RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SATB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119042

Ensembl transcript IDs: ENST00000260926.9, ENST00000417098.6, ENST00000428695.5, ENST00000440919.1, ENST00000443023.5, ENST00000457245.5, ENST00000463386.1, ENST00000473517.1, ENST00000483346.2, ENST00000484124.1, ENST00000614512.4

Found 1029 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCCATTAAACATCCAGTCAGCATTAGT +
Preference number: 1 (lower is better)
Translates to: VSHRKPKEIWSTIVD*SFNAHPIKHPVSIS
Trigger: ACTAATGCTGACTGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR TCA 90 bp GTAGTCTGCCTCAGGTACACACTGAGAAACTGCTTTAATGTAACCTaGCCCACGGTTATTAGTGAAAATATCACTTTTGTTGTTACCTTA +
Preference number: 1 (lower is better)
Translates to: VVCLRYTLRNCFNVT*PTVISENITFVVTL
Trigger: TAAGGTAACAACAAAAGTGATATTTTCACTAATAACCGTGGGTCAGGTTACATTAAAGCAGTTTCTCAGTGTGTACCTGAGGCAGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR CCA 90 bp GAAAGTAATGCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTaGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAA +
Preference number: 1 (lower is better)
Translates to: ESNASGVSHRKPKEI*STIVDCSFNAHPIK
Trigger: TTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGCATTACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR CCA 90 bp GTAAAAGACTTTCGTATGTATTTTGGGTGTAGCTACTTCTCTCTCTaGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTT +
Preference number: 1 (lower is better)
Translates to: VKDFRMYFGCSYFSL*SVHDDAECQLLNVF
Trigger: AAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGAGAAGTAGCTACACCCAAAATACATACGAAAGTCTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR CCA 90 bp GATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTCCTCCATaGGCAAGAAATAATTTGGGTTACAAAATGACTTCACATGAAACA +
Preference number: 1 (lower is better)
Translates to: DDAECQLLNVFLTPP*ARNNLGYKMTSHET
Trigger: TGTTTCATGTGAAGTCATTTTGTAACCCAAATTATTTCTTGCCCATGGAGGAGTAAGAAACACATTTAACAGTTGACATTCTGCATCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR CCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCAACCATCTTCCTGAATaGCTGTTTACTATAGGTCTA +
Preference number: 2 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTNHLPE*LFTIGL
Trigger: TAGACCTATAGTAAACAGCCATTCAGGAAGATGGTT...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR TCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTATAGTCACCCCACCCTaGGAGCAGGCCGCAGTTTAT +
Preference number: 2 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAIVTPP*EQAAVY
Trigger: ATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTAT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp AAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATTTTGGGCCAGGCATGGTGGCGTaGTGCTGGATTTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: KPLNGKQTHVKDFRMYFGPGMVA*CWISSY
Trigger: GTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGG...CCCAAAATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGGGGCCAGGGCTAACTaGAAACAACCATCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKGARAN*KQPSFC
Trigger: GCAAAAGGATGGTTGTTTGCAGTTAGCCCTGGCCCC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAATAGTCACCCCACCCTaGGAGCAGGCCGCAGTTTAT +
Preference number: 2 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPIVTPP*EQAAVY
Trigger: ATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTAT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 2 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTCTATTCTTTCGGATTaGAAAGTCTCTGTCCCATGC +
Preference number: 2 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSILSD*KVSVPC
Trigger: GCATGGGACAGAGACTTTGCAATCCGAAAGAATAGA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTATAAGCCAGGCATGGTaGCGTGCTGCTGGATTTCCA +
Preference number: 2 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLISQAW*RAAGFP
Trigger: TGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 2 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 2 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 2 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 2 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 2 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTCTATTGCCTGGAGCTaGACAACGATTCAAAAACAG +
Preference number: 2 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSSIAWS*TTIQKQ
Trigger: CTGTTTTTGAATCGTTGTGCAGCTCCAGGCAATAGA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCTTCACATACTCTATTaGCTGGAGCTGCACAACGAT +
Preference number: 2 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPLHILY*LELHND
Trigger: ATCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTACATACTCTATTGCCTaGAGCTGCACAACGATTCAA +
Preference number: 2 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSTYSIA*SCTTIQ
Trigger: TTGAATCGTTGTGCAGCTCCAGGCAATAGAGTATGT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp AAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATTTTGGGGCCATATTAGCAATTTaGCAGGTACCCGAGGGCCAT +
Preference number: 2 (lower is better)
Translates to: KPLNGKQTHVKDFRMYFGAILAI*QVPEGH
Trigger: ATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGC...CCCAAAATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 2 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTACAGTAATGACAAATTaGATAACGGAACGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSTVMTN*ITERSK
Trigger: CTTGCTACGTTCCGTTATTCAATTTGTCATTACTGT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 2 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTCTATTGCCTGGAGCTaGACAACGATTCAAAAACAG +
Preference number: 2 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPSIAWS*TTIQKQ
Trigger: CTGTTTTTGAATCGTTGTGCAGCTCCAGGCAATAGA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCC +
Preference number: 2 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSTIVD*SFNAHP
Trigger: GGGATGAGCATTAAAGCTGCAATCTACTATAGTACT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACATACTCTATTGCCTaGAGCTGCACAACGATTCAA +
Preference number: 2 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTYSIA*SCTTIQ
Trigger: TTGAATCGTTGTGCAGCTCCAGGCAATAGAGTATGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTATAGGTGTATCCTGTaGAACAAAGAAATGTCCAAA +
Preference number: 2 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSYRCIL*NKEMSK
Trigger: TTTGGACATTTCTTTGTTGCACAGGATACACCTATA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTATCAGAAATGTCTTTTaGGAGAGGGAAGGATGGAGA +
Preference number: 2 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAIRNVF*EREGWR
Trigger: TCTCCATCCTTCCCTCTCCCAAAAGACATTTCTGAT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCTGATTCGGAAATACTaGACTTATTCAGTCTATAGG +
Preference number: 2 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVLIRKY*TYSVYR
Trigger: CCTATAGACTGAATAAGTTCAGTATTTCCGAATCAG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 2 (lower is better)
Translates to: NRHICIVIRKDLARPQAKCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACAGTAATGACAAATTaGATAACGGAACGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTVMTN*ITERSK
Trigger: CTTGCTACGTTCCGTTATTCAATTTGTCATTACTGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp ATCCATAAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATCTAATCTGCATAAAATaGAGCAGATTGCAACCGCCC +
Preference number: 2 (lower is better)
Translates to: IHKPLNGKQTHVKDFRMYLICIK*SRLQPP
Trigger: GGGCGGTTGCAATCTGCTTCATTTTATGCAGATTAG...ATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTTATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 2 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 2 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR TCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTTGCTTTAATGTAACCTaGCCCACGGTTATTAGTGAA +
Preference number: 2 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTCFNVT*PTVISE
Trigger: TTCACTAATAACCGTGGGTCAGGTTACATTAAAGCA...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR TCA 90 bp AAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATTTTGGGCAAAATGACTTCACATaGAACACTGCTCGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: KPLNGKQTHVKDFRMYFGQNDFT*NTARAK
Trigger: TTTAGCACGAGCAGTGTTTCATGTGAAGTCATTTTG...CCCAAAATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAATCAGAAATGTCTTTTaGGAGAGGGAAGGATGGAGA +
Preference number: 2 (lower is better)
Translates to: NRHICIVIRKDLARPQAKIRNVF*EREGWR
Trigger: TCTCCATCCTTCCCTCTCCCAAAAGACATTTCTGAT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTCAGGGGCACTCAAAATaGCTATTGGAATTATCCAAA +
Preference number: 2 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLQGHSK*LLELSK
Trigger: TTTGGATAATTCCAATAGCCATTTTGAGTGCCCCTG...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR CAA 90 bp GTGGCTCATACTATGAATTCCATATGTCCAATGTCAAAATGTCATTaGATCAAGACTTGCACTAGTGGACAAAGTTTTCTCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: VAHTMNSICPMSKCH*IKTCTSGQSFLCTE
Trigger: TTCAGTGCAGAGAAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATGACATTTTGACATTGGACATATGGAATTCATAGTATGAGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAATTACCCATTAAGCTaGCAGATAGGAAGCCATAGA +
Preference number: 2 (lower is better)
Translates to: NRHICIVIRKDLARPQAKNYPLS*QIGSHR
Trigger: TCTATGGCTTCCTATCTGGCAGCTTAATGGGTAATT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: NRHICIVIRKDLARPQAKKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR GCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTATCCAAAAATTCAATTaGCCAGAGTGGATATCCTTA +
Preference number: 2 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTIQKFN*PEWISL
Trigger: TAAGGATATCCACTCTGGGCAATTGAATTTTTGGAT...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 3 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTTGTAATCCCAGTACTTaGGGAGGCCGAGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTCNPST*GGRGGH
Trigger: ATGCCCACCTCGGCCTCCCAAAGTACTGGGATTACA...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR CAA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTGGCCATATTAGCAATTaGGCAGGTACCCGAGGGCCA +
Preference number: 3 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTGHISN*AGTRGP
Trigger: TGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCC...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR CCA 72 bp AACCATGTGGGACTGTTTAATGGCCAGTTTAAAGCATaGATTACGTTCACTAGGCCAGTCCTGAATGTGAGG +
Preference number: 3 (lower is better)
Translates to: NHVGLFNGQFKA*ITFTRPVLNVR
Trigger: CCTCACATTCAGGACTGGCCTAGTGAACGTAATCCATGCTTTAAACTGGCCATTAAACAGTCCCACATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTATTCAAAAACAGTTCTaGTTAGGGCTGTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSIQKQF*LGLSSQ
Trigger: CTGGGATGACAGCCCTAACAAGAACTGTTTTTGAAT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 3 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 3 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGTCTATTCTTTCGGATaGCAAAGTCTCTGTCCCATG +
Preference number: 3 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDVYSFG*QSLCPM
Trigger: CATGGGACAGAGACTTTGCAATCCGAAAGAATAGAC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAGGATGGAGATTTATTaGAGAGGGAGCCCCTTTAAC +
Preference number: 3 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVRMEIY*RGSPFN
Trigger: GTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCCT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR TCA 72 bp CACCCAAATCTGCAGATAGGGCCCAATTTGTCTTTTTaGACTTCCAGTTGCTGCTTAGTTCATACAAACCTC +
Preference number: 3 (lower is better)
Translates to: HPNLQIGPNLSF*TSSCCLVHTNL
Trigger: GAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGCCCTATCTGCAGATTTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 3 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTATTCAAAAACAGTTCTaGTTAGGGCTGTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPIQKQF*LGLSSQ
Trigger: CTGGGATGACAGCCCTAACAAGAACTGTTTTTGAAT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATATTCAAAAACAGTTCTaGTTAGGGCTGTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDIQKQF*LGLSSQ
Trigger: CTGGGATGACAGCCCTAACAAGAACTGTTTTTGAAT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 3 (lower is better)
Translates to: NRHICIVIRKDLARPQAKASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp AACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATTCTTTTCCCACAAAATAGGTGGGCATTTCACTaGAGGTCAGGAGTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: NFQLLLSSYKPLILFPQNRWAFH*RSGVPD
Trigger: GTCTGGAACTCCTGACCTCAAGTGAAATGCCCACCT...ATTTTGTGGGAAAAGAATTAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR GCA 72 bp AGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCCATTAAACATCCAGTC +
Preference number: 3 (lower is better)
Translates to: RKPKEIWSTIVD*SFNAHPIKHPV
Trigger: GACTGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR CCA 72 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTaGAGTACTATAGTAGATTGCAGCTTTAATGCTCAT +
Preference number: 3 (lower is better)
Translates to: ASGVSHRKPKEI*STIVDCSFNAH
Trigger: ATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTATTGCATGAGGTCTTaGACAAGGTTTTGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPYCMRS*TRFCES
Trigger: GCTTTCACAAAACCTTGTCAAAGACCTCATGCAATA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 3 (lower is better)
Translates to: NRHICIVIRKDLARPQAKNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 3 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR CCA 72 bp TTTCGTATGTATTTTGGGTGTAGCTACTTCTCTCTCTaGTCTGTCCATGATGATGCAGAATGTCAACTGTTA +
Preference number: 3 (lower is better)
Translates to: FRMYFGCSYFSL*SVHDDAECQLL
Trigger: TAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGAGAAGTAGCTACACCCAAAATACATACGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATTTTCATCCTGGTACTaGCCTGATGTAACTTCCGTT +
Preference number: 3 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPFSSWY*PDVTSV
Trigger: AACGGAAGTTACATCAGGCAAGTACCAGGATGAAAA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACCACCTTGTAAGAGCTaGGCAAAATCAGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: NRHICIVIRKDLARPQAKPPCKS*AKSVSI
Trigger: AATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGCAGCTAGAATTAGCTaGTATTGCAACATGTCTTCT +
Preference number: 3 (lower is better)
Translates to: NRHICIVIRKDLARPQAKAARIS*YCNMSS
Trigger: AGAAGACATGTTGCAATACAAGCTAATTCTAGCTGC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
3UTR TCA 72 bp CTCAGGTACACACTGAGAAACTGCTTTAATGTAACCTaGCCCACGGTTATTAGTGAAAATATCACTTTTGTT +
Preference number: 3 (lower is better)
Translates to: LRYTLRNCFNVT*PTVISENITFV
Trigger: AACAAAAGTGATATTTTCACTAATAACCGTGGGTCAGGTTACATTAAAGCAGTTTCTCAGTGTGTACCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
3UTR-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 3 (lower is better)
Translates to: NRHICIVIRKDLARPQAKTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCCGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCCCAGGAGGCAGGGTTTaGTGCTCTCCAGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTPGGRV*CSPALG
Trigger: GCCCAAGGCTGGAGAGCAGCAAACCCTGCCTCCTGG...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp TACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGATCCGCCGCTCCATGCTaGTCCGACTCGGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: YGNKPGMVACCWISSYSGSAAPC*SDSETK
Trigger: CTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGA...TCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCCCAGGCATGGTGGCGTaGTGCTGGATTTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTPGMVA*CWISSY
Trigger: GTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGG...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp ATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAGGCTGAGGGTCTGTCTGAAACTTaGCTGACTGGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ISQAWWRAAGFPATPEAEGLSET*LTGALS
Trigger: GGACAGAGCCCCAGTCAGCCAAGTTTCAGACAGACC...CTCAGCCTCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp ATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAGGCTGAGCTCCGGAGGCTGAGGTaGGAGGATCCCTTAAATCCA +
Preference number: 4 (lower is better)
Translates to: ISQAWWRAAGFPATPEAELRRLR*EDPLNP
Trigger: TGGATTTAAGGGATCCTCCCACCTCAGCCTCCGGAG...CTCAGCCTCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCCTCTCGGCCGCCTCTaGCAGCAGCCAGAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSPLGRL*QQPEPD
Trigger: GTCCGGCTCTGGCTGCTGGCAGAGGCGGCCGAGAGG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTGGTCCTCCTCCTTGTaGCGGGTCCAGGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSWSSSL*RVQGAA
Trigger: GGCCGCGCCCTGGACCCGCCACAAGGAGGAGGACCA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR TCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCTGGGGGAGGCCCCTTaGCGTCCGGGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNALGEAP*RPGCRS
Trigger: GGAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCTGTCTGAAACTTGGCTaGCTGGGGCTCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSCLKLG*LGLCPW
Trigger: CCATGGACAGAGCCCCAGTCAGCCAAGTTTCAGACA...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGCTGGGTGCCGCGTCTaGCGGCGGAGACGCAGACCG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVAGCRV*RRRRRP
Trigger: CGGTCTGCGTCTCCGCCGGCAGACGCGGCACCCAGC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCGGAGCGAGGGGCTGTaGGTCGGCGCAGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPRSEGL*VGAGTL
Trigger: CAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTCCG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTCCCGCGGGCTCCCATaGGGCTGCCGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSRGLP*GCRSAP
Trigger: TGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCATAAGCCAGGCATGGTaGCGTGCTGCTGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTISQAW*RAAGFP
Trigger: TGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGGGGGAGGCCCCTTaGCGTCCGGGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLGEAP*RPGCRS
Trigger: GGAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTCTGGGGGAGGCCCCTTaGCGTCCGGGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLLGEAP*RPGCRS
Trigger: GGAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAG...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCTGGGGGAGGCCCCTTaGCGTCCGGGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLGEAP*RPGCRS
Trigger: GGAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAACCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPNLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAACCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVNLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACTGGGGGAGGCCCCTTaGCGTCCGGGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLGEAP*RPGCRS
Trigger: GGAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGTAGCTGCGCCCCGCTaGCGCGCTCTCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHVAAPR*RALSWV
Trigger: GACCCAGGAGAGAGCGCGTCAGCGGGGCGCAGCTAC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACGCCTTCGCCCCAAGTaGCCAGGACGGAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKRLRPK*PGRSEG
Trigger: CCCCTCGCTCCGTCCTGGGCACTTGGGGCGAAGGCG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCTCTCGGCCGCCTCTaGCAGCAGCCAGAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPLGRL*QQPEPD
Trigger: GTCCGGCTCTGGCTGCTGGCAGAGGCGGCCGAGAGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAGAGGCGACCGCGGCTaGCTCGGCTCCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVRGDRG*LGSQLC
Trigger: ACAGAGCTGGGAGCCGAGGCAGCCGCGGTCGCCTCT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTGGCAGAGAACCGAGTaGGGCGCGAGGCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAWQRTE*GARRWP
Trigger: CGGCCACCGCCTCGCGCCGCACTCGGTTCTCTGCCA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGAGCGAGGGGCTGTaGGTCGGCGCAGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRSEGL*VGAGTL
Trigger: CAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTCCG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCCGGGCCACCTTCACTaGGGGAGGCCCCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDPGHLH*GRPLDV
Trigger: GACGTCAAGGGGCCTCCCCCAGTGAAGGTGGCCCGG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTCCCGCGGGCTCCCATaGGGCTGCCGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPSRGLP*GCRSAP
Trigger: TGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCCTGGGGCTCTGTCCATaGAGCAAAAGTAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSLGLCP*SKSRES
Trigger: GGATTCTCTACTTTTGCTCCATGGACAGAGCCCCAG...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCGGGGCCCAGGGTCTaGTCCTCCTCCTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPGPRV*SSSLWR
Trigger: CCGCCACAAGGAGGAGGACCAGACCCTGGGCCCCGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCGCCATATTAGCAATTTaGCAGGTACCCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSAILAI*QVPEGH
Trigger: ATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGC...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTCCGCCGCTCCATGCTaGTCCGACTCGGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSAAPC*SDSETK
Trigger: CTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CAGGCCCAACGGAAGGCCATATTAGCAATTTGGCAGGTACCCGAGGGCCATACCGTGGAAAGTTTCTGGTaGTTGGCTTTGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QAQRKAILAIWQVPEGHTVESFW*LALQCS
Trigger: AGAACACTGCAAAGCCAAGCACCAGAAACTTTCCAC...GGTATGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCCTTCCGTTGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAAGGCAGTCGCTGGGTaGCGCGTCTGCCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHKAVAG*RVCRRR
Trigger: TCTCCGCCGGCAGACGCGGCACCCAGCGACTGCCTT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTAACCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTNLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTT...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAACCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSNLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGGAGCTGGGACTGCTaGAGGCCGAGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSRSWDC*RPRRPC
Trigger: GCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCCAGGGTGTCTTCTTCTaGTGCGGAGATGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSQGVFF*CGDGCY
Trigger: ATAACAACCATCTCCGCACCAGAAGAAGACACCCTG...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCGTAGAGAATCCAGGGTaGAAAGTTTCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSVENPG*KVSGAW
Trigger: CCAAGCACCAGAAACTTTCCACCCTGGATTCTCTAC...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACGCCTTCGCCCCAAGTaGCCAGGACGGAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERLRPK*PGRSEG
Trigger: CCCCTCGCTCCGTCCTGGGCACTTGGGGCGAAGGCG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATACTTCTCGGCTCGCTaGGCCCGCCTTCGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKYFSAR*ARLRPK
Trigger: CTTGGGGCGAAGGCGGGCGCAGCGAGCCGAGAAGTA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTACCGCGGAGCCCAGGTaGTCTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPTAEPR*SFSFPW
Trigger: CCACGGGAAGCTGAAAGAGCACCTGGGCTCCGCGGT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGTGACGAGGACCTCATaGACGAGGCGGCGAAGGACC +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVVTRTS*TRRRRT
Trigger: GGTCCTTCGCCGCCTCGTGCATGAGGTCCTCGTCAC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCCCGCGGGCTCCCATaGGGCTGCCGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSRGLP*GCRSAP
Trigger: TGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTTCCCGCGGGCTCCCATaGGGCTGCCGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTSRGLP*GCRSAP
Trigger: TGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGA...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCCCGCGGGCTCCCATaGGGCTGCCGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSRGLP*GCRSAP
Trigger: TGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAACCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRNLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGCGAGCCGGGGCTGCTaGTTCGCAGGGCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPASRGC*FAGRLA
Trigger: AGCTAGCCGCCCTGCGAACCAGCAGCCCCGGCTCGC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTCCACTCTTTCCACTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSSTLST*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGTGGAAAGAGTGGA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACGACAAGGCAGTCGCTaGGTGCCGCGTCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKRQGSR*VPRLPA
Trigger: CGCCGGCAGACGCGGCACCCAGCGACTGCCTTGTCG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGCGGCGAAGGACCGATaGCAGAGAACCGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKAAKDR*QRTECG
Trigger: GCCGCACTCGGTTCTCTGCCATCGGTCCTTCGCCGC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATTCCTCCCACGGCCTTaGCCACGGCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRFLPRP*PRRRWA
Trigger: GGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGAA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp TACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAAGCTACTTCTCTCTCTaGTCTGTCCATGATGATGCA +
Preference number: 4 (lower is better)
Translates to: YGNKPGMVACCWISSYSGSYFSL*SVHDDA
Trigger: TGCATCATCATGGACAGACCAGAGAGAGAAGTAGCT...TCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCGGTCGGAGCGGGGTaGCGAGGACCTCATGCACGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEAVGAG*RGPHAR
Trigger: TCGTGCATGAGGTCCTCGTCACCCCGCTCCGACCGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCAGAGCCGGACTCACTaGCAAGCCGCAGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDQSRTH*QAAERD
Trigger: GTCTCTCTCTGCGGCTTGTCAGTGAGTCCGGCTCTG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGTGGCATGGTTCCACTaGTCCGCAGGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSVAWFH*SAGKSS
Trigger: GGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCAC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSGFPRG*GFLGLG
Trigger: ACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTTCAGCTTCCCGTGGTaGTTCACGTGGTACCGCTGG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSFSFPW*FTWYRW
Trigger: CCAGCGGTACCACGTGAAGCACCACGGGAAGCTGAA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACACCGCGGAGCCCAGGTaGTCTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHTAEPR*SFSFPW
Trigger: CCACGGGAAGCTGAAAGAGCACCTGGGCTCCGCGGT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCAGCTTGGGACACACTaGCCCTCTTCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSQLGTH*PSSAHL
Trigger: GAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGGCTCAGGGGGAAGCTaGACCACGTGTTGCATGCGT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPGSGGS*TTCCMR
Trigger: ACGCATGCAACACGTGGTCCAGCTTCCCCCTGAGCC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGGCTCAGGGGGAAGCTaGACCACGTGTTGCATGCGT +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVGSGGS*TTCCMR
Trigger: ACGCATGCAACACGTGGTCCAGCTTCCCCCTGAGCC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGACCCAATTTGTCTTTTTaGACTTCCAGTTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: YGNKPGMVACCWISSYSGPNLSF*TSSCCL
Trigger: TAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGG...TCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGAGCCGACAGAAGGTaGCTTCGGCGTCACGCGTCC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGADRR*LRRHAS
Trigger: GGACGCGTGACGCCGAAGGCACCTTCTGTCGGCTCC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGGAGCCGACAGAAGGTaGCTTCGGCGTCACGCGTCC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRGADRR*LRRHAS
Trigger: GGACGCGTGACGCCGAAGGCACCTTCTGTCGGCTCC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRRSAAP*CSDSET
Trigger: TGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTACCGCGGAGCCCAGGTaGTCTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSTAEPR*SFSFPW
Trigger: CCACGGGAAGCTGAAAGAGCACCTGGGCTCCGCGGT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGGGGCCAGGGCTAACTaGAAACAACCATCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSGARAN*KQPSFC
Trigger: GCAAAAGGATGGTTGTTTGCAGTTAGCCCTGGCCCC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGCTGGGGAGGGTTGTaGGGACTACCCAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSWGGL*GLPKAR
Trigger: GCGTGCCTTGGGTAGTCCGCACAACCCTCCCCAGCT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCGAGTGCAAAGTAGCTaGGCCCCGCTGACGCGCTCT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRVQSS*APLTRS
Trigger: AGAGCGCGTCAGCGGGGCGCAGCTACTTTGCACTCG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTGCGGACTGTGGCATaGTTCCACTGCTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLRTVA*FHCSAG
Trigger: GCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGAGGAGACTGTTCGTTaGTTTTCCCCAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSEETVR*FSPGMP
Trigger: TGGCATCCCTGGGGAAAACCAACGAACAGTCTCCTC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSRPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGGAGCTGGGACTGCTaGAGGCCGAGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRSWDC*RPRRPC
Trigger: GCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGGAGCTGGGACTGCTaGAGGCCGAGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRSWDC*RPRRPC
Trigger: GCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSTSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGAGGGGAACTCTCCTTaGCTGGCTGAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVEGNSP*LAETAV
Trigger: GACAGCAGTCTCAGCCAGCCAAGGAGAGTTCCCCTC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCCACTCTTTCCACTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSTLST*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGTGGAAAGAGTGGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428695.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATTCTTTTCCCACAAAATGCTGCTCTCCAGCCTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NFQLLLSSYKPLILFPQNAALQP*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGGCTGGAGAGCAGC...ATTTTGTGGGAAAAGAATTAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTCCACCTTCCCAGCTTaGTTATTCCTTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVSTFPA*LFLGPG
Trigger: CCCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000417098.6
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTATGCGTTCGCTGTGGTaGTGCCTTGACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPMRSLW*CLDSSS
Trigger: TGAGGAGGAGTCAAGGCATCACCACAGCGAACGCAT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTATAGTCACCCCACCCTaGGAGCAGGCCGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPIVTPP*EQAAVY
Trigger: ATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTAT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTGTCTGAAACTTGGCTaGCTGGGGCTCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPCLKLG*LGLCPW
Trigger: CCATGGACAGAGCCCCAGTCAGCCAAGTTTCAGACA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGCTCACGGTCTGTCTaGAACTTGGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHCSRSV*NLADWG
Trigger: GCCCCAGTCAGCCAAGTTTCAGACAGACCGTGAGCA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp TACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAATTTGGGTTACAAAATaGCTTCACATGAAACACTGC +
Preference number: 4 (lower is better)
Translates to: YGNKPGMVACCWISSYSGIWVTK*LHMKHC
Trigger: GCAGTGTTTCATGTGAAGTCATTTTGTAACCCAAAT...TCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCCGCCGCTCCATGCTaGTCCGACTCGGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSAAPC*SDSETK
Trigger: CTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSHWDS*SAPSHP
Trigger: AGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGACCACGTGTTGCATaGGTTCGCTGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGPRVA*VRCGDA
Trigger: GGCATCACCACAGCGAACGCATGCAACACGTGGTCC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGGACCACGTGTTGCATaGGTTCGCTGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAGPRVA*VRCGDA
Trigger: GGCATCACCACAGCGAACGCATGCAACACGTGGTCC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAACCGCGGAGCCCAGGTaGTCTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRTAEPR*SFSFPW
Trigger: CCACGGGAAGCTGAAAGAGCACCTGGGCTCCGCGGT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAACCGCGGAGCCCAGGTaGTCTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPTAEPR*SFSFPW
Trigger: CCACGGGAAGCTGAAAGAGCACCTGGGCTCCGCGGT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATAGCTTGATTATTCCTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDSLIIP*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000417098.6
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTGCGGACTGTGGCATaGTTCCACTGCTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLRTVA*FHCSAG
Trigger: GCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGCGGACTGTGGCATaGTTCCACTGCTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLRTVA*FHCSAG
Trigger: GCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAGGCATTGCGGACTGTaGCATGGTTCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKRHCGL*HGSTAP
Trigger: CGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCAGCTTGGGACACACTaGCCCTCTTCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDQLGTH*PSSAHL
Trigger: GAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGGAGCTGGGACTGCTaGAGGCCGAGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERSWDC*RPRRPC
Trigger: GCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGCTCAGGGGGAAGCTaGACCACGTGTTGCATGCGT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVGSGGS*TTCCMR
Trigger: ACGCATGCAACACGTGGTCCAGCTTCCCCCTGAGCC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGGCTCAGGGGGAAGCTaGACCACGTGTTGCATGCGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSGSGGS*TTCCMR
Trigger: ACGCATGCAACACGTGGTCCAGCTTCCCCCTGAGCC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAEALLL*EGNSPW
Trigger: CCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACAGGGCATCCGGAGCTaGGGAGGGTTGTGCGGACTA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEQGIRS*GGLCGL
Trigger: TAGTCCGCACAACCCTCCCCAGCTCCGGATGCCCTG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGAAGACCAGGGCTCATaGTGGGCTGTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVEDQGS*WAVMRA
Trigger: TGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCCACTTCTGGCAGATTaGGGAAATTCTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPPLLAD*GNSAWP
Trigger: GGGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCCACTTCTGGCAGATTaGGGAAATTCTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDPLLAD*GNSAWP
Trigger: GGGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACTCCTCCTCATAGATaGCATCCCTCTCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTPPHR*HPSHAG
Trigger: CCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATGCGTTCGCTGTGGTaGTGCCTTGACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKMRSLW*CLDSSS
Trigger: TGAGGAGGAGTCAAGGCATCACCACAGCGAACGCAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GCCCAATTTGTCTTTTTGAACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTATGCTCACGGTCTGTCTaGAACTTGGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: AQFVFLNFQLLLSSYKPLCSRSV*NLADWG
Trigger: GCCCCAGTCAGCCAAGTTTCAGACAGACCGTGAGCA...TAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATCAATCAATCGCTGTaGGCACGGCGACCCAACGGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSINQSL*ARRPNG
Trigger: GCCGTTGGGTCGCCGTGCTCACAGCGATTGATTGAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCACTGTCGCGTCGGGTaGATCTGTCACATAACTGAG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVHCRVG*ICHITE
Trigger: CTCAGTTATGTGACAGATGCACCCGACGCGACAGTG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGTGGCATGGTTCCACTaGTCCGCAGGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSVAWFH*SAGKSS
Trigger: GGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCAC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTGGCATGGTTCCACTaGTCCGCAGGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVAWFH*SAGKSS
Trigger: GGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSLCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGFPRG*GFLGLG
Trigger: ACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATTCAGCTTCCCGTGGTaGTTCACGTGGTACCGCTGG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSFSFPW*FTWYRW
Trigger: CCAGCGGTACCACGTGAAGCACCACGGGAAGCTGAA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTCAGCTTCCCGTGGTaGTTCACGTGGTACCGCTGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVFSFPW*FTWYRW
Trigger: CCAGCGGTACCACGTGAAGCACCACGGGAAGCTGAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGGGGCCAGGGCTAACTaGAAACAACCATCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVGARAN*KQPSFC
Trigger: GCAAAAGGATGGTTGTTTGCAGTTAGCCCTGGCCCC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGGGGCCAGGGCTAACTaGAAACAACCATCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPGARAN*KQPSFC
Trigger: GCAAAAGGATGGTTGTTTGCAGTTAGCCCTGGCCCC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCAGAATCGGCGAGTaGAAAGTAGCTGCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEVRIGE*KVAAPR
Trigger: GCGGGGCGCAGCTACTTTGCACTCGCCGATTCTGAC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATTGCGGACTGTGGCATaGTTCCACTGCTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLRTVA*FHCSAG
Trigger: GCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGGCATTGCGGACTGTaGCATGGTTCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRHCGL*HGSTAP
Trigger: CGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCATCTCCCAAACTCCTaGCACTTGGTTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSHLPNS*HLVADT
Trigger: TGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTGTAATGCGGGCACTTaGTTTCGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSCNAGT*FRIGVL
Trigger: CAGTACTCCAATCCGAAACCAAGTGCCCGCATTACA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCTGGGGATGGGTGGATaGTTCAGGAACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLGMGG*FRNCWL
Trigger: CAACCAGCAGTTCCTGAACCATCCACCCATCCCCAG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACTGGGGATGGGTGGATaGTTCAGGAACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLGMGG*FRNCWL
Trigger: CAACCAGCAGTTCCTGAACCATCCACCCATCCCCAG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCAGCTTGGGACACACTaGCCCTCTTCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAQLGTH*PSSAHL
Trigger: GAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPRPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVRPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPTSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGAGGGGAACTCTCCTTaGCTGGCTGAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSEGNSP*LAETAV
Trigger: GACAGCAGTCTCAGCCAGCCAAGGAGAGTTCCCCTC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGAGGGGAACTCTCCTTaGCTGGCTGAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVEGNSP*LAETAV
Trigger: GACAGCAGTCTCAGCCAGCCAAGGAGAGTTCCCCTC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSEALLL*EGNSPW
Trigger: CCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVEALLL*EGNSPW
Trigger: CCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVDGFLV*VQAYIM
Trigger: CATGATGTAGGCCTGTACCCAGACCAGGAAGCCATC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPDGFLV*VQAYIM
Trigger: CATGATGTAGGCCTGTACCCAGACCAGGAAGCCATC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCTGGGGCTCTGTCCATaGAGCAAAAGTAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSLGLCP*SKSRES
Trigger: GGATTCTCTACTTTTGCTCCATGGACAGAGCCCCAG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAAACCCAAGCCAGACTaGTCCACCGCAAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSKPKPD*STARKE
Trigger: CTCTTTTCTTGCGGTGGACCAGTCTGGCTTGGGTTT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCCACCTTCCCAGCTTaGTTATTCCTTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSTFPA*LFLGPG
Trigger: CCCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACCACTTCTGGCAGATTaGGGAAATTCTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKPLLAD*GNSAWP
Trigger: GGGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCACTTCTGGCAGATTaGGGAAATTCTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPLLAD*GNSAWP
Trigger: GGGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATGCGTTCGCTGTGGTaGTGCCTTGACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSMRSLW*CLDSSS
Trigger: TGAGGAGGAGTCAAGGCATCACCACAGCGAACGCAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATGCGTTCGCTGTGGTaGTGCCTTGACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVMRSLW*CLDSSS
Trigger: TGAGGAGGAGTCAAGGCATCACCACAGCGAACGCAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGGGGAGATCCAGCTaGGCCGAAAGAGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLGRSS*AERVWM
Trigger: CATCCACACTCTTTCGGCTCAGCTGGATCTCCCCAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTGGGGAGATCCAGCTaGGCCGAAAGAGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLGRSS*AERVWM
Trigger: CATCCACACTCTTTCGGCTCAGCTGGATCTCCCCAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATAGTCACCCCACCCTaGGAGCAGGCCGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVIVTPP*EQAAVY
Trigger: ATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAACTCCAGAGGTTACTaGGCAGCTAGAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSNSRGY*AARISL
Trigger: CAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGGAAGAGAAGGAGGCTaGAAGAGCCTTTTCACACCT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPGREGG*KSLFTP
Trigger: AGGTGTGAAAAGGCTCTTTCAGCCTCCTTCTCTTCC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATGCTCACGGTCTGTCTaGAACTTGGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRCSRSV*NLADWG
Trigger: GCCCCAGTCAGCCAAGTTTCAGACAGACCGTGAGCA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTGGTGGGCATTTCACTTaGGGTCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTGGHFT*GQEFQT
Trigger: GGTCTGGAACTCCTGACCTCAAGTGAAATGCCCACC...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACACTGTCGCGTCGGGTaGATCTGTCACATAACTGAG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKHCRVG*ICHITE
Trigger: CTCAGTTATGTGACAGATGCACCCGACGCGACAGTG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGTTCCTTTAAGGCATTaGGGACTGTGGCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDVPLRH*GLWHGS
Trigger: GGAACCATGCCACAGTCCGCAATGCCTTAAAGGAAC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGTTGAATGCCACTCTTaGAAAGACAGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSVECHS*KDSLGH
Trigger: GTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAAC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPLCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTCTCATCCTGGTAGATaGGATCTCGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDSHPGR*DLAPLL
Trigger: CAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSGFPRG*GFLGLG
Trigger: ACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSGFPRG*GFLGLG
Trigger: ACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTATGACATCCCTCTCATaGTGGGGAAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPMTSLS*WGRFRK
Trigger: CTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCAT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATATGACATCCCTCTCATaGTGGGGAAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDMTSLS*WGRFRK
Trigger: CTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCAT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGGACCACGTGTTGCATaGGTTCGCTGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKGPRVA*VRCGDA
Trigger: GGCATCACCACAGCGAACGCATGCAACACGTGGTCC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTCAGCTTCCCGTGGTaGTTCACGTGGTACCGCTGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEFSFPW*FTWYRW
Trigger: CCAGCGGTACCACGTGAAGCACCACGGGAAGCTGAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATTCAGCTTCCCGTGGTaGTTCACGTGGTACCGCTGG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKFSFPW*FTWYRW
Trigger: CCAGCGGTACCACGTGAAGCACCACGGGAAGCTGAA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGCTTGATTATTCCTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSLIIP*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAGGCATTGCGGACTGTaGCATGGTTCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPRHCGL*HGSTAP
Trigger: CGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCATCTCCCAAACTCCTaGCACTTGGTTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVHLPNS*HLVADT
Trigger: TGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSPRDAS*FIFGKC
Trigger: GCATTTACCAAATATGAACCAGCTGGCATCCCTGGG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAGGAGACTGTTCGTTaGTTTTCCCCAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHEETVR*FSPGMP
Trigger: TGGCATCCCTGGGGAAAACCAACGAACAGTCTCCTC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGGGGATGGGTGGATaGTTCAGGAACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLGMGG*FRNCWL
Trigger: CAACCAGCAGTTCCTGAACCATCCACCCATCCCCAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCTGGGGATGGGTGGATaGTTCAGGAACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLGMGG*FRNCWL
Trigger: CAACCAGCAGTTCCTGAACCATCCACCCATCCCCAG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCTTGGGACACACTaGCCCTCTTCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVQLGTH*PSSAHL
Trigger: GAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTATTTGCAGCCACTTTaGCAAACAGGGCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSYLQPL*QTGLET
Trigger: TGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEAVFWA*VLLPAE
Trigger: CTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHTSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGAGGGGAACTCTCCTTaGCTGGCTGAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPEGNSP*LAETAV
Trigger: GACAGCAGTCTCAGCCAGCCAAGGAGAGTTCCCCTC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPEALLL*EGNSPW
Trigger: CCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEEALLL*EGNSPW
Trigger: CCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGAGACCGGGGCTTTTTaGCACAACTGTCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKETGAF*HNCLQS
Trigger: CGACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAGACCGGGGCTTTTTaGCACAACTGTCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHETGAF*HNCLQS
Trigger: CGACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNADGFLV*VQAYIM
Trigger: CATGATGTAGGCCTGTACCCAGACCAGGAAGCCATC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCGAAAGAGTGTGGATaGCTTCCTGGTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPKECG*LPGLGT
Trigger: TGTACCCAGACCAGGAAGCCATCCACACTCTTTCGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCCGAAAGAGTGTGGATaGCTTCCTGGTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAPKECG*LPGLGT
Trigger: TGTACCCAGACCAGGAAGCCATCCACACTCTTTCGG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACCGAAAGAGTGTGGATaGCTTCCTGGTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKPKECG*LPGLGT
Trigger: TGTACCCAGACCAGGAAGCCATCCACACTCTTTCGG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGGCCAGTTTAAAGCATaGATTACGTTCACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSGQFKA*ITFTRP
Trigger: TGGCCTAGTGAACGTAATCCATGCTTTAAACTGGCC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGAAGGAGACCCGTTCTaGAGAGAAAGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKEGDPF*RERAEN
Trigger: GTTCTCAGCCCTTTCTCTCCAGAACGGGTCTCCTTC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGGGTGGAAAGTTTCTaGTGCTTGGCTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSRVESF*CLALQC
Trigger: ACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGTAGAGAATCCAGGGTaGAAAGTTTCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSVENPG*KVSGAW
Trigger: CCAAGCACCAGAAACTTTCCACCCTGGATTCTCTAC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGGTAGGGGAAGTCTCTaGATTATTTCGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAGRGSL*IISGWG
Trigger: CCCCCATCCCGAAATAATCCAGAGACTTCCCCTACC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCCACCTTCCCAGCTTaGTTATTCCTTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESTFPA*LFLGPG
Trigger: CCCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTTTACTAGAAGAGACTaGGAGGCTGTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAFTRRD*EAVRGS
Trigger: AGACCCTCGGACAGCCTCTCAGTCTCTTCTAGTAAA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTTACTAGAAGAGACTaGGAGGCTGTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHFTRRD*EAVRGS
Trigger: AGACCCTCGGACAGCCTCTCAGTCTCTTCTAGTAAA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTACTCCTCCTCATAGATaGCATCCCTCTCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVTPPHR*HPSHAG
Trigger: CCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACTCCTCCTCATAGATaGCATCCCTCTCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTPPHR*HPSHAG
Trigger: CCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAATGCGTTCGCTGTGGTaGTGCCTTGACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKMRSLW*CLDSSS
Trigger: TGAGGAGGAGTCAAGGCATCACCACAGCGAACGCAT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTGGGGAGATCCAGCTaGGCCGAAAGAGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELGRSS*AERVWM
Trigger: CATCCACACTCTTTCGGCTCAGCTGGATCTCCCCAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATTGGGGAGATCCAGCTaGGCCGAAAGAGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLGRSS*AERVWM
Trigger: CATCCACACTCTTTCGGCTCAGCTGGATCTCCCCAA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATAGTCACCCCACCCTaGGAGCAGGCCGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRIVTPP*EQAAVY
Trigger: ATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATGTCTGAAACTTGGCTaGCTGGGGCTCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKCLKLG*LGLCPW
Trigger: CCATGGACAGAGCCCCAGTCAGCCAAGTTTCAGACA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATCCACCTTCCCAGCTTaGTTATTCCTCCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKSTFPA*LFLPRP
Trigger: AGGCCGTGGGAGGAATAATCAAGCTGGGAAGGTGGA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACCTTGATGTTGAACTaGGAATCCTCCTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTLMLN*ESSSGS
Trigger: TGATCCGGAGGAGGATTCGCAGTTCAACATCAAGGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGTCGCGTCGGGTaGATCTGTCACATAACTGAG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVHCRVG*ICHITE
Trigger: CTCAGTTATGTGACAGATGCACCCGACGCGACAGTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCACTGTCGCGTCGGGTaGATCTGTCACATAACTGAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSHCRVG*ICHITE
Trigger: CTCAGTTATGTGACAGATGCACCCGACGCGACAGTG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGTTCCTTTAAGGCATTaGGGACTGTGGCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHVPLRH*GLWHGS
Trigger: GGAACCATGCCACAGTCCGCAATGCCTTAAAGGAAC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPWLWLN*SGDGWM
Trigger: CATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNALCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGATTGAGGAAATTCTaGATGGCCCTCAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSRLRKF*MALRFT
Trigger: AGTAAACCTGAGGGCCATGCAGAATTTCCTCAATCT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSHWDS*SAPSHP
Trigger: AGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGGCCGAGGAGACCATaGTCACATTGGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRPRRP*SHWDSC
Trigger: GCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGGCCGAGGAGACCATaGTCACATTGGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRPRRP*SHWDSC
Trigger: GCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGFPRG*GFLGLG
Trigger: ACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCTAAGGAGATCTTTGTaGGAGACCGGGGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLRRSL*ETGAFW
Trigger: CCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAATTTCGGCAGGTGCTaGCTTGCTTTTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSNFGRC*LAFVSI
Trigger: AATGCTGACAAAAGCAAGGCAGCACCTGCCGAAATT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTCTTCACATACTCTATTaGCTGGAGCTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSLHILY*LELHND
Trigger: ATCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAG...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGACCACAGGCTAAAATaGCCACAGATTCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSDHRLK*PQIHLE
Trigger: TTCTAAGTGAATCTGTGGGCATTTTAGCCTGTGGTC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGGTGTCTTCTTCTGGTaGGGAGATGGTTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSGVFFW*GDGCYD
Trigger: ATCATAACAACCATCTCCGCACCAGAAGAAGACACC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTCTGGTGCTTGGCTTTaGAGTGTTCTCCTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDSGAWL*SVLLVF
Trigger: GAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCCCAGCTCTGTTAACTaGGCGGAGTACTTTCGACTT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAPSSVN*AEYFRL
Trigger: AAGTCGAAAGTACTCCGCGCAGTTAACAGAGCTGGG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGCTTGATTATTCCTTaGGCCTGGGCCGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKSLIIP*AWAAEL
Trigger: CAGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000417098.6
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACATCTCCCAAACTCCTaGCACTTGGTTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKHLPNS*HLVADT
Trigger: TGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPPRDAS*FIFGKC
Trigger: GCATTTACCAAATATGAACCAGCTGGCATCCCTGGG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDPRDAS*FIFGKC
Trigger: GCATTTACCAAATATGAACCAGCTGGCATCCCTGGG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGAGGAGACTGTTCGTTaGTTTTCCCCAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVEETVR*FSPGMP
Trigger: TGGCATCCCTGGGGAAAACCAACGAACAGTCTCCTC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGAGGAGACTGTTCGTTaGTTTTCCCCAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSEETVR*FSPGMP
Trigger: TGGCATCCCTGGGGAAAACCAACGAACAGTCTCCTC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNASCGLS*GERRPG
Trigger: CCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSCGLS*GERRPG
Trigger: CCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACTGGGGATGGGTGGATaGTTCAGGAACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELGMGG*FRNCWL
Trigger: CAACCAGCAGTTCCTGAACCATCCACCCATCCCCAG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACAGCTTGGGACACACTaGCCCTCTTCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRQLGTH*PSSAHL
Trigger: GAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNASGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGAGACCGGGGCTTTTTaGCACAACTGTCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSETGAF*HNCLQS
Trigger: CGACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSDGFLV*VQAYIM
Trigger: CATGATGTAGGCCTGTACCCAGACCAGGAAGCCATC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCCGAAAGAGTGTGGATaGCTTCCTGGTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSPKECG*LPGLGT
Trigger: TGTACCCAGACCAGGAAGCCATCCACACTCTTTCGG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATCTTTCAGCTTCCCGTaGTGCTTCACGTGGTACCGC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRSFSFP*CFTWYR
Trigger: GCGGTACCACGTGAAGCACCACGGGAAGCTGAAAGA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGGGAGCCCCTTTAACTaGGCAGCAACTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVGSPFN*AATSFL
Trigger: TAGAAAAGAAGTTGCTGCCCAGTTAAAGGGGCTCCC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGAAGGAGACCCGTTCTaGAGAGAAAGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSEGDPF*RERAEN
Trigger: GTTCTCAGCCCTTTCTCTCCAGAACGGGTCTCCTTC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGTCTGTCTGAAACTTaGCTGACTGGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGLSET*LTGALS
Trigger: GGACAGAGCCCCAGTCAGCCAAGTTTCAGACAGACC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGGTCTGTCTGAAACTTaGCTGACTGGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKGLSET*LTGALS
Trigger: GGACAGAGCCCCAGTCAGCCAAGTTTCAGACAGACC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTGTAATCCCAGTACTTTaGGAGGCCGAGGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLVIPVL*EAEVGI
Trigger: AATGCCCACCTCGGCCTCCCAAAGTACTGGGATTAC...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATTTACTAGAAGAGACTaGGAGGCTGTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSFTRRD*EAVRGS
Trigger: AGACCCTCGGACAGCCTCTCAGTCTCTTCTAGTAAA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTTACTAGAAGAGACTaGGAGGCTGTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVFTRRD*EAVRGS
Trigger: AGACCCTCGGACAGCCTCTCAGTCTCTTCTAGTAAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACCACTTCTGGCAGATTaGGGAAATTCTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPPLLAD*GNSAWP
Trigger: GGGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATTGGCAAACAGGGCTTaGGACACCTTGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLANRA*DTLALF
Trigger: GAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGAC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKAVVMP*LLLIDD
Trigger: GTCATCTATGAGGAGGAGTCAAGGCATCACCACAGC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTACAGGCCTACATCATaGATAAAGCTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSYRPTS*IKLWRI
Trigger: GATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAACTCCAGAGGTTACTaGGCAGCTAGAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVNSRGY*AARISL
Trigger: CAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGGAAGAGAAGGAGGCTaGAAGAGCCTTTTCACACCT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSGREGG*KSLFTP
Trigger: AGGTGTGAAAAGGCTCTTTCAGCCTCCTTCTCTTCC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAGTCATCAGGCAAAGTaGGTCCTTTTGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSHQAK*VLLGCP
Trigger: AGGACAACCCAAAAGGACTCACTTTGCCTGATGACT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTACACTGAGAGGGAGATaGTTATTAGTTGCGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSTLRGR*LLVALS
Trigger: ACTCAACGCAACTAATAATCATCTCCCTCTCAGTGT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACACCTTGATGTTGAACTaGGAATCCTCCTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHTLMLN*ESSSGS
Trigger: TGATCCGGAGGAGGATTCGCAGTTCAACATCAAGGT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGTTCCTTTAAGGCATTaGGGACTGTGGCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSVPLRH*GLWHGS
Trigger: GGAACCATGCCACAGTCCGCAATGCCTTAAAGGAAC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCTCATCCTGGTAGATaGGATCTCGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSHPGR*DLAPLL
Trigger: CAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTCATCCTGGTAGATaGGATCTCGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSHPGR*DLAPLL
Trigger: CAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSHWDS*SAPSHP
Trigger: AGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCACATTGGGATTCATaGTCCGCTCCCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSHWDS*SAPSHP
Trigger: AGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSHWDS*SAPSHP
Trigger: AGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAGGCCGAGGAGACCATaGTCACATTGGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPRPRRP*SHWDSC
Trigger: GCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGGCCGAGGAGACCATaGTCACATTGGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERPRRP*SHWDSC
Trigger: GCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGCCCTGACTTTTATTTaGAGCCACTTTGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDALTFI*SHFGKQ
Trigger: CTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAATGACATCCCTCTCATaGTGGGGAAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSMTSLS*WGRFRK
Trigger: CTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCAT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATGACATCCCTCTCATaGTGGGGAAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVMTSLS*WGRFRK
Trigger: CTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATGACATCCCTCTCATaGTGGGGAAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSMTSLS*WGRFRK
Trigger: CTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCTAAGGAGATCTTTGTaGGAGACCGGGGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLRRSL*ETGAFW
Trigger: CCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTAAGGAGATCTTTGTaGGAGACCGGGGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLRRSL*ETGAFW
Trigger: CCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAATTTCGGCAGGTGCTaGCTTGCTTTTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPNFGRC*LAFVSI
Trigger: AATGCTGACAAAAGCAAGGCAGCACCTGCCGAAATT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCTTCACATACTCTATTaGCTGGAGCTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVLHILY*LELHND
Trigger: ATCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGGGGCCAGGGCTAACTaGAAACAACCATCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEGARAN*KQPSFC
Trigger: GCAAAAGGATGGTTGTTTGCAGTTAGCCCTGGCCCC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATCTGGTGCTTGGCTTTaGAGTGTTCTCCTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSGAWL*SVLLVF
Trigger: GAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGTGGAAAGTTTCTGGTaGTTGGCTTTGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDVESFW*LALQCS
Trigger: AGAACACTGCAAAGCCAAGCACCAGAAACTTTCCAC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAAVSTS*LKSTSF
Trigger: GAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHAVSTS*LKSTSF
Trigger: GAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGATGAAATCATACTCTaGGAGAGAGGGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSDEIIL*ERGHSL
Trigger: CAAAGAATGCCCTCTCTCCCAGAGTATGATTTCATC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACAAACTCCTGGCACTTaGTTGCTGACACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKQTPGT*LLTHWH
Trigger: ATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCAAACTCCTGGCACTTaGTTGCTGACACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAQTPGT*LLTHWH
Trigger: ATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATCTCCCAAACTCCTaGCACTTGGTTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSHLPNS*HLVADT
Trigger: TGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPRDAS*FIFGKC
Trigger: GCATTTACCAAATATGAACCAGCTGGCATCCCTGGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGAGGAGACTGTTCGTTaGTTTTCCCCAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEEETVR*FSPGMP
Trigger: TGGCATCCCTGGGGAAAACCAACGAACAGTCTCCTC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSCGLS*GERRPG
Trigger: CCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSCGLS*GERRPG
Trigger: CCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCTAACGGCAATCTGTTaGTTTATCAGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLTAIC*FIRWAM
Trigger: CATGGCCCATCTGATAAACCAACAGATTGCCGTTAG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVLLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLAKTA*DTLALF
Trigger: GAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRRPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGACCATGCTCACATTaGGATTCATGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERPCSH*DSCSAP
Trigger: GGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTATTTGCAGCCACTTTaGCAAACAGGGCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVYLQPL*QTGLET
Trigger: TGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAACATCCCTCTCATGCTaGGGAAGGTTCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVETSLSC*GRFRKR
Trigger: TCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGAACTCTCCTTGGCTaGCTGAGACTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGTLLG*LRLLSM
Trigger: CATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGAGACCGGGGCTTTTTaGCACAACTGTCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEETGAF*HNCLQS
Trigger: CGACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGAGACCGGGGCTTTTTaGCACAACTGTCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRETGAF*HNCLQS
Trigger: CGACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEDGFLV*VQAYIM
Trigger: CATGATGTAGGCCTGTACCCAGACCAGGAAGCCATC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACCGAAAGAGTGTGGATaGCTTCCTGGTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKPKECG*LPGLGT
Trigger: TGTACCCAGACCAGGAAGCCATCCACACTCTTTCGG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSSSHYL*SISAGA
Trigger: AGCACCTGCCGAAATTGACCAGAGATAATGTGAACT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGGGAGCCCCTTTAACTaGGCAGCAACTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAGSPFN*AATSFL
Trigger: TAGAAAAGAAGTTGCTGCCCAGTTAAAGGGGCTCCC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGGCCAGTTTAAAGCATaGATTACGTTCACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDGQFKA*ITFTRP
Trigger: TGGCCTAGTGAACGTAATCCATGCTTTAAACTGGCC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGGCCAGTTTAAAGCATaGATTACGTTCACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVGQFKA*ITFTRP
Trigger: TGGCCTAGTGAACGTAATCCATGCTTTAAACTGGCC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCAGGGTGTCTTCTTCTaGTGCGGAGATGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHQGVFF*CGDGCY
Trigger: ATAACAACCATCTCCGCACCAGAAGAAGACACCCTG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGGGTGGAAAGTTTCTaGTGCTTGGCTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHRVESF*CLALQC
Trigger: ACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTCTGGTTCATCTCTTTaGGCAGTTCCTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPSGSSL*AVPLRH
Trigger: ATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCTGGCACTTGGTTGCTaGCACATTGGCATAATATGT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLALGC*HIGIIC
Trigger: ACATATTATGCCAATGTGTCAGCAACCAAGTGCCAG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAATCCCTGTGTGCGGTTaGATGCCACTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEIPVCG*MPLLQR
Trigger: TCTTTGCAAGAGTGGCATTCAACCGCACACAGGGAT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATTTACTAGAAGAGACTaGGAGGCTGTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKFTRRD*EAVRGS
Trigger: AGACCCTCGGACAGCCTCTCAGTCTCTTCTAGTAAA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTACAGGCCTACATCATaGATAAAGCTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPYRPTS*IKLWRI
Trigger: GATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCTGATTCGGAAATACTaGACTTATTCAGTCTATAGG +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSLIRKY*TYSVYR
Trigger: CCTATAGACTGAATAAGTTCAGTATTTCCGAATCAG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATTACTACTAAAAATACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCACAAACCATCTTCCTaGATGGCTGTTTACTATAGG +
Preference number: 4 (lower is better)
Translates to: ITTKNTEISQAWWRAAGFHKPSS*MAVYYR
Trigger: CCTATAGTAAACAGCCATTCAGGAAGATGGTTTGTG...AAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTATTTTTAGTAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEREPSN*STTQKT
Trigger: TGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGTTCCTTTAAGGCATTaGGGACTGTGGCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPVPLRH*GLWHGS
Trigger: GGAACCATGCCACAGTCCGCAATGCCTTAAAGGAAC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTTCATATTTGGTAAATaGATTGGACGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVFIFGK*IGRWPR
Trigger: TCTGGGCCAGCGTCCAATGCATTTACCAAATATGAA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTTCATATTTGGTAAATaGATTGGACGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPFIFGK*IGRWPR
Trigger: TCTGGGCCAGCGTCCAATGCATTTACCAAATATGAA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGGTTTTCCCCAGGGATaGCAGCTGGTTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEGFPQG*QLVHIW
Trigger: CCAAATATGAACCAGCTGGCATCCCTGGGGAAAACC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGTTGAATGCCACTCTTaGAAAGACAGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSVECHS*KDSLGH
Trigger: GTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAAC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLCAVE*HSCKDS
Trigger: GCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCTCATCCTGGTAGATaGGATCTCGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESHPGR*DLAPLL
Trigger: CAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACTAAGGAGATCTTTGTaGGAGACCGGGGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLRRSL*ETGAFW
Trigger: CCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACTAAGGAGATCTTTGTaGGAGACCGGGGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLRRSL*ETGAFW
Trigger: CCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAATTTCGGCAGGTGCTaGCTTGCTTTTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKNFGRC*LAFVSI
Trigger: AATGCTGACAAAAGCAAGGCAGCACCTGCCGAAATT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAATTTCGGCAGGTGCTaGCTTGCTTTTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHNFGRC*LAFVSI
Trigger: AATGCTGACAAAAGCAAGGCAGCACCTGCCGAAATT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGTCAATTTCGGCAGGTaGTGCCTTGCTTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPVNFGR*CLAFVS
Trigger: GCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGAC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGACCACAGGCTAAAATaGCCACAGATTCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVDHRLK*PQIHLE
Trigger: TTCTAAGTGAATCTGTGGGCATTTTAGCCTGTGGTC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGGTGTCTTCTTCTGGTaGGGAGATGGTTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKGVFFW*GDGCYD
Trigger: ATCATAACAACCATCTCCGCACCAGAAGAAGACACC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR GCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTTCTGGTGCTTGGCTTTaGAGTGTTCTCCTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLSGAWL*SVLLVF
Trigger: GAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGA...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGTAATTGGGTTTGTTaGTTACCTAAGCTCGAGTTC +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSSNWVC*LPKLEF
Trigger: GAACTCGAGCTTAGGTAACCAACAAACCCAATTACT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSAVSTS*LKSTSF
Trigger: GAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATTTTGGGGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: KPLNGKQTHVKDFRMYFGAVSTS*LKSTSF
Trigger: GAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGC...CCCAAAATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTTGGCTAATGTGCTCTaGTTCATCTCTTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPLANVL*FISLSS
Trigger: ACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCAAACTCCTGGCACTTaGTTGCTGACACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSQTPGT*LLTHWH
Trigger: ATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATGTAATGCGGGCACTTaGTTTCGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSCNAGT*FRIGVL
Trigger: CAGTACTCCAATCCGAAACCAAGTGCCCGCATTACA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGTAATGCGGGCACTTaGTTTCGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVCNAGT*FRIGVL
Trigger: CAGTACTCCAATCCGAAACCAAGTGCCCGCATTACA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESCGLS*GERRPG
Trigger: CCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTTATCAGATGGGCCATaGCTATTTGTTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSLSDGP*LFVALQ
Trigger: TTGTAAGGCAACAAATAGCCATGGCCCATCTGATAA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCTAACGGCAATCTGTTaGTTTATCAGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHLTAIC*FIRWAM
Trigger: CATGGCCCATCTGATAAACCAACAGATTGCCGTTAG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKRVGWL*LNCSGD
Trigger: ATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACACGGAAGAGTTGGTTaGCTCTGGCTTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEHGRVG*LWLNCS
Trigger: AGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNALLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTATTTGCAGCCACTTTaGCAAACAGGGCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHYLQPL*QTGLET
Trigger: TGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRSGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATCAGGAAGCGACGGATaGTACAGAGGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPSGSDG*YRGFPR
Trigger: TCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGGAGCCCCTTTAACTaGGCAGCAACTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVGSPFN*AATSFL
Trigger: TAGAAAAGAAGTTGCTGCCCAGTTAAAGGGGCTCCC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGGGAGCCCCTTTAACTaGGCAGCAACTTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSGSPFN*AATSFL
Trigger: TAGAAAAGAAGTTGCTGCCCAGTTAAAGGGGCTCCC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCATCAGAAATGTCTTTTaGGAGAGGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVIRNVF*EREGWR
Trigger: TCTCCATCCTTCCCTCTCCCAAAAGACATTTCTGAT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTACATACTCTATTGCCTaGAGCTGCACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPTYSIA*SCTTIQ
Trigger: TTGAATCGTTGTGCAGCTCCAGGCAATAGAGTATGT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATTACTACTAAAAATACGGAAATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTAAAGTTTCTGGTGCTTaGCTTTGCAGTGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ITTKNTEISQAWWRAAGFKVSGA*LCSVLL
Trigger: TAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTT...AAATCCAGCAGCACGCCACCATGCCTGGCTTATTTCCGTATTTTTAGTAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp CTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTACTAGGGTGGAAAGTTTCTaGTGCTTGGCTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LWSVHDDAECQLLNVFLTRVESF*CLALQC
Trigger: ACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCT...AGTAAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTAGAGAATCCAGGGTaGAAAGTTTCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVENPG*KVSGAW
Trigger: CCAAGCACCAGAAACTTTCCACCCTGGATTCTCTAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACTGGGGCTCTGTCCATaGAGCAAAAGTAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLGLCP*SKSRES
Trigger: GGATTCTCTACTTTTGCTCCATGGACAGAGCCCCAG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAAGTGAGTCCTTTTaGGTTGTCCTCGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVQSESF*VVLGFR
Trigger: TCGGAAACCGAGGACAACCCAAAAGGACTCACTTTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CCA 90 bp ATCCATAAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATAGGTCACGGTCCCACTaGTCTCTAAAAACCACGATG +
Preference number: 4 (lower is better)
Translates to: IHKPLNGKQTHVKDFRMYRSRSH*SLKTTM
Trigger: CATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCT...ATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTTATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCCGTGTTCCAAGGATaGTCGTTTACCTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESVFQG*SFTSPE
Trigger: CTCAGGAGAGGTAAACGACCATCCTTGGAACACGGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATCTGGTTCATCTCTTTaGGCAGTTCCTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSGSSL*AVPLRH
Trigger: ATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCTGGTTCATCTCTTTaGGCAGTTCCTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSGSSL*AVPLRH
Trigger: ATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGCTATTTACAATGGATaGAATCATACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPAIYNG*NHTLGE
Trigger: CTCTCCCAGAGTATGATTTCATCCATTGTAAATAGC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGGCACTTGGTTGCTaGCACATTGGCATAATATGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLALGC*HIGIIC
Trigger: ACATATTATGCCAATGTGTCAGCAACCAAGTGCCAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVCQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 4 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGATGGAGATTTATTTaGGAGGGAGCCCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVGWRFI*EGAPLT
Trigger: AGTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAACTCCAGAGGTTACTaGGCAGCTAGAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSNSRGY*AARISL
Trigger: CAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTTCATATTTGGTAAATaGATTGGACGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAFIFGK*IGRWPR
Trigger: TCTGGGCCAGCGTCCAATGCATTTACCAAATATGAA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGTTGAATGCCACTCTTaGAAAGACAGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRVECHS*KDSLGH
Trigger: GTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAAC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGTTGAATGCCACTCTTaGAAAGACAGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPVECHS*KDSLGH
Trigger: GTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAAC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCCCTGACTTTTATTTaGAGCCACTTTGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVALTFI*SHFGKQ
Trigger: CTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCTATTGCCTGGAGCTaGACAACGATTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSIAWS*TTIQKQ
Trigger: CTGTTTTTGAATCGTTGTGCAGCTCCAGGCAATAGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGACCACAGGCTAAAATaGCCACAGATTCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKDHRLK*PQIHLE
Trigger: TTCTAAGTGAATCTGTGGGCATTTTAGCCTGTGGTC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAAAGGCGGGAAATTGTaGTTTGTCAAGAGGCACTAC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSKGGKL*FVKRHY
Trigger: GTAGTGCCTCTTGACAAAGCACAATTTCCCGCCTTT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTGGTGTCTTCTTCTGGTaGGGAGATGGTTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLGVFFW*GDGCYD
Trigger: ATCATAACAACCATCTCCGCACCAGAAGAAGACACC...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGTGGAAAGTTTCTGGTaGTTGGCTTTGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSVESFW*LALQCS
Trigger: AGAACACTGCAAAGCCAAGCACCAGAAACTTTCCAC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEAVSTS*LKSTSF
Trigger: GAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTTGGCTAATGTGCTCTaGTTCATCTCTTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNALANVL*FISLSS
Trigger: ACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGAGAGGGCATTCTTTaGCTAATGTGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVREGIL*LMCSGS
Trigger: TGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGATGAAATCATACTCTaGGAGAGAGGGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKDEIIL*ERGHSL
Trigger: CAAAGAATGCCCTCTCTCCCAGAGTATGATTTCATC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTGGTTGCTGACACATTaGCATAATATGTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSWLLTH*HNMCYL
Trigger: TAAATAGCACATATTATGCCAATGTGTCAGCAACCA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACAAACTCCTGGCACTTaGTTGCTGACACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPQTPGT*LLTHWH
Trigger: ATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEPRDAS*FIFGKC
Trigger: GCATTTACCAAATATGAACCAGCTGGCATCCCTGGG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATGTAATGCGGGCACTTaGTTTCGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKCNAGT*FRIGVL
Trigger: CAGTACTCCAATCCGAAACCAAGTGCCCGCATTACA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATGTAATGCGGGCACTTaGTTTCGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVECNAGT*FRIGVL
Trigger: CAGTACTCCAATCCGAAACCAAGTGCCCGCATTACA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTTATCAGATGGGCCATaGCTATTTGTTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPLSDGP*LFVALQ
Trigger: TTGTAAGGCAACAAATAGCCATGGCCCATCTGATAA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTTATCAGATGGGCCATaGCTATTTGTTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLSDGP*LFVALQ
Trigger: TTGTAAGGCAACAAATAGCCATGGCCCATCTGATAA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCTAACGGCAATCTGTTaGTTTATCAGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLTAIC*FIRWAM
Trigger: CATGGCCCATCTGATAAACCAACAGATTGCCGTTAG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTAACGGCAATCTGTTaGTTTATCAGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLTAIC*FIRWAM
Trigger: CATGGCCCATCTGATAAACCAACAGATTGCCGTTAG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTAACGGCAATCTGTTaGTTTATCAGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLTAIC*FIRWAM
Trigger: CATGGCCCATCTGATAAACCAACAGATTGCCGTTAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTATTTGCAGCCACTTTaGCAAACAGGGCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVYLQPL*QTGLET
Trigger: TGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSSHYL*SISAGA
Trigger: AGCACCTGCCGAAATTGACCAGAGATAATGTGAACT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNASSHYL*SISAGA
Trigger: AGCACCTGCCGAAATTGACCAGAGATAATGTGAACT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTACATACTCTATTGCCTaGAGCTGCACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNATYSIA*SCTTIQ
Trigger: TTGAATCGTTGTGCAGCTCCAGGCAATAGAGTATGT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAAAAATCCAACCATGTaGGACTGTTTAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVKNPTM*DCLMAS
Trigger: ACTGGCCATTAAACAGTCCCACATGGTTGGATTTTT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATTCTTTTCCCACAAAATGAAATAAGCCAGGCATaGTGGCGTGCTGCTGGATTT +
Preference number: 4 (lower is better)
Translates to: NFQLLLSSYKPLILFPQNEISQA*WRAAGF
Trigger: AAATCCAGCAGCACGCCACCATGCCTGGCTTATTTC...ATTTTGTGGGAAAAGAATTAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCTGGTTCATCTCTTTaGGCAGTTCCTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSGSSL*AVPLRH
Trigger: ATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCTATTTACAATGGATaGAATCATACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHAIYNG*NHTLGE
Trigger: CTCTCCCAGAGTATGATTTCATCCATTGTAAATAGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACTGGCACTTGGTTGCTaGCACATTGGCATAATATGT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLALGC*HIGIIC
Trigger: ACATATTATGCCAATGTGTCAGCAACCAAGTGCCAG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTACAGGCCTACATCATaGATAAAGCTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVYRPTS*IKLWRI
Trigger: GATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATACAGGCCTACATCATaGATAAAGCTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSYRPTS*IKLWRI
Trigger: GATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATGCCAAGGCGATGTCTaGTTCGGAAATACTGAACTT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVECQGDV*FGNTEL
Trigger: AAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCACAGTAATGACAAATTaGATAACGGAACGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVTVMTN*ITERSK
Trigger: CTTGCTACGTTCCGTTATTCAATTTGTCATTACTGT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAACTCCAGAGGTTACTaGGCAGCTAGAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRNSRGY*AARISL
Trigger: CAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTACTTCTTAGTCCTTaGTTTCGAAGGCCCCAATTA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVLLSP*FRRPQL
Trigger: TAATTGGGGCCTTCGAAATCAAGGACTAAGAAGTAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTCATATTTGGTAAATaGATTGGACGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVFIFGK*IGRWPR
Trigger: TCTGGGCCAGCGTCCAATGCATTTACCAAATATGAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGATTGAGGAAATTCTaGATGGCCCTCAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRLRKF*MALRFT
Trigger: AGTAAACCTGAGGGCCATGCAGAATTTCCTCAATCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGATTGAGGAAATTCTaGATGGCCCTCAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRLRKF*MALRFT
Trigger: AGTAAACCTGAGGGCCATGCAGAATTTCCTCAATCT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGCCCTGACTTTTATTTaGAGCCACTTTGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRALTFI*SHFGKQ
Trigger: CTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCCCTGACTTTTATTTaGAGCCACTTTGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEALTFI*SHFGKQ
Trigger: CTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCTATTCTTTCGGATTaGAAAGTCTCTGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSILSD*KVSVPC
Trigger: GCATGGGACAGAGACTTTGCAATCCGAAAGAATAGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAATTACCCATTAAGCTaGCAGATAGGAAGCCATAGA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHNYPLS*QIGSHR
Trigger: TCTATGGCTTCCTATCTGGCAGCTTAATGGGTAATT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAATTACCCATTAAGCTaGCAGATAGGAAGCCATAGA +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNANYPLS*QIGSHR
Trigger: TCTATGGCTTCCTATCTGGCAGCTTAATGGGTAATT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTATTGCCTGGAGCTaGACAACGATTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSIAWS*TTIQKQ
Trigger: CTGTTTTTGAATCGTTGTGCAGCTCCAGGCAATAGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACTTCACATACTCTATTaGCTGGAGCTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLHILY*LELHND
Trigger: ATCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACTTCACATACTCTATTaGCTGGAGCTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELHILY*LELHND
Trigger: ATCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPSTIVD*SFNAHP
Trigger: GGGATGAGCATTAAAGCTGCAATCTACTATAGTACT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAAAGGCGGGAAATTGTaGTTTGTCAAGAGGCACTAC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPKGGKL*FVKRHY
Trigger: GTAGTGCCTCTTGACAAAGCACAATTTCCCGCCTTT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAAAGGCGGGAAATTGTaGTTTGTCAAGAGGCACTAC +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKKGGKL*FVKRHY
Trigger: GTAGTGCCTCTTGACAAAGCACAATTTCCCGCCTTT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGGCTAATGTGCTCTaGTTCATCTCTTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLANVL*FISLSS
Trigger: ACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGAGAGGGCATTCTTTaGCTAATGTGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKREGIL*LMCSGS
Trigger: TGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGAGAGGGCATTCTTTaGCTAATGTGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEREGIL*LMCSGS
Trigger: TGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGATGAAATCATACTCTaGGAGAGAGGGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSDEIIL*ERGHSL
Trigger: CAAAGAATGCCCTCTCTCCCAGAGTATGATTTCATC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELPYKL*TKLGRK
Trigger: CTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELLVDI*RDFHGR
Trigger: TCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAATCTCGCTCCACTTCTaGCAGATTGAGGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEISLHF*QIEEIL
Trigger: CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGAT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATATTTGCAGCCACTTTaGCAAACAGGGCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKYLQPL*QTGLET
Trigger: TGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSSHYL*SISAGA
Trigger: AGCACCTGCCGAAATTGACCAGAGATAATGTGAACT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAATCAGAAATGTCTTTTaGGAGAGGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSIRNVF*EREGWR
Trigger: TCTCCATCCTTCCCTCTCCCAAAAGACATTTCTGAT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAAGCCGAAAGAGATCTaGAGTACTATAGTAGATTGC +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKKPKEI*STIVDC
Trigger: GCAATCTACTATAGTACTCCAGATCTCTTTCGGCTT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAAAGTTTCTGGTGCTTaGCTTTGCAGTGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSKVSGA*LCSVLL
Trigger: TAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGCTATTTACAATGGATaGAATCATACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSAIYNG*NHTLGE
Trigger: CTCTCCCAGAGTATGATTTCATCCATTGTAAATAGC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCTATTTACAATGGATaGAATCATACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVAIYNG*NHTLGE
Trigger: CTCTCCCAGAGTATGATTTCATCCATTGTAAATAGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR TCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATACAGGCCTACATCATaGATAAAGCTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEYRPTS*IKLWRI
Trigger: GATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR TCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACTGATTCGGAAATACTaGACTTATTCAGTCTATAGG +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLIRKY*TYSVYR
Trigger: CCTATAGACTGAATAAGTTCAGTATTTCCGAATCAG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAGAGGAAGCCCAAAGTaGAGCAGAAATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPRGSPK*SRNQKC
Trigger: ACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTTGCTTTAATGTAACCTaGCCCACGGTTATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLCFNVT*PTVISE
Trigger: TTCACTAATAACCGTGGGTCAGGTTACATTAAAGCA...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp AAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATTTTGGGGAATGTAGAAGAAAATaGCCTCTCAAAGTAGCTTCG +
Preference number: 4 (lower is better)
Translates to: KPLNGKQTHVKDFRMYFGECRRK*PLKVAS
Trigger: CGAAGCTACTTTGAGAGGTCATTTTCTTCTACATTC...CCCAAAATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp GCCCAATTTGTCTTTTTGAACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAGTGCTAAAGCTCCAGTaGTTTTCAATATGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: AQFVFLNFQLLLSSYKPLVLKLQ*FSIWAK
Trigger: TTTAGCCCATATTGAAAATCACTGGAGCTTTAGCAC...TAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTCAAAATGACTTCACATaGAACACTGCTCGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLQNDFT*NTARAK
Trigger: TTTAGCACGAGCAGTGTTTCATGTGAAGTCATTTTG...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTCATATTTGGTAAATaGATTGGACGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEFIFGK*IGRWPR
Trigger: TCTGGGCCAGCGTCCAATGCATTTACCAAATATGAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGATTGAGGAAATTCTaGATGGCCCTCAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKRLRKF*MALRFT
Trigger: AGTAAACCTGAGGGCCATGCAGAATTTCCTCAATCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAGATTGAGGAAATTCTaGATGGCCCTCAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPRLRKF*MALRFT
Trigger: AGTAAACCTGAGGGCCATGCAGAATTTCCTCAATCT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKTDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHTDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATCTATTCTTTCGGATTaGAAAGTCTCTGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPSILSD*KVSVPC
Trigger: GCATGGGACAGAGACTTTGCAATCCGAAAGAATAGA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAATTACCCATTAAGCTaGCAGATAGGAAGCCATAGA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVNYPLS*QIGSHR
Trigger: TCTATGGCTTCCTATCTGGCAGCTTAATGGGTAATT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCTATTGCCTGGAGCTaGACAACGATTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESIAWS*TTIQKQ
Trigger: CTGTTTTTGAATCGTTGTGCAGCTCCAGGCAATAGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNASTIVD*SFNAHP
Trigger: GGGATGAGCATTAAAGCTGCAATCTACTATAGTACT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGAATTAGCTTGTATTaGAACATGTCTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHRISLY*NMSSPC
Trigger: ACAGGGAGAAGACATGTTGCAATACAAGCTAATTCT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAGTAATTGGGTTTGTTaGTTACCTAAGCTCGAGTTC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSNWVC*LPKLEF
Trigger: GAACTCGAGCTTAGGTAACCAACAAACCCAATTACT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTGGCTAATGTGCTCTaGTTCATCTCTTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELANVL*FISLSS
Trigger: ACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGATGAAATCATACTCTaGGAGAGAGGGCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEDEIIL*ERGHSL
Trigger: CAAAGAATGCCCTCTCTCCCAGAGTATGATTTCATC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTTGGTTGCTGACACATTaGCATAATATGTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPWLLTH*HNMCYL
Trigger: TAAATAGCACATATTATGCCAATGTGTCAGCAACCA...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACACTTGGTTTCGGATTaGAGTACTGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPHLVSD*STVVNL
Trigger: CAAATTCACCACAGTACTCCAATCCGAAACCAAGTG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRSSHYL*SISAGA
Trigger: AGCACCTGCCGAAATTGACCAGAGATAATGTGAACT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAAAGCAGAAAATCCTTaGACCGATGTATTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVKAENP*TDVLLC
Trigger: GCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATCAGAAATGTCTTTTaGGAGAGGGAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRIRNVF*EREGWR
Trigger: TCTCCATCCTTCCCTCTCCCAAAAGACATTTCTGAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAACATACTCTATTGCCTaGAGCTGCACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPTYSIA*SCTTIQ
Trigger: TTGAATCGTTGTGCAGCTCCAGGCAATAGAGTATGT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAAGCCGAAAGAGATCTaGAGTACTATAGTAGATTGC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSKPKEI*STIVDC
Trigger: GCAATCTACTATAGTACTCCAGATCTCTTTCGGCTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAAAAATCCAACCATGTaGGACTGTTTAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSKNPTM*DCLMAS
Trigger: ACTGGCCATTAAACAGTCCCACATGGTTGGATTTTT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAAAAATCCAACCATGTaGGACTGTTTAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSKNPTM*DCLMAS
Trigger: ACTGGCCATTAAACAGTCCCACATGGTTGGATTTTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAAAGTTTCTGGTGCTTaGCTTTGCAGTGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRKVSGA*LCSVLL
Trigger: TAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CCA 90 bp GCCCAATTTGTCTTTTTGAACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTACAGGGGCACTCAAAATaGCTATTGGAATTATCCAAA +
Preference number: 4 (lower is better)
Translates to: AQFVFLNFQLLLSSYKPLQGHSK*LLELSK
Trigger: TTTGGATAATTCCAATAGCCATTTTGAGTGCCCCTG...TAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTGATTCGGAAATACTaGACTTATTCAGTCTATAGG +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLIRKY*TYSVYR
Trigger: CCTATAGACTGAATAAGTTCAGTATTTCCGAATCAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTACAGTAATGACAAATTaGATAACGGAACGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSTVMTN*ITERSK
Trigger: CTTGCTACGTTCCGTTATTCAATTTGTCATTACTGT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVTDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATATAGGTGTATCCTGTaGAACAAAGAAATGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKYRCIL*NKEMSK
Trigger: TTTGGACATTTCTTTGTTGCACAGGATACACCTATA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTATAGGTGTATCCTGTaGAACAAAGAAATGTCCAAA +
Preference number: 4 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHYRCIL*NKEMSK
Trigger: TTTGGACATTTCTTTGTTGCACAGGATACACCTATA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGTAACTTCCGTTAAGTaGAAGGATAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKVTSVK*KDNEGR
Trigger: TCTGCCTTCATTATCCTTGCACTTAACGGAAGTTAC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAATTACCCATTAAGCTaGCAGATAGGAAGCCATAGA +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPNYPLS*QIGSHR
Trigger: TCTATGGCTTCCTATCTGGCAGCTTAATGGGTAATT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGTACTATAGTAGATTaGAGCTTTAATGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSTIVD*SFNAHP
Trigger: GGGATGAGCATTAAAGCTGCAATCTACTATAGTACT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGAATTAGCTTGTATTaGAACATGTCTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRISLY*NMSSPC
Trigger: ACAGGGAGAAGACATGTTGCAATACAAGCTAATTCT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATTATCAGATGGGCCATaGCTATTTGTTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLSDGP*LFVALQ
Trigger: TTGTAAGGCAACAAATAGCCATGGCCCATCTGATAA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTATCAGATGGGCCATaGCTATTTGTTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELSDGP*LFVALQ
Trigger: TTGTAAGGCAACAAATAGCCATGGCCCATCTGATAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAAGCCGAAAGAGATCTaGAGTACTATAGTAGATTGC +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEKPKEI*STIVDC
Trigger: GCAATCTACTATAGTACTCCAGATCTCTTTCGGCTT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAAAAATCCAACCATGTaGGACTGTTTAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEKNPTM*DCLMAS
Trigger: ACTGGCCATTAAACAGTCCCACATGGTTGGATTTTT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACTGATTCGGAAATACTaGACTTATTCAGTCTATAGG +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLIRKY*TYSVYR
Trigger: CCTATAGACTGAATAAGTTCAGTATTTCCGAATCAG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR TCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAATGTGGCTCATACTATaGATTCCATATGTCCAATGT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKMWLIL*IPYVQC
Trigger: ACATTGGACATATGGAATTCATAGTATGAGCCACAT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVETDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRTDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATT +
Preference number: 4 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPTDVLL*LVEVHI
Trigger: AATGTGAACTTCTACTAGGCAAAGCAATACATCGGT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: NESRKSLDRCIALPSRSSHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAGAATTAGCTTGTATTaGAACATGTCTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NRHICIVIRKDLARPQAKRISLY*NMSSPC
Trigger: ACAGGGAGAAGACATGTTGCAATACAAGCTAATTCT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp GCCCAATTTGTCTTTTTGAACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATCCAAAAATTCAATTaGCCAGAGTGGATATCCTTA +
Preference number: 4 (lower is better)
Translates to: AQFVFLNFQLLLSSYKPLIQKFN*PEWISL
Trigger: TAAGGATATCCACTCTGGGCAATTGAATTTTTGGAT...TAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CCA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGGTTGCTGACACATTaGCATAATATGTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVWLLTH*HNMCYL
Trigger: TAAATAGCACATATTATGCCAATGTGTCAGCAACCA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CCA 90 bp ATCCATAAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATAACCATCTTCCTGAATaGCTGTTTACTATAGGTCTA +
Preference number: 4 (lower is better)
Translates to: IHKPLNGKQTHVKDFRMYNHLPE*LFTIGL
Trigger: TAGACCTATAGTAAACAGCCATTCAGGAAGATGGTT...ATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTTATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR GCA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATATAGGTGTATCCTGTaGAACAAAGAAATGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEYRCIL*NKEMSK
Trigger: TTTGGACATTTCTTTGTTGCACAGGATACACCTATA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR GCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACATTTGATCAAGACTTaGACTAGTGGACAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRHLIKT*TSGQSF
Trigger: AAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CCA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATGGTTGCTGACACATTaGCATAATATGTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRWLLTH*HNMCYL
Trigger: TAAATAGCACATATTATGCCAATGTGTCAGCAACCA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
3UTR CAA 72 bp ACTATGAATTCCATATGTCCAATGTCAAAATGTCATTaGATCAAGACTTGCACTAGTGGACAAAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TMNSICPMSKCH*IKTCTSGQSFL
Trigger: GAGAAAACTTTGTCCACTAGTGCAAGTCTTGATCAAATGACATTTTGACATTGGACATATGGAATTCATAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS CCA 90 bp GCTGAGAACCCGGAGGCGGCGGCGGCGGCGGCGAGCCGGGGCTGCTaGTTCGCAGGGCGGCTAGCTCGCGAGGAGGCGCGGCCAGAGCGG +
Preference number: 5 (lower is better)
Translates to: AENPEAAAAAASRGC*FAGRLAREEARPER
Trigger: CCGCTCTGGCCGCGCCTCCTCGCGAGCTAGCCGCCCTGCGAACCAGCAGCCCCGGCTCGCCGCCGCCGCCGCCGCCTCCGGGTTCTCAGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS CCA 90 bp CGGGTGGGTGCGTCTGGGCGCAGGCGGGCACCGGGGCCCAGGGTCTaGTCCTCCTCCTTGTGGCGGGTCCAGGGCGCGGCCGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: RVGASGRRRAPGPRV*SSSLWRVQGAAASP
Trigger: GGGCGAGGCGGCCGCGCCCTGGACCCGCCACAAGGAGGAGGACCAGACCCTGGGCCCCGGTGCCCGCCTGCGCCCAGACGCACCCACCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS GCA 90 bp AGGGCTGAGAACCCGGAGGCGGCGGCGGCGGCGGCGAGCCGGGGCTaGTGGTTCGCAGGGCGGCTAGCTCGCGAGGAGGCGCGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RAENPEAAAAAASRG*WFAGRLAREEARPE
Trigger: CTCTGGCCGCGCCTCCTCGCGAGCTAGCCGCCCTGCGAACCAGCAGCCCCGGCTCGCCGCCGCCGCCGCCGCCTCCGGGTTCTCAGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS GCA 90 bp CACTCGTCCCGGCGCGGAGGCGGCGGCGACAAGGCAGTCGCTGGGTaGCGCGTCTGCCGGCGGAGACGCAGACCGACGCGCAAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: HSSRRGGGGDKAVAG*RVCRRRRRPTRKRR
Trigger: TCGCCTCTTGCGCGTCGGTCTGCGTCTCCGCCGGCAGACGCGGCACCCAGCGACTGCCTTGTCGCCGCCGCCTCCGCGCCGGGACGAGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CCA 90 bp TGCGCCCGCCTTCGCCCCAAGTGCCCAGGACGGAGCGAGGGGCTGTaGGTCGGCGCAGGGACGCTGGCTGCTCACCTCCAGGAGCCGACA +
Preference number: 5 (lower is better)
Translates to: CARLRPKCPGRSEGL*VGAGTLAAHLQEPT
Trigger: TGTCGGCTCCTGGAGGTGAGCAGCCAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTCCGTCCTGGGCACTTGGGGCGAAGGCGGGCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS GCA 90 bp CCCAGGACGGAGCGAGGGGCTGTGGGTCGGCGCAGGGACGCTGGCTaGTCACCTCCAGGAGCCGACAGAAGGTGCCTTCGGCGTCACGCG +
Preference number: 5 (lower is better)
Translates to: PRTERGAVGRRRDAG*SPPGADRRCLRRHA
Trigger: CGCGTGACGCCGAAGGCACCTTCTGTCGGCTCCTGGAGGTGAGCAGCCAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTCCGTCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS GCA 90 bp AGGAAGGGGAGAGTCGGCGGTCGGAGCGGGGTGACGAGGACCTCATaGACGAGGCGGCGAAGGACCGATGGCAGAGAACCGAGTGCGGCG +
Preference number: 5 (lower is better)
Translates to: RKGRVGGRSGVTRTS*TRRRRTDGREPSAA
Trigger: CGCCGCACTCGGTTCTCTGCCATCGGTCCTTCGCCGCCTCGTGCATGAGGTCCTCGTCACCCCGCTCCGACCGCCGACTCTCCCCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CCA 90 bp AGACAGGAATCATCAAACCTCCCACGGCCTTGGCCACGGCGCCGTTaGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTCTGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQESSNLPRPWPRRR*ASRGLPWGCRSAPA
Trigger: GGCTGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTTGATGATTCCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS GCA 90 bp GGTCGGGGCTGTCCCGCAGACACGGGCTCTCGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACAAAGTTCCCACCGGCAGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: GRGCPADTGSRSAAP*CSDSETKFPPAGRN
Trigger: ATTGCGACCTGCCGGTGGGAACTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCGAGAGCCCGTGTCTGCGGGACAGCCCCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS GCA 90 bp TCCTGGGTCCGGGTATCCCAGGGCATCCGGAGCTGGGGAGGGTTGTaGGGACTACCCAAGGCACGCGCAGATACCGGGCAGGGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SWVRVSQGIRSWGGL*GLPKARADTGQGRR
Trigger: CCTTCTTCCCTGCCCGGTATCTGCGCGTGCCTTGGGTAGTCCGCACAACCCTCCCCAGCTCCGGATGCCCTGGGATACCCGGACCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS GCA 90 bp CGGGGCTGTCCCGCAGACACGGGCTCTCGCTCCGCCGCTCCATGCTaGTCCGACTCGGAGACAAAGTTCCCACCGGCAGGTCGCAATAAA +
Preference number: 5 (lower is better)
Translates to: RGCPADTGSRSAAPC*SDSETKFPPAGRNK
Trigger: TTTATTGCGACCTGCCGGTGGGAACTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCGAGAGCCCGTGTCTGCGGGACAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 90 bp GAGGCTGAAAGAGCCTTTTCACACCTTCGGGAAGGAGACCCGTTCTaGAGAGAAAGGGCTGAGAACCCGGAGGCGGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: EAERAFSHLREGDPF*RERAENPEAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCCTCCGGGTTCTCAGCCCTTTCTCTCCAGAACGGGTCTCCTTCCCGAAGGTGTGAAAAGGCTCTTTCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAGGCTGAGACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: ISQAWWRAAGFPATPEAETGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...CTCAGCCTCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS TCA 90 bp ATCTGTTGTGTCAGAATCGGCGAGTGCAAAGTAGCTGCGCCCCGCTaGCGCGCTCTCTCCTGGGTCCGGGTATCCCAGGGCATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ICCVRIGECKVAAPR*RALSWVRVSQGIRS
Trigger: GCTCCGGATGCCCTGGGATACCCGGACCCAGGAGAGAGCGCGTCAGCGGGGCGCAGCTACTTTGCACTCGCCGATTCTGACACAACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS GCA 90 bp CGGCGCAGGGACGCTGGCTGCTCACCTCCAGGAGCCGACAGAAGGTaGCTTCGGCGTCACGCGTCCAACCCTGGGGCTGATTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: RRRDAGCSPPGADRR*LRRHASNPGADLNN
Trigger: GTTATTTAAATCAGCCCCAGGGTTGGACGCGTGACGCCGAAGGCACCTTCTGTCGGCTCCTGGAGGTGAGCAGCCAGCGTCCCTGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CAA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCAAACCTCCCACGGCCTaGGCCACGGCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSKPPTA*ATAPLG
Trigger: GCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTT...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 90 bp TCGGTGTCGAGGTTTTGGCCTGAGGGGTTCGGGAGGAGCTGGGACTaGTGGAGGCCGAGGAGACCATGCTCACATTGGGATTCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SVSRFWPEGFGRSWD*WRPRRPCSHWDSCS
Trigger: GGAGCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCTCCCGAACCCCTCAGGCCAAAACCTCGACACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS GCA 90 bp AGGCTGAGGTGGGAGGATCCCTTAAATCCAGGAGGCAGGGTTTGCTaGTCTCCAGCCTTGGGCCTGGGCCGCAGAGCTGTGAGAATACCC +
Preference number: 5 (lower is better)
Translates to: RLRWEDPLNPGGRVC*SPALGLGRRAVRIP
Trigger: GGGTATTCTCACAGCTCTGCGGCCCAGGCCCAAGGCTGGAGAGCAGCAAACCCTGCCTCCTGGATTTAAGGGATCCTCCCACCTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS CCA 90 bp GTGTCGAGGTTTTGGCCTGAGGGGTTCGGGAGGAGCTGGGACTGCTaGAGGCCGAGGAGACCATGCTCACATTGGGATTCATGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: VSRFWPEGFGRSWDC*RPRRPCSHWDSCSA
Trigger: AGCGGAGCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCTCCAGCAGTCCCAGCTCCTCCCGAACCCCTCAGGCCAAAACCTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS-3UTR CAA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCTGCTGCTCTCCAGCCTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSCCSPA*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGGCTGGAGAGCAGCA...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 90 bp CCAATTAACTATCTGTTGTGTCAGAATCGGCGAGTGCAAAGTAGCTaGGCCCCGCTGACGCGCTCTCTCCTGGGTCCGGGTATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PINYLLCQNRRVQSS*APLTRSLLGPGIPG
Trigger: CCCTGGGATACCCGGACCCAGGAGAGAGCGCGTCAGCGGGGCGCAGCTACTTTGCACTCGCCGATTCTGACACAACAGATAGTTAATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS GCA 90 bp TGGGACTGCTGGAGGCCGAGGAGACCATGCTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCTGGTAGATGCGATCTCGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: WDCWRPRRPCSHWDS*SAPSHPGRCDLAPL
Trigger: AAGTGGAGCGAGATCGCATCTACCAGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCTCCAGCAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS CCA 90 bp ACGGATGGTACAGAGGTTTTCCCAGAGGGTGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAGCAGTTCACACAGCCAGCCCTGACT +
Preference number: 5 (lower is better)
Translates to: TDGTEVFPEGAVFWA*VLLPAEQFTQPALT
Trigger: AGTCAGGGCTGGCTGTGTGAACTGCTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACCTCTGTACCATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS CCA 90 bp CACAACTGTCTTCAGTCGGAGGAGGTGGGGGAGGCGCTTCTTCTCTaGGAGGGGAACTCTCCTTGGCTGGCTGAGACTGCTGTCTATGAA +
Preference number: 5 (lower is better)
Translates to: HNCLQSEEVGEALLL*EGNSPWLAETAVYE
Trigger: TTCATAGACAGCAGTCTCAGCCAGCCAAGGAGAGTTCCCCTCCCAGAGAAGAAGCGCCTCCCCCACCTCCTCCGACTGAAGACAGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS GCA 90 bp GAAGGTTCAGGAAGCGACGGATGGTACAGAGGTTTTCCCAGAGGGTaGGGTTTTCTGGGCTTGGGTTCTCCTTCCAGCGGAGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: EGSGSDGWYRGFPRG*GFLGLGSPSSGAVH
Trigger: GTGAACTGCTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACCTCTGTACCATCCGTCGCTTCCTGAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATAAGCCAGGCATGGTGGCGTGCTGCTGGATTTCCAGCTACTCCGGAGGCTGAGAGGTGGGCATTTCACTaGAGGTCAGGAGTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: ISQAWWRAAGFPATPEAERWAFH*RSGVPD
Trigger: GTCTGGAACTCCTGACCTCAAGTGAAATGCCCACCT...CTCAGCCTCCGGAGTAGCTGGAAATCCAGCAGCACGCCACCATGCCTGGCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS TCA 90 bp GTTGCATGCGTTCGCTGTGGTGATGCCTTGACTCCTCCTCATAGATaGCATCCCTCTCATGCTGGGGAAGGTTCAGGAAGCGACGGATGG +
Preference number: 5 (lower is better)
Translates to: VACVRCGDALTPPHR*HPSHAGEGSGSDGW
Trigger: CCATCCGTCGCTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGTCAAGGCATCACCACAGCGAACGCATGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS TCA 90 bp GGGAAGCTGGACCACGTGTTGCATGCGTTCGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGACATCCCTCTCATGCTGGGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GKLDHVLHAFAVVMP*LLLIDDIPLMLGKV
Trigger: AACCTTCCCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGTCAAGGCATCACCACAGCGAACGCATGCAACACGTGGTCCAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 90 bp CACGGAAGAGTTGGTTGGCTCTGGCTTAACTGCTCTGGGGATGGGTaGATGGTTCAGGAACTGCTGGTTGATGGCTTGAGGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HGRVGWLWLNCSGDG*MVQELLVDGLRMLV
Trigger: CACCAGCATCCTCAAGCCATCAACCAGCAGTTCCTGAACCATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 90 bp ACGCGCAGATACCGGGCAGGGAAGAAGGGCTCCGTGTTCCAAGGATaGTCGTTTACCTCTCCTGAGATCAGCCCTAATCCCTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: TRRYRAGKKGSVFQG*SFTSPEISPNPLVT
Trigger: AGTTACCAAGGGATTAGGGCTGATCTCAGGAGAGGTAAACGACCATCCTTGGAACACGGAGCCCTTCTTCCCTGCCCGGTATCTGCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVTGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCTGTAATCCCAGTACTTaGGGAGGCCGAGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSCNPST*GGRGGH
Trigger: ATGCCCACCTCGGCCTCCCAAAGTACTGGGATTACA...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 90 bp ATCTGGAGAGACTTCCACGGAAGAGTTGGTTGGCTCTGGCTTAACTaGTCTGGGGATGGGTGGATGGTTCAGGAACTGCTGGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: IWRDFHGRVGWLWLN*SGDGWMVQELLVDG
Trigger: GCCATCAACCAGCAGTTCCTGAACCATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGTCTCTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 90 bp GGGGAGATCCAGCTGAGCCGAAAGAGTGTGGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATGAATAAAGCTTTGGAGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: GEIQLSRKSVDGFLV*VQAYIMNKALEDPQ
Trigger: CTGGGGATCCTCCAAAGCTTTATTCATGATGTAGGCCTGTACCCAGACCAGGAAGCCATCCACACTCTTTCGGCTCAGCTGGATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 90 bp CTGGTAGATATCTGGAGAGACTTCCACGGAAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGATGGGTGGATGGTTCAGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LVDIWRDFHGRVGWL*LNCSGDGWMVQELL
Trigger: CAGCAGTTCCTGAACCATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGTCTCTCCAGATATCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVTGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSTGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAAACCTCCCACGGCCTaGGCCACGGCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHKPPTA*ATAPLG
Trigger: GCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 90 bp AGATGGGCCATGGCTATTTGTTGCCTTACAAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGGCTCATGATGGGCTGTAATGCGGGC +
Preference number: 5 (lower is better)
Translates to: RWAMAICCLTSCGLS*GERRPGLMMGCNAG
Trigger: GCCCGCATTACAGCCCATCATGAGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 90 bp CACACTGGCCCTCTTCAGCTCATCTCTGACTTGCTGGTAGATATCTaGAGAGACTTCCACGGAAGAGTTGGTTGGCTCTGGCTTAACTGC +
Preference number: 5 (lower is better)
Translates to: HTGPLQLISDLLVDI*RDFHGRVGWLWLNC
Trigger: GCAGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGTCTCTCCAGATATCTACCAGCAAGTCAGAGATGAGCTGAAGAGGGCCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAACTGGGGGAGGCCCCTaGACGTCCGGGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPTGGGP*TSGLPL
Trigger: GAGCGGCAGCCCGGACGTCAAGGGGCCTCCCCCAGT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAAACCTCCCACGGCCTaGGCCACGGCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVKPPTA*ATAPLG
Trigger: GCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGTCTGGTCCTCCTCCTaGTGGCGGGTCCAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSVWSSS*WRVQGA
Trigger: CGCGCCCTGGACCCGCCACAAGGAGGAGGACCAGAC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATTCCTCCCACGGCCTaGGCCACGGCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSIPPTA*ATAPLG
Trigger: GCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGAAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS GCA 90 bp TCGGCGTGTTCTTCTCTGTTGTCATATTCAAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACAGGAATCATCAAACCTCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SACSSLLSYSREPSN*STTQKTGIIKPPTA
Trigger: GGCCGTGGGAGGTTTGATGATTCCTGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCTTGAATATGACAACAGAGAAGAACACGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAAACCTCCCACGGCCTaGGCCACGGCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEKPPTA*ATAPLG
Trigger: GCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTTCCACTCTTTCCACTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSFHSFH*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGTGGAAAGAGTGGAA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614512.4
CDS TCA 90 bp GGGAGAGAGGGCATTCTTTGGCTAATGTGCTCTGGTTCATCTCTTTaGGCAGTTCCTTTAAGGCATTGCGGACTGTGGCATGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: GREGILWLMCSGSSL*AVPLRHCGLWHGST
Trigger: AGTGGAACCATGCCACAGTCCGCAATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSCGFLG*GSPSSG
Trigger: TCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCGGAGCTGGGGAGGGTaGTGCGGACTACCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRSWGG*CGLPKA
Trigger: TGCCTTGGGTAGTCCGCACAACCCTCCCCAGCTCCG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS GCA 90 bp GCAAAAGTAGAGAATCCAGGGTGGAAAGTTTCTGGTGCTTGGCTTTaGAGTGTTCTCCTAGTCTTCCTCTTTACTCCTTCCCCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: AKVENPGWKVSGAWL*SVLLVFLFTPSPSL
Trigger: GAGGGAAGGGGAAGGAGTAAAGAGGAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCTGGATTCTCTACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417098.6
ENST00000440919.1
ENST00000443023.5
CDS CCA 90 bp TTGGTTTATCAGATGGGCCATGGCTATTTGTTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAGAAGACCAGGGCTCATGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LVYQMGHGYLLPYKL*TKLGRKKTRAHDGL
Trigger: CAGCCCATCATGAGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 90 bp TGTCCATTTCTGAGTCCAACCTCAGACTTACTCAATCAGAAACTATaGGATGAGGCCCAGCAGTCTGTGTTTCACAGCCCTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: CPFLSPTSDLLNQKL*DEAQQSVFHSPPGD
Trigger: ATCACCTGGAGGGCTGTGAAACACAGACTGCTGGGCCTCATCCCATAGTTTCTGATTGAGTAAGTCTGAGGTTGGACTCAGAAATGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCAGCTTGATTATTCCTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVQLDYS*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCTG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000417098.6
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCAGCTTGATTATTCCTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDQLDYS*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCTG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000417098.6
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDCGFLG*GSPSSG
Trigger: TCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCCCAATTTGTCTTTTTGAACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTATCCAGGAGGCAGGGTTaGCTGCTCTCCAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: AQFVFLNFQLLLSSYKPLSRRQG*LLSSLG
Trigger: CCCAAGGCTGGAGAGCAGCAAACCCTGCCTCCTGGA...TAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTTCAAAAAGACAAATTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 90 bp TTGAGCAGTTCCTTTAAGGCATTGCGGACTGTGGCATGGTTCCACTaGTCCGCAGGCAAGTCTTCCAACTTTGAACAACTTTGTAATTGG +
Preference number: 5 (lower is better)
Translates to: LSSSFKALRTVAWFH*SAGKSSNFEQLCNW
Trigger: CCAATTACAAAGTTGTTCAAAGTTGGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCTTAAAGGAACTGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGTTCCTTTAAGGCATaGCGGACTGTGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSSSFKA*RTVAWF
Trigger: GAACCATGCCACAGTCCGCAATGCCTTAAAGGAACT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTACTTCCACGGAAGAGTaGGTTGGCTCTGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSTSTEE*VGSGLT
Trigger: AGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGAGACCATGCTCACATaGGGATTCATGCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDETMLT*GFMLRS
Trigger: GGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGAGACCATGCTCACATaGGGATTCATGCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPETMLT*GFMLRS
Trigger: GGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAAGCTGGACCACGTGTaGCATGCGTTCGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAKLDHV*HAFAVV
Trigger: CACCACAGCGAACGCATGCAACACGTGGTCCAGCTT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCGAGACCGGGGCTTTTaGGCACAACTGTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDRDRGF*AQLSSV
Trigger: GACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTCG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTCCTCAGCCTCCACTTaGTACATCTCCTCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVSSAST*YISSEP
Trigger: AGGCTCCGAGGAGATGTACAAAGTGGAGGCTGAGGA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATTCCACTCTTTCCACTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSFHSFH*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGTGGAAAGAGTGGAA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428695.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGGAGGTCACGGTCCCACTGGTCTCTAAAAACCACGATGTCCTCAGAGAGGAGCAAAGCTGACTTTACTTaGTATAAGTCTTTAGGCACC +
Preference number: 5 (lower is better)
Translates to: RRSRSHWSLKTTMSSERSKADFT*YKSLGT
Trigger: GGTGCCTAAAGACTTATACAAAGTAAAGTCAGCTTT...GCTCCTCTCTGAGGACATCGTGGTTTTTAGAGACCAGTGGGACCGTGACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS CCA 90 bp GAAATCATACTCTGGGAGAGAGGGCATTCTTTGGCTAATGTGCTCTaGTTCATCTCTTTGAGCAGTTCCTTTAAGGCATTGCGGACTGTG +
Preference number: 5 (lower is better)
Translates to: EIILWERGHSLANVL*FISLSSSFKALRTV
Trigger: CACAGTCCGCAATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTCCCAGAGTATGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSMGHGY*LPYKLW
Trigger: CCACAACTTGTAAGGCAACAAATAGCCATGGCCCAT...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDSCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAATCCCTGTGTGCGGTaGAATGCCACTCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSNPCVR*NATLAK
Trigger: CTTTGCAAGAGTGGCATTCAACCGCACACAGGGATT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTCCACTTCTGGCAGATaGAGGAAATTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSSTSGR*RKFCMA
Trigger: GGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGGA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAGACCATGCTCACATaGGGATTCATGCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHETMLT*GFMLRS
Trigger: GGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSFGKQG*RHLGPF
Trigger: AAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSCGFLG*GSPSSG
Trigger: TCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVCGFLG*GSPSSG
Trigger: TCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAAGCTGGACCACGTGTaGCATGCGTTCGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVKLDHV*HAFAVV
Trigger: CACCACAGCGAACGCATGCAACACGTGGTCCAGCTT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAAGCTGGACCACGTGTaGCATGCGTTCGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSKLDHV*HAFAVV
Trigger: CACCACAGCGAACGCATGCAACACGTGGTCCAGCTT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATCCTCAGCCTCCACTTaGTACATCTCCTCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSSAST*YISSEP
Trigger: AGGCTCCGAGGAGATGTACAAAGTGGAGGCTGAGGA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGCGGGAAATTGTGCTTaGTCAAGAGGCACTACAAGA +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSAGNCA*SRGTTR
Trigger: TCTTGTAGTGCCTCTTGACAAAGCACAATTTCCCGC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGGAGTACTTTCGACTTaGGAGATAGGAGGGCGATCG +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPGVLST*EIGGRS
Trigger: CGATCGCCCTCCTATCTCCAAAGTCGAAAGTACTCC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACAGCTTGATTATTCCTaGGGCCTGGGCCGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEQLDYS*GLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGGAATAATCAAGCTG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTCCACCTTCCCAGCTaGATTATTCCTTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHFHLPS*IIPWAW
Trigger: CCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGAA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGAGAGAGGGCATTCTTaGGCTAATGTGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDERGHS*ANVLWF
Trigger: GAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCAAACTCCTGGCACTaGGTTGCTGACACATTGGCA +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPNSWH*VADTLA
Trigger: TGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCACTTCCACGGAAGAGTaGGTTGGCTCTGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVTSTEE*VGSGLT
Trigger: AGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTAATCCCTGTGTGCGGTaGAATGCCACTCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPNPCVR*NATLAK
Trigger: CTTTGCAAGAGTGGCATTCAACCGCACACAGGGATT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTCCACTTCTGGCAGATaGAGGAAATTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVSTSGR*RKFCMA
Trigger: GGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGGA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGAGACCATGCTCACATaGGGATTCATGCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVETMLT*GFMLRS
Trigger: GGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGCTGTGATGTTGATGTaGGCGCCGTCCACCTTAATA +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDAVMLM*APSTLI
Trigger: TATTAAGGTGGACGGCGCCAACATCAACATCACAGC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAATGGCAGCTGTGATGTaGATGTTGGCGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEMAAVM*MLAPST
Trigger: GGTGGACGGCGCCAACATCAACATCACAGCTGCCAT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAAGCTGGACCACGTGTaGCATGCGTTCGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEKLDHV*HAFAVV
Trigger: CACCACAGCGAACGCATGCAACACGTGGTCCAGCTT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAAAGCTGGACCACGTGTaGCATGCGTTCGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKKLDHV*HAFAVV
Trigger: CACCACAGCGAACGCATGCAACACGTGGTCCAGCTT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCGAGACCGGGGCTTTTaGGCACAACTGTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRDRGF*AQLSSV
Trigger: GACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTCG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCGAGACCGGGGCTTTTaGGCACAACTGTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVRDRGF*AQLSSV
Trigger: GACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTCG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAGACCGGGGCTTTTaGGCACAACTGTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSRDRGF*AQLSSV
Trigger: GACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTCG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCCTCAGCCTCCACTTaGTACATCTCCTCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSSAST*YISSEP
Trigger: AGGCTCCGAGGAGATGTACAAAGTGGAGGCTGAGGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS CCA 90 bp TTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCTGCCTTGCTTTTGTCAGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: LDRCIALPSRSSHYL*SISAGAALLLSAFS
Trigger: GGAAAATGCTGACAAAAGCAAGGCAGCACCTGCCGAAATTGACCAGAGATAATGTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAAACGCACAGGGACCTaGATGTTGAACTGCGAATCC +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKKRTGT*MLNCES
Trigger: GGATTCGCAGTTCAACATCAAGGTCCCTGTGCGTTT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAAACGCACAGGGACCTaGATGTTGAACTGCGAATCC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHKRTGT*MLNCES
Trigger: GGATTCGCAGTTCAACATCAAGGTCCCTGTGCGTTT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCCACCTTCCCAGCTaGATTATTCCTTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSFHLPS*IIPWAW
Trigger: CCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTCCACCTTCCCAGCTaGATTATTCCTTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVFHLPS*IIPWAW
Trigger: CCAGGCCCAAGGAATAATCAAGCTGGGAAGGTGGAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000457245.5
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAGTTCCTTTAAGGCATaGCGGACTGTGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHSSFKA*RTVAWF
Trigger: GAACCATGCCACAGTCCGCAATGCCTTAAAGGAACT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAGTTCCTTTAAGGCATaGCGGACTGTGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKSSFKA*RTVAWF
Trigger: GAACCATGCCACAGTCCGCAATGCCTTAAAGGAACT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGAGAGAGGGCATTCTTaGGCTAATGTGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAERGHS*ANVLWF
Trigger: GAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGAGAGAGGGCATTCTTaGGCTAATGTGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHERGHS*ANVLWF
Trigger: GAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCACTCCTGGCACTTGGTaGCTGACACATTGGCATAAT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVTPGTW*LTHWHN
Trigger: ATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATACTCCTGGCACTTGGTaGCTGACACATTGGCATAAT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDTPGTW*LTHWHN
Trigger: ATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGT...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCCAAACTCCTGGCACTaGGTTGCTGACACATTGGCA +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSPNSWH*VADTLA
Trigger: TGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCAGTACTGTGGTGAATTaGGCTGTGAGGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVSTVVN*AVRRLF
Trigger: GAACAGTCTCCTCACAGCCAAATTCACCACAGTACT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTGCACTTGGTTTCGGATaGGAGTACTGTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSALGFG*EYCGEF
Trigger: AAATTCACCACAGTACTCCAATCCGAAACCAAGTGC...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVANGNL*VYQMGH
Trigger: ATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACACTTCCACGGAAGAGTaGGTTGGCTCTGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHTSTEE*VGSGLT
Trigger: AGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGAGACCATGCTCACATaGGGATTCATGCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPETMLT*GFMLRS
Trigger: GGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGCTGTGATGTTGATGTaGGCGCCGTCCACCTTAATA +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKAVMLM*APSTLI
Trigger: TATTAAGGTGGACGGCGCCAACATCAACATCACAGC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAACGAGACCGGGGCTTTTaGGCACAACTGTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERDRGF*AQLSSV
Trigger: GACTGAAGACAGTTGTGCCAAAAAGCCCCGGTCTCG...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATCCTCAGCCTCCACTTaGTACATCTCCTCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKSSAST*YISSEP
Trigger: AGGCTCCGAGGAGATGTACAAAGTGGAGGCTGAGGA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCCTCAGCCTCCACTTaGTACATCTCCTCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESSAST*YISSEP
Trigger: AGGCTCCGAGGAGATGTACAAAGTGGAGGCTGAGGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTTTTTCATCCTGGTACTaGCCTGATGTAACTTCCGTT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSFSSWY*PDVTSV
Trigger: AACGGAAGTTACATCAGGCAAGTACCAGGATGAAAA...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTAGGATGGAGATTTATTaGAGAGGGAGCCCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSRMEIY*RGSPFN
Trigger: GTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCCT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTCCACCTTGTAAGAGCTaGGCAAAATCAGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSPPCKS*AKSVSI
Trigger: AATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGG...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGAAAGTTTCTGGTGCTaGGCTTTGCAGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPESFWC*ALQCSP
Trigger: AGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATTCCACCTTCCCAGCTaGATTATTCCTCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPFHLPS*IIPPTA
Trigger: GGCCGTGGGAGGAATAATCAAGCTGGGAAGGTGGAA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAACSSL*SYSREP
Trigger: CGGCTCTCTTGAATATGACAACAGAGAAGAACACGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCTCTGGTTCATCTCTTaGAGCAGTTCCTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVLWFIS*SSSFKA
Trigger: TGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACCAAACTCCTGGCACTaGGTTGCTGACACATTGGCA +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRPNSWH*VADTLA
Trigger: TGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATCCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTAGTACTGTGGTGAATTaGGCTGTGAGGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNASTVVN*AVRRLF
Trigger: GAACAGTCTCCTCACAGCCAAATTCACCACAGTACT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGCACTTGGTTTCGGATaGGAGTACTGTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPALGFG*EYCGEF
Trigger: AAATTCACCACAGTACTCCAATCCGAAACCAAGTGC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTTTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNALLPYK*WTKLGR
Trigger: TCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAA...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHMGHGY*LPYKLW
Trigger: CCACAACTTGTAAGGCAACAAATAGCCATGGCCCAT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHANGNL*VYQMGH
Trigger: ATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAANGNL*VYQMGH
Trigger: ATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACTTCCACGGAAGAGTaGGTTGGCTCTGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTSTEE*VGSGLT
Trigger: AGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACAGCTCATCTCTGACTaGCTGGTAGATATCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKQLISD*LVDIWR
Trigger: TCTCCAGATATCTACCAGCAAGTCAGAGATGAGCTG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCAGCTCATCTCTGACTaGCTGGTAGATATCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAQLISD*LVDIWR
Trigger: TCTCCAGATATCTACCAGCAAGTCAGAGATGAGCTG...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESCKDS*GHTGPL
Trigger: AAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAATCCCTGTGTGCGGTaGAATGCCACTCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSNPCVR*NATLAK
Trigger: CTTTGCAAGAGTGGCATTCAACCGCACACAGGGATT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATCCACTTCTGGCAGATaGAGGAAATTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSTSGR*RKFCMA
Trigger: GGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGGA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTCCACTTCTGGCAGATaGAGGAAATTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVSTSGR*RKFCMA
Trigger: GGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGGA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGCTGTGATGTTGATGTaGGCGCCGTCCACCTTAATA +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSAVMLM*APSTLI
Trigger: TATTAAGGTGGACGGCGCCAACATCAACATCACAGC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCTGTGATGTTGATGTaGGCGCCGTCCACCTTAATA +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSAVMLM*APSTLI
Trigger: TATTAAGGTGGACGGCGCCAACATCAACATCACAGC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVFGKQG*RHLGPF
Trigger: AAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAA...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSFGKQG*RHLGPF
Trigger: AAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTTTTTCATCCTGGTACTaGCCTGATGTAACTTCCGTT +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSFSSWY*PDVTSV
Trigger: AACGGAAGTTACATCAGGCAAGTACCAGGATGAAAA...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCTTCACATACTCTATaGCCTGGAGCTGCACAACGA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVASHTL*PGAAQR
Trigger: TCGTTGTGCAGCTCCAGGCAATAGAGTATGTGAAGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACGTTCACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTGCAGCTAGAATTAGCTaGTATTGCAACATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TFTRPVLNVRSPLAITVSAARIS*YCNMSS
Trigger: AGAAGACATGTTGCAATACAAGCTAATTCTAGCTGC...ACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGTGAACGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCGGGAAATTGTGCTTaGTCAAGAGGCACTACAAGA +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHAGNCA*SRGTTR
Trigger: TCTTGTAGTGCCTCTTGACAAAGCACAATTTCCCGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGTGAGTCCTTTTGGGTaGTCCTCGGTTTCCGATTTC +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVVSPFG*SSVSDF
Trigger: GAAATCGGAAACCGAGGACAACCCAAAAGGACTCAC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS-3UTR CAA 90 bp AACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATTCTTTTCCCACAAAATGGCCATATTAGCAATTaGGCAGGTACCCGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: NFQLLLSSYKPLILFPQNGHISN*AGTRGP
Trigger: TGGCCCTCGGGTACCTGCCAAATTGCTAATATGGCC...ATTTTGTGGGAAAAGAATTAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVACSSL*SYSREP
Trigger: CGGCTCTCTTGAATATGACAACAGAGAAGAACACGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLACSSL*SYSREP
Trigger: CGGCTCTCTTGAATATGACAACAGAGAAGAACACGC...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGTTCCTTTAAGGCATaGCGGACTGTGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESSFKA*RTVAWF
Trigger: GAACCATGCCACAGTCCGCAATGCCTTAAAGGAACT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACTCTGGTTCATCTCTTaGAGCAGTTCCTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKLWFIS*SSSFKA
Trigger: TGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGAGAGAGGGCATTCTTaGGCTAATGTGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKERGHS*ANVLWF
Trigger: GAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACTCCTGGCACTTGGTaGCTGACACATTGGCATAAT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTPGTW*LTHWHN
Trigger: ATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAAGTACTGTGGTGAATTaGGCTGTGAGGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSSTVVN*AVRRLF
Trigger: GAACAGTCTCCTCACAGCCAAATTCACCACAGTACT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGTACTGTGGTGAATTaGGCTGTGAGGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSSTVVN*AVRRLF
Trigger: GAACAGTCTCCTCACAGCCAAATTCACCACAGTACT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGCACTTGGTTTCGGATaGGAGTACTGTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHALGFG*EYCGEF
Trigger: AAATTCACCACAGTACTCCAATCCGAAACCAAGTGC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGCACTTGGTTTCGGATaGGAGTACTGTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKALGFG*EYCGEF
Trigger: AAATTCACCACAGTACTCCAATCCGAAACCAAGTGC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSLLPYK*WTKLGR
Trigger: TCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAA...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSMGHGY*LPYKLW
Trigger: CCACAACTTGTAAGGCAACAAATAGCCATGGCCCAT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAACTTCCACGGAAGAGTaGGTTGGCTCTGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVETSTEE*VGSGLT
Trigger: AGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCTCATCTCTGACTaGCTGGTAGATATCTGGAGA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVQLISD*LVDIWR
Trigger: TCTCCAGATATCTACCAGCAAGTCAGAGATGAGCTG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAAATCCCTGTGTGCGGTaGAATGCCACTCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRNPCVR*NATLAK
Trigger: CTTTGCAAGAGTGGCATTCAACCGCACACAGGGATT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATCCACTTCTGGCAGATaGAGGAAATTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVESTSGR*RKFCMA
Trigger: GGCCATGCAGAATTTCCTCAATCTGCCAGAAGTGGA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCATTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPFGKQG*RHLGPF
Trigger: AAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAA...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACTTCTAAGGAGATCTTaGTGCGAGACCGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLLRRS*CETGAF
Trigger: AAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATGACCGATGTATTGCTTaGCCTAGTAGAAGTTCACAT +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDDRCIA*PSRSSH
Trigger: ATGTGAACTTCTACTAGGCAAAGCAATACATCGGTC...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAGTCTATTCTTTCGGATaGCAAAGTCTCTGTCCCATG +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKVYSFG*QSLCPM
Trigger: CATGGGACAGAGACTTTGCAATCCGAAAGAATAGAC...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACGTCTATTCTTTCGGATaGCAAAGTCTCTGTCCCATG +
Preference number: 5 (lower is better)
Translates to: MKAENPWTDVLLCLVEVHVYSFG*QSLCPM
Trigger: CATGGGACAGAGACTTTGCAATCCGAAAGAATAGAC...GTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCCCACCTTGTAAGAGCTaGGCAAAATCAGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVPPCKS*AKSVSI
Trigger: AATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGG...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTGCGGGAAATTGTGCTTaGTCAAGAGGCACTACAAGA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVAGNCA*SRGTTR
Trigger: TCTTGTAGTGCCTCTTGACAAAGCACAATTTCCCGC...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS TCA 90 bp AGTACCATCATAATCACCTGGGATCTTGTTAGAAATGTCCATTTCTaGGTCCAACCTCAGACTTACTCAATCAGAAACTATGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: STIIITWDLVRNVHF*VQPQTYSIRNYGMR
Trigger: CCTCATCCCATAGTTTCTGATTGAGTAAGTCTGAGGTTGGACTCAGAAATGGACATTTCTAACAAGATCCCAGGTGATTATGATGGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CCA 90 bp ATTTTAATCTACTGTTTTCTTGAAGGCTTACCATATTCATTCTCCTaGAAGTATTCCTCACCTCCAGCTCACCATGAACCTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: ILIYCFLEGLPYSFS*KYSSPPAHHEPPPQ
Trigger: TTGTGGTGGAGGTTCATGGTGAGCTGGAGGTGAGGAATACTTCCAGGAGAATGAATATGGTAAGCCTTCAAGAAAACAGTAGATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPACSSL*SYSREP
Trigger: CGGCTCTCTTGAATATGACAACAGAGAAGAACACGC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEACSSL*SYSREP
Trigger: CGGCTCTCTTGAATATGACAACAGAGAAGAACACGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCTCTGGTTCATCTCTTaGAGCAGTTCCTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVLWFIS*SSSFKA
Trigger: TGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATATTTGGTAAATGCATaGGACGCTGGCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRYLVNA*DAGPEH
Trigger: GTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAATTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKLLPYK*WTKLGR
Trigger: TCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAA...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAATTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVELLPYK*WTKLGR
Trigger: TCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAA...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGATTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRLLPYK*WTKLGR
Trigger: TCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAA...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPGHGYL*PYKLWT
Trigger: AGTCCACAACTTGTAAGGCAACAAATAGCCATGGCC...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPMGHGY*LPYKLW
Trigger: CCACAACTTGTAAGGCAACAAATAGCCATGGCCCAT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRMGHGY*LPYKLW
Trigger: CCACAACTTGTAAGGCAACAAATAGCCATGGCCCAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEANGNL*VYQMGH
Trigger: ATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKANGNL*VYQMGH
Trigger: ATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACAGCTCATCTCTGACTaGCTGGTAGATATCTGGAGA +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPQLISD*LVDIWR
Trigger: TCTCCAGATATCTACCAGCAAGTCAGAGATGAGCTG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAATCATGAATAAAGCTTaGGAGGATCCCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRIMNKA*EDPQGF
Trigger: GAAGCCCTGGGGATCCTCCAAAGCTTTATTCATGAT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTAACGCTTTAGTGTCTTaGCCAAGGCGATGTCTGATT +
Preference number: 5 (lower is better)
Translates to: EMKAENPWTDVLLCLVEVNALVS*PRRCLI
Trigger: AATCAGACATCGCCTTGGCAAAGACACTAAAGCGTT...AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAATTTTCATCCTGGTACTaGCCTGATGTAACTTCCGTT +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKFSSWY*PDVTSV
Trigger: AACGGAAGTTACATCAGGCAAGTACCAGGATGAAAA...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGGATGGAGATTTATTaGAGAGGGAGCCCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRMEIY*RGSPFN
Trigger: GTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAATTCAAAAACAGTTCTaGTTAGGGCTGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKIQKQF*LGLSSQ
Trigger: CTGGGATGACAGCCCTAACAAGAACTGTTTTTGAAT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCTATTGCATGAGGTCTTaGACAAGGTTTTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVYCMRS*TRFCES
Trigger: GCTTTCACAAAACCTTGTCAAAGACCTCATGCAATA...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp GCTTCTGGTGTTTCTCATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTATTGCATGAGGTCTTaGACAAGGTTTTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: ASGVSHRKPKEIWSTIVDYCMRS*TRFCES
Trigger: GCTTTCACAAAACCTTGTCAAAGACCTCATGCAATA...ATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATGAGAAACACCAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ACTAGGCCAGTCCTGAATGTGAGGTCTCCTCTTGCAATTACTGTAAGTAGAAGTACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: TRPVLNVRSPLAITVSRSTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...ACTTCTACTTACAGTAATTGCAAGAGGAGACCTCACATTCAGGACTGGCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTGCAGCTAGAATTAGCTaGTATTGCAACATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPAARIS*YCNMSS
Trigger: AGAAGACATGTTGCAATACAAGCTAATTCTAGCTGC...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGTTGAAGTGTAAAAGATACCAAATGCGGATGCCATCGATAGATGAACCACCTCAAACAACCATCCTTTaGCAAAGGTATATGACGCTT +
Preference number: 5 (lower is better)
Translates to: WLKCKRYQMRMPSIDEPPQTTIL*QRYMTL
Trigger: AAGCGTCATATACCTTTGCAAAAGGATGGTTGTTTG...AGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACCACCTTGTAAGAGCTaGGCAAAATCAGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKPPCKS*AKSVSI
Trigger: AATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGCGGGAAATTGTGCTTaGTCAAGAGGCACTACAAGA +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRAGNCA*SRGTTR
Trigger: TCTTGTAGTGCCTCTTGACAAAGCACAATTTCCCGC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGAAAGTTTCTGGTGCTaGGCTTTGCAGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVEESFWC*ALQCSP
Trigger: AGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTC...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTCCAATTAACTATCTGTaGTGTCAGAATCGGCGAGTG +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSPINYL*CQNRRV
Trigger: CACTCGCCGATTCTGACACAACAGATAGTTAATTGG...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCGCAAGTCTTCCAACTTaGAACAACTTTGTAATTGGA +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVASLPT*NNFVIG
Trigger: TCCAATTACAAAGTTGTTCAAAGTTGGAAGACTTGC...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAACCAGCTGGTTCATATTaGGTAAATGCATTGGACGCT +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKPAGSY*VNALDA
Trigger: AGCGTCCAATGCATTTACCAAATATGAACCAGCTGG...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGCACTTGGTTTCGGATaGGAGTACTGTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRALGFG*EYCGEF
Trigger: AAATTCACCACAGTACTCCAATCCGAAACCAAGTGC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGACCGATGTATTGCTTaGCCTAGTAGAAGTTCACAT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSDRCIA*PSRSSH
Trigger: ATGTGAACTTCTACTAGGCAAAGCAATACATCGGTC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGACCGATGTATTGCTTaGCCTAGTAGAAGTTCACAT +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSDRCIA*PSRSSH
Trigger: ATGTGAACTTCTACTAGGCAAAGCAATACATCGGTC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACCTTGGACCGATGTATaGCTTTGCCTAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRPWTDV*LCLVEV
Trigger: AACTTCTACTAGGCAAAGCAATACATCGGTCCAAGG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGGATGGAGATTTATTaGAGAGGGAGCCCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERMEIY*RGSPFN
Trigger: GTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCAAGGATGGAGATTTATTaGAGAGGGAGCCCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPRMEIY*RGSPFN
Trigger: GTTAAAGGGGCTCCCTCTCAAATAAATCTCCATCCT...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TGGAATGTGTACGAAGAAGAGGAAGCCCAAAGTGAAGCAGAAATCAGAAATGTCACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: WNVYEEEEAQSEAEIRNVTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...GACATTTCTGATTTCTGCTTCACTTTGGGCTTCCTCTTCTTCGTACACATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CATAGGAAGCCGAAAGAGATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTGCAGCTAGAATTAGCTaGTATTGCAACATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HRKPKEIWSTIVDCSFNAAARIS*YCNMSS
Trigger: AGAAGACATGTTGCAATACAAGCTAATTCTAGCTGC...AGCATTAAAGCTGCAATCTACTATAGTACTCCAGATCTCTTTCGGCTTCCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAACAAACAACCATCCTTTaGCAAAGGTATATGACGCTT +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKQTTIL*QRYMTL
Trigger: AAGCGTCATATACCTTTGCAAAAGGATGGTTGTTTG...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AACTTCCAGTTGCTGCTTAGTTCATACAAACCTCTAATTCTTTTCCCACAAAATGAAAGTTTCTGGTGCTaGGCTTTGCAGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NFQLLLSSYKPLILFPQNESFWC*ALQCSP
Trigger: AGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTC...ATTTTGTGGGAAAAGAATTAGAGGTTTGTATGAACTAAGCAGCAACTGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 90 bp TTTAAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATTATCTCTGGTCAATTTCGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FKEMKAENPWTDVLL*LVEVHIISGQFRQV
Trigger: CACCTGCCGAAATTGACCAGAGATAATGTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS CCA 90 bp GAACTTTTCCTTTTAGTATCAATAAAGCCTAGTAATTGGGTTTGTTaGTTACCTAAGCTCGAGTTCGACTTTCTCAGTCTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ELFLLVSIKPSNWVC*LPKLEFDFLSLSLS
Trigger: AGAGAGAGAGAGACTGAGAAAGTCGAACTCGAGCTTAGGTAACCAACAAACCCAATTACTAGGCTTTATTGATACTAAAAGGAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000463386.1
ENST00000614512.4
CDS-3UTR CAA 90 bp CCATTACGTGTACAGAGTGACCTTCAGCAACAGTGTAAGAAGACAATTTGGAAAAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PLRVQSDLQQQCKKTIWKRNLEE*VILGVQ
Trigger: CTGAACTCCTAATATCACCAATTCTTCTAAGTTCCT...TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAGACCGATGTATTGCTTaGCCTAGTAGAAGTTCACAT +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRDRCIA*PSRSSH
Trigger: ATGTGAACTTCTACTAGGCAAAGCAATACATCGGTC...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATAGACATATATGCATTGTAATTCGCAAAGATCTGGCAAGACCACAGGCTAAAATTCAAAAACAGTTCTaGTTAGGGCTGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: NRHICIVIRKDLARPQAKIQKQF*LGLSSQ
Trigger: CTGGGATGACAGCCCTAACAAGAACTGTTTTTGAAT...TTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCATATTGCATGAGGTCTTaGACAAGGTTTTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSYCMRS*TRFCES
Trigger: GCTTTCACAAAACCTTGTCAAAGACCTCATGCAATA...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCACAAACAACCATCCTTTaGCAAAGGTATATGACGCTT +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSQTTIL*QRYMTL
Trigger: AAGCGTCATATACCTTTGCAAAAGGATGGTTGTTTG...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp ATCTGGAGTACTATAGTAGATTGCAGCTTTAATGCTCATCCCATTAAACATCCACCACCTTGTAAGAGCTaGGCAAAATCAGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: IWSTIVDCSFNAHPIKHPPPCKS*AKSVSI
Trigger: AATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGG...TGGATGTTTAATGGGATGAGCATTAAAGCTGCAATCTACTATAGTACTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSRNLEE*VILGVQ
Trigger: CTGAACTCCTAATATCACCAATTCTTCTAAGTTCCT...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp AGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTGCAAGTCTTCCAACTTaGAACAACTTTGTAATTGGA +
Preference number: 5 (lower is better)
Translates to: RNESRKSLDRCIALPSRSASLPT*NNFVIG
Trigger: TCCAATTACAAAGTTGTTCAAAGTTGGAAGACTTGC...ACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAGCAAGTCTTCCAACTTaGAACAACTTTGTAATTGGA +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSASLPT*NNFVIG
Trigger: TCCAATTACAAAGTTGTTCAAAGTTGGAAGACTTGC...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
CDS-3UTR CAA 90 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAGTTCAACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: NESRKSLDRCIALPSRSSTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...TGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGACAAACAACCATCCTTTaGCAAAGGTATATGACGCTT +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRQTTIL*QRYMTL
Trigger: AAGCGTCATATACCTTTGCAAAAGGATGGTTGTTTG...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TCTCTCTGGTCTGTCCATGATGATGCAGAATGTCAACTGTTAAATGTGTTTCTTTATCCAAAAATTCAATaGCCCAGAGTGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: SLWSVHDDAECQLLNVFLYPKIQ*PRVDIL
Trigger: AAGGATATCCACTCTGGGCAATTGAATTTTTGGATA...AAGAAACACATTTAACAGTTGACATTCTGCATCATCATGGACAGACCAGAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CAA 90 bp ATCCATAAACCACTTAATGGGAAGCAAACCCACGTAAAAGACTTTCGTATGTATACTTTCGTATGTATTTaGGGTGTAGCTACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: IHKPLNGKQTHVKDFRMYTFVCI*GVATSL
Trigger: GAGAGAAGTAGCTACACCCAAAATACATACGAAAGT...ATACATACGAAAGTCTTTTACGTGGGTTTGCTTCCCATTAAGTGGTTTATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS-3UTR CAA 90 bp AAAGAAATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTGCCTAGTAGAAAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: KEMKAENPWTDVLLCLVERNLEE*VILGVQ
Trigger: CTGAACTCCTAATATCACCAATTCTTCTAAGTTCCT...TTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000457245.5
ENST00000614512.4
CDS-3UTR CAA 90 bp TATTCAGTCTATAGGTGTATCCTGTGCAACAAAGAAATGTCCAAAAGGGTAAGAACTTTCAAAGTGATATaGCATGAGGTCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: YSVYRCILCNKEMSKRVRTFKVI*HEVFDK
Trigger: CTTGTCAAAGACCTCATGCAATATCACTTTGAAAGT...TCTTACCCTTTTGGACATTTCTTTGTTGCACAGGATACACCTATAGACTGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000614512.4
CDS GCA 72 bp CGGCGCGGAGGCGGCGGCGACAAGGCAGTCGCTGGGTaGCGCGTCTGCCGGCGGAGACGCAGACCGACGCGC +
Preference number: 6 (lower is better)
Translates to: RRGGGGDKAVAG*RVCRRRRRPTR
Trigger: GCGCGTCGGTCTGCGTCTCCGCCGGCAGACGCGGCACCCAGCGACTGCCTTGTCGCCGCCGCCTCCGCGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS TCA 72 bp CCTTCGGGAAGGAGACCCGTTCTGGAGAGAAAGGGCTaGGAACCCGGAGGCGGCGGCGGCGGCGGCGAGCCG +
Preference number: 6 (lower is better)
Translates to: PSGRRPVLERKG*EPGGGGGGGEP
Trigger: CGGCTCGCCGCCGCCGCCGCCGCCTCCGGGTTCTCAGCCCTTTCTCTCCAGAACGGGTCTCCTTCCCGAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS CCA 72 bp CTTCGCCCCAAGTGCCCAGGACGGAGCGAGGGGCTGTaGGTCGGCGCAGGGACGCTGGCTGCTCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: LRPKCPGRSEGL*VGAGTLAAHLQ
Trigger: CTGGAGGTGAGCAGCCAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTCCGTCCTGGGCACTTGGGGCGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS GCA 72 bp GAGCGAGGGGCTGTGGGTCGGCGCAGGGACGCTGGCTaGTCACCTCCAGGAGCCGACAGAAGGTGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: ERGAVGRRRDAG*SPPGADRRCLR
Trigger: CCGAAGGCACCTTCTGTCGGCTCCTGGAGGTGAGCAGCCAGCGTCCCTGCGCCGACCCACAGCCCCTCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS CCA 72 bp TCATCAAACCTCCCACGGCCTTGGCCACGGCGCCGTTaGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTCT +
Preference number: 6 (lower is better)
Translates to: SSNLPRPWPRRR*ASRGLPWGCRS
Trigger: AGAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTTGATGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS CCA 72 bp GACGAGGACCTCATGCACGAGGCGGCGAAGGACCGATaGCAGAGAACCGAGTGCGGCGCGAGGCGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: DEDLMHEAAKDR*QRTECGARRWP
Trigger: CGGCCACCGCCTCGCGCCGCACTCGGTTCTCTGCCATCGGTCCTTCGCCGCCTCGTGCATGAGGTCCTCGTC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CAA 72 bp ATCATCAAACCTCCCACGGCCTTGGCCACGGCGCCGTaGGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTC +
Preference number: 6 (lower is better)
Translates to: IIKPPTALATAP*GLPRAPMGLPF
Trigger: GAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTTGATGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS CAA 90 bp CTTCCCAGCTTGATTATTCCTCCCACGGCCTTGGCCACGGCGCCGTaGGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LPSLIIPPTALATAP*GLPRAPMGLPFCSS
Trigger: GCTGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGAATAATCAAGCTGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CAA 72 bp TTGATTATTCCTCCCACGGCCTTGGCCACGGCGCCGTaGGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTC +
Preference number: 6 (lower is better)
Translates to: LIIPPTALATAP*GLPRAPMGLPF
Trigger: GAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGAATAATCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CAA 90 bp AAGACAGGAATCATCAAACCTCCCACGGCCTTGGCCACGGCGCCGTaGGGCCTCCCGCGGGCTCCCATGGGGCTGCCGTTCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: KTGIIKPPTALATAP*GLPRAPMGLPFCSS
Trigger: GCTGGAGCAGAACGGCAGCCCCATGGGAGCCCGCGGGAGGCCCAACGGCGCCGTGGCCAAGGCCGTGGGAGGTTTGATGATTCCTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS GCA 72 bp CCCGCAGACACGGGCTCTCGCTCCGCCGCTCCATGCTaGTCCGACTCGGAGACAAAGTTCCCACCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: PADTGSRSAAPC*SDSETKFPPAG
Trigger: ACCTGCCGGTGGGAACTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCGAGAGCCCGTGTCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS GCA 72 bp AGAGTCGGCGGTCGGAGCGGGGTGACGAGGACCTCATaGACGAGGCGGCGAAGGACCGATGGCAGAGAACCG +
Preference number: 6 (lower is better)
Translates to: RVGGRSGVTRTS*TRRRRTDGREP
Trigger: CGGTTCTCTGCCATCGGTCCTTCGCCGCCTCGTGCATGAGGTCCTCGTCACCCCGCTCCGACCGCCGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443023.5
CDS CCA 72 bp CTCTCCTGGGTCCGGGTATCCCAGGGCATCCGGAGCTaGGGAGGGTTGTGCGGACTACCCAAGGCACGCGCA +
Preference number: 6 (lower is better)
Translates to: LSWVRVSQGIRS*GGLCGLPKARA
Trigger: TGCGCGTGCCTTGGGTAGTCCGCACAACCCTCCCCAGCTCCGGATGCCCTGGGATACCCGGACCCAGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS CAA 72 bp GTCCGGGTATCCCAGGGCATCCGGAGCTGGGGAGGGTaGTGCGGACTACCCAAGGCACGCGCAGATACCGGG +
Preference number: 6 (lower is better)
Translates to: VRVSQGIRSWGG*CGLPKARADTG
Trigger: CCCGGTATCTGCGCGTGCCTTGGGTAGTCCGCACAACCCTCCCCAGCTCCGGATGCCCTGGGATACCCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS CAA 90 bp CTCTCCTGGGTCCGGGTATCCCAGGGCATCCGGAGCTGGGGAGGGTaGTGCGGACTACCCAAGGCACGCGCAGATACCGGGCAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: LSWVRVSQGIRSWGG*CGLPKARADTGQGR
Trigger: TCTTCCCTGCCCGGTATCTGCGCGTGCCTTGGGTAGTCCGCACAACCCTCCCCAGCTCCGGATGCCCTGGGATACCCGGACCCAGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS TCA 72 bp GTCAGAATCGGCGAGTGCAAAGTAGCTGCGCCCCGCTaGCGCGCTCTCTCCTGGGTCCGGGTATCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VRIGECKVAAPR*RALSWVRVSQG
Trigger: GCCCTGGGATACCCGGACCCAGGAGAGAGCGCGTCAGCGGGGCGCAGCTACTTTGCACTCGCCGATTCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS GCA 72 bp GACGCTGGCTGCTCACCTCCAGGAGCCGACAGAAGGTaGCTTCGGCGTCACGCGTCCAACCCTGGGGCTGAT +
Preference number: 6 (lower is better)
Translates to: DAGCSPPGADRR*LRRHASNPGAD
Trigger: ATCAGCCCCAGGGTTGGACGCGTGACGCCGAAGGCACCTTCTGTCGGCTCCTGGAGGTGAGCAGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS GCA 72 bp TGTCCCGCAGACACGGGCTCTCGCTCCGCCGCTCCATaGTGCTCCGACTCGGAGACAAAGTTCCCACCGGCA +
Preference number: 6 (lower is better)
Translates to: CPADTGSRSAAP*CSDSETKFPPA
Trigger: TGCCGGTGGGAACTTTGTCTCCGAGTCGGAGCAGCATGGAGCGGCGGAGCGAGAGCCCGTGTCTGCGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CAA 72 bp GAGGTGGGAGGATCCCTTAAATCCAGGAGGCAGGGTTaGCTGCTCTCCAGCCTTGGGCCTGGGCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: EVGGSLKSRRQG*LLSSLGPGPQS
Trigger: GCTCTGCGGCCCAGGCCCAAGGCTGGAGAGCAGCAAACCCTGCCTCCTGGATTTAAGGGATCCTCCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS GCA 72 bp AGGTGGGAGGATCCCTTAAATCCAGGAGGCAGGGTTTaGTGCTCTCCAGCCTTGGGCCTGGGCCGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: RWEDPLNPGGRV*CSPALGLGRRA
Trigger: AGCTCTGCGGCCCAGGCCCAAGGCTGGAGAGCAGCAAACCCTGCCTCCTGGATTTAAGGGATCCTCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440919.1
CDS CCA 72 bp AGAGCCTTTTCACACCTTCGGGAAGGAGACCCGTTCTaGAGAGAAAGGGCTGAGAACCCGGAGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RAFSHLREGDPF*RERAENPEAAA
Trigger: CGCCGCCGCCTCCGGGTTCTCAGCCCTTTCTCTCCAGAACGGGTCTCCTTCCCGAAGGTGTGAAAAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417098.6
ENST00000443023.5
CDS GCA 72 bp GCACCGGCTCAGGGGGAAGCTGGACCACGTGTTGCATaGGTTCGCTGTGGTGATGCCTTGACTCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: APAQGEAGPRVA*VRCGDALTPPH
Trigger: ATGAGGAGGAGTCAAGGCATCACCACAGCGAACGCATGCAACACGTGGTCCAGCTTCCCCCTGAGCCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS GCA 72 bp TATCTGTTGTGTCAGAATCGGCGAGTGCAAAGTAGCTaGGCCCCGCTGACGCGCTCTCTCCTGGGTCCGGGT +
Preference number: 6 (lower is better)
Translates to: YLLCQNRRVQSS*APLTRSLLGPG
Trigger: ACCCGGACCCAGGAGAGAGCGCGTCAGCGGGGCGCAGCTACTTTGCACTCGCCGATTCTGACACAACAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS CAA 90 bp GACGGATGGTACAGAGGTTTTCCCAGAGGGTGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGAGCAGTTCACACAGCCAGCCCTGAC +
Preference number: 6 (lower is better)
Translates to: DGWYRGFPRGCGFLG*GSPSSGAVHTASPD
Trigger: GTCAGGGCTGGCTGTGTGAACTGCTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACCTCTGTACCATCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS CCA 72 bp TGGGACTGCTGGAGGCCGAGGAGACCATGCTCACATTaGGATTCATGCTCCGCTCCCTCTCATCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: WDCWRPRRPCSH*DSCSAPSHPGR
Trigger: TCTACCAGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCTCCAGCAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS GCA 72 bp TGGAGGCCGAGGAGACCATGCTCACATTGGGATTCATaGTCCGCTCCCTCTCATCCTGGTAGATGCGATCTC +
Preference number: 6 (lower is better)
Translates to: WRPRRPCSHWDS*SAPSHPGRCDL
Trigger: GAGATCGCATCTACCAGGATGAGAGGGAGCGGAGCATGAATCCCAATGTGAGCATGGTCTCCTCGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS CCA 72 bp GAATACCCCAGGGCCAGGAGCGCAGTCTCCACCAGCTaGCTAAAAAGCACATCTTTCCGCACCAGGACAAAC +
Preference number: 6 (lower is better)
Translates to: EYPRARSAVSTS*LKSTSFRTRTN
Trigger: GTTTGTCCTGGTGCGGAAAGATGTGCTTTTTAGCCAGCTGGTGGAGACTGCGCTCCTGGCCCTGGGGTATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS CCA 72 bp ACAGAGGTTTTCCCAGAGGGTGCGGTTTTCTGGGCTTaGGTTCTCCTTCCAGCGGAGCAGTTCACACAGCCA +
Preference number: 6 (lower is better)
Translates to: TEVFPEGAVFWA*VLLPAEQFTQP
Trigger: TGGCTGTGTGAACTGCTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS CCA 72 bp TACCGGGCAGGGAAGAAGGGCTCCGTGTTCCAAGGATaGTCGTTTACCTCTCCTGAGATCAGCCCTAATCCC +
Preference number: 6 (lower is better)
Translates to: YRAGKKGSVFQG*SFTSPEISPNP
Trigger: GGGATTAGGGCTGATCTCAGGAGAGGTAAACGACCATCCTTGGAACACGGAGCCCTTCTTCCCTGCCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS CAA 72 bp TACAGAGGTTTTCCCAGAGGGTGCGGTTTTCTGGGCTaGGGTTCTCCTTCCAGCGGAGCAGTTCACACAGCC +
Preference number: 6 (lower is better)
Translates to: YRGFPRGCGFLG*GSPSSGAVHTA
Trigger: GGCTGTGTGAACTGCTCCGCTGGAAGGAGAACCCAAGCCCAGAAAACCGCACCCTCTGGGAAAACCTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS TCA 72 bp CGCAATAAAACGCACAGGGACTGCTCACGGTCTGTCTaGAACTTGGCTGACTGGGGCTCTGTCCATGGAGCA +
Preference number: 6 (lower is better)
Translates to: RNKTHRDCSRSV*NLADWGSVHGA
Trigger: TGCTCCATGGACAGAGCCCCAGTCAGCCAAGTTTCAGACAGACCGTGAGCAGTCCCTGTGCGTTTTATTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417098.6
ENST00000440919.1
ENST00000443023.5
CDS TCA 72 bp GTTCGCTGTGGTGATGCCTTGACTCCTCCTCATAGATaGCATCCCTCTCATGCTGGGGAAGGTTCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: VRCGDALTPPHR*HPSHAGEGSGS
Trigger: GCTTCCTGAACCTTCCCCAGCATGAGAGGGATGTCATCTATGAGGAGGAGTCAAGGCATCACCACAGCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS TCA 72 bp GACCACGTGTTGCATGCGTTCGCTGTGGTGATGCCTTaGCTCCTCCTCATAGATGACATCCCTCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: DHVLHAFAVVMP*LLLIDDIPLML
Trigger: CAGCATGAGAGGGATGTCATCTATGAGGAGGAGTCAAGGCATCACCACAGCGAACGCATGCAACACGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 72 bp ATCTGGAGAGACTTCCACGGAAGAGTTGGTTGGCTCTaGCTTAACTGCTCTGGGGATGGGTGGATGGTTCAG +
Preference number: 6 (lower is better)
Translates to: IWRDFHGRVGWL*LNCSGDGWMVQ
Trigger: CTGAACCATCCACCCATCCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCTTCCGTGGAAGTCTCTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 72 bp CTGTGTGCGGTTGAATGCCACTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTTCAGCTCATCTCTGAC +
Preference number: 6 (lower is better)
Translates to: LCAVECHSCKDS*GHTGPLQLISD
Trigger: GTCAGAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 72 bp GGAGACTGTTCGTTGGTTTTCCCCAGGGATGCCAGCTaGTTCATATTTGGTAAATGCATTGGACGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GDCSLVFPRDAS*FIFGKCIGRWP
Trigger: GGGCCAGCGTCCAATGCATTTACCAAATATGAACCAGCTGGCATCCCTGGGGAAAACCAACGAACAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 72 bp TGTGTGCGGTTGAATGCCACTCTTGCAAAGACAGCTTaGGACACACTGGCCCTCTTCAGCTCATCTCTGACT +
Preference number: 6 (lower is better)
Translates to: CVRLNATLAKTA*DTLALFSSSLT
Trigger: AGTCAGAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 72 bp TTCCGCACCAGGACAAACTCGGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCGTCCAACTGCTCCACG +
Preference number: 6 (lower is better)
Translates to: FRTRTNSACSSL*SYSREPSNCST
Trigger: CGTGGAGCAGTTGGACGGCTCTCTTGAATATGACAACAGAGAAGAACACGCCGAGTTTGTCCTGGTGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS CAA 72 bp ATGCTGGTGAGCCAGGAGCCGGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCATGGCTATTTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: MLVSQEPANGNL*VYQMGHGYLLP
Trigger: AGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAGATTGCCGTTAGCCGGCTCCTGGCTCACCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp GGCTTGAGGATGCTGGTGAGCCAGGAGCCGGCTAACGGCAATCTGTaGGTTTATCAGATGGGCCATGGCTATTTGTTGCCTTACAAGTTG +
Preference number: 6 (lower is better)
Translates to: GLRMLVSQEPANGNL*VYQMGHGYLLPYKL
Trigger: CAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAGATTGCCGTTAGCCGGCTCCTGGCTCACCAGCATCCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp CAACAATCCCTGTGTGCGGTTGAATGCCACTCTTGCAAAGACAGCTaGGGACACACTGGCCCTCTTCAGCTCATCTCTGACTTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: QQSLCAVECHSCKDS*GHTGPLQLISDLLV
Trigger: TACCAGCAAGTCAGAGATGAGCTGAAGAGGGCCAGTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAGGGATTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CAA 90 bp AACTGCGAATCCTCCTCCGGATCAATGTCCAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAGTACTTCTCGGCTCGCTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: NCESSSGSMSRNLEE*VILGVQYFSARCAR
Trigger: GCGGGCGCAGCGAGCCGAGAAGTACTGAACTCCTAATATCACCAATTCTTCTAAGTTCCTGGACATTGATCCGGAGGAGGATTCGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS TCA 72 bp TCCAACCTCAGACTTACTCAATCAGAAACTATGGGATaGGGCCCAGCAGTCTGTGTTTCACAGCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SNLRLTQSETMG*GPAVCVSQPSR
Trigger: CCTGGAGGGCTGTGAAACACAGACTGCTGGGCCTCATCCCATAGTTTCTGATTGAGTAAGTCTGAGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS GCA 72 bp CAGAATCTCAGACAACAATCCCTGTGTGCGGTTGAATaGCACTCTTGCAAAGACAGCTTGGGACACACTGGC +
Preference number: 6 (lower is better)
Translates to: QNLRQQSLCAVE*HSCKDSLGHTG
Trigger: GCCAGTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAGGGATTGTTGTCTGAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 72 bp TTGAGCAGTTCCTTTAAGGCATTGCGGACTGTGGCATaGTTCCACTGCTCCGCAGGCAAGTCTTCCAACTTT +
Preference number: 6 (lower is better)
Translates to: LSSSFKALRTVA*FHCSAGKSSNF
Trigger: AAAGTTGGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCTTAAAGGAACTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS CCA 72 bp CAGCTGAGCCGAAAGAGTGTGGATGGCTTCCTGGTCTaGGTACAGGCCTACATCATGAATAAAGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: QLSRKSVDGFLV*VQAYIMNKALE
Trigger: CTCCAAAGCTTTATTCATGATGTAGGCCTGTACCCAGACCAGGAAGCCATCCACACTCTTTCGGCTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CAA 72 bp GGGCACTTGGTTTCGGATTGGAGTACTGTGGTGAATTaGGCTGTGAGGAGACTGTTCGTTGGTTTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GHLVSDWSTVVN*AVRRLFVGFPQ
Trigger: CTGGGGAAAACCAACGAACAGTCTCCTCACAGCCAAATTCACCACAGTACTCCAATCCGAAACCAAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp AGCACATCTTTCCGCACCAGGACAAACTCGGCGTGTTCTTCTCTGTaGTCATATTCAAGAGAGCCGTCCAACTGCTCCACGACACAAAAG +
Preference number: 6 (lower is better)
Translates to: STSFRTRTNSACSSL*SYSREPSNCSTTQK
Trigger: CTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCTTGAATATGACAACAGAGAAGAACACGCCGAGTTTGTCCTGGTGCGGAAAGATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS CAA 90 bp TGGGAGAGAGGGCATTCTTTGGCTAATGTGCTCTGGTTCATCTCTTaGAGCAGTTCCTTTAAGGCATTGCGGACTGTGGCATGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: WERGHSLANVLWFIS*SSSFKALRTVAWFH
Trigger: GTGGAACCATGCCACAGTCCGCAATGCCTTAAAGGAACTGCTCAAAGAGATGAACCAGAGCACATTAGCCAAAGAATGCCCTCTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS CAA 90 bp CAGCCAGCCCTGACTTTTATTTGCAGCCACTTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTTCATCTCCTGTTGGATCTCGTCATA +
Preference number: 6 (lower is better)
Translates to: QPALTFICSHFGKQG*RHLGPFHLLLDLVI
Trigger: TATGACGAGATCCAACAGGAGATGAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS GCA 72 bp TCCTTTAAGGCATTGCGGACTGTGGCATGGTTCCACTaGTCCGCAGGCAAGTCTTCCAACTTTGAACAACTT +
Preference number: 6 (lower is better)
Translates to: SFKALRTVAWFH*SAGKSSNFEQL
Trigger: AAGTTGTTCAAAGTTGGAAGACTTGCCTGCGGAGCAGTGGAACCATGCCACAGTCCGCAATGCCTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000484124.1
CDS CCA 72 bp CAGATGGGCCATGGCTATTTGTTGCCTTACAAGTTGTaGACTAAGCTGGGGAGAAAGAAGACCAGGGCTCAT +
Preference number: 6 (lower is better)
Translates to: QMGHGYLLPYKL*TKLGRKKTRAH
Trigger: ATGAGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 72 bp GGCTCTGTCCATGGAGCAAAAGTAGAGAATCCAGGGTaGAAAGTTTCTGGTGCTTGGCTTTGCAGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: GSVHGAKVENPG*KVSGAWLCSVL
Trigger: GAGAACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCTGGATTCTCTACTTTTGCTCCATGGACAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417098.6
ENST00000440919.1
ENST00000443023.5
CDS CCA 72 bp CTGAGTCCAACCTCAGACTTACTCAATCAGAAACTATaGGATGAGGCCCAGCAGTCTGTGTTTCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: LSPTSDLLNQKL*DEAQQSVFHSP
Trigger: AGGGCTGTGAAACACAGACTGCTGGGCCTCATCCCATAGTTTCTGATTGAGTAAGTCTGAGGTTGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CAA 72 bp CGTTGGTTTTCCCCAGGGATGCCAGCTGGTTCATATTaGGTAAATGCATTGGACGCTGGCCCAGAACACAAT +
Preference number: 6 (lower is better)
Translates to: RWFSPGMPAGSY*VNALDAGPEHN
Trigger: ATTGTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATATGAACCAGCTGGCATCCCTGGGGAAAACCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp CTGTTGGTTTATCAGATGGGCCATGGCTATTTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGAAAGAAGACCAGGGCTCATGATGGG +
Preference number: 6 (lower is better)
Translates to: LLVYQMGHGYLLPYK*WTKLGRKKTRAHDG
Trigger: CCCATCATGAGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp CCGGCTAACGGCAATCTGTTGGTTTATCAGATGGGCCATGGCTATTaGTTGCCTTACAAGTTGTGGACTAAGCTGGGGAGAAAGAAGACC +
Preference number: 6 (lower is better)
Translates to: PANGNLLVYQMGHGY*LPYKLWTKLGRKKT
Trigger: GGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAGATTGCCGTTAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS GCA 72 bp GAGAATCCAGGGTGGAAAGTTTCTGGTGCTTGGCTTTaGAGTGTTCTCCTAGTCTTCCTCTTTACTCCTTCC +
Preference number: 6 (lower is better)
Translates to: ENPGWKVSGAWL*SVLLVFLFTPS
Trigger: GGAAGGAGTAAAGAGGAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCTGGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417098.6
ENST00000440919.1
ENST00000443023.5
CDS CCA 72 bp ATGGCTATTTGTTGCCTTACAAGTTGTGGACTAAGCTaGGGAGAAAGAAGACCAGGGCTCATGATGGGCTGT +
Preference number: 6 (lower is better)
Translates to: MAICCLTSCGLS*GERRPGLMMGC
Trigger: ACAGCCCATCATGAGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CCA 72 bp AGGAGCCGGCTAACGGCAATCTGTTGGTTTATCAGATaGGCCATGGCTATTTGTTGCCTTACAAGTTGTGGA +
Preference number: 6 (lower is better)
Translates to: RSRLTAICWFIR*AMAICCLTSCG
Trigger: TCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAGATTGCCGTTAGCCGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 72 bp CCAGGGATGCCAGCTGGTTCATATTTGGTAAATGCATaGGACGCTGGCCCAGAACACAATAGTCTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: PGMPAGSYLVNA*DAGPEHNSLKG
Trigger: ACCTTTCAGACTATTGTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATATGAACCAGCTGGCATCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 72 bp TATCAGATGGGCCATGGCTATTTGTTGCCTTACAAGTaGTGGACTAAGCTGGGGAGAAAGAAGACCAGGGCT +
Preference number: 6 (lower is better)
Translates to: YQMGHGYLLPYK*WTKLGRKKTRA
Trigger: AGCCCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp GAGACTGTTCGTTGGTTTTCCCCAGGGATGCCAGCTGGTTCATATTaGGTAAATGCATTGGACGCTGGCCCAGAACACAATAGTCTGAAA +
Preference number: 6 (lower is better)
Translates to: ETVRWFSPGMPAGSY*VNALDAGPEHNSLK
Trigger: TTTCAGACTATTGTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATATGAACCAGCTGGCATCCCTGGGGAAAACCAACGAACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp GCTAACGGCAATCTGTTGGTTTATCAGATGGGCCATGGCTATTTGTaGCCTTACAAGTTGTGGACTAAGCTGGGGAGAAAGAAGACCAGG +
Preference number: 6 (lower is better)
Translates to: ANGNLLVYQMGHGYL*PYKLWTKLGRKKTR
Trigger: CCTGGTCTTCTTTCTCCCCAGCTTAGTCCACAACTTGTAAGGCAACAAATAGCCATGGCCCATCTGATAAACCAACAGATTGCCGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000614512.4
CDS CAA 90 bp AGCAAAAGTAGAGAATCCAGGGTGGAAAGTTTCTGGTGCTTGGCTTaGCAGTGTTCTCCTAGTCTTCCTCTTTACTCCTTCCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: SKSRESRVESFWCLA*QCSPSLPLYSFPFP
Trigger: AGGGAAGGGGAAGGAGTAAAGAGGAAGACTAGGAGAACACTGCAAAGCCAAGCACCAGAAACTTTCCACCCTGGATTCTCTACTTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417098.6
ENST00000440919.1
ENST00000443023.5
CDS CAA 72 bp TCCTCCTCCGGATCAATGTCCAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAGTACTTCTCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SSSGSMSRNLEE*VILGVQYFSAR
Trigger: GCGAGCCGAGAAGTACTGAACTCCTAATATCACCAATTCTTCTAAGTTCCTGGACATTGATCCGGAGGAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260926.9
ENST00000614512.4
CDS CAA 72 bp CTGACTTTTATTTGCAGCCACTTTGGCAAACAGGGCTaGAGACACCTTGGCCCTTTTCATCTCCTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: LTFICSHFGKQG*RHLGPFHLLLD
Trigger: ATCCAACAGGAGATGAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000473517.1
ENST00000614512.4
CDS TCA 72 bp TTACAGTGTTTAATGCTAATTGTACCTGTGTGCGGTTaGATGCCACTCTTGCAAAGACAGCTTGGGACACAC +
Preference number: 6 (lower is better)
Translates to: LQCLMLIVPVCG*MPLLQRQLGTH
Trigger: GTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAGGTACAATTAGCATTAAACACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS GCA 72 bp TCTTCTCTGTTGTCATATTCAAGAGAGCCGTCCAACTaGTCCACGACACAAAAGACAGGAATCATCAAACCT +
Preference number: 6 (lower is better)
Translates to: SSLLSYSREPSN*STTQKTGIIKP
Trigger: AGGTTTGATGATTCCTGTCTTTTGTGTCGTGGAGCAGTTGGACGGCTCTCTTGAATATGACAACAGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000440919.1
ENST00000457245.5
ENST00000614512.4
CDS GCA 72 bp CCTCTTTGCACCCACATAGAGCTTAGCTTCCTGCCTTaGATTTACGAGGGTGCTGAAATTTTAATCTACTGT +
Preference number: 6 (lower is better)
Translates to: PLCTHIELSFLP*IYEGAEILIYC
Trigger: ACAGTAGATTAAAATTTCAGCACCCTCGTAAATGCAAGGCAGGAAGCTAAGCTCTATGTGGGTGCAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CCA 72 bp TGTATTGCTTTGCCTAGTAGAAGTTCACATTATCTCTaGTCAATTTCGGCAGGTGCTGCCTTGCTTTTGTCA +
Preference number: 6 (lower is better)
Translates to: CIALPSRSSHYL*SISAGAALLLS
Trigger: TGACAAAAGCAAGGCAGCACCTGCCGAAATTGACCAGAGATAATGTGAACTTCTACTAGGCAAAGCAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CCA 72 bp GATGAGAGAGTACATACCCAAGTCATTAGTAACATTTaGGGTCCTGAGTTGCATGTTGGGTTCAAAGATGTC +
Preference number: 6 (lower is better)
Translates to: DERVHTQVISNI*GPELHVGFKDV
Trigger: GACATCTTTGAACCCAACATGCAACTCAGGACCCCAAATGTTACTAATGACTTGGGTATGTACTCTCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CCA 72 bp TACTGTTTTCTTGAAGGCTTACCATATTCATTCTCCTaGAAGTATTCCTCACCTCCAGCTCACCATGAACCT +
Preference number: 6 (lower is better)
Translates to: YCFLEGLPYSFS*KYSSPPAHHEP
Trigger: AGGTTCATGGTGAGCTGGAGGTGAGGAATACTTCCAGGAGAATGAATATGGTAAGCCTTCAAGAAAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CAA 72 bp ATTACAGTGTTTAATGCTAATTGTACCTGTGTGCGGTaGAATGCCACTCTTGCAAAGACAGCTTGGGACACA +
Preference number: 6 (lower is better)
Translates to: ITVFNANCTCVR*NATLAKTAWDT
Trigger: TGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAGGTACAATTAGCATTAAACACTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483346.2
CDS CAA 72 bp TCCTCCTCCGGATCAATGTCCAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAGTACTTCTTAGTCCTT +
Preference number: 6 (lower is better)
Translates to: SSSGSMSRNLEE*VILGVQYFLVL
Trigger: AAGGACTAAGAAGTACTGAACTCCTAATATCACCAATTCTTCTAAGTTCCTGGACATTGATCCGGAGGAGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS CAA 90 bp AACTGCGAATCCTCCTCCGGATCAATGTCCAGGAACTTAGAAGAATaGGTGATATTAGGAGTTCAGTACTTCTTAGTCCTTGATTTCGAA +
Preference number: 6 (lower is better)
Translates to: NCESSSGSMSRNLEE*VILGVQYFLVLDFE
Trigger: TTCGAAATCAAGGACTAAGAAGTACTGAACTCCTAATATCACCAATTCTTCTAAGTTCCTGGACATTGATCCGGAGGAGGATTCGCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457245.5
CDS TCA 72 bp TTTATACCATCTCCCAAACTCCTGGCACTTGGTTGCTaGCACATTGGCATAATATGTGCTATTTACAATGGA +
Preference number: 6 (lower is better)
Translates to: FIPSPKLLALGC*HIGIICAIYNG
Trigger: TCCATTGTAAATAGCACATATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATGGTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000484124.1
CDS CCA 72 bp ATCTCCCAAACTCCTGGCACTTGGTTGCTGACACATTaGCATAATATGTGCTATTTACAATGGATGAAATCA +
Preference number: 6 (lower is better)
Translates to: ISQTPGTWLLTH*HNMCYLQWMKS
Trigger: TGATTTCATCCATTGTAAATAGCACATATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000484124.1
CDS CCA 72 bp CTTTTAGTATCAATAAAGCCTAGTAATTGGGTTTGTTaGTTACCTAAGCTCGAGTTCGACTTTCTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: LLVSIKPSNWVC*LPKLEFDFLSL
Trigger: GAGACTGAGAAAGTCGAACTCGAGCTTAGGTAACCAACAAACCCAATTACTAGGCTTTATTGATACTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260926.9
ENST00000463386.1
ENST00000614512.4
CDS CCA 72 bp TGTACTTTTTATACCATCTCCCAAACTCCTGGCACTTaGTTGCTGACACATTGGCATAATATGTGCTATTTA +
Preference number: 6 (lower is better)
Translates to: CTFYTISQTPGT*LLTHWHNMCYL
Trigger: TAAATAGCACATATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATGGTATAAAAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000484124.1
CDS CAA 72 bp ACTTTTTATACCATCTCCCAAACTCCTGGCACTTGGTaGCTGACACATTGGCATAATATGTGCTATTTACAA +
Preference number: 6 (lower is better)
Translates to: TFYTISQTPGTW*LTHWHNMCYLQ
Trigger: TTGTAAATAGCACATATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATGGTATAAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000484124.1
CDS CAA 90 bp TCTTCTTGTACTTTTTATACCATCTCCCAAACTCCTGGCACTTGGTaGCTGACACATTGGCATAATATGTGCTATTTACAATGGATGAAA +
Preference number: 6 (lower is better)
Translates to: SSCTFYTISQTPGTW*LTHWHNMCYLQWMK
Trigger: TTTCATCCATTGTAAATAGCACATATTATGCCAATGTGTCAGCAACCAAGTGCCAGGAGTTTGGGAGATGGTATAAAAAGTACAAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000443023.5
ENST00000457245.5
ENST00000483346.2
ENST00000484124.1
CDS GCA 72 bp ATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTTaGCTAGTAGAAGTTCACATTATCTCTGGTCAATTT +
Preference number: 6 (lower is better)
Translates to: MKAENPWTDVLL*LVEVHIISGQF
Trigger: AAATTGACCAGAGATAATGTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CAA 72 bp AATGAAAGCAGAAAATCCTTGGACCGATGTATTGCTTaGCCTAGTAGAAGTTCACATTATCTCTGGTCAATT +
Preference number: 6 (lower is better)
Translates to: NESRKSLDRCIA*PSRSSHYLWSI
Trigger: AATTGACCAGAGATAATGTGAACTTCTACTAGGCAAAGCAATACATCGGTCCAAGGATTTTCTGCTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260926.9
ENST00000417098.6
ENST00000428695.5
ENST00000443023.5
ENST00000457245.5
ENST00000614512.4
CDS CAA 72 bp AAGTCATTAGTAACATTTGGGGTCCTGAGTTGCATGTaGGGTTCAAAGATGTCCATTACCTCATCAAAATTA +
Preference number: 6 (lower is better)
Translates to: KSLVTFGVLSCM*GSKMSITSSKL
Trigger: TAATTTTGATGAGGTAATGGACATCTTTGAACCCAACATGCAACTCAGGACCCCAAATGTTACTAATGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483346.2