Pregenerated sensors for SAXO2 (Homo sapiens)
Ensembl gene IDs: ENSG00000188659Ensembl transcript IDs: ENST00000339465.5, ENST00000562097.5, ENST00000565006.1, ENST00000565432.1, ENST00000565501.1, ENST00000566205.1, ENST00000566861.5, ENST00000682753.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAGGCAGGAGGATCACTTaGGCTCAGGAGGCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RLNSLTNTARTCLYKVCLGRRIT*AQEAEA Trigger: AGCCTCAGCCTCCTGAGCTCAAGTGATCCTCCTGCC...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| 3UTR-3UTR GCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTACACAGAGCCTTTCCTTaGCACACCACAGTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RLNSLTNTARTCLYKVCLHRAFP*HTTVPL Trigger: AAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCTGTG...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| 3UTR-3UTR CCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAAAAAATAGCCAGGTGTaGTGGCACACCCTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: RLNSLTNTARTCLYKVCLKNSQV*WHTLVV Trigger: GACTACAAGGGTGTGCCACCACACCTGGCTATTTTT...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACTTCTTTCCTAAGCCATaGAGGCTAAGTTTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDFFPKP*RLSLAA Trigger: TGCTGCCAAACTTAGCCTCCATGGCTTAGGAAAGAA...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| 3UTR GCA 72 bp | CAAGTCCTTCGATTCCCAGCACACAGAGCCTTTCCTTaGCACACCACAGTGCCTCTTGCTAACTTGAACATG | + |
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Preference number: 3 (lower is better) Translates to: QVLRFPAHRAFP*HTTVPLANLNM Trigger: CATGTTCAAGTTAGCAAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCTGTGTGCTGGGAATCGAAGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| 3UTR-3UTR CAA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACCCATGGAGGCTAAGTTaGGCAGCACACCAAAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDPWRLS*AAHQSY Trigger: ATAACTTTGGTGTGCTGCCAAACTTAGCCTCCATGG...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR GCA 90 bp | AGAGCCTTTCCTTGCCACACCACAGTGCCTCTTGCTAACTTGAACATGGTGAGGCACAGAGCCTTTCCTTaGCACACCACAGTGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RAFPCHTTVPLANLNMVRHRAFP*HTTVPL Trigger: AAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCTGTG...CCTCACCATGTTCAAGTTAGCAAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTTTATGGCAGAGGCAGTaGCTCCCTTGTCAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TALLQFSDYGRGSGSLVSLWQRQ*LPCQSW Trigger: CCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAA...ACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CCA 90 bp | CTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTCCTGGTAGCTCCTCATACTCTTaGCTCCCATGCTTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLQFSDYGRGSGSLVSPGSSSYS*LPCFPP Trigger: TGGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCT...ACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CCA 90 bp | CTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTCCTGGTCTCCCTTGTCAGTCCTaGTTGACTTTTCAGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLQFSDYGRGSGSLVSPGLPCQS*LTFQSG Trigger: GCCTGACTGAAAAGTCAACCAGGACTGACAAGGGAG...ACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTCTTGTCAGTCCTGGTTaGCTTTTCAGTCAGGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: TALLQFSDYGRGSGSLVSLVSPG*LFSQAD Trigger: ATCCGCCTGACTGAAAAGTCAACCAGGACTGACAAG...ACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR TCA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACGTTCCACGTGGACAATaGTGTCGCCTGGCCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDVPRGQ*CRLARV Trigger: CACCCGGGCCAGGCGACATCATTGTCCACGTGGAAC...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR TCA 90 bp | TGGAGTCTACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTCTGTTGCAATTTTCTaGTTATGGCAGAGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: WSLQLCCNFLIMAEAVAPSVAIF*LWQRQW Trigger: CCACTGCCTCTGCCATAATCAGAAAATTGCAACAGA...GGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGTAGACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CCA 90 bp | AGAGCCTTTCCTTGCCACACCACAGTGCCTCTTGCTAACTTGAACATGGTGAGGTGGTTTATATTCTTCTaGCACATGGCGAGGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RAFPCHTTVPLANLNMVRWFIFF*HMARLF Trigger: AAACAGCCTCGCCATGTGCCAGAAGAATATAAACCA...CCTCACCATGTTCAAGTTAGCAAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR GCA 90 bp | TGGAGTCTACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCAGTCTACAGCTCTGTTaGAATTTTCTGATTATGGCA | + |
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Preference number: 4 (lower is better) Translates to: WSLQLCCNFLIMAEAVAPSLQLC*NFLIMA Trigger: TGCCATAATCAGAAAATTGCAACAGAGCTGTAGACT...GGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGTAGACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CCA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACGACAATGATGTCGCCTaGCCCGGGTGGCATTTTACT | + |
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Preference number: 4 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDDNDVA*PGWHFT Trigger: AGTAAAATGCCACCCGGGCCAGGCGACATCATTGTC...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAAGCTCCTCATACTCTTaGCTCCCATGCTTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLSSSYS*LPCFPP Trigger: TGGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCT...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAGTAATCCCAGTGCTTTaGGAAGCCAAGGTGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLVIPVL*EAKVGF Trigger: GAATCCCACCTTGGCTTCCCAAAGCACTGGGATTAC...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR GCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTACAAAGGCCGGACTATTaGCACAGGCTGCACTTTATA | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLQRPDY*HRLHFI Trigger: TATAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTG...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAAAGCTCCTCATACTCTTaGCTCCCATGCTTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQSSSYS*LPCFPP Trigger: TGGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCT...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR GCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAACAAAGGCCGGACTATTaGCACAGGCTGCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQQRPDY*HRLHFI Trigger: TATAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTG...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CCA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACGTTACCTTTATAGGTTaGGACAGTGTCCAATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDVTFIG*DSVQFS Trigger: GGAAAATTGGACACTGTCCCAACCTATAAAGGTAAC...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTATATTCTTCTGGCACATaGCGAGGCTGTTTAACTATT | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLYSSGT*RGCLTI Trigger: AATAGTTAAACAGCCTCGCCATGTGCCAGAAGAATA...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATGGTTTATATTCTTCTaGCACATGGCGAGGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQWFIFF*HMARLF Trigger: AAACAGCCTCGCCATGTGCCAGAAGAATATAAACCA...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAATCGTCTTTATAGGTTaGGACAGTGTCCAATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLIVFIG*DSVQFS Trigger: GGAAAATTGGACACTGTCCCAACCTATAAAGACGAT...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR TCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTATTATTAGTCAGAACTTaGACTCAAGTCCTTCGATTC | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLLLVRT*TQVLRF Trigger: GAATCGAAGGACTTGAGTTCAAGTTCTGACTAATAA...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR TCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATGGCTCCTTCATGTATaGAACAGCAAGTTACCTTTA | + |
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Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQWLLHV*NSKLPL Trigger: TAAAGGTAACTTGCTGTTTCATACATGAAGGAGCCA...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR GCA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAACTATTGCCACAGGCTaGACTTTATACGAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: RLNSLTNTARTCLYKVCLTIATG*TLYEFK Trigger: TTTGAATTCGTATAAAGTGCAGCCTGTGGCAATAGT...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATATTCTTCTGGCACATaGCGAGGCTGTTTAACTATT | + |
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Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQYSSGT*RGCLTI Trigger: AATAGTTAAACAGCCTCGCCATGTGCCAGAAGAATA...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAAATTTGGATGGGATTGTaGGTCTTTTACCACTCAATC | + |
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Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQIWMGL*VFYHSI Trigger: GATTGAGTGGTAAAAGACCCACAATCCCATCCAAAT...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR GCA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAAACTATTGCCACAGGCTaGACTTTATACGAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQTIATG*TLYEFK Trigger: TTTGAATTCGTATAAAGTGCAGCCTGTGGCAATAGT...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCCAGCTCCTCATACTCTaGGCTCCCATGCTTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: WSLQLCCNFLIMAEAVAPQLLIL*APMLSS Trigger: GGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCTG...GGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGTAGACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CAA 90 bp | AGAGCCTTTCCTTGCCACACCACAGTGCCTCTTGCTAACTTGAACATGGTGAGGGAACTTAAACTCAGGTaGGGTATAGTGGCTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: RAFPCHTTVPLANLNMVRELKLR*GIVAHA Trigger: GGCATGAGCCACTATACCCAACCTGAGTTTAAGTTC...CCTCACCATGTTCAAGTTAGCAAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTCCTTGTCAGTCCTGGTaGACTTTTCAGTCAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: TALLQFSDYGRGSGSLVSPCQSW*TFQSGG Trigger: TCCGCCTGACTGAAAAGTCAACCAGGACTGACAAGG...ACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAGAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CAA 90 bp | AGAGCCTTTCCTTGCCACACCACAGTGCCTCTTGCTAACTTGAACATGGTGAGGAATCGTCTTTATAGGTaGGGACAGTGTCCAATTTTC | + |
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Preference number: 5 (lower is better) Translates to: RAFPCHTTVPLANLNMVRNRLYR*GQCPIF Trigger: GAAAATTGGACACTGTCCCAACCTATAAAGACGATT...CCTCACCATGTTCAAGTTAGCAAGAGGCACTGTGGTGTGGCAAGGAAAGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CAA 90 bp | CTGTTGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTTGTCAGTCCTGGTGAGTCTACAGCTCTGTaGCAATTTTCTGATTATGGC | + |
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Preference number: 5 (lower is better) Translates to: LLQFSDYGRGSGSLVSPGESTAL*QFSDYG Trigger: GCCATAATCAGAAAATTGCAACAGAGCTGTAGACTC...ACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566861.5 |
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| CDS-3UTR CAA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTACAGCTCCTCATACTCTaGGCTCCCATGCTTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RLNSLTNTARTCLYKVCLQLLIL*APMLSS Trigger: GGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCTG...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CAA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTAACACAGAGCCTTTCCTaGCCACACCACAGTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RLNSLTNTARTCLYKVCLTQSLS*PHHSAS Trigger: AGAGGCACTGTGGTGTGGCAAGGAAAGGCTCTGTGT...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAACAGCTCCTCATACTCTaGGCTCCCATGCTTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQQLLIL*APMLSS Trigger: GGAGGAAAGCATGGGAGCCAAGAGTATGAGGAGCTG...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTACCAAAGGCCGGACTATaGCCACAGGCTGCACTTTAT | + |
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Preference number: 5 (lower is better) Translates to: RLNSLTNTARTCLYKVCLPKAGL*PQAALY Trigger: ATAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTGG...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAACCAAAGGCCGGACTATaGCCACAGGCTGCACTTTAT | + |
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Preference number: 5 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQPKAGL*PQAALY Trigger: ATAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTGG...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAACCATGGAGGCTAAGTTaGGCAGCACACCAAAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: KTNKVDEFGWDCGSFTTQPWRLS*AAHQSY Trigger: ATAACTTTGGTGTGCTGCCAAACTTAGCCTCCATGG...TTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTTAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACAGTTACCTTTATAGGTaGGGACAGTGTCCAATTTTC | + |
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Preference number: 5 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDSYLYR*GQCPIF Trigger: GAAAATTGGACACTGTCCCAACCTATAAAGGTAACT...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | AACAAAGTAGATGAATTTGGATGGGATTGTGGGTCTTTTACCACTCAATCAGACCAATCTTCCCTTGTTTaGGTTTATATTCTTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: NKVDEFGWDCGSFTTQSDQSSLV*VYILLA Trigger: TGCCAGAAGAATATAAACCAAAACAAGGGAAGATTG...GTCTGATTGAGTGGTAAAAGACCCACAATCCCATCCAAATTCATCTACTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565432.1 |
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| CDS-3UTR CAA 90 bp | AGATTGAACAGCCTGACTAATACAGCAAGAACCTGTCTCTACAAAGTATGTTTACAATCTTCCCTTGTTTaGGTTTATATTCTTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RLNSLTNTARTCLYKVCLQSSLV*VYILLA Trigger: TGCCAGAAGAATATAAACCAAAACAAGGGAAGATTG...TAAACATACTTTGTAGAGACAGGTTCTTGCTGTATTAGTCAGGCTGTTCAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339465.5 |
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| CDS CAA 72 bp | TGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTaGTCAGTCCTGGTCTGGCCCGGGTGGCATTTTACT | + |
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Preference number: 6 (lower is better) Translates to: CNFLIMAEAVAP*SVLVWPGWHFT Trigger: AGTAAAATGCCACCCGGGCCAGACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565006.1 |
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| CDS CAA 72 bp | TGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTaGTCAGTCCTGGTTGACTTTTCAGTCAGGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: CNFLIMAEAVAP*SVLVDFSVRRI Trigger: GATCCGCCTGACTGAAAAGTCAACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562097.5 ENST00000566861.5 |
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| CDS CAA 72 bp | TGCAATTTTCTGATTATGGCAGAGGCAGTGGCTCCCTaGTCAGTCCTGGTCCGCAGCTACAAATCTGACACA | + |
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Preference number: 6 (lower is better) Translates to: CNFLIMAEAVAP*SVLVRSYKSDT Trigger: TGTGTCAGATTTGTAGCTGCGGACCAGGACTGACAAGGGAGCCACTGCCTCTGCCATAATCAGAAAATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566205.1 |
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| CDS CAA 90 bp | CGAATTCAAATCCCGTTTGTAGGTAGTACCAAGATCAATCTTCCCTaGTTTTGGTTTATATTCTTCTGGCACATGGCGAGGCTGTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: RIQIPFVGSTKINLP*FWFIFFWHMARLFN Trigger: GTTAAACAGCCTCGCCATGTGCCAGAAGAATATAAACCAAAACAAGGGAAGATTGATCTTGGTACTACCTACAAACGGGATTTGAATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339465.5 ENST00000565432.1 ENST00000565501.1 ENST00000682753.1 |
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