RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SBK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188322

Ensembl transcript IDs: ENST00000341901.5, ENST00000671413.3

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAGGTGCCGGGCCGCGTCCTGCCTAGTCTACCGCTGCGCCCCCTaGCCCGCGGCGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCA +
Preference number: 1 (lower is better)
Translates to: TRCRAASCLVYRCAP*PAARWLHSLPPHRA
Trigger: TGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCGCCGCGGGGCAGGGGGCGCAGCGGTAGACTAGGCAGGACGCGGCCCGGCACCTGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GGCCTCCTTGCCGGATTTCCTGAGGGCTGTGGTGCAAGGCAGGCCTaGGCGCCCTGGGACAGCTGCCTGGGAGGACCAGGGTGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: GLLAGFPEGCGARQA*APWDSCLGGPGCGG
Trigger: CCCACCACACCCTGGTCCTCCCAGGCAGCTGTCCCAGGGCGCCCAGGCCTGCCTTGCACCACAGCCCTCAGGAAATCCGGCAAGGAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 90 bp CAGAGGAGGTGGCAGCACCAGGGCCCCAACCTGGTGTTCCGGTTCTaGTCTGGGGTCAGGCTGGAGGCTGGCCCTCTGGGTGCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: QRRWQHQGPNLVFRF*SGVRLEAGPLGASG
Trigger: CCCAGAGGCACCCAGAGGGCCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAACACCAGGTTGGGGCCCTGGTGCTGCCACCTCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp CTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTaGGAGGACCCGGCAGAGGTCCCTGGGCCTGGGACAGTGCGGCTG +
Preference number: 1 (lower is better)
Translates to: LLEAQATTSRLCGKG*EDPAEVPGPGTVRL
Trigger: CAGCCGCACTGTCCCAGGCCCAGGGACCTCTGCCGGGTCCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp CCTCTCCTAAGGGGCAAAGGGTCCCAGCCCGACCAGCAGAGGAGGTaGCAGCACCAGGGCCCCAACCTGGTGTTCCGGTTCTGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: PLLRGKGSQPDQQRR*QHQGPNLVFRFCSG
Trigger: CCCAGAGCAGAACCGGAACACCAGGTTGGGGCCCTGGTGCTGCCACCTCCTCTGCTGGTCGGGCTGGGACCCTTTGCCCCTTAGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp CAGGGAACATTCTGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTaGAGACCCTCTAGCCGACCTGTGGCCCCGCCTCCCATCCAGGGG +
Preference number: 1 (lower is better)
Translates to: QGTFWQPWGSVQWAW*RPSSRPVAPPPIQG
Trigger: CCCCTGGATGGGAGGCGGGGCCACAGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GTGTGGGCTCAGGGAACATTCTGGCAGCCGTGGGGTTCTGTTCAGTaGGCCTGGTGGAGACCCTCTAGCCGACCTGTGGCCCCGCCTCCC +
Preference number: 1 (lower is better)
Translates to: VWAQGTFWQPWGSVQ*AWWRPSSRPVAPPP
Trigger: GGGAGGCGGGGCCACAGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GCTCAGGGAACATTCTGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTaGTGGAGACCCTCTAGCCGACCTGTGGCCCCGCCTCCCATCCAG +
Preference number: 1 (lower is better)
Translates to: AQGTFWQPWGSVQWA*WRPSSRPVAPPPIQ
Trigger: CTGGATGGGAGGCGGGGCCACAGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GCTAGGACTCTACCCAGGACCCCGCCCCAGGCCCTGAGCCAAGCATaGACGCTGATGTCAGCCACCAGGACTGTCCCACTGGCCACAGTG +
Preference number: 1 (lower is better)
Translates to: ARTLPRTPPQALSQA*TLMSATRTVPLATV
Trigger: CACTGTGGCCAGTGGGACAGTCCTGGTGGCTGACATCAGCGTCCATGCTTGGCTCAGGGCCTGGGGCGGGGTCCTGGGTAGAGTCCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GTCCCACTGGCCACAGTGTGGGCTCAGGGAACATTCTGGCAGCCGTaGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCT +
Preference number: 1 (lower is better)
Translates to: VPLATVWAQGTFWQP*GSVQWAWWRPSSRP
Trigger: AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GTGGAGAGGTTGGGGCACCAGCCAGAAAGTGCTCGGAGTTCACTCTaGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACC +
Preference number: 1 (lower is better)
Translates to: VERLGHQPESARSSL*PAWPIKEPLKWPRT
Trigger: GGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAGAGTGAACTCCGAGCACTTTCTGGCTGGTGCCCCAACCTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp TGGTGTTCCGGTTCTGCTCTGGGGTCAGGCTGGAGGCTGGCCCTCTaGGTGCCTCTGGGAATGAGGGGGCTGGGCTACATAACTATGGTC +
Preference number: 1 (lower is better)
Translates to: WCSGSALGSGWRLAL*VPLGMRGLGYITMV
Trigger: GACCATAGTTATGTAGCCCAGCCCCCTCATTCCCAGAGGCACCCAGAGGGCCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp ACCAGGACTGTCCCACTGGCCACAGTGTGGGCTCAGGGAACATTCTaGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCT +
Preference number: 1 (lower is better)
Translates to: TRTVPLATVWAQGTF*QPWGSVQWAWWRPS
Trigger: AGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGGGACAGTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp ACCTGGTCCTTGGAGGGAGTGGGGGTTTGCTACTTACCTGGCATGTaGAGGGCCCATACCCACTGGGGAGGTGGAGTCTGGAGAGGAGTG +
Preference number: 1 (lower is better)
Translates to: TWSLEGVGVCYLPGM*RAHTHWGGGVWRGV
Trigger: CACTCCTCTCCAGACTCCACCTCCCCAGTGGGTATGGGCCCTCCACATGCCAGGTAAGTAGCAAACCCCCACTCCCTCCAAGGACCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp TGGACGCTGATGTCAGCCACCAGGACTGTCCCACTGGCCACAGTGTaGGCTCAGGGAACATTCTGGCAGCCGTGGGGTTCTGTTCAGTGG +
Preference number: 1 (lower is better)
Translates to: WTLMSATRTVPLATV*AQGTFWQPWGSVQW
Trigger: CCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGGGACAGTCCTGGTGGCTGACATCAGCGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GCACCCTACACATGTGCACACACACCTAGTCACACACTCGCCCCCTaGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGGTCCTA +
Preference number: 1 (lower is better)
Translates to: APYTCAHTPSHTLAP*CPPPPFSHPHMQVL
Trigger: TAGGACCTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGACTAGGTGTGTGTGCACATGTGTAGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGGTaGCCTCCGAATTCTCGGGTCTGTGCGGCTTGGCTCCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVVW*PPNSRVCAAWLLWA
Trigger: GGCCCAGAGGAGCCAAGCCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACACACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp AGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTaGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: RNPGEISSTNQLATC*KPRLLRLGCVARAG
Trigger: CCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 90 bp CCAAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTaGTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCT +
Preference number: 1 (lower is better)
Translates to: PRNPGEISSTNQLAT*WKPRLLRLGCVARA
Trigger: AGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTaGTGGCCTCCGAATTCTCGGGTCTGTGCGGCTTGGCTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCVCVV*WPPNSRVCAAWLLW
Trigger: CCAGAGGAGCCAAGCCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp CGCACTTATGCGACATCCAGACATTTGCTACATTTTCCAAGGGCTTaGCCTCTCCCCTCCAGCCTCCAGAAGGGAGGGCAGGACACAGCT +
Preference number: 1 (lower is better)
Translates to: RTYATSRHLLHFPRA*PLPSSLQKGGQDTA
Trigger: AGCTGTGTCCTGCCCTCCCTTCTGGAGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCGCATAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp TGGGAAGCACCGAAGGACAGGGGGCAGTGTGGGGGACACAGGGTCTaGGACAGAGACACGCACACACATACACACATACACACATACACA +
Preference number: 1 (lower is better)
Translates to: WEAPKDRGQCGGHRV*DRDTHTHTHIHTYT
Trigger: TGTGTATGTGTGTATGTGTGTATGTGTGTGCGTGTCTCTGTCCCAGACCCTGTGTCCCCCACACTGCCCCCTGTCCTTCGGTGCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 90 bp GGAGAGAGCTCTATTTCTCAGCCAGTGCCAAGCTACCCTCCCTCCTaGGCTGTGATTTCATTTGTGCAATGGGGGTGTGCAGGAGTCACT +
Preference number: 1 (lower is better)
Translates to: GESSISQPVPSYPPS*AVISFVQWGCAGVT
Trigger: AGTGACTCCTGCACACCCCCATTGCACAAATGAAATCACAGCCCAGGAGGGAGGGTAGCTTGGCACTGGCTGAGAAATAGAGCTCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR TCA 90 bp GCTCTATTTCTCAGCCAGTGCCAAGCTACCCTCCCTCCTGGGCTGTaGTTTCATTTGTGCAATGGGGGTGTGCAGGAGTCACTAGCTTCT +
Preference number: 1 (lower is better)
Translates to: ALFLSQCQATLPPGL*FHLCNGGVQESLAS
Trigger: AGAAGCTAGTGACTCCTGCACACCCCCATTGCACAAATGAAATCACAGCCCAGGAGGGAGGGTAGCTTGGCACTGGCTGAGAAATAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 90 bp AGCACGGCAAGGGACGTCTACTGTGGAATCTCGATTCCTAGTTATTaGAGGAGAGATCAGGATGTCGCGAGGCCTAAGGCAAAAGGAGAA +
Preference number: 1 (lower is better)
Translates to: STARDVYCGISIPSY*RRDQDVARPKAKGE
Trigger: TTCTCCTTTTGCCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTCCACAGTAGACGTCCCTTGCCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 90 bp AGAGAAGTAAATAACACATTTAAAAACCTTCTCAGGGCCAAAGGATaGCAGAGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATG +
Preference number: 1 (lower is better)
Translates to: REVNNTFKNLLRAKG*QSIYKHMEEGRQDM
Trigger: CATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACTCTGGCATCCTTTGGCCCTGAGAAGGTTTTTAAATGTGTTATTTACTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGAGAGGTCCCTGGGCCTaGGACAGTGCGGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRRGPWA*DSAAGR
Trigger: CCTGCCAGCCGCACTGTCCCAGGCCCAGGGACCTCT...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGCCCGGCAGAGGTCCCTaGGCCTGGGACAGTGCGGCT +
Preference number: 2 (lower is better)
Translates to: ERESARERESEHGKGRLLPGRGP*AWDSAA
Trigger: AGCCGCACTGTCCCAGGCCCAGGGACCTCTGCCGGG...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGTGGGCCGGGGGCAGTaGCCAGGGCCTTCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPVGRGQ*PGPSLR
Trigger: TCTCAGAGAAGGCCCTGGTCACTGCCCCCGGCCCAC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGGCTGGCAGGGGGAGCTaGGACCTGCTCTCGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ERESARERESEHGKGRLLAGRGS*DLLSAP
Trigger: TGGAGCCGAGAGCAGGTCCCAGCTCCCCCTGCCAGC...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGCACACACTCGCCCCCTaGTGTCCACCGCCCCCATTC +
Preference number: 2 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRHTLAP*CPPPPF
Trigger: GAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 90 bp GGTGGGCCGGGGGCAGTGACCAGGGCCTTCTCTGAGACCTGGTCCTaGGAGGGAGTGGGGGTTTGCTACTTACCTGGCATGTGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: GGPGAVTRAFSETWS*EGVGVCYLPGMWRA
Trigger: GGCCCTCCACATGCCAGGTAAGTAGCAAACCCCCACTCCCTCCAAGGACCAGGTCTCAGAGAAGGCCCTGGTCACTGCCCCCGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGGTGGGACCGCAGGATaGTCTGCCAGGGGGTATGGA +
Preference number: 2 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRGGTAG*SARGYG
Trigger: TCCATACCCCCTGGCAGATCATCCTGCGGTCCCACC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGTGCCTAGTCTACCGCTaGGCCCCCTGCCCCGCGGCG +
Preference number: 2 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVCLVYR*APCPAA
Trigger: CGCCGCGGGGCAGGGGGCGCAGCGGTAGACTAGGCA...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGGGCCTGAACCAACCTaGAGGGGCCTCCTTGCCGGA +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPGPEPT*RGLLAG
Trigger: TCCGGCAAGGAGGCCCCTGCAGGTTGGTTCAGGCCC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTAGGGCAGGACACAGCTaGCCTTCGCTCACTGCCCTG +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPRAGHS*PSLTAL
Trigger: CAGGGCAGTGAGCGAAGGGCAGCTGTGTCCTGCCCT...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGGAGGGGATCTGGGGTaGGACCGCAGGATGATCTGC +
Preference number: 2 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGGGDLG*DRRMIC
Trigger: GCAGATCATCCTGCGGTCCCACCCCAGATCCCCTCC...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GGGGGAGCTGGGACCTGCTCTCGGCTCCACACTAACTCCCCTGCCCTAAGGATGCAGGACAATCCCTTGTaGTTAGGGGGAGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GGAGTCSRLHTNSPALRMQDNPL*LGGGAG
Trigger: CCCCGCCCCTCCCCCTAACCACAAGGGATTGTCCTG...CATCCTTAGGGCAGGGGAGTTAGTGTGGAGCCGAGAGCAGGTCCCAGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGTTCCGGTTCTGCTCTaGGGTCAGGCTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPVPVLL*GQAGGW
Trigger: CCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAAC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp TCCCAGCCTGTGCCCAGGGGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCGACCGCAGGATGATCTaGCAGGGGGTATGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: SQPVPRGLKPPLCPTLQSDRRMI*QGVWKA
Trigger: GGCCTTCCATACCCCCTGGCAGATCATCCTGCGGTC...GGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCCCCTGGGCACAGGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGCTCGGAGTTCACTCTaGCCGGCCTGGCCCATCAAA +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPARSSL*PAWPIK
Trigger: TTTGATGGGCCAGGCCGGCCAGAGTGAACTCCGAGC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCTGCCCCGCGGCGAGGTaGCTCCATTCCCTACCGCCG +
Preference number: 2 (lower is better)
Translates to: KKPRRNFQHEPARHLLEACPAAR*LHSLPP
Trigger: CGGCGGTAGGGAATGGAGCCACCTCGCCGCGGGGCA...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGATCTGCCAGGGGGTATaGAAGGCCAGGAGCAACGAG +
Preference number: 2 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQICQGV*KARSNE
Trigger: CTCGTTGCTCCTGGCCTTCCATACCCCCTGGCAGAT...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGAAAGGATGGCACCCATaGGTCTGCACCCTACACATG +
Preference number: 2 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRKGWHP*VCTLHM
Trigger: CATGTGTAGGGTGCAGACGCATGGGTGCCATCCTTT...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGCTAGGGGTCTTTGGTaGCCCCCTCACCAGCCCGCC +
Preference number: 2 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAARGLW*PPHQPA
Trigger: GGCGGGCTGGTGAGGGGGCCACCAAAGACCCCTAGC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGAGAGGCAGCCCCGATaGGCTCCAGGTGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: AGETPEQDLNREREREKEERQPR*APGGPG
Trigger: CCCCGGCCCACCTGGAGCCCATCGGGGCTGCCTCTC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGCTCCCTCCTGGGCTGTaGTTTCATTTGTGCAATGGG +
Preference number: 2 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQLPPGL*FHLCNG
Trigger: CCCATTGCACAAATGAAATCACAGCCCAGGAGGGAG...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCGAATTCTCGGGTCTGTaGGGCTTGGCTCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VQESLASRGLSRTYTHLCEFSGL*GLAPLG
Trigger: GCCCAGAGGAGCCAAGCCGCACAGACCCGAGAATTC...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGGTGAGGATGGGGTCTTaGAGGTTGGCATGTTTGACC +
Preference number: 2 (lower is better)
Translates to: ERESARERESEHGKGRLLVRMGS*RLACLT
Trigger: GGTCAAACATGCCAACCTCCAAGACCCCATCCTCAC...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGGTTTGCTACTTACCTaGCATGTGGAGGGCCCATAC +
Preference number: 2 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPGLLLT*HVEGPY
Trigger: GTATGGGCCCTCCACATGCCAGGTAAGTAGCAAACC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTCTTCGCTCACTGCCCTaGTCCCAGCCTGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSLRSLP*SQPVPR
Trigger: CCTGGGCACAGGCTGGGATCAGGGCAGTGAGCGAAG...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGCCTGGCAGGGGACCCTaGCAGGGACAGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: AGETPEQDLNREREREKEPGRGP*QGQPHP
Trigger: TGGGTGAGGCTGTCCCTGTCAGGGTCCCCTGCCAGG...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGCTATTTCTCAGCCAGTaGCAAGCTACCCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRLFLSQ*QATLPP
Trigger: AGGAGGGAGGGTAGCTTGGCACTGGCTGAGAAATAG...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GGGGGAGCTGGGACCTGCTCTCGGCTCCACACTAACTCCCCTGCCCTAAGGATGAGCTACCCTCCCTCCTaGGCTGTGATTTCATTTGTG +
Preference number: 2 (lower is better)
Translates to: GGAGTCSRLHTNSPALRMSYPPS*AVISFV
Trigger: CACAAATGAAATCACAGCCCAGGAGGGAGGGTAGCT...CATCCTTAGGGCAGGGGAGTTAGTGTGGAGCCGAGAGCAGGTCCCAGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGTGCTACCTGGGGGCCTaGACCAACCTGCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: AGETPEQDLNREREREKECYLGA*TNLQGP
Trigger: AGGCCCCTGCAGGTTGGTTCAGGCCCCCAGGTAGCA...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGTGTGTGTTGTGTGGTaGCCTCCGAATTCTCGGGTC +
Preference number: 2 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVVCVVW*PPNSRV
Trigger: GACCCGAGAATTCGGAGGCCACCACACAACACACAC...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGGTGGCCTCCGAATTCTCGGGTCTGTGCGGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VCVCVCVCVCVCVCV*CGGLRILGSVRLGS
Trigger: GGAGCCAAGCCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACACACACACACACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 90 bp ACGCACTTATGCGACATCCAGACATTTGCTACATTTTCCAAGGGCTaGGCCTCTCCCCTCCAGCCTCCAGAAGGGAGGGCAGGACACAGC +
Preference number: 2 (lower is better)
Translates to: THLCDIQTFATFSKG*ASPLQPPEGRAGHS
Trigger: GCTGTGTCCTGCCCTCCCTTCTGGAGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCGCATAAGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGCCCGAAAGCTCCCTTaGTCCTGGCGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSARKLP*SWRVCV
Trigger: CACACACACACGCCAGGAGCAAGGGAGCTTTCGGGC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTCATTTTCCAAGGGCTTaGCCTCTCCCCTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSHFPRA*PLPSSL
Trigger: GAGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATG...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGATTTCATTTGTGCAATaGGGGTGTGCAGGAGTCACT +
Preference number: 2 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRISFVQ*GCAGVT
Trigger: AGTGACTCCTGCACACCCCCATTGCACAAATGAAAT...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACTGCCGGGCCGCGTCCTaGCTAGTCTACCGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNCRAAS*LVYRCA
Trigger: GGCGCAGCGGTAGACTAGGCAGGACGCGGCCCGGCA...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGCAGCTCGCCACCTGCTaGAAGCCCAGGCTACTACGT +
Preference number: 2 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRQLATC*KPRLLR
Trigger: ACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTG...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACGGTGCAAGGCAGGCCTaGGCGCCCTGGGACAGCTGC +
Preference number: 2 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNGARQA*APWDSC
Trigger: GCAGCTGTCCCAGGGCGCCCAGGCCTGCCTTGCACC...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCGCGCTAGGGGTCTTTaGTGGCCCCCTCACCAGCCC +
Preference number: 2 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNRARGL*WPPHQP
Trigger: GGGCTGGTGAGGGGGCCACCAAAGACCCCTAGCGCG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTTGTGTGTGTGTTGTGTaGTGGCCTCCGAATTCTCGG +
Preference number: 2 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSCVCVV*WPPNSR
Trigger: CCGAGAATTCGGAGGCCACCACACAACACACACACA...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR TCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGGGAGGTTGGCATGTTTaGCCCCAAGAAACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRGGWHV*PQETQE
Trigger: CTCCTGGGTTTCTTGGGGTCAAACATGCCAACCTCC...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCTGTGTGGCAAGGGCTaGGAGGACCCGGCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNLCGKG*EDPAEV
Trigger: GACCTCTGCCGGGTCCTCCCAGCCCTTGCCACACAG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAAGTGGGGCCAGGCCCTaGGGCCACCCCACACTGTTT +
Preference number: 2 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQSGARP*GHPTLF
Trigger: AAACAGTGTGGGGTGGCCCCAGGGCCTGGCCCCACT...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR GCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCACATACACGCACTTATaGGACATCCAGACATTTGCT +
Preference number: 2 (lower is better)
Translates to: KKPRRNFQHEPARHLLEATYTHL*DIQTFA
Trigger: AGCAAATGTCTGGATGTCGCATAAGTGCGTGTATGT...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAGGCGTCTGGGAGTGTaGCCCGAAAGCTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNRRLGV*PESSLA
Trigger: AGCAAGGGAGCTTTCGGGCCACACTCCCAGACGCCT...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAACAGCCTCACCCATGTaGTGCTTATTGCGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQTASPM*CLLRGS
Trigger: GGACCCCCGCAATAAGCACCACATGGGTGAGGCTGT...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAAAGCTCCCTTGCTCCTaGCGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQKLPCS*RVCVCV
Trigger: CACACACACACACACACGCCAGGAGCAAGGGAGCTT...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp CGGGCCGCGTCCTGCCTAGTCTACCGCTGCGCCCCCTaGCCCGCGGCGAGGTGGCTCCATTCCCTACCGCCG +
Preference number: 3 (lower is better)
Translates to: RAASCLVYRCAP*PAARWLHSLPP
Trigger: CGGCGGTAGGGAATGGAGCCACCTCGCCGCGGGGCAGGGGGCGCAGCGGTAGACTAGGCAGGACGCGGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp CTAGTCTACCGCTGCGCCCCCTGCCCCGCGGCGAGGTaGCTCCATTCCCTACCGCCGCACCGGGCACCGGCT +
Preference number: 3 (lower is better)
Translates to: LVYRCAPCPAAR*LHSLPPHRAPA
Trigger: AGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCGCCGCGGGGCAGGGGGCGCAGCGGTAGACTAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GTGTGGCAAGGGCTGGGAGGACCCGGCAGAGGTCCCTaGGCCTGGGACAGTGCGGCTGGCAGGGGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: VWQGLGGPGRGP*AWDSAAGRGSW
Trigger: CCAGCTCCCCCTGCCAGCCGCACTGTCCCAGGCCCAGGGACCTCTGCCGGGTCCTCCCAGCCCTTGCCACAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp TTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGTaGCCCCGCCTCCCATCCAGGGGGCTTCCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: FSGPGGDPLADL*PRLPSRGLPVP
Trigger: GGGCACGGGAAGCCCCCTGGATGGGAGGCGGGGCCACAGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GCACCAGGGCCCCAACCTGGTGTTCCGGTTCTGCTCTaGGGTCAGGCTGGAGGCTGGCCCTCTGGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: APGPQPGVPVLL*GQAGGWPSGCL
Trigger: GAGGCACCCAGAGGGCCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAACACCAGGTTGGGGCCCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp TGGCAGCACCAGGGCCCCAACCTGGTGTTCCGGTTCTaGTCTGGGGTCAGGCTGGAGGCTGGCCCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: WQHQGPNLVFRF*SGVRLEAGPLG
Trigger: ACCCAGAGGGCCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAACACCAGGTTGGGGCCCTGGTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp AGGGGCAAAGGGTCCCAGCCCGACCAGCAGAGGAGGTaGCAGCACCAGGGCCCCAACCTGGTGTTCCGGTTC +
Preference number: 3 (lower is better)
Translates to: RGKGSQPDQQRR*QHQGPNLVFRF
Trigger: GAACCGGAACACCAGGTTGGGGCCCTGGTGCTGCCACCTCCTCTGCTGGTCGGGCTGGGACCCTTTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp CAGGGGACCCTGACAGGGACAGCCTCACCCATGTGGTaGTTATTGCGGGGGTCCCGGGCCTCCACAGAGAGG +
Preference number: 3 (lower is better)
Translates to: QGTLTGTASPMW*LLRGSRASTER
Trigger: CCTCTCTGTGGAGGCCCGGGACCCCCGCAATAAGCACCACATGGGTGAGGCTGTCCCTGTCAGGGTCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp CTGGGGTGGGACCGCAGGATGATCTGCCAGGGGGTATaGAAGGCCAGGAGCAACGAGTCCGGGTTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LGWDRRMICQGV*KARSNESGFQG
Trigger: GCCCTGGAACCCGGACTCGTTGCTCCTGGCCTTCCATACCCCCTGGCAGATCATCCTGCGGTCCCACCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp CTACCCAGGACCCCGCCCCAGGCCCTGAGCCAAGCATaGACGCTGATGTCAGCCACCAGGACTGTCCCACTG +
Preference number: 3 (lower is better)
Translates to: LPRTPPQALSQA*TLMSATRTVPL
Trigger: CAGTGGGACAGTCCTGGTGGCTGACATCAGCGTCCATGCTTGGCTCAGGGCCTGGGGCGGGGTCCTGGGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp AGAAGGGAGGGCAGGACACAGCTGCCCTTCGCTCACTaGCCTGATCCCAGCCTGTGCCCAGGGGCCTTAAGC +
Preference number: 3 (lower is better)
Translates to: RREGRTQLPFAH*PDPSLCPGALS
Trigger: GCTTAAGGCCCCTGGGCACAGGCTGGGATCAGGGCAGTGAGCGAAGGGCAGCTGTGTCCTGCCCTCCCTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp CAGGGAACATTCTGGCAGCCGTGGGGTTCTGTTCAGTaGGCCTGGTGGAGACCCTCTAGCCGACCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: QGTFWQPWGSVQ*AWWRPSSRPVA
Trigger: GGCCACAGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GTCCCACTGGCCACAGTGTGGGCTCAGGGAACATTCTaGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: VPLATVWAQGTF*QPWGSVQWAWW
Trigger: CCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CAA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCATGTCAGGACAATCCCTaGTGGTTAGGGGGAGGGGCG +
Preference number: 3 (lower is better)
Translates to: SHTRPLVSTAPILTPTHACQDNP*WLGGGA
Trigger: CGCCCCTCCCCCTAACCACAAGGGATTGTCCTGACA...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp CTGGTCCTTGGAGGGAGTGGGGGTTTGCTACTTACCTaGCATGTGGAGGGCCCATACCCACTGGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LVLGGSGGLLLT*HVEGPYPLGRW
Trigger: CCACCTCCCCAGTGGGTATGGGCCCTCCACATGCCAGGTAAGTAGCAAACCCCCACTCCCTCCAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GCCACAGTGTGGGCTCAGGGAACATTCTGGCAGCCGTaGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCT +
Preference number: 3 (lower is better)
Translates to: ATVWAQGTFWQP*GSVQWAWWRPS
Trigger: AGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CAA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCGGCCCGAAAGCTCCCTaGCTCCTGGCGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: VQESLASRGLSRTYTHLCGPKAP*LLACVC
Trigger: ACACACACACGCCAGGAGCAAGGGAGCTTTCGGGCC...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CAA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGACATTTTCCAAGGGCTaGGCCTCTCCCCTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRTFSKG*ASPLQP
Trigger: AGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATGT...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp TTGGAGGGAGTGGGGGTTTGCTACTTACCTGGCATGTaGAGGGCCCATACCCACTGGGGAGGTGGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: LEGVGVCYLPGM*RAHTHWGGGVW
Trigger: CCAGACTCCACCTCCCCAGTGGGTATGGGCCCTCCACATGCCAGGTAAGTAGCAAACCCCCACTCCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp ATGTCAGCCACCAGGACTGTCCCACTGGCCACAGTGTaGGCTCAGGGAACATTCTGGCAGCCGTGGGGTTCT +
Preference number: 3 (lower is better)
Translates to: MSATRTVPLATV*AQGTFWQPWGS
Trigger: AGAACCCCACGGCTGCCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGGGACAGTCCTGGTGGCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp CCCATTCTCACACCCACACATGCAGGTCCTACGCCCTaGACACTCCAGCGCCAGAAAAGTGGGAGACGTGAG +
Preference number: 3 (lower is better)
Translates to: PILTPTHAGPTP*TLQRQKSGRRE
Trigger: CTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACCTGCATGTGTGGGTGTGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CAA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGGCGACATCCAGACATTaGCTACATTTTCCAAGGGCT +
Preference number: 3 (lower is better)
Translates to: ERESARERESEHGKGRLLATSRH*LHFPRA
Trigger: AGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCGC...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp CCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTaGTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: PGEISSTNQLAT*WKPRLLRLGCV
Trigger: CACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTaGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: GEISSTNQLATC*KPRLLRLGCVA
Trigger: TGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GAGGGGTCTGGACGCACAGTCACTGAACGCAAAGGATaGCACCCATGCGTCTGCACCCTACACATGTGCACA +
Preference number: 3 (lower is better)
Translates to: EGSGRTVTERKG*HPCVCTLHMCT
Trigger: TGTGCACATGTGTAGGGTGCAGACGCATGGGTGCCATCCTTTGCGTTCAGTGACTGTGCGTCCAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR-3UTR CAA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGTTCTATCCCCACAAGTaGTCAGGACAATCCCTTGTG +
Preference number: 3 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGFYPHK*SGQSLV
Trigger: CACAAGGGATTGTCCTGACAACTTGTGGGGATAGAA...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGGTaGCCTCCGAATTCTCGGGTCTGTGCGGCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVVW*PPNSRVCAAWL
Trigger: GAGCCAAGCCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTaGTGGCCTCCGAATTCTCGGGTCTGTGCGGCTTGG +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVCVV*WPPNSRVCAAW
Trigger: CCAAGCCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CCA 72 bp TACCCTCCCTCCTGGGCTGTGATTTCATTTGTGCAATaGGGGTGTGCAGGAGTCACTAGCTTCTCGGGGCCT +
Preference number: 3 (lower is better)
Translates to: YPPSWAVISFVQ*GCAGVTSFSGP
Trigger: AGGCCCCGAGAAGCTAGTGACTCCTGCACACCCCCATTGCACAAATGAAATCACAGCCCAGGAGGGAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR GCA 72 bp AGGGACGTCTACTGTGGAATCTCGATTCCTAGTTATTaGAGGAGAGATCAGGATGTCGCGAGGCCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: RDVYCGISIPSY*RRDQDVARPKA
Trigger: TGCCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTCCACAGTAGACGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGCTGGGCCTGGGACAGTaGGGCTGGCAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPLGLGQ*GWQGEL
Trigger: CAGCTCCCCCTGCCAGCCGCACTGTCCCAGGCCCAG...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGTGCCCCGCGGCGAGGTaGCTCCATTCCCTACCGCCG +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPCPAAR*LHSLPP
Trigger: CGGCGGTAGGGAATGGAGCCACCTCGCCGCGGGGCA...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGGTGGGCCGGGGGCAGTaGCCAGGGCCTTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPVGRGQ*PGPSLR
Trigger: TCTCAGAGAAGGCCCTGGTCACTGCCCCCGGCCCAC...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGATCTGCCAGGGGGTATaGAAGGCCAGGAGCAACGAG +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPICQGV*KARSNE
Trigger: CTCGTTGCTCCTGGCCTTCCATACCCCCTGGCAGAT...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTCCGGGGTGCAAGCGGTaGCGCCAGGGGCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPPGCKR*RQGLSR
Trigger: GCGACTGAGCCCCTGGCGGCACCGCTTGCACCCCGG...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGAGCGGAACACCTCCTTaGCTGGGCCGCGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRSGTPP*LGRGAR
Trigger: CCGAGCGCCGCGGCCCAGCCAAGGAGGTGTTCCGCT...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGTGTGTGTGTGTTGTGTaGTGGCCTCCGAATTCTCGG +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPCVCVV*WPPNSR
Trigger: CCGAGAATTCGGAGGCCACCACACAACACACACACA...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCTGCCGCCCGTGCATaGAGTCCAGCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGAAARA*SPAPGP
Trigger: TGGGCCTGGCGCTGGACTTCATGCACGGGCGGCAGC...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGTCAGCACCGTCCGCTTaGGCGGCCCAGGCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ERESARERESEHGKGRLLSAPSA*AAQAPR
Trigger: TCGAGGCGCCTGGGCCGCTCAAGCGGACGGTGCTGA...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGCCATTTTTGTGCCTGTaGCCTTGTAGACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPPFLCL*PCRPPG
Trigger: ACCTGGTGGTCTACAAGGGCACAGGCACAAAAATGG...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCATGCCTAGTCTACCGCTaGGCCCCCTGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SHTRPLVSTAPILTPTHACLVYR*APCPAA
Trigger: CGCCGCGGGGCAGGGGGCGCAGCGGTAGACTAGGCA...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGGAACACCTCCTTGGCTaGGCCGCGGCGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQEHLLG*AAALGL
Trigger: GAGCCCGAGCGCCGCGGCCCAGCCAAGGAGGTGTTC...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCTGCCGCTCACGCGCTTaGCGCGGCAGCCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCCRSRA*RGSPRG
Trigger: GCCGCGTGGGCTGCCGCGTCAAGCGCGTGAGCGGCA...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGCCTGGCAGGGGACCCTaGCAGGGACAGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: ERESARERESEHGKGRLLPGRGP*QGQPHP
Trigger: TGGGTGAGGCTGTCCCTGTCAGGGTCCCCTGCCAGG...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGCCAGGCCCAGCTGCTaGACACAGCGCTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRARPSC*TQRFTV
Trigger: CACGGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGCGCGCTAGGGGTCTTTaGTGGCCCCCTCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQRARGL*WPPHQP
Trigger: GGGCTGGTGAGGGGGCCACCAAAGACCCCTAGCGCG...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGCTGGCAGGGGGAGCTaGGACCTGCTCTCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPAGRGS*DLLSAP
Trigger: TGGAGCCGAGAGCAGGTCCCAGCTCCCCCTGCCAGC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATGGCGGGGGCCCAGACTaGGGAGGGGGAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNGGGPD*GGGVLA
Trigger: CGCAAGGACTCCCCCTCCTCAGTCTGGGCCCCCGCC...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGTTCGTAGTGCTTGGTaGCGTCGCTGGCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRVRSAW*RRWRPV
Trigger: CACTGGCCGCCAGCGACGTCACCAAGCACTACGAAC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGCTTCGCTCACTGCCCTaGTCCCAGCCTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQLRSLP*SQPVPR
Trigger: CCTGGGCACAGGCTGGGATCAGGGCAGTGAGCGAAG...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGAGCGCCAGGCCCAGCTaGTGCACACAGCGCTTCACC +
Preference number: 4 (lower is better)
Translates to: ERESARERESEHGKGRLLSARPS*CTQRFT
Trigger: GGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGCGCT...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGCCACGCGGCGCGTCATaGCGAAGTCGGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRPRGAS*RSRPAL
Trigger: TAAAGCTGGCCGACTTCGGCATGACGCGCCGCGTGG...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGCGGGGACGGACCAGGTaGCGGGCCGCGTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVRGRTR*RAASCL
Trigger: TAGGCAGGACGCGGCCCGGCACCTGGTCCGTCCCCG...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCACCAGGGGGCTTCCCGTaGCCCACAGGCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SHTRPLVSTAPILTPTHAPGGFP*PTGQLR
Trigger: TCTGAGCTGGCCTGTGGGGCACGGGAAGCCCCCTGG...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGATCTTCTCCCTGGGCTaGGGCCGCGGGGACGCCGCG +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVIFSLG*GRGDAA
Trigger: CGCGGCGTCCCCGCGGCCCCAGCCCAGGGAGAAGAT...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGAGAGGTCCCTGGGCCTaGGACAGTGCGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGRGPWA*DSAAGR
Trigger: CCTGCCAGCCGCACTGTCCCAGGCCCAGGGACCTCT...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 72 bp CTACCTGGGGGCCTGAACCAACCTGCAGGGGCCTCCTaGCCGGATTTCCTGAGGGCTGTGGTGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGGLNQPAGAS*PDFLRAVVQGR
Trigger: CCTGCCTTGCACCACAGCCCTCAGGAAATCCGGCAAGGAGGCCCCTGCAGGTTGGTTCAGGCCCCCAGGTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGAGACCCCTGCCCTGTaGGCCCTTCTATCCCCACAA +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRETPAL*ALLSPQ
Trigger: TTGTGGGGATAGAAGGGCTCACAGGGCAGGGGTCTC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGTGCTACCTGGGGGCCTaGACCAACCTGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGCYLGA*TNLQGP
Trigger: AGGCCCCTGCAGGTTGGTTCAGGCCCCCAGGTAGCA...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGTGGCCAGCACCACCTaGCCTTTGCTCTTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPVASTT*PLLLSA
Trigger: CGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCAC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCTGCCGGGCCGCGTCCTaGCTAGTCTACCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCCRAAS*LVYRCA
Trigger: GGCGCAGCGGTAGACTAGGCAGGACGCGGCCCGGCA...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGAGGCTCGCCGGATCCTaGATGTGGAAGGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRRLAGS*MWKGAP
Trigger: GGGAGCCCCCTTCCACATCCAGGATCCGGCGAGCCT...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGCAGCTCGCCACCTGCTaGAAGCCCAGGCTACTACGT +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRQLATC*KPRLLR
Trigger: ACGTAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTG...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp TCCCAGCCTGTGCCCAGGGGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCCACCTGGGGAGGGATaGTGTCAAACAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SQPVPRGLKPPLCPTLQSPPGEG*CQTGPQ
Trigger: CTGGGGACCTGTTTGACATCATCCCTCCCCAGGTGG...GGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCCCCTGGGCACAGGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCCCGGCCTGGGGGCACTaGGTTCTAGGTCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCPAWGH*VLGLGA
Trigger: CGCCCCAAGACCTAGAACGCAGTGCCCCCAGGCCGG...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGCGCTGGCGGCCAGTGTaGGGAGAGTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVRWRPV*GESGPA
Trigger: TGCAGGCCCTGACTCTCCGCACACTGGCCGCCAGCG...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGGCAGGCGGCCCCGCTaGCAGCGCACGAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAGRRPR*QRTNSS
Trigger: CGAGGAGTTCGTGCGCTGGCAGCGGGGCCGCCTGCC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGGCCTCACCCATGTGGTaGTTATTGCGGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGASPMW*LLRGSR
Trigger: CCGGGACCCCCGCAATAAGCACCACATGGGTGAGGC...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGCACCAGCCAGAAAGTaGTCGGAGTTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRAPARK*SEFTLA
Trigger: GGCCAGAGTGAACTCCGAGCACTTTCTGGCTGGTGC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGCTAGGGGTCTTTGGTaGCCCCCTCACCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVARGLW*PPHQPA
Trigger: GGCGGGCTGGTGAGGGGGCCACCAAAGACCCCTAGC...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCACAGGACAATCCCTTGTaGTTAGGGGGAGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SHTRPLVSTAPILTPTHAQDNPL*LGGGAG
Trigger: CCCCGCCCCTCCCCCTAACCACAAGGGATTGTCCTG...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGTCACTCTGGCCGGCCTaGCCCATCAAAGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRSLWPA*PIKEPL
Trigger: GAGGGGCTCTTTGATGGGCCAGGCCGGCCAGAGTGA...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGGAGGCTTCTTGCTGGTaGGAGTGTCTCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRREASCW*ECLLLS
Trigger: GGACAGCAAGAGACACTCTCACCAGCAAGAAGCCTC...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGCCTGCATGTCTTCAGTaGGAAGGGGCACACCGGCAC +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRPACLQ*EGAHRH
Trigger: GTGCCGGTGTGCCCCTTCTCACTGAAGACATGCAGG...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGGCCAAGCATGGACGCTaGTGTCAGCCACCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGAKHGR*CQPPGL
Trigger: CAGTCCTGGTGGCTGACATCAGCGTCCATGCTTGGC...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCGGGGAGTCCTTGCGGTaGCGTAGGGGGCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCGESLR*RRGLAV
Trigger: GACAGCAAGCCCCCTACGGCACCGCAAGGACTCCCC...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATAGGAGGGGGAGTCCTTaGGGTGCCGTAGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNRRGSP*GAVGGL
Trigger: CAAGCCCCCTACGGCACCGCAAGGACTCCCCCTCCT...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGTCGCGGTCTTCGTCTaGCCGGCCCCGGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSVAVFV*PAPGAQ
Trigger: CTGAGCCCCCGGGGCCGGGCAGACGAAGACCGCGAC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGTCCCATAGGTGCCTTTaGCCAGCTCCCGGACTAGTT +
Preference number: 4 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRSHRCL*PAPGLV
Trigger: AACTAGTCCGGGAGCTGGGCAAAGGCACCTATGGGA...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGCAGGTCCCCAGCAGGTaGGTACTCCTGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGQVPSR*VLLGKD
Trigger: GTCTTTGCCCAGGAGTACGCACCTGCTGGGGACCTG...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCACCAGCTGCCGCCCGTaGATGAAGTCCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCTSCRP*MKSSAR
Trigger: CCTGGCGCTGGACTTCATGCACGGGCGGCAGCTGGT...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTTCGGACGTGAGCTCGTaGTTGAGGAAGCGGAACACC +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPSDVSS*LRKRNT
Trigger: GGTGTTCCGCTTCCTCAAGCACGAGCTCACGTCCGA...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGTTTCTGTACCCAGGGTaGGGAGGGGGCAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGFLYPG*GGGRMG
Trigger: TCCCATTCTGCCCCCTCCCCACCCTGGGTACAGAAA...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TCCCAGCCTGTGCCCAGGGGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCATTTTCCAAGGGCTTaGCCTCTCCCCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQPVPRGLKPPLCPTLQSHFPRA*PLPSSL
Trigger: GAGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATG...GGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCCCCTGGGCACAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGACAGCCTCACCCATGTaGTGCTTATTGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQTASPM*CLLRGS
Trigger: GGACCCCCGCAATAAGCACCACATGGGTGAGGCTGT...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTAAAGAGCCCCTCAAATaGCCCAGAACCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPKEPLK*PRTPGG
Trigger: CCCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTT...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GGTCCTACGCCCTGCACACTCCAGCGCCAGAAAAGTGGGAGACGTGAGGATGGGAGGGCCCATACCCACTaGGGAGGTGGAGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPTPCTLQRQKSGRREDGRAHTH*GGGVWR
Trigger: TCTCCAGACTCCACCTCCCCAGTGGGTATGGGCCCT...CCCATCCTCACGTCTCCCACTTTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGAGAGGCAGCCCCGATaGGCTCCAGGTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSERQPR*APGGPG
Trigger: CCCCGGCCCACCTGGAGCCCATCGGGGCTGCCTCTC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGTCTGTTCAGTGGGCCTaGTGGAGACCCTCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQSVQWA*WRPSSR
Trigger: TCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGA...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TCCCAGCCTGTGCCCAGGGGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCTGGGGTTCTGTTCAGTaGGCCTGGTGGAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: SQPVPRGLKPPLCPTLQSWGSVQ*AWWRPS
Trigger: AGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCA...GGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCCCCTGGGCACAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTCCACTGGCCACAGTGTaGGCTCAGGGAACATTCTGG +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPPLATV*AQGTFW
Trigger: CCAGAATGTTCCCTGAGCCCACACTGTGGCCAGTGG...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGGGAATTGGGATCCCCTaGTCTAGGGGCGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRGIGIP*SRGVLS
Trigger: GCTCAGAACGCCCCTAGATCAGGGGATCCCAATTCC...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGGAGGTTGGCATGTTTaGCCCCAAGAAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGGGWHV*PQETQE
Trigger: CTCCTGGGTTTCTTGGGGTCAAACATGCCAACCTCC...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGGGTGAGAGTGTCTCTTaGTGTCCCCGGCTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRGESVS*CPRLPR
Trigger: TCTAGGCAGCCGGGGACAGCAAGAGACACTCTCACC...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGACCATGGACCGGGGTaGAAGCGGTGCCGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSDHGPG*KRCRQG
Trigger: CCCCTGGCGGCACCGCTTGCACCCCGGTCCATGGTC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGTGTGTGTTGTGTGGTaGCCTCCGAATTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGVCVVW*PPNSRV
Trigger: GACCCGAGAATTCGGAGGCCACCACACAACACACAC...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGACTGAACGCAAAGGATaGCACCCATGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGTERKG*HPCVCT
Trigger: GGTGCAGACGCATGGGTGCCATCCTTTGCGTTCAGT...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGCTCTGTTTTGCTACCTaGGGGCCTGAACCAACCTGC +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQLCFAT*GPEPTC
Trigger: GCAGGTTGGTTCAGGCCCCCAGGTAGCAAAACAGAG...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGACATTCTGGCAGCCGTaGGGTTCTGTTCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRTFWQP*GSVQWA
Trigger: GGCCCACTGAACAGAACCCCACGGCTGCCAGAATGT...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGCACCACCTGCCCTTTaGTCTTGTCCGCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAAPPAL*SCPRGR
Trigger: ACGGCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGACCGCAGGATGATCTaGCAGGGGGTATGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVDRRMI*QGVWKA
Trigger: GGCCTTCCATACCCCCTGGCAGATCATCCTGCGGTC...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGCTTAAGCCCCCTCTCTaGCCAACACTTCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ERESARERESEHGKGRLLLKPPL*PTLQSL
Trigger: AAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAG...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGCTATTTCTCAGCCAGTaGCAAGCTACCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ERESARERESEHGKGRLLLFLSQ*QATLPP
Trigger: AGGAGGGAGGGTAGCTTGGCACTGGCTGAGAAATAG...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGCCGGATCCTGGATGTaGAAGGGGGCTCCCCGCACT +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAAGSWM*KGAPRT
Trigger: AGTGCGGGGAGCCCCCTTCCACATCCAGGATCCGGC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGCGCTCATCTTCTCCCTaGGCTGGGGCCGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKERSSSP*AGAAGT
Trigger: CGTCCCCGCGGCCCCAGCCCAGGGAGAAGATGAGCG...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCAGGGCCAGTAAGCGCTaGAACATGCGCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEARASKR*NMRSAG
Trigger: GCCCGCGCTGCGCATGTTCCAGCGCTTACTGGCCCT...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCAGATCTCGATGGCCGTaGCCAGCACCACCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCRSRWP*PAPPAL
Trigger: AAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCT...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGCGGCTTGGCTCCTCTaGGCCAAGCCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKEAAWLL*AKPPLT
Trigger: GGTGAGCGGGGGCTTGGCCCAGAGGAGCCAAGCCGC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATAGGCGTCTGGGAGTGTaGCCCGAAAGCTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNRRLGV*PESSLA
Trigger: AGCAAGGGAGCTTTCGGGCCACACTCCCAGACGCCT...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGGTGGGACCGCAGGATaGTCTGCCAGGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAGGTAG*SARGYG
Trigger: TCCATACCCCCTGGCAGATCATCCTGCGGTCCCACC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGTTTTCAAGGTGGGAATaGGTGGGGAGTGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQFSRWE*VGSGEV
Trigger: AACCTCTCCACTCCCCACTCATTCCCACCTTGAAAA...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGAAGGGCGGCAAGACATaGGGGGCTGGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKEKGGKT*GAGALG
Trigger: CCCCAGAGCCCCAGCCCCTCATGTCTTGCCGCCCTT...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TCCCAGCCTGTGCCCAGGGGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTGCTGTCCCCGGCTaGCTAGATTTGGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: SQPVPRGLKPPLCPTLQSLAVPG*LDLGFL
Trigger: TAGAAATCCCAAATCTAGGCAGCCGGGGACAGCAAG...GGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCCCCTGGGCACAGGCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTCCTGATCCCAGCCTGTaGCCAGGGGCCTTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSPDPSL*PGALSP
Trigger: GGGGCTTAAGGCCCCTGGGCACAGGCTGGGATCAGG...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATAACCAGCTCGCCACCTaGTGGAAGCCCAGGCTACTA +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNNQLAT*WKPRLL
Trigger: TAGTAGCCTGGGCTTCCAGCAGGTGGCGAGCTGGTT...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCCTCGCAATCCCGGCCTaGGGGCACTGCGTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEALAIPA*GHCVLG
Trigger: ACCTAGAACGCAGTGCCCCCAGGCCGGGATTGCGAG...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGAGGGCGCCACGACCATaGACCGGGGTGCAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKERAPRP*TGVQAV
Trigger: CACCGCTTGCACCCCGGTCCATGGTCGTGGCGCCCT...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGAGCTACCCTCCCTCCTaGGCTGTGATTTCATTTGTG +
Preference number: 4 (lower is better)
Translates to: HTLAPWCPPPPFSHPHMQSYPPS*AVISFV
Trigger: CACAAATGAAATCACAGCCCAGGAGGGAGGGTAGCT...CTGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGCCCGAAAGCTCCCTTaGTCCTGGCGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAARKLP*SWRVCV
Trigger: CACACACACACGCCAGGAGCAAGGGAGCTTTCGGGC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCGCAGGTCCTACGCCCTaGACACTCCAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEAAGPTP*TLQRQK
Trigger: TTTCTGGCGCTGGAGTGTGCAGGGCGTAGGACCTGC...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGGGCCTGAACCAACCTaGAGGGGCCTCCTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKEGPEPT*RGLLAG
Trigger: TCCGGCAAGGAGGCCCCTGCAGGTTGGTTCAGGCCC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCAGACGCAGATCTCGATaGCCGTGGCCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: KKPRRNFQHEPARHLLEARRRSR*PWPAPP
Trigger: AGGTGGTGCTGGCCACGGCCATCGAGATCTGCGTCT...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGCTCCCTCCTGGGCTGTaGTTTCATTTGTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVLPPGL*FHLCNG
Trigger: CCCATTGCACAAATGAAATCACAGCCCAGGAGGGAG...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGTCGCGGTGCACCAGCTaGCGCCCGTGCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRSRCTS*RPCMKS
Trigger: GGACTTCATGCACGGGCGGCAGCTGGTGCACCGCGA...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCAAAGGATGGCACCCATaGGTCTGCACCCTACACATG +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCKGWHP*VCTLHM
Trigger: CATGTGTAGGGTGCAGACGCATGGGTGCCATCCTTT...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATGTAATGACCGGATCTTaGGAGGGGGTTCTCGCAATC +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNVMTGS*EGVLAI
Trigger: GATTGCGAGAACCCCCTCCCAAGATCCGGTCATTAC...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGGGGCGGCTCAGGCTCTaGGCAGCCCACGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRGRLRL*AAHAHL
Trigger: AAGATGAGCGTGGGCTGCCCAGAGCCTGAGCCGCCC...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGTTCCGGTTCTGCTCTaGGGTCAGGCTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKEVPVLL*GQAGGW
Trigger: CCAGCCTCCAGCCTGACCCCAGAGCAGAACCGGAAC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTACCAGGGCCCCAACCTaGTGTTCCGGTTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSTRAPT*CSGSAL
Trigger: CAGAGCAGAACCGGAACACCAGGTTGGGGCCCTGGT...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGCTCAGAGGGGTCTCTaGGAAGCACCGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSAQRGL*EAPKDR
Trigger: CCTGTCCTTCGGTGCTTCCCAGAGACCCCTCTGAGC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTCAAGACATGAGGGGCTaGGGCTCTGGGGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSQDMRG*GSGART
Trigger: AGTCCTAGCCCCAGAGCCCCAGCCCCTCATGTCTTG...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACGCAGCGCGGGCTCGGTaGAGCGGCGCCACTGCGAAG +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNAARAR*SGATAK
Trigger: CTTCGCAGTGGCGCCGCTTCACCGAGCCCGCGCTGC...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGCCAGGACTGTCCCACTaGCCACAGTGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRPGLSH*PQCGLR
Trigger: CCTGAGCCCACACTGTGGCCAGTGGGACAGTCCTGG...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGGTGGCCTCCGAATTCTCGGGTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCV*CGGLRILGSVR
Trigger: CCGCACAGACCCGAGAATTCGGAGGCCACCACACAACACACACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGAGGAGAGGCTGTTGGTaGTGCTCACCTCCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKERRGCW*CSPPVG
Trigger: TCCTACGGGAGGTGAGCATCACCAACAGCCTCTCCT...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCATCGATTCCTAGTTATTaGAGGAGAGATCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SHTRPLVSTAPILTPTHASIPSY*RRDQDV
Trigger: GACATCCTGATCTCTCCTGCAATAACTAGGAATCGA...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
3UTR CAA 72 bp CCCGCACATACACGCACTTATGCGACATCCAGACATTaGCTACATTTTCCAAGGGCTTGGCCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAHTRTYATSRH*LHFPRAWPLPS
Trigger: GGAGGGGAGAGGCCAAGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCGCATAAGTGCGTGTATGTGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGATCTAGGGGCGTTCTaGGCTGGGTCTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSDLGAF*AGSSCL
Trigger: AAGACAAGAAGACCCAGCTCAGAACGCCCCTAGATC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR TCA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGTGGACGCACAGTCACTaGACGCAAAGGATGGCACCC +
Preference number: 4 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRWTHSH*TQRMAP
Trigger: GGGTGCCATCCTTTGCGTTCAGTGACTGTGCGTCCA...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTTCTTCAGCTTGGTTTTaGTCTTGTTCACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPSSAWF*SCSQTS
Trigger: TGAAGTTTGTGAACAAGAGCAAAACCAAGCTGAAGA...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACGCGCCCTGGGACAGCTaGCTGGGAGGACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNAPWDS*LGGPGC
Trigger: ACACCCTGGTCCTCCCAGGCAGCTGTCCCAGGGCGC...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCATTTCATTTGTGCAATaGGGGTGTGCAGGAGTCACT +
Preference number: 4 (lower is better)
Translates to: VQESLASRGLSRTYTHLCISFVQ*GCAGVT
Trigger: AGTGACTCCTGCACACCCCCATTGCACAAATGAAAT...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAGGTGCAAGGCAGGCCTaGGCGCCCTGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQGARQA*APWDSC
Trigger: GCAGCTGTCCCAGGGCGCCCAGGCCTGCCTTGCACC...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATACATACACGCACTTATaGGACATCCAGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNTYTHL*DIQTFA
Trigger: AGCAAATGTCTGGATGTCGCATAAGTGCGTGTATGT...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCACACACTCGCCCCCTaGTGTCCACCGCCCCCATTC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNHTLAP*CPPPPF
Trigger: GAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAGTGGGGCCAGGCCCTaGGGCCACCCCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNSGARP*GHPTLF
Trigger: AAACAGTGTGGGGTGGCCCCAGGGCCTGGCCCCACT...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGGTTTGCTACTTACCTaGCATGTGGAGGGCCCATAC +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKEGLLLT*HVEGPY
Trigger: GTATGGGCCCTCCACATGCCAGGTAAGTAGCAAACC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAACCTCTAGCCGACCTGTaGCCCCGCCTCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQPLADL*PRLPSR
Trigger: CCTGGATGGGAGGCGGGGCCACAGGTCGGCTAGAGG...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAACTGTGTGGCAAGGGCTaGGAGGACCCGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQLCGKG*EDPAEV
Trigger: GACCTCTGCCGGGTCCTCCCAGCCCTTGCCACACAG...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAAGGGCAGGACACAGCTaGCCTTCGCTCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQRAGHS*PSLTAL
Trigger: CAGGGCAGTGAGCGAAGGGCAGCTGTGTCCTGCCCT...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCAACCTTCCCATAGGTaGCTTTGCCCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNQPSHR*LCPAPG
Trigger: TCCGGGAGCTGGGCAAAGGCACCTATGGGAAGGTTG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACTCTCACACCCACACATaGAGGTCCTACGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNSHTHT*RSYALH
Trigger: GTGCAGGGCGTAGGACCTGCATGTGTGGGTGTGAGA...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGTCTTGTCTTGAGGTGTaGAGTTGTAATGACCGGATC +
Preference number: 4 (lower is better)
Translates to: AGETPEQDLNREREREKESCLEV*SCNDRI
Trigger: GATCCGGTCATTACAACTCCACACCTCAAGACAAGA...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAGCTCGGAGTTCACTCTaGCCGGCCTGGCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQARSSL*PAWPIK
Trigger: TTTGATGGGCCAGGCCGGCCAGAGTGAACTCCGAGC...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAGCCCTGAGCCAAGCATaGACGCTGATGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQALSQA*TLMSAT
Trigger: GGTGGCTGACATCAGCGTCCATGCTTGGCTCAGGGC...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTGGAAGTTCTTCAGCTTaGTTTTGCTCTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSGSSSA*FCSCSQ
Trigger: TTGTGAACAAGAGCAAAACCAAGCTGAAGAACTTCC...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAATCAGGGAGCCCCACCTaGGGAGGGATGATGTCAAAC +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQSGSPT*GGMMSN
Trigger: GTTTGACATCATCCCTCCCCAGGTGGGGCTCCCTGA...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAATGGCACCCATGCGTCTaGACCCTACACATGTGCACA +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQWHPCV*TLHMCT
Trigger: TGTGCACATGTGTAGGGTGCAGACGCATGGGTGCCA...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAATACTTACCTGGCATGTaGAGGGCCCATACCCACTGG +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQYLPGM*RAHTHW
Trigger: CCAGTGGGTATGGGCCCTCCACATGCCAGGTAAGTA...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAGCTCAGGGAACATTCTaGCAGCCGTGGGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQAQGTF*QPWGSV
Trigger: AACAGAACCCCACGGCTGCCAGAATGTTCCCTGAGC...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAATCTATGTACCGGAGTTaGGGGGAATTGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQSMYRS*GELGSP
Trigger: AGGGGATCCCAATTCCCCCCAACTCCGGTACATAGA...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAAGATACTACAACGGCTaGGGAAACTCCCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQRYYNG*GNSRTG
Trigger: TCCTGTTCGGGAGTTTCCCCAGCCGTTGTAGTATCT...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCTCAGGGCCAAAGGATaGCAGAGTATTTACAAACAC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNLRAKG*QSIYKH
Trigger: GTGTTTGTAAATACTCTGGCATCCTTTGGCCCTGAG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAAGTATTTACAAACACATaGAGGAAGGGCGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQVFTNT*RKGGKT
Trigger: TGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATAC...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR GCA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAACGACATCCAGACATTTaGTACATTTTCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQRHPDI*YIFQGL
Trigger: AAGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCG...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS GCA 90 bp GTGAAGCGGCGCCACTGCGAAGGCAGCCCCGGCAGGCGGCCCCGCTaGCAGCGCACGAACTCCTCGAAGAAGGCGTCGGCGCCCGACGCC +
Preference number: 5 (lower is better)
Translates to: VKRRHCEGSPGRRPR*QRTNSSKKASAPDA
Trigger: GGCGTCGGGCGCCGACGCCTTCTTCGAGGAGTTCGTGCGCTGGCAGCGGGGCCGCCTGCCGGGGCTGCCTTCGCAGTGGCGCCGCTTCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS TCA 90 bp GCTCCAGGGCCAGTAAGCGCTGGAACATGCGCAGCGCGGGCTCGGTaGAGCGGCGCCACTGCGAAGGCAGCCCCGGCAGGCGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: APGPVSAGTCAARAR*SGATAKAAPAGGPA
Trigger: AGCGGGGCCGCCTGCCGGGGCTGCCTTCGCAGTGGCGCCGCTTCACCGAGCCCGCGCTGCGCATGTTCCAGCGCTTACTGGCCCTGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 90 bp AAGCGCTGGAACATGCGCAGCGCGGGCTCGGTGAAGCGGCGCCACTaGGAAGGCAGCCCCGGCAGGCGGCCCCGCTGCCAGCGCACGAAC +
Preference number: 5 (lower is better)
Translates to: KRWNMRSAGSVKRRH*EGSPGRRPRCQRTN
Trigger: GTTCGTGCGCTGGCAGCGGGGCCGCCTGCCGGGGCTGCCTTCGCAGTGGCGCCGCTTCACCGAGCCCGCGCTGCGCATGTTCCAGCGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 90 bp TCCTTGGCTGGGCCGCGGCGCTCGGGCTCCAGGGCCAGTAAGCGCTaGAACATGCGCAGCGCGGGCTCGGTGAAGCGGCGCCACTGCGAA +
Preference number: 5 (lower is better)
Translates to: SLAGPRRSGSRASKR*NMRSAGSVKRRHCE
Trigger: TTCGCAGTGGCGCCGCTTCACCGAGCCCGCGCTGCGCATGTTCCAGCGCTTACTGGCCCTGGAGCCCGAGCGCCGCGGCCCAGCCAAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS TCA 90 bp GGCACACCTCAGGCGCCGTGTAAGGGATGGTGCCGCTCACGCGCTTaGCGCGGCAGCCCACGCGGCGCGTCATGCCGAAGTCGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GTPQAPCKGWCRSRA*RGSPRGASCRSRPA
Trigger: AGCTGGCCGACTTCGGCATGACGCGCCGCGTGGGCTGCCGCGTCAAGCGCGTGAGCGGCACCATCCCTTACACGGCGCCTGAGGTGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 90 bp GTCCGAGGGCGGCGGAGGCGACTCAGACGCAGATCTCGATGGCCGTaGCCAGCACCACCTGCCCTTTGCTCTTGTCCGCGCGGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: VRGRRRRLRRRSRWP*PAPPALCSCPRGRR
Trigger: CCGACGGCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCTGCGTCTGAGTCGCCTCCGCCGCCCTCGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CCA 90 bp TCCCGGGTCCGAGGGCGGCGGAGGCGACTCAGACGCAGATCTCGATaGCCGTGGCCAGCACCACCTGCCCTTTGCTCTTGTCCGCGCGGC +
Preference number: 5 (lower is better)
Translates to: SRVRGRRRRLRRRSR*PWPAPPALCSCPRG
Trigger: GCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCTGCGTCTGAGTCGCCTCCGCCGCCCTCGGACCCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp TGGCAGCCGTGGGGTTCTGTTCAGTGGGCCTGGTGGAGACCCTCTAGCCGACCTGTGCCGCTCACGCGCTaGACGCGGCAGCCCACGCGG +
Preference number: 5 (lower is better)
Translates to: WQPWGSVQWAWWRPSSRPVPLTR*TRQPTR
Trigger: CCGCGTGGGCTGCCGCGTCAAGCGCGTGAGCGGCAC...AGGTCGGCTAGAGGGTCTCCACCAGGCCCACTGAACAGAACCCCACGGCTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS GCA 90 bp ACCAGCTGCCGCCCGTGCATGAAGTCCAGCGCCAGGCCCAGCTGCTaGACACAGCGCTTCACCGTGTCCTCAGGGAGCCCCACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TSCRPCMKSSARPSC*TQRFTVSSGSPTWG
Trigger: TCCCCAGGTGGGGCTCCCTGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGCGCTGGACTTCATGCACGGGCGGCAGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 90 bp TGCACCAGCTGCCGCCCGTGCATGAAGTCCAGCGCCAGGCCCAGCTaGTGCACACAGCGCTTCACCGTGTCCTCAGGGAGCCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: CTSCRPCMKSSARPS*CTQRFTVSSGSPTW
Trigger: CCAGGTGGGGCTCCCTGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGCGCTGGACTTCATGCACGGGCGGCAGCTGGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS-3UTR CAA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGGTCAGCACCGTCCGCTaGAGCGGCCCAGGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRVSTVR*SGPGAS
Trigger: CGAGGCGCCTGGGCCGCTCAAGCGGACGGTGCTGAC...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGAGCACCACCTGCCCTTaGCTCTTGTCCGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRSTTCP*LLSARP
Trigger: CGGCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGCT...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CGAGGTGGCTCCATTCCCTACCGCCGCACCGGGCACCGGCTCGGGGCGGGCCCGAGGAAGTTCTTCAGCTaGGTTTTGCTCTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: RGGSIPYRRTGHRLGAGPRKFFS*VLLLFT
Trigger: TGTGAACAAGAGCAAAACCAAGCTGAAGAACTTCCT...CGGGCCCGCCCCGAGCCGGTGCCCGGTGCGGCGGTAGGGAATGGAGCCACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATACCTGCCCTTTGCTCTaGTCCGCGCGGCCGTCGGTC +
Preference number: 5 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNTCPLL*SARPSV
Trigger: GACCGACGGCCGCGCGGACAAGAGCAAAGGGCAGGT...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGCCTGCAGGGGCCTCCTaGCCGGATTTCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVPAGAS*PDFLRA
Trigger: AGCCCTCAGGAAATCCGGCAAGGAGGCCCCTGCAGG...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATGGCCCGAAAGCTCCCTaGCTCCTGGCGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNGPKAP*LLACVC
Trigger: ACACACACACGCCAGGAGCAAGGGAGCTTTCGGGCC...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp TCACACACTCGCCCCCTGGTGTCCACCGCCCCCATTCTCACACCCACACATGCAGATCCCCGAGGCTTCTaGCTGGTGAGAGTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SHTRPLVSTAPILTPTHADPRGF*LVRVSL
Trigger: AAGAGACACTCTCACCAGCAAGAAGCCTCGGGGATC...TGCATGTGTGGGTGTGAGAATGGGGGCGGTGGACACCAGGGGGCGAGTGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GAGAGAGAGAGCGCGCGCGAGAGAGAGAGCGAGCACGGCAAGGGACGTCTACTGACCACGTCAAAGACCTaGATGATGAAGGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ERESARERESEHGKGRLLTTSKT*MMKGLE
Trigger: CTCCAGCCCCTTCATCATCAAGGTCTTTGACGTGGT...CAGTAGACGTCCCTTGCCGTGCTCGCTCTCTCTCTCGCGCGCGCTCTCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GTGCAGGAGTCACTAGCTTCTCGGGGCCTGTCCCGCACATACACGCACTTATGCGACGTGAGCTCGTGCTaGAGGAAGCGGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: VQESLASRGLSRTYTHLCDVSSC*RKRNTS
Trigger: GGAGGTGTTCCGCTTCCTCAAGCACGAGCTCACGTC...GCATAAGTGCGTGTATGTGCGGGACAGGCCCCGAGAAGCTAGTGACTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGGAGGAGGGGGAGTCCTaGCGGTGCCGTAGGGGGCTT +
Preference number: 5 (lower is better)
Translates to: AGETPEQDLNREREREKEEEGES*RCRRGL
Trigger: AAGCCCCCTACGGCACCGCAAGGACTCCCCCTCCTC...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CTGGCCGGCCTGGCCCATCAAAGAGCCCCTCAAATGGCCCAGAACCCCAGGAGGCTGGGTCTTCTTGTCTaGAGGTGTGGAGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: LAGLAHQRAPQMAQNPRRLGLLV*RCGVVM
Trigger: CATTACAACTCCACACCTCAAGACAAGAAGACCCAG...CCTCCTGGGGTTCTGGGCCATTTGAGGGGCTCTTTGATGGGCCAGGCCGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGAGGGAGTGGGGGTTaGCTACTTACCTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVGGSGG*LLTWHV
Trigger: CACATGCCAGGTAAGTAGCAAACCCCCACTCCCTCC...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CCA 90 bp CTGGGTCTTCTTGTCTTGAGGTGTGGAGTTGTAATGACCGGATCTTaGGAGGGGGTTCTCGCAATCCCGGCCTGGGGGCACTGCGTTCTA +
Preference number: 5 (lower is better)
Translates to: LGLLVLRCGVVMTGS*EGVLAIPAWGHCVL
Trigger: TAGAACGCAGTGCCCCCAGGCCGGGATTGCGAGAACCCCCTCCCAAGATCCGGTCATTACAACTCCACACCTCAAGACAAGAAGACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCGACATCCAGACATTaGCTACATTTTCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: APSLPNTSVPFCTQGGEGATSRH*LHFPRA
Trigger: AGCCCTTGGAAAATGTAGCAAATGTCTGGATGTCGC...CCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGGGGAGGGGGCAGAATGCTGTTGTCTCTGTTTaGCTACCTGGGGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LCPTLQSLSVPRVGRGQNAVVSV*LPGGLN
Trigger: GTTCAGGCCCCCAGGTAGCAAAACAGAGACAACAGC...ATTCTGCCCCCTCCCCACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp AAGAAACCCAGGAGAAATTTCCAGCACGAACCAGCTCGCCACCTGCTGGAAGCCACATTTTCCAAGGGCTaGGCCTCTCCCCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: KKPRRNFQHEPARHLLEATFSKG*ASPLQP
Trigger: AGGCTGGAGGGGAGAGGCCAAGCCCTTGGAAAATGT...GGCTTCCAGCAGGTGGCGAGCTGGTTCGTGCTGGAAATTTCTCCTGGGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGTGTCAGGACAATCCCTaGTGGTTAGGGGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRCQDNP*WLGGGA
Trigger: CGCCCCTCCCCCTAACCACAAGGGATTGTCCTGACA...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGTTCTATCCCCACAAGTaGTCAGGACAATCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVFYPHK*SGQSLV
Trigger: CACAAGGGATTGTCCTGACAACTTGTGGGGATAGAA...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GCTGGGGAAACTCCCGAACAGGATCTTAACAGAGAGAGGGAGAGAGAGAAAGAGCAGGCGGGGCTGCTGTaGTCTCTGTTTTGCTACCTG +
Preference number: 5 (lower is better)
Translates to: AGETPEQDLNREREREKEQAGLL*SLFCYL
Trigger: CAGGTAGCAAAACAGAGACAACAGCAGCCCCGCCTG...CTCTTTCTCTCTCTCCCTCTCTCTGTTAAGATCCTGTTCGGGAGTTTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp AGTATTTACAAACACATGGAGGAAGGGCGGCAAGACATGAGGGGCTGGGGCTCTCCCGGCTGCCTAGATTaGGGATTTCTATGTACCGGA +
Preference number: 5 (lower is better)
Translates to: SIYKHMEEGRQDMRGWGSPGCLD*GFLCTG
Trigger: TCCGGTACATAGAAATCCCAAATCTAGGCAGCCGGG...AGAGCCCCAGCCCCTCATGTCTTGCCGCCCTTCCTCCATGTGTTTGTAAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GGCCTTAAGCCCCCTCTCTGCCCAACACTTCAGTCCCTTTCTGTACCCAGGGTGAGCTTGGTTTTGCTCTaGTTCACAAACTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GLKPPLCPTLQSLSVPRVSLVLL*FTNFSA
Trigger: GGCACTGAAGTTTGTGAACAAGAGCAAAACCAAGCT...CACCCTGGGTACAGAAAGGGACTGAAGTGTTGGGCAGAGAGGGGGCTTAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp ACCTGCTGGAAGCCCAGGCTACTACGTCTAGGCTGTGTGGCAAGGGCTGGGAGGTTCTTCAGCTTGGTTTaGCTCTTGTTCACAAACTTC +
Preference number: 5 (lower is better)
Translates to: TCWKPRLLRLGCVARAGRFFSLV*LLFTNF
Trigger: GAAGTTTGTGAACAAGAGCAAAACCAAGCTGAAGAA...CCTCCCAGCCCTTGCCACACAGCCTAGACGTAGTAGCCTGGGCTTCCAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAACCCATGTGGTGCTTATaGCGGGGGTCCCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQPMWCL*RGSRAS
Trigger: GGAGGCCCGGGACCCCCGCAATAAGCACCACATGGG...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CACACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACCTGGAGGAGAGGCTGTaGGTGATGCTCACCTCCCGT +
Preference number: 5 (lower is better)
Translates to: HTYTHTHIHTVPSQKNRNLEERL*VMLTSR
Trigger: ACGGGAGGTGAGCATCACCAACAGCCTCTCCTCCAG...GTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp GAATCTCGATTCCTAGTTATTGCAGGAGAGATCAGGATGTCGCGAGGCCTAAGGACTTCAGTGCCATTTTaGTGCCTGTGCCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: ESRFLVIAGEIRMSRGLRTSVPF*CLCPCR
Trigger: TCTACAAGGGCACAGGCACAAAAATGGCACTGAAGT...CCTTAGGCCTCGCGACATCCTGATCTCTCCTGCAATAACTAGGAATCGAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS-3UTR CAA 90 bp CACATACACACATACACACATACACACTGTACCTTCACAGAAGAATCGCAACAATGGGGAGTGGAGAGGTaGGGGCACCAGCCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: HIHTYTHTHCTFTEESQQWGVER*GHQPES
Trigger: ACTTTCTGGCTGGTGCCCCAACCTCTCCACTCCCCA...TTGTTGCGATTCTTCTGTGAAGGTACAGTGTGTATGTGTGTATGTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CAA 72 bp CGGGAGCCGCTGCCGCTCTCGGTCAGCACCGTCCGCTaGAGCGGCCCAGGCGCCTCGAGGCGCAGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: REPLPLSVSTVR*SGPGASRRSGP
Trigger: CGGGCCACTGCGCCTCGAGGCGCCTGGGCCGCTCAAGCGGACGGTGCTGACCGAGAGCGGCAGCGGCTCCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 72 bp GGGCCGCGGCGCTCGGGCTCCAGGGCCAGTAAGCGCTaGAACATGCGCAGCGCGGGCTCGGTGAAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: GPRRSGSRASKR*NMRSAGSVKRR
Trigger: GCGCCGCTTCACCGAGCCCGCGCTGCGCATGTTCCAGCGCTTACTGGCCCTGGAGCCCGAGCGCCGCGGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 72 bp TGGCCAGGGGTGGCCTCCGCAGCATCATCGCCAGCCTaGGCAGGAGTCCCCGAGCCAGGGCGCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: WPGVASAASSPA*AGVPEPGRSRV
Trigger: GACCCTGGAGCGCCCTGGCTCGGGGACTCCTGCCCAGGCTGGCGATGATGCTGCGGAGGCCACCCCTGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671413.3
CDS TCA 72 bp CCAGTAAGCGCTGGAACATGCGCAGCGCGGGCTCGGTaGAGCGGCGCCACTGCGAAGGCAGCCCCGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PVSAGTCAARAR*SGATAKAAPAG
Trigger: GCCTGCCGGGGCTGCCTTCGCAGTGGCGCCGCTTCACCGAGCCCGCGCTGCGCATGTTCCAGCGCTTACTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp AGATCTCGATGGCCGTGGCCAGCACCACCTGCCCTTTaGTCTTGTCCGCGCGGCCGTCGGTCCGGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: RSRWPWPAPPAL*SCPRGRRSGRG
Trigger: CCCCCGGCCGGACCGACGGCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS TCA 72 bp CAGGCGCCGTGTAAGGGATGGTGCCGCTCACGCGCTTaGCGCGGCAGCCCACGCGGCGCGTCATGCCGAAGT +
Preference number: 6 (lower is better)
Translates to: QAPCKGWCRSRA*RGSPRGASCRS
Trigger: ACTTCGGCATGACGCGCCGCGTGGGCTGCCGCGTCAAGCGCGTGAGCGGCACCATCCCTTACACGGCGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp TGCGAGGGCCGGCGGCGCAGCTCGGACGTGAGCTCGTaGTTGAGGAAGCGGAACACCTCCTTGGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: CEGRRRSSDVSS*LRKRNTSLAGP
Trigger: CGGCCCAGCCAAGGAGGTGTTCCGCTTCCTCAAGCACGAGCTCACGTCCGAGCTGCGCCGCCGGCCCTCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp CGCCCGTGCATGAAGTCCAGCGCCAGGCCCAGCTGCTaGACACAGCGCTTCACCGTGTCCTCAGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: RPCMKSSARPSC*TQRFTVSSGSP
Trigger: GGGGCTCCCTGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGCGCTGGACTTCATGCACGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp CAGACGCAGATCTCGATGGCCGTGGCCAGCACCACCTaGCCTTTGCTCTTGTCCGCGCGGCCGTCGGTCCGG +
Preference number: 6 (lower is better)
Translates to: QTQISMAVASTT*PLLLSARPSVR
Trigger: CCGGACCGACGGCCGCGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCTGCGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp TGCCGCCCGTGCATGAAGTCCAGCGCCAGGCCCAGCTaGTGCACACAGCGCTTCACCGTGTCCTCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: CRPCMKSSARPS*CTQRFTVSSGS
Trigger: GCTCCCTGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGCCTGGCGCTGGACTTCATGCACGGGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 72 bp CGGCGGAGGCGACTCAGACGCAGATCTCGATGGCCGTaGCCAGCACCACCTGCCCTTTGCTCTTGTCCGCGC +
Preference number: 6 (lower is better)
Translates to: RRRRLRRRSRWP*PAPPALCSCPR
Trigger: GCGCGGACAAGAGCAAAGGGCAGGTGGTGCTGGCCACGGCCATCGAGATCTGCGTCTGAGTCGCCTCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS TCA 72 bp CTTTGCCCAGCTCCCGGACTAGTTCGTAGTGCTTGGTaGCGTCGCTGGCGGCCAGTGTGCGGAGAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LCPAPGLVRSAW*RRWRPVCGESG
Trigger: CCCTGACTCTCCGCACACTGGCCGCCAGCGACGTCACCAAGCACTACGAACTAGTCCGGGAGCTGGGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CCA 72 bp CTTGTCTTGAGGTGTGGAGTTGTAATGACCGGATCTTaGGAGGGGGTTCTCGCAATCCCGGCCTGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LVLRCGVVMTGS*EGVLAIPAWGH
Trigger: GTGCCCCCAGGCCGGGATTGCGAGAACCCCCTCCCAAGATCCGGTCATTACAACTCCACACCTCAAGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CAA 90 bp GCTGGGTCTTCTTGTCTTGAGGTGTGGAGTTGTAATGACCGGATCTaGGGAGGGGGTTCTCGCAATCCCGGCCTGGGGGCACTGCGTTCT +
Preference number: 6 (lower is better)
Translates to: AGSSCLEVWSCNDRI*GGGSRNPGLGALRS
Trigger: AGAACGCAGTGCCCCCAGGCCGGGATTGCGAGAACCCCCTCCCAAGATCCGGTCATTACAACTCCACACCTCAAGACAAGAAGACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS GCA 72 bp CTGGGGAGGGATGATGTCAAACAGGTCCCCAGCAGGTaGGTACTCCTGGGCAAAGACGTAGCAGTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LGRDDVKQVPSR*VLLGKDVAVLC
Trigger: ACAGAGGACTGCTACGTCTTTGCCCAGGAGTACGCACCTGCTGGGGACCTGTTTGACATCATCCCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CAA 72 bp CTGAGGAGGGGGAGTCCTTGCGGTGCCGTAGGGGGCTaGCTGTCTTCTAAATACCGAGGAAGTCTCCGCTTT +
Preference number: 6 (lower is better)
Translates to: LRRGSPCGAVGG*LSSKYRGSLRF
Trigger: AAAGCGGAGACTTCCTCGGTATTTAGAAGACAGCAAGCCCCCTACGGCACCGCAAGGACTCCCCCTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CAA 72 bp TCTTGTCTTGAGGTGTGGAGTTGTAATGACCGGATCTaGGGAGGGGGTTCTCGCAATCCCGGCCTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: SCLEVWSCNDRI*GGGSRNPGLGA
Trigger: TGCCCCCAGGCCGGGATTGCGAGAACCCCCTCCCAAGATCCGGTCATTACAACTCCACACCTCAAGACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS GCA 72 bp TGCCCTTGTAGACCACCAGGTCAACCTTCCCATAGGTaGCTTTGCCCAGCTCCCGGACTAGTTCGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: CPCRPPGQPSHR*LCPAPGLVRSA
Trigger: AGCACTACGAACTAGTCCGGGAGCTGGGCAAAGGCACCTATGGGAAGGTTGACCTGGTGGTCTACAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS GCA 72 bp GGATCCCCGAGGCTTCTTGCTGGTGAGAGTGTCTCTTaGTGTCCCCGGCTGCCTAGATTTGGGATTTCTATG +
Preference number: 6 (lower is better)
Translates to: GSPRLLAGESVS*CPRLPRFGISM
Trigger: CATAGAAATCCCAAATCTAGGCAGCCGGGGACAGCAAGAGACACTCTCACCAGCAAGAAGCCTCGGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS GCA 72 bp TTCTTGCTGGTGAGAGTGTCTCTTGCTGTCCCCGGCTaGCTAGATTTGGGATTTCTATGTACCGGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: FLLVRVSLAVPG*LDLGFLCTGVG
Trigger: CCCAACTCCGGTACATAGAAATCCCAAATCTAGGCAGCCGGGGACAGCAAGAGACACTCTCACCAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341901.5
CDS CAA 90 bp ACCACGTCAAAGACCTTGATGATGAAGGGGCTGGAGGAGAGGCTGTaGGTGATGCTCACCTCCCGTAGGAAGTTCTTCAGCTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: TTSKTLMMKGLEERL*VMLTSRRKFFSLVL
Trigger: CAAAACCAAGCTGAAGAACTTCCTACGGGAGGTGAGCATCACCAACAGCCTCTCCTCCAGCCCCTTCATCATCAAGGTCTTTGACGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3
CDS CAA 72 bp ATGCTCACCTCCCGTAGGAAGTTCTTCAGCTTGGTTTaGCTCTTGTTCACAAACTTCAGTGCCATTTTTGTG +
Preference number: 6 (lower is better)
Translates to: MLTSRRKFFSLV*LLFTNFSAIFV
Trigger: CACAAAAATGGCACTGAAGTTTGTGAACAAGAGCAAAACCAAGCTGAAGAACTTCCTACGGGAGGTGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341901.5
ENST00000671413.3