Pregenerated sensors for SASS6 (Homo sapiens)
Ensembl gene IDs: ENSG00000156876Ensembl transcript IDs: ENST00000287482.6, ENST00000462159.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACCCAGGGAAATAGGCTaGAGACGCAGAGGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLPREIG*RRRGER Trigger: GCGCTCCCCTCTGCGTCTTCAGCCTATTTCCCTGGG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACCCTCGGGATTAGCCTaGGAGGTCCGGGTCCTGATA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLPSGLA*EVRVLI Trigger: TATCAGGACCCGGACCTCTCAGGCTAATCCCGAGGG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTGCCTCGGCTGGTGTaGAGAAAAGCCCAACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLPRLV*RKAQQA Trigger: GGCCTGTTGGGCTTTTCTGCACACCAGCCGAGGCAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGCACTTGGCTCATGTTaGCTCGCTGCCTCGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLALGSC*LAASAG Trigger: ACCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTCATGTTGGCTCGCTaGCTCGGCTGGTGTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLMLAR*LGWCAE Trigger: TTCTGCACACCAGCCGAGGCAGCGAGCCAACATGAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATGGTGGAACAGCACTTaGCTCATGTTGGCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLWWNST*LMLARC Trigger: GCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGTTGCTGCTGGAATGTaGAGGCGGAGTAGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLVAAGM*RRSSRR Trigger: CCTTCTACTACTCCGCCTGCACATTCCAGCAGCAAC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATGCAACGGGACTAGTTaGTGGAACAGCACTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLCNGTS*WNSTWL Trigger: GAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGGTCCTGATAAAGTTTaGGTTTGGCGCTCGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLGPDKV*VWRSAS Trigger: AGAAGCCGAGCGCCAAACTCAAACTTTATCAGGACC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTGAACCTTTGTTCCTaGACCAGGGTGGCTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLNLCS*TRVAGI Trigger: AATACCAGCCACCCTGGTTCAGGAACAAAGGTTCAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAACGGGACTAGTTGGTaGAACAGCACTTGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLNGTSW*NSTWLM Trigger: CATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACAGAGGGGAGCGCTGTaGGTTTGGAAGATGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLQRGAL*VWKMYV Trigger: TACATACATCTTCCAAACCCACAGCGCTCCCCTCTG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATCTAAATGGGGGAGGTaGGGGAGTATCAACTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLSKWGR*GSINCL Trigger: TAGGCAGTTGATACTCCCCCACCTCCCCCATTTAGA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATCTTTGCATTTCACCTaGAACGGGACTAGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLSLHFT*NGTSWW Trigger: CCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATCTCCTCACAGTCTTTaGATTTCACCTGCAACGGGA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLSPHSL*ISPATG Trigger: TCCCGTTGCAGGTGAAATGCAAAGACTGTGAGGAGA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAAAGAGAGGACTTCTTaGTTAGTCCGCTGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLKERTS*LVRCSS Trigger: GGAGCTACAGCGGACTAAGCAAGAAGTCCTCTCTTT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAACCAATCCCACAGGTTaGGTAAGTCAGTCTACCATC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLTNPTG*VSQSTI Trigger: GATGGTAGACTGACTTACCCAACCTGTGGGATTGGT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTGAACCAGGGTGGCTaGTATTTTTGGCAGATATCG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLNQGG*YFWQIS Trigger: CGATATCTGCCAAAAATACCAGCCACCCTGGTTCAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGTTCCTGAACCAGGGTaGCTGGTATTTTTGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLVPEPG*LVFLAD Trigger: ATCTGCCAAAAATACCAGCCACCCTGGTTCAGGAAC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGGAGCGCTGTGGGTTTaGAAGATGTATGTAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLGALWV*KMYVML Trigger: GAGCATTACATACATCTTCCAAACCCACAGCGCTCC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAGTAGTGTATCTAAATaGGGGAGGTGGGGGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLSSVSK*GRWGSI Trigger: GATACTCCCCCACCTCCCCCATTTAGATACACTACT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAATAGTTGCTCCTGACTaGACATCTCCTAGTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLIVAPD*TSPSDA Trigger: TGCATCACTAGGAGATGTTCAGTCAGGAGCAACTAT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGAAGGTATTCTGGAATaGAAATGCAGAGGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLEGILE*KCRGDR Trigger: CCTGTCTCCTCTGCATTTGCATTCCAGAATACCTTC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGTAATGCTCCTAAAGTaGCATCTCTCTGATGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLVMLLK*HLSDGL Trigger: CAGACCATCAGAGAGATGGCACTTTAGGAGCATTAC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGGTGGCTGGTATTTTTaGCAGATATCGAATGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLGGWYF*QISNEG Trigger: TCCCTCATTCGATATCTGCCAAAAATACCAGCCACC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGAGAAATTCCACTTCTaGTTGTGTTGCTGCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLEKFHF*LCCCWN Trigger: ATTCCAGCAGCAACACAATCAGAAGTGGAATTTCTC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTGGCAGATATCGAATaGGGGAAGGTATTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLADIE*GKVFWN Trigger: ATTCCAGAATACCTTCCCTCATTCGATATCTGCCAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAATTCTGGAATGCAAATaGAGAGGAGACAGGATAACC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLILECK*RGDRIT Trigger: GGTTATCCTGTCTCCTCTGCATTTGCATTCCAGAAT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGTCCGCGTAAAGGAATaGTATCTTCCCTTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLVRVKE*YLPFSS Trigger: TGAAGAAAAGGGAAGATAGCATTCCTTTACGCGGAC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGCTACCTGTATGTCATaGATCCCATCCAAAACATGT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLATCMS*IPSKTC Trigger: ACATGTTTTGGATGGGATGCATGACATACAGGTAGC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTACTAAATAGGTTCTaGCTGAGTCCGCGTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLLNRF*LSPRKG Trigger: TCCTTTACGCGGACTCAGCCAGAACCTATTTAGTAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATCATTTGTCAGTTCCTaGGAATGCTTGTTTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLSFVSS*ECLFVK Trigger: CTTGACAAACAAGCATTCTCAGGAACTGACAAATGA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACATACTATGAGGTTATaGGCAGGTTTTAGTTTACCC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLHTMRL*AGFSLP Trigger: GGGTAAACTAAAACCTGCTCATAACCTCATAGTATG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACGTGTAAAGTCCAGTTaGTTAGTAGCATCATCTAGT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLRVKSS*LVASSS Trigger: ACTAGATGATGCTACTAAGCAACTGGACTTTACACG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTGATATTGAACCTGTaGCTGCAAGGCTTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLILNL*LQGFFL Trigger: AAGGAAAAAGCCTTGCAGGCACAGGTTCAATATCAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAACTAAGTCCTTTCTGTaGACTGGATTAGAAACTGAT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLTKSFL*TGLETD Trigger: ATCAGTTTCTAATCCAGTTCACAGAAAGGACTTAGT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATGGTGGATGTTTTGTTaGTGGAGGATTTCTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLWWMFC*WRISKS Trigger: AGATTTAGAAATCCTCCATCAACAAAACATCCACCA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAACTGCAAATTAAACTaGACCTTTGTTCCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLNCKLN*TFVPEP Trigger: TGGTTCAGGAACAAAGGTTCAGTTTAATTTGCAGTT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR TCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACAGAATGATCTCTCCTaGAAATTCAACTTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLQNDLS*KFNFPC Trigger: ACAAGGAAAGTTGAATTTTCAGGAGAGATCATTCTG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGAGAGGTGTGTAAGATaGTTAAAAGGATTTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLERCVR*LKGFVS Trigger: AGAGACAAATCCTTTTAAGCATCTTACACACCTCTC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAGACTCTTTAGAGAATaGTACCAGGTATTGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLRLFRE*YQVLFV Trigger: GACAAACAATACCTGGTAGCATTCTCTAAAGAGTCT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATGGGGGAGTATCAACTaGCTAATATTAGTTACTGAA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLWGSIN*LILVTE Trigger: TTCAGTAACTAATATTAGGCAGTTGATACTCCCCCA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTCCAGAATAGCAAGTaGTTTCAAGTTACTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLFQNSK*FQVTVP Trigger: TGGTACAGTAACTTGAAAGCACTTGCTATTCTGGAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATGCTTTTCTTTCTCGTaGCATTCAACATCTAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLCFSFS*HSTSSV Trigger: TACACTAGATGTTGAATGCCACGAGAAAGAAAAGCA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGTTCTTAAAACAAGCTaGTCCTTATCCTTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLVLKTS*SLSLIS Trigger: GGAAATCAAGGATAAGGACCAGCTTGTTTTAAGAAC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTTGATAATTTCATTTaGCTTCAGAAGTTCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLLDNFI*LQKFCR Trigger: TCTGCAGAACTTCTGAAGGCAAATGAAATTATCAAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAACCTTGGAATTTCTTTaGCATGTTCTTGAGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLTLEFL*HVLEYI Trigger: AATGTACTCAAGAACATGCCAAAGAAATTCCAAGGT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CCA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACAAAAGCACTTAATCTaGTCACATAAAAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MIRISLIRINSFLRTEFLQKHLI*SHKNCP Trigger: TGGACAGTTTTTATGTGACCAGATTAAGTGCTTTTG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS TCA 90 bp | CTGGTGTGCAGAAAAGCCCAACAGGCCCGGCCCTCGGGATTAGCCTaGGAGGTCCGGGTCCTGATAAAGTTTGAGTTTGGCGCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVCRKAQQARPSGLA*EVRVLIKFEFGARL Trigger: AAGCCGAGCGCCAAACTCAAACTTTATCAGGACCCGGACCTCTCAGGCTAATCCCGAGGGCCGGGCCTGTTGGGCTTTTCTGCACACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 90 bp | CTCCTCTCCTCACAGTCTTTGCATTTCACCTGCAACGGGACTAGTTaGTGGAACAGCACTTGGCTCATGTTGGCTCGCTGCCTCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSQSLHFTCNGTS*WNSTWLMLARCLGW Trigger: CCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGACTGTGAGGAGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 90 bp | TCTTTGCATTTCACCTGCAACGGGACTAGTTGGTGGAACAGCACTTaGCTCATGTTGGCTCGCTGCCTCGGCTGGTGTGCAGAAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLHFTCNGTSWWNST*LMLARCLGWCAEKP Trigger: GGGCTTTTCTGCACACCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 90 bp | CTCTCCTCACAGTCTTTGCATTTCACCTGCAACGGGACTAGTTGGTaGAACAGCACTTGGCTCATGTTGGCTCGCTGCCTCGGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSQSLHFTCNGTSW*NSTWLMLARCLGWC Trigger: ACACCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGACTGTGAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 90 bp | GCCCAGGGAAATAGGCTGAAGACGCAGAGGGGAGCGCTGTGGGTTTaGAAGATGTATGTAATGCTCCTAAAGTGCCATCTCTCTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: AQGNRLKTQRGALWV*KMYVMLLKCHLSDG Trigger: ACCATCAGAGAGATGGCACTTTAGGAGCATTACATACATCTTCCAAACCCACAGCGCTCCCCTCTGCGTCTTCAGCCTATTTCCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 90 bp | GTAACTGCCCAGGGAAATAGGCTGAAGACGCAGAGGGGAGCGCTGTaGGTTTGGAAGATGTATGTAATGCTCCTAAAGTGCCATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTAQGNRLKTQRGAL*VWKMYVMLLKCHLS Trigger: AGAGAGATGGCACTTTAGGAGCATTACATACATCTTCCAAACCCACAGCGCTCCCCTCTGCGTCTTCAGCCTATTTCCCTGGGCAGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS GCA 90 bp | CAGGTTAGGAGAAATTCCACTTCTGATTGTGTTGCTGCTGGAATGTaGAGGCGGAGTAGTAGAAGGTCCCAATACATCTTGCTTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QVRRNSTSDCVAAGM*RRSSRRSQYILLSH Trigger: GTGAGAAAGCAAGATGTATTGGGACCTTCTACTACTCCGCCTGCACATTCCAGCAGCAACACAATCAGAAGTGGAATTTCTCCTAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAGCACTTGGCTCATGTaGGCTCGCTGCCTCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLSTWLM*ARCLGW Trigger: CCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGCT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS CCA 90 bp | CTGGAATGCAAATGCAGAGGAGACAGGATAACCAATCCCACAGGTTaGGTAAGTCAGTCTACCATCAACCACATTCAGGTTAGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LECKCRGDRITNPTG*VSQSTINHIQVRRN Trigger: ATTTCTCCTAACCTGAATGTGGTTGATGGTAGACTGACTTACCCAACCTGTGGGATTGGTTATCCTGTCTCCTCTGCATTTGCATTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS GCA 90 bp | ATTTTTGGCAGATATCGAATGAGGGAAGGTATTCTGGAATGCAAATaGAGAGGAGACAGGATAACCAATCCCACAGGTTGGGTAAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFGRYRMREGILECK*RGDRITNPTGWVSQ Trigger: CTGACTTACCCAACCTGTGGGATTGGTTATCCTGTCTCCTCTGCATTTGCATTCCAGAATACCTTCCCTCATTCGATATCTGCCAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTGGTGGAACAGCACTaGGCTCATGTTGGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLLVEQH*AHVGSL Trigger: CAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
||
| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTCTCCTCACAGTCTTaGCATTTCACCTGCAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLLSSQS*HFTCNG Trigger: CCCGTTGCAGGTGAAATGCAAAGACTGTGAGGAGAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACCACTTCTGATTGTGTaGCTGCTGGAATGTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLPLLIV*LLECAG Trigger: GCCTGCACATTCCAGCAGCAACACAATCAGAAGTGG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAGGGAGCGCTGTGGGTTaGGAAGATGTATGTAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLGSAVG*EDVCNA Trigger: AGCATTACATACATCTTCCAAACCCACAGCGCTCCC...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACCTGAGAATGCTTGTTaGTCAAGGCTGCTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLPENAC*SRLLYV Trigger: CACATACAGCAGCCTTGACAAACAAGCATTCTCAGG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAAACCAATCCCACAGGTaGGGTAAGTCAGTCTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLNQSHR*GKSVYH Trigger: ATGGTAGACTGACTTACCCAACCTGTGGGATTGGTT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTGTTCATGCTGCTGTaGATATTGAACCTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLLFMLL*ILNLCL Trigger: CAGGCACAGGTTCAATATCAACAGCAGCATGAACAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATTCTTTGGCATGTTCTaGAGTACATTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLFFGMF*STLLKE Trigger: CTCCTTCAGCAATGTACTCAAGAACATGCCAAAGAA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS TCA 90 bp | TTTTCCTTATCAGTTGAGCAAGGCATACTAATAGTTGCTCCTGACTaGACATCTCCTAGTGATGCATTTGGTTTTGTAAACTGCAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: FSLSVEQGILIVAPD*TSPSDAFGFVNCKL Trigger: TAATTTGCAGTTTACAAAACCAAATGCATCACTAGGAGATGTTCAGTCAGGAGCAACTATTAGTATGCCTTGCTCAACTGATAAGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACCTTTTGTTCCTGGATaGTATCAAATGCCTCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLPFVPG*YQMPLL Trigger: CAAAAGAGGCATTTGATACAATCCAGGAACAAAAGG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAACTAGAATTAACTGTTaGGTAACTGCCCAGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLTRINC*VTAQGN Trigger: ATTTCCCTGGGCAGTTACCAAACAGTTAATTCTAGT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTAACTGTAGCAAAAACCTaGGAATTTCTTTGGCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLTVAKT*EFLWHV Trigger: AACATGCCAAAGAAATTCCAAGGTTTTTGCTACAGT...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTATCCCCTTGTAACTTCTaGATAATTTCATTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLSPCNF*IISFAF Trigger: GAAGGCAAATGAAATTATCAAGAAGTTACAAGGGGA...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS-3UTR CAA 90 bp | ATGATCAGAATCTCCCTCATAAGGATCAACTCTTTCCTTAGAACTGAATTTCTACTTTTCTTCAGGTATTaGGATTCCAACCCTACATTT | + |
|
Preference number: 5 (lower is better) Translates to: MIRISLIRINSFLRTEFLLFFRY*DSNPTF Trigger: AAATGTAGGGTTGGAATCCAAATACCTGAAGAAAAG...TAGAAATTCAGTTCTAAGGAAAGAGTTGATCCTTATGAGGGAGATTCTGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287482.6 |
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| CDS GCA 72 bp | CACTTGGCTCATGTTGGCTCGCTGCCTCGGCTGGTGTaGAGAAAAGCCCAACAGGCCCGGCCCTCGGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: HLAHVGSLPRLV*RKAQQARPSGL Trigger: TAATCCCGAGGGCCGGGCCTGTTGGGCTTTTCTGCACACCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 72 bp | TTCACCTGCAACGGGACTAGTTGGTGGAACAGCACTTaGCTCATGTTGGCTCGCTGCCTCGGCTGGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FTCNGTSWWNST*LMLARCLGWCA Trigger: TGCACACCAGCCGAGGCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 72 bp | CAGTCTTTGCATTTCACCTGCAACGGGACTAGTTGGTaGAACAGCACTTGGCTCATGTTGGCTCGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSLHFTCNGTSW*NSTWLMLARCL Trigger: GAGGCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 72 bp | TCACAGTCTTTGCATTTCACCTGCAACGGGACTAGTTaGTGGAACAGCACTTGGCTCATGTTGGCTCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQSLHFTCNGTS*WNSTWLMLARC Trigger: GCAGCGAGCCAACATGAGCCAAGTGCTGTTCCACCAACTAGTCCCGTTGCAGGTGAAATGCAAAGACTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 72 bp | CAGGGAAATAGGCTGAAGACGCAGAGGGGAGCGCTGTaGGTTTGGAAGATGTATGTAATGCTCCTAAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGNRLKTQRGAL*VWKMYVMLLKC Trigger: GCACTTTAGGAGCATTACATACATCTTCCAAACCCACAGCGCTCCCCTCTGCGTCTTCAGCCTATTTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CAA 90 bp | CCATCAACCACATTCAGGTTAGGAGAAATTCCACTTCTGATTGTGTaGCTGCTGGAATGTGCAGGCGGAGTAGTAGAAGGTCCCAATACA | + |
|
Preference number: 6 (lower is better) Translates to: PSTTFRLGEIPLLIV*LLECAGGVVEGPNT Trigger: TGTATTGGGACCTTCTACTACTCCGCCTGCACATTCCAGCAGCAACACAATCAGAAGTGGAATTTCTCCTAACCTGAATGTGGTTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CAA 72 bp | CAAATGCAGAGGAGACAGGATAACCAATCCCACAGGTaGGGTAAGTCAGTCTACCATCAACCACATTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QMQRRQDNQSHR*GKSVYHQPHSG Trigger: ACCTGAATGTGGTTGATGGTAGACTGACTTACCCAACCTGTGGGATTGGTTATCCTGTCTCCTCTGCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS GCA 72 bp | AGTGTAGAATTCTCTCTTCGCAAAGAGAGGACTTCTTaGTTAGTCCGCTGTAGCTCCTCTTCAACACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SVEFSLRKERTS*LVRCSSSSTPE Trigger: TTCTGGTGTTGAAGAGGAGCTACAGCGGACTAAGCAAGAAGTCCTCTCTTTGCGAAGAGAGAATTCTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS GCA 72 bp | AGAAATTCCACTTCTGATTGTGTTGCTGCTGGAATGTaGAGGCGGAGTAGTAGAAGGTCCCAATACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RNSTSDCVAAGM*RRSSRRSQYIL Trigger: CAAGATGTATTGGGACCTTCTACTACTCCGCCTGCACATTCCAGCAGCAACACAATCAGAAGTGGAATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS GCA 72 bp | AGATATCGAATGAGGGAAGGTATTCTGGAATGCAAATaGAGAGGAGACAGGATAACCAATCCCACAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RYRMREGILECK*RGDRITNPTGW Trigger: CCAACCTGTGGGATTGGTTATCCTGTCTCCTCTGCATTTGCATTCCAGAATACCTTCCCTCATTCGATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CCA 72 bp | AAATGCAGAGGAGACAGGATAACCAATCCCACAGGTTaGGTAAGTCAGTCTACCATCAACCACATTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KCRGDRITNPTG*VSQSTINHIQV Trigger: AACCTGAATGTGGTTGATGGTAGACTGACTTACCCAACCTGTGGGATTGGTTATCCTGTCTCCTCTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CAA 72 bp | ACATTCAGGTTAGGAGAAATTCCACTTCTGATTGTGTaGCTGCTGGAATGTGCAGGCGGAGTAGTAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFRLGEIPLLIV*LLECAGGVVEG Trigger: ACCTTCTACTACTCCGCCTGCACATTCCAGCAGCAACACAATCAGAAGTGGAATTTCTCCTAACCTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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| CDS CAA 90 bp | GCAAGGCTTTTTCCTTTTCATTTGTCAGTTCCTGAGAATGCTTGTTaGTCAAGGCTGCTGTATGTGACGCCCATTCATTCCGTAACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ARLFPFHLSVPENAC*SRLLYVTPIHSVTY Trigger: ATAAGTTACGGAATGAATGGGCGTCACATACAGCAGCCTTGACAAACAAGCATTCTCAGGAACTGACAAATGAAAAGGAAAAAGCCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
||
| CDS TCA 72 bp | TCAGTTGAGCAAGGCATACTAATAGTTGCTCCTGACTaGACATCTCCTAGTGATGCATTTGGTTTTGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVEQGILIVAPD*TSPSDAFGFVN Trigger: GTTTACAAAACCAAATGCATCACTAGGAGATGTTCAGTCAGGAGCAACTATTAGTATGCCTTGCTCAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
||
| CDS CAA 72 bp | AAACCTTGGAATTTCTTTGGCATGTTCTTGAGTACATaGCTGAAGGAGATCTATAAATTTTTGTGGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPWNFFGMFLST*LKEIYKFLWES Trigger: GCTTTCCCACAAAAATTTATAGATCTCCTTCAGCAATGTACTCAAGAACATGCCAAAGAAATTCCAAGGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
||
| CDS CAA 72 bp | TTACCCATTAAAGTTTTCAGATCCCCTTGTAACTTCTaGATAATTTCATTTGCCTTCAGAAGTTCTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPIKVFRSPCNF*IISFAFRSSAD Trigger: ATCTGCAGAACTTCTGAAGGCAAATGAAATTATCAAGAAGTTACAAGGGGATCTGAAAACTTTAATGGGTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287482.6 ENST00000462159.1 |
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