAGCGCCGGCAGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: DMQRSEALMDQGRNAACRPKSVS*KRRQAG Trigger: CCCGGCCTGCCGGCGCTTCAAGCTGACCGACTTCGG...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS TCA 90 bp | GGAGTGTGCCGACTCGATGCCAATGCCGTAGGCCGTCACGATGGCTaGGTGCGCGCCCAGCGAGAGCCCCACACAGAACTCGTACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GVCRLDANAVGRHDG*VRAQREPHTELVQE Trigger: TTCCTGTACGAGTTCTGTGTGGGGCTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATGGATAGACACCAAAAGCCGTaGGCCTTGGGGGCCTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: LQRGERRRTPRGIPSPMDRHQKP*ALGASG Trigger: ACCCGAGGCCCCCAAGGCCAACGGCTTTTGGTGTCT...ATCCATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS CCA 90 bp | TGTAGGAGTGTGCCGACTCGATGCCAATGCCGTAGGCCGTCACGATaGCTGAGTGCGCGCCCAGCGAGAGCCCCACACAGAACTCGTACA | + |
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Preference number: 5 (lower is better) Translates to: CRSVPTRCQCRRPSR*LSARPARAPHRTRT Trigger: TGTACGAGTTCTGTGTGGGGCTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | GACATGCAGAGGTCTGAGGCCCTCATGGACCAAGGGAGGAATGCAGCCTGCAGATGCGGGAGGCCCACCTaGGGCTGGATGAAGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: DMQRSEALMDQGRNAACRCGRPT*GWMKAM Trigger: CATGGCCTTCATCCAGCCCAAGGTGGGCCTCCCGCA...TCTGCAGGCTGCATTCCTCCCTTGGTCCATGAGGGCCTCAGACCTCTGCATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | CAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCCCCATCCAGATGGAGTTTATTaGCAGAGTGGCTGGGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: QPAERREEEDAEGNPKPHPDGVY*QSGWGE Trigger: CTCGCCCCAGCCACTCTGCAAATAAACTCCATCTGG...ATGGGGCTTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAACCTTCCTCAGACTGTTaGCCGGGCATCTCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RNAACREERGGGRRGESQPSSDC*PGISPP Trigger: TGGAGGAGAGATGCCCGGCAAACAGTCTGAGGAAGG...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS-3UTR CAA 90 bp | AGGAATGCAGCCTGCAGAGAGGAGAGAGGAGGAGGACGCCGAGGGGAATCCCAAGCTGAGGCAGGAAGATaGCTTGAGCTGTGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: RNAACREERGGGRRGESQAEAGR*LELWIL Trigger: CAAAATCCACAGCTCAAGCAATCTTCCTGCCTCAGC...TTGGGATTCCCCTCGGCGTCCTCCTCCTCTCTCCTCTCTGCAGGCTGCATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413299.6 |
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| CDS CCA 72 bp | CCGCGGGCGTGGATGTACTCCAGGGCGGAGGCCAGCTaGGCGGCGCAGCGGTGCACCGCGGGCTGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PRAWMYSRAEAS*AAQRCTAGCGR Trigger: CCTCCCGCAGCCCGCGGTGCACCGCTGCGCCGCCCAGCTGGCCTCCGCCCTGGAGTACATCCACGCCCGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS TCA 72 bp | CCTCGGCCAGGGGCCGGTCCCAGGGGAAGTAGCCCGTaGGGAGGCAGAAGAGCAGGACGCCCAGCGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRPGAGPRGSSP*GGRRAGRPAPR Trigger: CCTGGGCGCTGGGCGTCCTGCTCTTCTGCCTCCTCACGGGCTACTTCCCCTGGGACCGGCCCCTGGCCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS TCA 72 bp | GAGGGCGGTCCCGGGGCTGGCCCGACGCCTGCCAGATaGGGAAGTCCTCGTAGAAGGGGTCGGCCTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EGGPGAGPTPAR*GSPRRRGRPRP Trigger: TGGCCGAGGCCGACCCCTTCTACGAGGACTTCCTCATCTGGCAGGCGTCGGGCCAGCCCCGGGACCGCCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS CCA 72 bp | AGCGTCATCATGTCCTCCAGCGCGCGGGCAGCCTCCTaGCCCTGCTGGAGCTCCTCTAATGTCAGGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SVIMSSSARAAS*PCWSSSNVRPP Trigger: GGGCGGCCTGACATTAGAGGAGCTCCAGCAGGGCCAGGAGGCTGCCCGCGCGCTGGAGGACATGATGACGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS CCA 72 bp | GTGCCGACTCGATGCCAATGCCGTAGGCCGTCACGATaGCTGAGTGCGCGCCCAGCGAGAGCCCCACACAGA | + |
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Preference number: 6 (lower is better) Translates to: VPTRCQCRRPSR*LSARPARAPHR Trigger: TCTGTGTGGGGCTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS TCA 72 bp | CGACTCGATGCCAATGCCGTAGGCCGTCACGATGGCTaGGTGCGCGCCCAGCGAGAGCCCCACACAGAACTC | + |
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Preference number: 6 (lower is better) Translates to: RLDANAVGRHDG*VRAQREPHTEL Trigger: GAGTTCTGTGTGGGGCTCTCGCTGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 72 bp | CCACACAGAACTCGTACAGGAAGCCACGGAGGGACGTaGGGGGTTTCGGGAGCTGCTTCAGTGCCAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PHRTRTGSHGGT*GVSGAASVPGV Trigger: CACCCCTGGCACTGAAGCAGCTCCCGAAACCCCGCACGTCCCTCCGTGGCTTCCTGTACGAGTTCTGTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS TCA 72 bp | GCTTCAGTGCCAGGGGTGTGCCTTTCTGACGATGGGTaGCCAGAAGGACGCGGCCATAGCAACCCTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ASVPGVCLSDDG*PEGRGHSNPGP Trigger: TGGGCCAGGGTTGCTATGGCCGCGTCCTTCTGGTCACCCATCGTCAGAAAGGCACACCCCTGGCACTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 72 bp | TCAGGAAGCTGTAGGAGTGTGCCGACTCGATGCCAATaGCGTAGGCCGTCACGATGGCTGAGTGCGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGSCRSVPTRCQ*RRPSRWLSARP Trigger: TGGGCGCGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACAGCTTCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 72 bp | GCTCCGTCAGGAAGCTGTAGGAGTGTGCCGACTCGATaGCAATGCCGTAGGCCGTCACGATGGCTGAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: APSGSCRSVPTR*QCRRPSRWLSA Trigger: CGCACTCAGCCATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACAGCTTCCTGACGGAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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| CDS GCA 72 bp | GTGCAGGACGGGCTCCGTCAGGAAGCTGTAGGAGTGTaGCGACTCGATGCCAATGCCGTAGGCCGTCACGAT | + |
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Preference number: 6 (lower is better) Translates to: VQDGLRQEAVGV*RLDANAVGRHD Trigger: ATCGTGACGGCCTACGGCATTGGCATCGAGTCGGCACACTCCTACAGCTTCCTGACGGAGCCCGTCCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344158.4 ENST00000413299.6 |
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