RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SASH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111961

Ensembl transcript IDs: ENST00000367467.8, ENST00000367469.5, ENST00000622663.1, ENST00000635873.1, ENST00000635969.1, ENST00000636279.1, ENST00000637469.1, ENST00000637498.1, ENST00000637729.1

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTaGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACGTCCA +
Preference number: 1 (lower is better)
Translates to: LEERILSPVPRFHAV*PHARPFFWIWSARP
Trigger: TGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR GCA 90 bp ATTTCCTCGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTaGCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: ISSRGLFWRRGSSVL*QGFTLFGHTPGLSS
Trigger: AGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCGAGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 90 bp CCAGGTGTCCAGGCTGCTGGAGGATGGAGACGTGGTGAGAGAGTCTaGGTCATCTTCGGGAGGTTTCTCAGGAGAGCCATCAAAGAAAAG +
Preference number: 1 (lower is better)
Translates to: PGVQAAGGWRRGERV*VIFGRFLRRAIKEK
Trigger: CTTTTCTTTGATGGCTCTCCTGAGAAACCTCCCGAAGATGACTCAGACTCTCTCACCACGTCTCCATCCTCCAGCAGCCTGGACACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR CCA 90 bp GTGCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTaGATCTGGTCTGCACGTCCAGAGATGATGGAGGAATTGCATCAG +
Preference number: 1 (lower is better)
Translates to: VPRFHAVWPHARPFF*IWSARPEMMEELHQ
Trigger: CTGATGCAATTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR GCA 90 bp GATGACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTaGCCCCTACTCCTCCCAGCCTCTACCAGTACACAGAGACAGACT +
Preference number: 1 (lower is better)
Translates to: DDRQKSKGTIRNGTG*PLLLPASTSTQRQT
Trigger: AGTCTGTCTCTGTGTACTGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 90 bp CACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACGTCCAGAGATaGTGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGG +
Preference number: 1 (lower is better)
Translates to: HTPGLSSGSGLHVQR*WRNCISIICTVKGW
Trigger: CCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR GCA 90 bp TCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTaGACGTCCAGAGATGATGGAGGAATTGCATCAGCATCATATGCA +
Preference number: 1 (lower is better)
Translates to: SRCLATRQAFLLDLV*TSRDDGGIASASYA
Trigger: TGCATATGATGCTGATGCAATTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTaGTCTGCACGTCCAGAGATGATGGAGGAATTGCATCAGCATCAT +
Preference number: 1 (lower is better)
Translates to: RFHAVWPHARPFFWI*SARPEMMEELHQHH
Trigger: ATGATGCTGATGCAATTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 90 bp ACTTTTGCTGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTaGAGATGTGGAAGTATGGTTACAGGGTTGTGGACACTAGTTAGA +
Preference number: 1 (lower is better)
Translates to: TFAGNIPERFDVCLS*RCGSMVTGLWTLVR
Trigger: TCTAACTAGTGTCCACAACCCTGTAACCATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCAGCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 90 bp AGCCTCACAGTGACCTTTTGCAAACATGATCCGTTAACTGAGGACTaGATTTTGGGATGGACATGGTCAGGATTCCAAGTCAATACTGCA +
Preference number: 1 (lower is better)
Translates to: SLTVTFCKHDPLTED*ILGWTWSGFQVNTA
Trigger: TGCAGTATTGACTTGGAATCCTGACCATGTCCATCCCAAAATTCAGTCCTCAGTTAACGGATCATGTTTGCAAAAGGTCACTGTGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CCA 90 bp AGTCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTaGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCG +
Preference number: 1 (lower is better)
Translates to: SQYCSATIHTVTILN*LKPKAVTMNTDTHA
Trigger: CGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CAA 90 bp TCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTaGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACGTCC +
Preference number: 2 (lower is better)
Translates to: SGGEDPQSCAKVSRC*ATRQAFLLDLVCTS
Trigger: GGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCTTCTGGATCTGGTCTaGACGTCCAGAGATGATGGA +
Preference number: 2 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRLLDLV*TSRDDG
Trigger: TCCATCATCTCTGGACGTGCAGACCAGATCCAGAAG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCAGGTTTCACGCTGTTTaGCCACACGCCAGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: TDRRARALSEMEQAAPYSRFHAV*PHARPF
Trigger: GAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGCATCATATGCACAGTaGAAGGGTGGCTCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAASYAQ*KGGSCP
Trigger: TGGACAAGAGCCACCCTTTCACTGTGCATATGATGC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCTTCTGGATCTGGTCTaGACGTCCAGAGATGATGGA +
Preference number: 2 (lower is better)
Translates to: TDRRARALSEMEQAAPYSLLDLV*TSRDDG
Trigger: TCCATCATCTCTGGACGTGCAGACCAGATCCAGAAG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGCCAGGCCTTTCTTCTaGATCTGGTCTGCACGTCCA +
Preference number: 2 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSARPFF*IWSARP
Trigger: TGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CAA 90 bp CCTTTCTTCTGGATCTGGTCTGCACGTCCAGAGATGATGGAGGAATaGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PFFWIWSARPEMMEE*HQHHMHSERVALVQ
Trigger: CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGAAATGGAACAGGCTaGCCCCTACTCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRNGTG*PLLLPA
Trigger: GGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGCCAGGCCTTTCTTCTaGATCTGGTCTGCACGTCCA +
Preference number: 2 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYARPFF*IWSARP
Trigger: TGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGGATCCTCAGTCCTGTaGCAAGGTTTCACGCTGTTT +
Preference number: 2 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSGSSVL*QGFTLF
Trigger: AAACAGCGTGAAACCTTGGCACAGGACTGAGGATCC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCTGCACGTCCAGAGATaGTGGAGGAATTGCATCAGC +
Preference number: 2 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHLHVQR*WRNCIS
Trigger: GCTGATGCAATTCCTCCATCATCTCTGGACGTGCAG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTGCATCAGCATCATATaGACAGTGAAAGGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYCISII*TVKGWL
Trigger: GAGCCACCCTTTCACTGTGCATATGATGCTGATGCA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCCTTTCTTCTGGATCTaGTCTGCACGTCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTPFFWI*SARPEM
Trigger: CATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGCATCATATGCACAGTaGAAGGGTGGCTCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHASYAQ*KGGSCP
Trigger: TGGACAAGAGCCACCCTTTCACTGTGCATATGATGC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CAA 90 bp ACCCTAATTAGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTaGTGTAACCTCTTAAACTTCACCGACTCCTCAGTCTCATCATCC +
Preference number: 2 (lower is better)
Translates to: TLISFFLTLRVEFTS*CNLLNFTDSSVSSS
Trigger: GGATGATGAGACTGAGGAGTCGGTGAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACTAATTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTGCATCAGCATCATATaGACAGTGAAAGGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHCISII*TVKGWL
Trigger: GAGCCACCCTTTCACTGTGCATATGATGCTGATGCA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR GCA 90 bp AGTCTGAGTCATCTTCGGGAGGTTTCTCAGGAGAGCCATCAAAGAAAAGGGGCTATTGTTCTCTTGAATTaGAGTTTGATGAGCCATCAA +
Preference number: 2 (lower is better)
Translates to: SLSHLREVSQESHQRKGAIVLLN*SLMSHQ
Trigger: TTGATGGCTCATCAAACTGCAATTCAAGAGAACAAT...AGCCCCTTTTCTTTGATGGCTCTCCTGAGAAACCTCCCGAAGATGACTCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGTGAAAGGGTGGCTCTaGTCCAGAGAGGCCCATTCC +
Preference number: 3 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAVKGWL*SREAHS
Trigger: GGAATGGGCCTCTCTGGACAAGAGCCACCCTTTCAC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 72 bp CAGGCTGCTGGAGGATGGAGACGTGGTGAGAGAGTCTaGGTCATCTTCGGGAGGTTTCTCAGGAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: QAAGGWRRGERV*VIFGRFLRRAI
Trigger: GATGGCTCTCCTGAGAAACCTCCCGAAGATGACTCAGACTCTCTCACCACGTCTCCATCCTCCAGCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR CCA 72 bp AGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTaGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCT +
Preference number: 3 (lower is better)
Translates to: RILSPVPRFHAV*PHARPFFWIWS
Trigger: AGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR CCA 72 bp TTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTaGATCTGGTCTGCACGTCCAGAGATGATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: FHAVWPHARPFF*IWSARPEMMEE
Trigger: TTCCTCCATCATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAAGCATTCGCAGCCAGTaGGCATCTTGGTTCTTTTGT +
Preference number: 3 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPSIRSQ*ASWFFC
Trigger: ACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCT...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp GTAGAGGGCGGACCGTTCATCCAGGACCGGCGAATTCTCAAACACGTGCTCCTCGATTGTTCTCTTGAATaGCAGTTTGATGAGCCATCA +
Preference number: 3 (lower is better)
Translates to: VEGGPFIQDRRILKHVLLDCSLE*QFDEPS
Trigger: TGATGGCTCATCAAACTGCAATTCAAGAGAACAATC...GAGGAGCACGTGTTTGAGAATTCGCCGGTCCTGGATGAACGGTCCGCCCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR-3UTR CAA 90 bp AGTAGAGGGCGGACCGTTCATCCAGGACCGGCGAATTCTCAAACACGTGCTCCTGTGGAGTTTACCAGCTaGTGTAACCTCTTAAACTTC +
Preference number: 3 (lower is better)
Translates to: SRGRTVHPGPANSQTRAPVEFTS*CNLLNF
Trigger: GAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCAC...AGGAGCACGTGTTTGAGAATTCGCCGGTCCTGGATGAACGGTCCGCCCTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGAGATGATGGAGGAATaGCATCAGCATCATATGCAC +
Preference number: 3 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAEMMEE*HQHHMH
Trigger: GTGCATATGATGCTGATGCAATTCCTCCATCATCTC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGTGCTTGTCTTGTCTTaGGGGGTCAAAGAGAACCGC +
Preference number: 3 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSVLVLS*GVKENR
Trigger: GCGGTTCTCTTTGACCCCCAAAGACAAGACAAGCAC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCAGCCAGTTGGCATCTaGGTTCTTTTGTCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: TDRRARALSEMEQAAPYSQPVGI*VLLSSE
Trigger: TTCAGAAGACAAAAGAACCAAGATGCCAACTGGCTG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGTGAAAGGGTGGCTCTaGTCCAGAGAGGCCCATTCC +
Preference number: 3 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHVKGWL*SREAHS
Trigger: GGAATGGGCCTCTCTGGACAAGAGCCACCCTTTCAC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR TCA 72 bp GGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTaGAGATGTGGAAGTATGGTTACAGGGTTGTGGACA +
Preference number: 3 (lower is better)
Translates to: GNIPERFDVCLS*RCGSMVTGLWT
Trigger: TGTCCACAACCCTGTAACCATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACAAGGTTTCACGCTGTTaGGCCACACGCCAGGCCTTT +
Preference number: 3 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHKVSRC*ATRQAF
Trigger: AAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGTGCTTGTCTTGTCTTaGGGGGTCAAAGAGAACCGC +
Preference number: 3 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHVLVLS*GVKENR
Trigger: GCGGTTCTCTTTGACCCCCAAAGACAAGACAAGCAC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp TCTTCCACCCTAATTAGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTTGATGAGCCATCAAACGTaGGGTAAGAACCATCTGGCC +
Preference number: 3 (lower is better)
Translates to: SSTLISFFLTLRVEFTSLMSHQT*GKNHLA
Trigger: GGCCAGATGGTTCTTACCCAACGTTTGATGGCTCAT...CAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACTAATTAGGGTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGAGATGATGGAGGAATaGCATCAGCATCATATGCAC +
Preference number: 3 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYEMMEE*HQHHMH
Trigger: GTGCATATGATGCTGATGCAATTCCTCCATCATCTC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp TCCACCCTAATTAGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTTGTGTCTCTTGAATTGCAGTTaGATGAGCCATCAAACGTTG +
Preference number: 3 (lower is better)
Translates to: STLISFFLTLRVEFTSLCLLNCS*MSHQTL
Trigger: CAACGTTTGATGGCTCATCAAACTGCAATTCAAGAG...ACACAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACTAATTAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
3UTR CCA 72 bp TGCAGCGCGACGATCCACACAGTAACGATACTAAACTaGTTAAAACCAAAAGCAGTCACTATGAATACAGAC +
Preference number: 3 (lower is better)
Translates to: CSATIHTVTILN*LKPKAVTMNTD
Trigger: GTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
3UTR-3UTR CAA 90 bp TTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTTGTGTAACCTCTTAAACTTCCATCCGATTGTTCTCTaGAATTGCAGTTTGATGAGC +
Preference number: 3 (lower is better)
Translates to: FFLTLRVEFTSLCNLLNFHPIVL*NCSLMS
Trigger: GCTCATCAAACTGCAATTCAAGAGAACAATCGGATG...GAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR GCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGGGCTGCCAGGCGCCTaGCCTGAGAGAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRGLPGA*PERGLG
Trigger: TCCCAGGCCTCTCTCAGGGCAGGCGCCTGGCAGCCC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACGGCCTTGTGCTTGGTaGGCTGCCAGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPRPCAW*AARRLP
Trigger: GGGCAGGCGCCTGGCAGCCCACCAAGCACAAGGCCG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGGGCGGCCTTGTGCTTaGTGGGCTGCCAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVGRPCA*WAARRL
Trigger: CAGGCGCCTGGCAGCCCACCAAGCACAAGGCCGCCC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGGGCGGCCTTGTGCTTaGTGGGCTGCCAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPGRPCA*WAARRL
Trigger: CAGGCGCCTGGCAGCCCACCAAGCACAAGGCCGCCC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACCGCGGTGGAGAGGGTaGCGGCGTACATGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPPRWRG*RRTWAD
Trigger: GTCTGCCCATGTACGCCGGCACCCTCTCCACCGCGG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGGCCCATTCCGGGCCTaGCTACATGGCCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPGPFRA*LHGLRA
Trigger: GGCCCTGAGGCCATGTAGCCAGGCCCGGAATGGGCC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GTAGAGGGCGGACCGTTCATCCAGGACCGGCGAATTCTCAAACACGTGCTCCTCGCAGCCGACTGCCGGTaGTGGGCCTCGTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VEGGPFIQDRRILKHVLLAADCR*WASYSL
Trigger: CAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGC...GAGGAGCACGTGTTTGAGAATTCGCCGGTCCTGGATGAACGGTCCGCCCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGCCGACTGCCGGTGCTaGGCCTCGTATTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRADCRC*ASYSLS
Trigger: GCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCATGGCGCATCGGGACTaGGGAGGGCCCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSMAHRD*GGPHWG
Trigger: GCCCCAGTGGGGCCCTCCCCAGTCCCGATGCGCCAT...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACTTGGCTCAGTGTGCTaGAGCCCGCGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSALGSVC*SPRWRG
Trigger: CCCTCTCCACCGCGGGCTTCAGCACACTGAGCCAAG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCGGGGTGAAGTCGGTGTaGACCCTGGCACGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSGVKSV*TLARPQ
Trigger: CTGCGGGCGTGCCAGGGTGCACACCGACTTCACCCC...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGGGGCTGGGCCTTCGTaGAAGAGGCGGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPGAGPS*KRRSSS
Trigger: AGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACCCCACTGGGGCCCATaGGAACAGGGTGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAPHWGP*EQGGVR
Trigger: ACGGACTCCACCCTGTTCCCATGGGCCCCAGTGGGG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGGACCGCAGCTGAAGTaGCGTGGGGCTAGCATCGGG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAGPQLK*RGASIG
Trigger: CCCGATGCTAGCCCCACGTCACTTCAGCTGCGGTCC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGCACCAGGCTCCACTTaGAGGTCATCCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRAPGST*RSSREW
Trigger: CCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGGCGGGTGGACCACCTaGGGTCAGGAGTTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPGGWTT*GQELSL
Trigger: CAAACTCAACTCCTGACCTCAGGTGGTCCACCCGCC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCAGGCCTGGGAGCCAGTaGTGGGGGACAGTCGCTAGG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLARPGSQ*WGTVAR
Trigger: CCTAGCGACTGTCCCCCAGCACTGGCTCCCAGGCCT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTTCTTGTGCACGCCAGAGTAGAGGGCGGACCGTTCATCCAGGACCGGCGAATTCAGGCTGCTGGAGGATaGAGACGTGGTGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLVHARVEGGPFIQDRRIQAAGG*RRGERV
Trigger: GACTCTCTCACCACGTCTCCATCCTCCAGCAGCCTG...AATTCGCCGGTCCTGGATGAACGGTCCGCCCTCTACTCTGGCGTGCACAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATCCGACGCCTCCTGGTaGGGCGTTTGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPSDASW*GVWVSP
Trigger: AGGAGAAACCCAAACGCCCCACCAGGAGGCGTCGGA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGATCCTCCACAGACTTaGGCTGGGGTGGTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRDPPQT*AGVVVL
Trigger: AAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACAAGTGTCCACAGTCTaGGGGCCCTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPQVSTV*GPSRVS
Trigger: TGAGACCCTGGAGGGCCCCCAGACTGTGGACACTTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCCCATGGGAACAGGGTaGAGTCCGTTAGCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRPMGTG*SPLARR
Trigger: ACGCCTTGCTAACGGACTCCACCCTGTTCCCATGGG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCCCCACTGGGGCCCATaGGAACAGGGTGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSPHWGP*EQGGVR
Trigger: ACGGACTCCACCCTGTTCCCATGGGCCCCAGTGGGG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACACAGGAGACCTTCCTaGTCAAAGCCGGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPHRRPS*SKPGPA
Trigger: AGCTGGGCCCGGCTTTGACCAGGAAGGTCTCCTGTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCGGATCTGGTCCATGTTaGCGGCGACGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSGSGPC*RRRPAR
Trigger: CCGAGCGGGACGTCGCCGCCAACATGGACCAGATCC...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCTTCACCCGGATCTaGTCCATGTTGGCGGCGACG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVCFTRI*SMLAAT
Trigger: CGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCATGGCCTCAGGGCCTaGCGGCAGTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRHGLRA*RQFEES
Trigger: AGACTCTTCAAACTGCCGCCAGGCCCTGAGGCCATG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTCCACTTCTGGGGTTaGCACGGCGCTACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVFHFWG*HGATEA
Trigger: GGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGTGGTGCTCACTGTTTaGCCGCTCATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVVVLTV*PLMELC
Trigger: GCAGAGCTCCATGAGCGGTCAAACAGTGAGCACCAC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRFPVAG*GISGAH
Trigger: GTGAGCACCACTGATTCCTCAACCAGCAACCGGGAA...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCTTCTCCTGGGATCCTaGCTGGTCGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRLLLGS*LVAVTV
Trigger: GACAGTAACAGCGACCAGTCAGGATCCCAGGAGAAG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGGGCATCCTGCAAGATaGCAGACAGAAGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRGHPAR*QTEEQG
Trigger: CCCTTGCTCTTCTGTCTGTCATCTTGCAGGATGCCC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCCGCTCATGGAGCTCTaGCCACTGAGAGAACTGCGA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVPLMEL*PLRELR
Trigger: TCGCAGTTCTCTCAGTGGGCAGAGCTCCATGAGCGG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATCGGTAGGCACGTCTTaGTCAGCACCAGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPSVGTS*SAPGST
Trigger: AGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAATCGCCATGCGGTGCTaGTTCCGAAGCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPIAMRC*FRSCFT
Trigger: GGTGAAGCAGCTTCGGAAGCAGCACCGCATGGCGAT...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGGAATCGCCATGCGGTaGTGCTTCCGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVGIAMR*CFRSCF
Trigger: GAAGCAGCTTCGGAAGCAGCACCGCATGGCGATTCC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCAGAAATGGAACAGGCTaGCCCCTACTCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRNGTG*PLLLPA
Trigger: GGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTTTCCGACGCCTCCTaGTGGGGCGTTTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLSDAS*WGVWVS
Trigger: AGAAACCCAAACGCCCCACCAGGAGGCGTCGGAAAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACATCCACTCAGGCCCTaGCTGTCAACGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPHPLRP*LSTSSF
Trigger: GAAGCTGCTCGTTGACAGCCAGGGCCTGAGTGGATG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGCTCTTGGACGTGTCTaGGGCAAGGCCACCACCCAG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAALGRV*GKATTQ
Trigger: CTGGGTGGTGGCCTTGCCCCAGACACGTCCAAGAGC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCACCAGTCACACCAGGTaGGTCACAGCTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRTSHTR*VTALGR
Trigger: ACGTCCAAGAGCTGTGACCCACCTGGTGTGACTGGT...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCAGGTCATCCAGGGAATaGGATCGGGGCCAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRSSRE*DRGQVS
Trigger: GGACACTTGGCCCCGATCCCATTCCCTGGATGACCT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACATGGCCTCAGGGCCTaGCGGCAGTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPHGLRA*RQFEES
Trigger: AGACTCTTCAAACTGCCGCCAGGCCCTGAGGCCATG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCATCTGGGACCGCAGCTaGAGTGACGTGGGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAIWDRS*SDVGLA
Trigger: TGCTAGCCCCACGTCACTTCAGCTGCGGTCCCAGAT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCATCTCCCCCTCGGTaGGGGAGCGGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSSSPPR*GSGTLS
Trigger: AGAAAGTGTCCCGCTCCCTCACCGAGGGGGAGATGA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGGAGCTCTGCCCACTaGGAGAACTGCGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRWSSAH*ENCEDF
Trigger: AAAGTCTTCGCAGTTCTCTCAGTGGGCAGAGCTCCA...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTTCTCCTGGGATCCTaGCTGGTCGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLLLGS*LVAVTV
Trigger: GACAGTAACAGCGACCAGTCAGGATCCCAGGAGAAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCACGTCCCGCTCGGGCTaGTCCAAGTCCTCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLATSRSG*SKSSAY
Trigger: ATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTTCGGCAGATTTCCGTaGGTCCACCACTTGGAATCG +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRFGRFP*VHHLES
Trigger: CGATTCCAAGTGGTGGACTCACGGAAATCTGCCGAA...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTGTGTCTCTCCTCTGTaGTGCCGGCCTCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSCVSPL*CRPPEG
Trigger: GCCTTCAGGAGGCCGGCATCACAGAGGAGAGACACA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGGCCTGGCGGCAGTTTaGAGAGTCTGGCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAGLAAV*RVWLQI
Trigger: TATCTGCAGCCAGACTCTTCAAACTGCCGCCAGGCC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGGGGTGAAGTCGGTGTaGACCCTGGCACGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSGVKSV*TLARPQ
Trigger: CTGCGGGCGTGCCAGGGTGCACACCGACTTCACCCC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACCCTCCTCCTGTCCCTaGTTCAGTGCATCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAPSSCP*FSASPD
Trigger: ATCAGGGGATGCACTGAAGCAGGGACAGGAGGAGGG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACCCAGCTTCACACCGTaGTCCTGGAGGCTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAPSFTP*SWRLVF
Trigger: GAACACAAGCCTCCAGGAGCACGGTGTGAAGCTGGG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACTGATCCAAGTCCTCTaGGTATCTCTGCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLIQVL*VSLHQG
Trigger: GCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATGCTGCTTCCGAAGCTaGTTCACCCGGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSACCFRS*FTRIWS
Trigger: GGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTGACACAGACGAAATaGACCCAGGAGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLTQTK*TQERRA
Trigger: AGCCCGTCTCTCCTGGGTGCATTTCGTCTGTGTCAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCCAGCAGTCCCCGTTTaGAGGACATCTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRPAVPV*RTSLNH
Trigger: GTGATTCAGAGATGTCCTGCAAACGGGGACTGCTGG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCATCTACCCCTTCTTTaGTGCCCAGGGGATGGTGTG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVHLPLL*CPGDGV
Trigger: CACACCATCCCCTGGGCACCAAAGAAGGGGTAGATG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATGGGGAGGGCCCCACTaGGGCCCATGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRWGGPH*GPWEQG
Trigger: ACCCTGTTCCCATGGGCCCCAGTGGGGCCCTCCCCA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGTGGGGAGGGCCCCACTaGGGCCCATGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQWGGPH*GPWEQG
Trigger: ACCCTGTTCCCATGGGCCCCAGTGGGGCCCTCCCCA...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCTTTCACTGGCAGGCATaGCGCATCGGGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAFHWQA*RIGTGE
Trigger: CTCCCCAGTCCCGATGCGCCATGCCTGCCAGTGAAA...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGCCCATTCCGGGCCTaGCTACATGGCCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGPFRA*LHGLRA
Trigger: GGCCCTGAGGCCATGTAGCCAGGCCCGGAATGGGCC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCCTTTCACAGGCCACTaGAACTCTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVPFTGH*NSAYPR
Trigger: TCTGGGGTAGGCAGAGTTCCAGTGGCCTGTGAAAGG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCACGGGCTGCGCGACTaGCAACTCCAGAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAHGLRD*QLQKLS
Trigger: GGAAAGTTTCTGGAGTTGTCAGTCGCGCAGCCCGTG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCGTGGTGAGAGAGTCTaGGTCATCTTCGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRGERV*VIFGRF
Trigger: AAACCTCCCGAAGATGACTCAGACTCTCTCACCACG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp CGTTCATCCAGGACCGGCGAATTCTCAAACACGTGCTCCTCCCCACCTTCAGTGCGTGGTGAGAGAGTCTaGGTCATCTTCGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RSSRTGEFSNTCSSPPSVRGERV*VIFGRF
Trigger: AAACCTCCCGAAGATGACTCAGACTCTCTCACCACG...CACTGAAGGTGGGGAGGAGCACGTGTTTGAGAATTCGCCGGTCCTGGATGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCTTCGGGGTCGGGCTGTaGAGGCGGAGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTFGVGL*RRRGAR
Trigger: CCTGGCTCCCCTCCGCCTTCACAGCCCGACCCCGAA...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAFPVAG*GISGAH
Trigger: GTGAGCACCACTGATTCCTCAACCAGCAACCGGGAA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCACCAGAGGCTGCGATTaGGCCCTCCAGTTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVTRGCD*ALQFLS
Trigger: ACTAAGAAACTGGAGGGCTCAATCGCAGCCTCTGGT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACTTGGCTCAGTGTGCTaGAGCCCGCGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRLGSVC*SPRWRG
Trigger: CCCTCTCCACCGCGGGCTTCAGCACACTGAGCCAAG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGTCATCTTCGGGAGGTTTCTCAGGAGAGCCATCAAAGAAAAGGGGCTTCTTGTTCCAGGGCAGCCGACTaGCGGTGCTGGGCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: SHLREVSQESHQRKGASCSRAAD*RCWASY
Trigger: ATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGA...ACAAGAAGCCCCTTTTCTTTGATGGCTCTCCTGAGAAACCTCCCGAAGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR GCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCAAGGCCCGAGTCCTaGTCAGAGACAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSSRPES*SETELL
Trigger: CAGCAGCTCTGTCTCTGAGCAGGACTCGGGCCTTGA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCCCTCCTCCTGTCCCTaGTTCAGTGCATCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAPSSCP*FSASPD
Trigger: ATCAGGGGATGCACTGAAGCAGGGACAGGAGGAGGG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCGGTAGGCACGTCTTaGTCAGCACCAGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSSVGTS*SAPGST
Trigger: AGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCCGCGGTGGAGAGGGTaGCGGCGTACATGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYPRWRG*RRTWAD
Trigger: GTCTGCCCATGTACGCCGGCACCCTCTCCACCGCGG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGTCGGTGTGCACCCTaGCACGCCCGCAGAACGGGC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYSRCAP*HARRTG
Trigger: GCCCGTTCTGCGGGCGTGCCAGGGTGCACACCGACT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCCAGGTCCCCATGGGTaGCTTGCTGATTATATCGAT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRPGPHG*LADYID
Trigger: ATCGATATAATCAGCAAGCCACCCATGGGGACCTGG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCACAGACTTGGGCTaGGGTGGTCGTCCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSSTDLG*GGRPFR
Trigger: TCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTCCTGGGATCCTGACTaGTCGCTGTTACTGTCATAC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRSWDPD*SLLLSY
Trigger: GTATGACAGTAACAGCGACCAGTCAGGATCCCAGGA...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCATCCACTCAGGCCCTaGCTGTCAACGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSHPLRP*LSTSSF
Trigger: GAAGCTGCTCGTTGACAGCCAGGGCCTGAGTGGATG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATTGGTGCCCAGGGGATaGTGTGTTCCTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLVPRG*CVPSNS
Trigger: CGAGTTTGAAGGAACACACCATCCCCTGGGCACCAA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACATCTACCCCTTCTTTaGTGCCCAGGGGATGGTGTG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAHLPLL*CPGDGV
Trigger: CACACCATCCCCTGGGCACCAAAGAAGGGGTAGATG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCCTGGGAGCCAGTGCTaGGGGACAGTCGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSPGSQC*GTVARA
Trigger: AGCCCTAGCGACTGTCCCCCAGCACTGGCTCCCAGG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCGGCCTTGTGCTTGGTaGGCTGCCAGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRPCAW*AARRLP
Trigger: GGGCAGGCGCCTGGCAGCCCACCAAGCACAAGGCCG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGATCTGGTCCATGTTaGCGGCGACGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGSGPC*RRRPAR
Trigger: CCGAGCGGGACGTCGCCGCCAACATGGACCAGATCC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCCGGGCCTGGCTACATaGCCTCAGGGCCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTPGLAT*PQGLAA
Trigger: TGCCGCCAGGCCCTGAGGCCATGTAGCCAGGCCCGG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACATAGGGACTGGGGGTaGAGTCGGTGTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRHRDWG*SRCAPW
Trigger: CCAGGGTGCACACCGACTTCACCCCCAGTCCCTATG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGCAGACCGATGGAAATaGGCCAATCTGACACAGACG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAADRWK*ANLTQT
Trigger: CGTCTGTGTCAGATTGGCTCATTTCCATCGGTCTGC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGCATCATATGCACAGTaGAAGGGTGGCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVASYAQ*KGGSCP
Trigger: TGGACAAGAGCCACCCTTTCACTGTGCATATGATGC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGGGCATCCTGCAAGATaGCAGACAGAAGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAGHPAR*QTEEQG
Trigger: CCCTTGCTCTTCTGTCTGTCATCTTGCAGGATGCCC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTGAAAACCCAGGTTTaGAATCCCACGGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLKTQV*NPTALT
Trigger: TGTCAGAGCCGTGGGATTTCAAACCTGGGTTTTCAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCAGCCGACTGCCGGTaGTGGGCCTCGTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRAADCR*WASYSL
Trigger: CAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp CAGGACCGGCGAATTCTCAAACACGTGCTCCTCCCCACCTTCAGTGCTGGGTTTGAATTCTCAAACACGTaGTCCTCCCCACCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QDRRILKHVLLPTFSAGFEFSNT*SSPPSV
Trigger: CACTGAAGGTGGGGAGGAGCACGTGTTTGAGAATTC...AAACCCAGCACTGAAGGTGGGGAGGAGCACGTGTTTGAGAATTCGCCGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATTGGGCTGCATTCTCTaGTCAGCATCTACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLGCIL*SASTPS
Trigger: AGAAGGGGTAGATGCTGAGCAGAGAATGCAGCCCAA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGGCTGCCAGGCGCCTaGCCTGAGAGAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGLPGA*PERGLG
Trigger: TCCCAGGCCTCTCTCAGGGCAGGCGCCTGGCAGCCC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATTGTGCTTGGTGGGCTaGCAGGCGCCTGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRLCLVG*QAPALR
Trigger: TCTCAGGGCAGGCGCCTGGCAGCCCACCAAGCACAA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGTTGTGCTTGGTGGGCTaGCAGGCGCCTGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQLCLVG*QAPALR
Trigger: TCTCAGGGCAGGCGCCTGGCAGCCCACCAAGCACAA...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTTCTGGATCTGGTCTaGACGTCCAGAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLLDLV*TSRDDG
Trigger: TCCATCATCTCTGGACGTGCAGACCAGATCCAGAAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGGCCCTCGGGCATCCTaGAAGATGACAGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAGPRAS*KMTDRR
Trigger: TCTTCTGTCTGTCATCTTGCAGGATGCCCGAGGGCC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCGGCCCTCGGGCATCCTaGAAGATGACAGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSGPRAS*KMTDRR
Trigger: TCTTCTGTCTGTCATCTTGCAGGATGCCCGAGGGCC...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGGTTGAGGAATCAGTaGTGCTCACTGTTTGACCGC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVWLRNQ*CSLFDR
Trigger: GCGGTCAAACAGTGAGCACCACTGATTCCTCAACCA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCGCTTTCCCGGTTGCTaGTTGAGGAATCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSRFPGC*LRNQWC
Trigger: GCACCACTGATTCCTCAACCAGCAACCGGGAAAGCG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGTCGGTGTGCACCCTaGCACGCCCGCAGAACGGGC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTSRCAP*HARRTG
Trigger: GCCCGTTCTGCGGGCGTGCCAGGGTGCACACCGACT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACCAGGTCCCCATGGGTaGCTTGCTGATTATATCGAT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPPGPHG*LADYID
Trigger: ATCGATATAATCAGCAAGCCACCCATGGGGACCTGG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATCAAGCTGGGCTCGGTaGATGACTTGGCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSASSWAR*MTWQIG
Trigger: TCCTATCTGCCAAGTCATCCACCGAGCCCAGCTTGA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGAGCATCATAGTTTCTaGGCAAACACTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVEHHSF*ANTEGV
Trigger: CACCCCCTCAGTGTTTGCCCAGAAACTATGATGCTC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGTTCTCTGCTCTTTTTaGCAGGAACAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVVLCSF*QEQVEA
Trigger: AGCCTCCACCTGTTCCTGCCAAAAAGAGCAGAGAAC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACATGGCGCATCGGGACTaGGGAGGGCCCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHMAHRD*GGPHWG
Trigger: GCCCCAGTGGGGCCCTCCCCAGTCCCGATGCGCCAT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCTGCCCCTTTTCACTaGCAGGCATGGCGCATCGGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRAAPFH*QAWRIG
Trigger: CCCGATGCGCCATGCCTGCCAGTGAAAAGGGGCAGC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGCTGCCCCTTTTCACTaGCAGGCATGGCGCATCGGG +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQAAPFH*QAWRIG
Trigger: CCCGATGCGCCATGCCTGCCAGTGAAAAGGGGCAGC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCCTGGGAGCCAGTGCTaGGGGACAGTCGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYPGSQC*GTVARA
Trigger: AGCCCTAGCGACTGTCCCCCAGCACTGGCTCCCAGG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCCGGGCCTGGCTACATaGCCTCAGGGCCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHPGLAT*PQGLAA
Trigger: TGCCGCCAGGCCCTGAGGCCATGTAGCCAGGCCCGG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCCTTTCTTCTGGATCTaGTCTGCACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVPFFWI*SARPEM
Trigger: CATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGGGCACTATCAGAAATaGAACAGGCTGCCCCCTACT +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAGHYQK*NRLPPT
Trigger: AGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGCGAGAGGCAGTAGGTaGTTTGATGACTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRARGSR*FDDFFV
Trigger: TACAAAGAAGTCATCAAATCACCTACTGCCTCTCGC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACCCCATCTTCCGACTTaGCGCTTTCCCGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRPHLPT*RFPGCW
Trigger: CCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTACGTCCCGCTCGGGCTaGTCCAAGTCCTCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSTSRSG*SKSSAY
Trigger: ATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCTGCACGTCCAGAGATaGTGGAGGAATTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSLHVQR*WRNCIS
Trigger: GCTGATGCAATTCCTCCATCATCTCTGGACGTGCAG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACAAAAGCAGTCACTATaGATACAGACACACACGCGC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPQKQSL*IQTHTR
Trigger: GCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGAACGCCTCGGATGTaGCAGCACCCGGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYRTPRM*QHPAWA
Trigger: AGCCCAAGCCGGGTGCTGGCACATCCGAGGCGTTCT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCTCCAGGGCAGCCGACTaGCGGTGCTGGGCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTSRAAD*RCWASY
Trigger: ATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGA...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGAATTCTCAAACACGTaGTCCTCCCCACCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAEFSNT*SSPPSV
Trigger: CACTGAAGGTGGGGAGGAGCACGTGTTTGAGAATTC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACAAATCCTCCAAAACTaGAGGTTCTCCCGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPQILQN*RFSRGL
Trigger: TAAGCCACGGGAGAACCTGCAGTTTTGGAGGATTTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTTTCCAGGTTCTCACTaGTTTCGTAGCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRFPGSH*FRSILS
Trigger: ACTCAGGATGCTACGAAAGCAGTGAGAACCTGGAAA...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGGCCTGGGAGCCAGTaGTGGGGGACAGTCGCTAGG +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRPGSQ*WGTVAR
Trigger: CCTAGCGACTGTCCCCCAGCACTGGCTCCCAGGCCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATCAGCATCATATaGACAGTGAAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVCISII*TVKGWL
Trigger: GAGCCACCCTTTCACTGTGCATATGATGCTGATGCA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATCCACTTCCAGGTCCTaGGAAACCCGCCGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRSTSRS*ETRRFR
Trigger: GCGGAAACGGCGGGTTTCCCAGGACCTGGAAGTGGA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCACCTCGGGTCTAGGTaGCCACGGGCTGCGCGACTG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHHLGSR*PRAARL
Trigger: CAGTCGCGCAGCCCGTGGCCACCTAGACCCGAGGTG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCTGCAGGTTCTCCCGTaGCTTAGGGACCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYLQVLP*LRDPRP
Trigger: GGGTCTCGGGTCCCTAAGCCACGGGAGAACCTGCAG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGCTCTTGGACGTGTCTaGGGCAAGGCCACCACCCAG +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYALGRV*GKATTQ
Trigger: CTGGGTGGTGGCCTTGCCCCAGACACGTCCAAGAGC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGTGGGTCACAGCTCTTaGACGTGTCTGGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQVGHSS*TCLGQG
Trigger: GCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCAC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCAAGTGTCCACAGTCTaGGGGCCCTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSQVSTV*GPSRVS
Trigger: TGAGACCCTGGAGGGCCCCCAGACTGTGGACACTTG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCTTGGTGCCCAGGGGATaGTGTGTTCCTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLALVPRG*CVPSNS
Trigger: CGAGTTTGAAGGAACACACCATCCCCTGGGCACCAA...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTTGCTTCACCCGGATCTaGTCCATGTTGGCGGCGACG +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSCFTRI*SMLAAT
Trigger: CGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCA...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGGGCACTATCAGAAATaGAACAGGCTGCCCCCTACT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAGHYQK*NRLPPT
Trigger: AGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCAGAACCCCCGGCCTTaGGCTTGGGCTTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYQNPRP*AWACPS
Trigger: ACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTTCTTGAGCTTGAGTaGGTCTGTGTCATAGGGACT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVFLELE*VCVIGT
Trigger: AGTCCCTATGACACAGACTCACTCAAGCTCAAGAAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGTGTTCCGGGTCCCTaGTATTTAACTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVCVPGP*YLTHPS
Trigger: ACTTGGATGAGTTAAATATCAGGGACCCGGAACACA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATGTGTTCCGGGTCCCTaGTATTTAACTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPCVPGP*YLTHPS
Trigger: ACTTGGATGAGTTAAATATCAGGGACCCGGAACACA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCACCAGGCTCCACTTaGAGGTCATCCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRAPGST*RSSREW
Trigger: CCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTGTGTCTCTCCTCTGTaGTGCCGGCCTCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYCVSPL*CRPPEG
Trigger: GCCTTCAGGAGGCCGGCATCACAGAGGAGAGACACA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGGCCTGGCGGCAGTTTaGAGAGTCTGGCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSGLAAV*RVWLQI
Trigger: TATCTGCAGCCAGACTCTTCAAACTGCCGCCAGGCC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCACACATGGCAGCAGTaGCTTGGCAAGTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAHTWQQ*LGKLTF
Trigger: AAAGGTCAACTTGCCAAGTCACTGCTGCCATGTGTG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGAAATCCCACGGCTCTaGCACCAACAGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAEIPRL*HQQQAF
Trigger: AAAAGCTTGCTGTTGGTGTCAGAGCCGTGGGATTTC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATGTACTCAGGCATCCTaGAAACCCAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPCTQAS*KPRFEI
Trigger: GATTTCAAACCTGGGTTTTCAGGATGCCTGAGTACA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGTGGTGCTCACTGTTTaGCCGCCTGCTCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRVVLTV*PPAQRQ
Trigger: CTGTCTCTGAGCAGGCGGTCAAACAGTGAGCACCAC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTATTACTGCCAACGTaGAGAGAGCGATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLLLPT*RERFVK
Trigger: CTTGACGAATCGCTCTCTGCACGTTGGCAGTAATAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCTCGATGCCTTCAGCGTaGAGCTTGTTTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLASMPSA*SLFSVS
Trigger: GCTCACTGAAAACAAGCTGCACGCTGAAGGCATCGA...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGGAATCGCCATGCGGTaGTGCTTCCGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQGIAMR*CFRSCF
Trigger: GAAGCAGCTTCGGAAGCAGCACCGCATGGCGATTCC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGGATCCTCAGTCCTGTaGCAAGGTTTCACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAGSSVL*QGFTLF
Trigger: AAACAGCGTGAAACCTTGGCACAGGACTGAGGATCC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAAGAAATGGAACAGGCTaGCCCCTACTCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRRNGTG*PLLLPA
Trigger: GGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCT...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAATTCCAAGTCAATACTaGAGCGCGACGATCCACACA +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAIPSQY*SATIHT
Trigger: TGTGTGGATCGTCGCGCTGCAGTATTGACTTGGAAT...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTAGCTGGAGCTGACTaGATTTCCTTCCATAGTGAA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLAGAD*ISFHSE
Trigger: TTCACTATGGAAGGAAATGCAGTCAGCTCCAGCTAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTAGGTCATCCAGGGAATaGGATCGGGGCCAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSRSSRE*DRGQVS
Trigger: GGACACTTGGCCCCGATCCCATTCCCTGGATGACCT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCGGGGCTGGGCCTTCGTaGAAGAGGCGGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTGAGPS*KRRSSS
Trigger: AGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCC...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGAGCATCATAGTTTCTaGGCAAACACTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAEHHSF*ANTEGV
Trigger: CACCCCCTCAGTGTTTGCCCAGAAACTATGATGCTC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTTTCACACCGTGCTCCTaGAGGCTTGTGTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSFTPCS*RLVFSG
Trigger: CCCCGAGAACACAAGCCTCCAGGAGCACGGTGTGAA...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCGTGAGTCCACCACTTaGAATCGCCATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSRESTT*NRHAVL
Trigger: CAGCACCGCATGGCGATTCCAAGTGGTGGACTCACG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGCGTGAGTCCACCACTTaGAATCGCCATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQRESTT*NRHAVL
Trigger: CAGCACCGCATGGCGATTCCAAGTGGTGGACTCACG...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACTGAGGACTGAATTTTaGGATGGACATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLRTEF*DGHGQD
Trigger: ATCCTGACCATGTCCATCCCAAAATTCAGTCCTCAG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCCCCATCTTCCGACTTaGCGCTTTCCCGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTPHLPT*RFPGCW
Trigger: CCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCATAGGGACTGGGGGTaGAGTCGGTGTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHHRDWG*SRCAPW
Trigger: CCAGGGTGCACACCGACTTCACCCCCAGTCCCTATG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAAATACGGCTCCTCCGTaGGATCGATGCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRNTAPP*DRCLQR
Trigger: ACGCTGAAGGCATCGATCTCACGGAGGAGCCGTATT...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAATACGGCTCCTCCGTaGGATCGATGCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQNTAPP*DRCLQR
Trigger: ACGCTGAAGGCATCGATCTCACGGAGGAGCCGTATT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCCGTTAACTGAGGACTaGATTTTGGGATGGACATGG +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSPLTED*ILGWTW
Trigger: CCATGTCCATCCCAAAATTCAGTCCTCAGTTAACGG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATTTGCAGGACATCTCTaGATCACAAATACGTGGACA +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPFAGHL*ITNTWT
Trigger: TGTCCACGTATTTGTGATTCAGAGATGTCCTGCAAA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACTTGAGCCTAGCAAGTaGTTCCTCAATTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLEPSK*FLNCDH
Trigger: ATGATCACAATTGAGGAAGCACTTGCTAGGCTCAAG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATTTCCAGGTTCTCACTaGTTTCGTAGCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAFPGSH*FRSILS
Trigger: ACTCAGGATGCTACGAAAGCAGTGAGAACCTGGAAA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGCACTTGGAATCGCCATaGGGTGCTGCTTCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQHLESP*GAASEA
Trigger: AGCTTCGGAAGCAGCACCGCATGGCGATTCCAAGTG...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCTGCATCAGCATCATATaGACAGTGAAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLACISII*TVKGWL
Trigger: GAGCCACCCTTTCACTGTGCATATGATGCTGATGCA...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCTCACAGTGACCTTTTaGAAACATGATCCGTTAACT +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRLTVTF*KHDPLT
Trigger: AGTTAACGGATCATGTTTGCAAAAGGTCACTGTGAG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCTCATTATTCCTTTCTaGTTCTTTCGGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRLIIPF*FFRKFC
Trigger: GCAGAACTTCCGAAAGAACCAGAAAGGAATAATGAG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGCGCTTTCCCGGTTGCTaGTTGAGGAATCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQRFPGC*LRNQWC
Trigger: GCACCACTGATTCCTCAACCAGCAACCGGGAAAGCG...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCTCCGACGCCTCCTGGTaGGGCGTTTGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTSDASW*GVWVSP
Trigger: AGGAGAAACCCAAACGCCCCACCAGGAGGCGTCGGA...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGACTTGGGCTGGGGTaGTCGTCCTTTCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRLGLG*SSFPTP
Trigger: AGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGCACAGCTCCGGCAGATaGAAACTGGGAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQHSSGR*KLGGFF
Trigger: GAAGAAGCCTCCCAGTTTCCATCTGCCGGAGCTGTG...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCCCATGGGAACAGGGTaGAGTCCGTTAGCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYPMGTG*SPLARR
Trigger: ACGCCTTGCTAACGGACTCCACCCTGTTCCCATGGG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGACAGAGAAGGCACTTaGCTCAGTGTGCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQDREGT*LSVLKP
Trigger: GGGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GAGTCATCTTCGGGAGGTTTCTCAGGAGAGCCATCAAAGAAAAGGGGCTTCTTGAGGATGGAGACGTGGTaGGAGAGTCTGAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: ESSSGGFSGEPSKKRGFLRMETW*ESLSHL
Trigger: AAGATGACTCAGACTCTCTCACCACGTCTCCATCCT...CAAGAAGCCCCTTTTCTTTGATGGCTCTCCTGAGAAACCTCCCGAAGATGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR TCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCACATCGTCTCTTTCACTaGTTTCACCTTTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAHRLFH*FHLFPK
Trigger: CTTGGGAAAAAGGTGAAATCAGTGAAAGAGACGATG...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACCAGAGGCTGCGATTaGGCCCTCCAGTTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQTRGCD*ALQFLS
Trigger: ACTAAGAAACTGGAGGGCTCAATCGCAGCCTCTGGT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGCAGACCGATGGAAATaGGCCAATCTGACACAGACG +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQADRWK*ANLTQT
Trigger: CGTCTGTGTCAGATTGGCTCATTTCCATCGGTCTGC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCTGCACGTCCAGAGATaGTGGAGGAATTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSLHVQR*WRNCIS
Trigger: GCTGATGCAATTCCTCCATCATCTCTGGACGTGCAG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAAGATGTTCTAACTTTTaGACAAATGAGCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPRCSNF*TNERGQ
Trigger: CTGACCACGCTCATTTGTTCAAAAGTTAGAACATCT...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGATGTCTGCCTAAGCTaGAGATGTGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLADVCLS*RCGSMV
Trigger: AACCATACTTCCACATCTTCAGCTTAGGCAGACATC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTATGCAGCCTCACAGTaGCCTTTTGCAAACATGATC +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSYAASQ*PFANMI
Trigger: GATCATGTTTGCAAAAGGTCACTGTGAGGCTGCATA...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTAAGGACATCTTTCTaGAATATGCAGCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLRTSF*NMQPHS
Trigger: ACTGTGAGGCTGCATATTTCAGAAAGATGTCCTTAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGCAGGAGAATCACTTaGACCTGGGAGACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGRRIT*TWETEV
Trigger: AACCTCAGTCTCCCAGGTTCAAGTGATTCTCCTGCC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACAAGTTAATTCATGGTaGCCCTTTTCTCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPQVNSW*PFSLSE
Trigger: TTCACTGAGAGAAAAGGGTCACCATGAATTAACTTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCCCAGCTTCACACCGTaGTCCTGGAGGCTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTPSFTP*SWRLVF
Trigger: GAACACAAGCCTCCAGGAGCACGGTGTGAAGCTGGG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCATCGCCATGCGGTGCTaGTTCCGAAGCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTIAMRC*FRSCFT
Trigger: GGTGAAGCAGCTTCGGAAGCAGCACCGCATGGCGAT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCTGACACAGACGAAATaGACCCAGGAGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYLTQTK*TQERRA
Trigger: AGCCCGTCTCTCCTGGGTGCATTTCGTCTGTGTCAG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCTCACAGTGACCTTTTaGAAACATGATCCGTTAACT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLTVTF*KHDPLT
Trigger: AGTTAACGGATCATGTTTGCAAAAGGTCACTGTGAG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTCCTGGTGGGGCGTTTaGGTTTCTCCTCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYSWWGV*VSPRLH
Trigger: GTGAAGACGAGGAGAAACCCAAACGCCCCACCAGGA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCTTTCCGACGCCTCCTaGTGGGGCGTTTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTLSDAS*WGVWVS
Trigger: AGAAACCCAAACGCCCCACCAGGAGGCGTCGGAAAG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACAGACTTGGGCTGGGGTaGTCGTCCTTTCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHRLGLG*SSFPTP
Trigger: AGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGTGGGTCACAGCTCTTaGACGTGTCTGGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHVGHSS*TCLGQG
Trigger: GCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCAC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGAAAATCTCTTGCTTTaGGTCAGTAGCAATGCATTG +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPENLLL*VSSNAL
Trigger: CAATGCATTGCTACTGACCCAAAGCAAGAGATTTTC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGAAGATGTGGAAGTATaGTTACAGGGTTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAEDVEV*LQGCGH
Trigger: GTGTCCACAACCCTGTAACCATACTTCCACATCTTC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAAAAGCTCACTTTTGCTaGAAACATCCCAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAKAHFC*KHPREV
Trigger: AACCTCTCTGGGATGTTTCCAGCAAAAGTGAGCTTT...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCAATACACAGCTTTCTTaGGCTGAAGCAATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVNTQLS*AEAIAR
Trigger: TCTTGCAATTGCTTCAGCCCAAGAAAGCTGTGTATT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATCGATGTTTCCCAGTaGACCGTCCAGGATACCCAT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQIDVSQ*TVQDTH
Trigger: ATGGGTATCCTGGACGGTTCACTGGGAAACATCGAT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTACCATCATCATTAGCTaGATCCGCTCCTCATCGCTC +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSTIIIS*IRSSSL
Trigger: GAGCGATGAGGAGCGGATTCAGCTAATGATGATGGT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCATCGTCTCTTTCACTaGTTTCACCTTTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAHRLFH*FHLFPK
Trigger: CTTGGGAAAAAGGTGAAATCAGTGAAAGAGACGATG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAACAGGTGGAGGCTGTaGTGGAATTTTGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQNRWRL*WNFGLH
Trigger: ATGCAGCCCAAAATTCCATCACAGCCTCCACCTGTT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTTCGGCAGATTTCCGTaGGTCCACCACTTGGAATCG +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYFGRFP*VHHLES
Trigger: CGATTCCAAGTGGTGGACTCACGGAAATCTGCCGAA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTCTATGCAAAGGCATTaGTTTCCAAAGAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVSMQRH*FPKKCD
Trigger: ATCACACTTCTTTGGAAATCAATGCCTTTGCATAGA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCACCCTTTTCTCTCAGTaGATGAAGATGCCACATTTG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLATLFSQ*MKMPHL
Trigger: CAAATGTGGCATCTTCATTCACTGAGAGAAAAGGGT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTTCGATGCCTTCAGCGTaGAGCTTGTTTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSSMPSA*SLFSVS
Trigger: GCTCACTGAAAACAAGCTGCACGCTGAAGGCATCGA...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTCCTCTGCGTATCTCTaGACCAGGGCTTCAGGAATC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYSSAYL*TRASGI
Trigger: GATTCCTGAAGCCCTGGTGCAGAGATACGCAGAGGA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTGCTGCTTCCGAAGCTaGTTCACCCGGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHCCFRS*FTRIWS
Trigger: GGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGATCCTCAGTCCTGTaGCAAGGTTTCACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGSSVL*QGFTLF
Trigger: AAACAGCGTGAAACCTTGGCACAGGACTGAGGATCC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCAGAAAAGCTCACTTTTaGTGGAAACATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLARKAHF*WKHPRE
Trigger: CTCTCTGGGATGTTTCCAGCAAAAGTGAGCTTTTCT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCATCCTTTTAGGTGGTTaGAAACTTCACGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAILLGG*KLHGTA
Trigger: AGCAGTTCCGTGAAGTTTGCAACCACCTAAAAGGAT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCATCATCGTTATTTCACTaGCAACATAACCAACGTCTT +
Preference number: 4 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPSSLFH*QHNQRL
Trigger: AAGACGTTGGTTATGTTGCCAGTGAAATAACGATGA...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCAGGCTGCTGGAGGATaGAGACGTGGTGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHQAAGG*RRGERV
Trigger: GACTCTCTCACCACGTCTCCATCCTCCAGCAGCCTG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCTCCTGGTGGGGCGTTTaGGTTTCTCCTCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTSWWGV*VSPRLH
Trigger: GTGAAGACGAGGAGAAACCCAAACGCCCCACCAGGA...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTCCACAGACTTGGGCTaGGGTGGTCGTCCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHSTDLG*GGRPFR
Trigger: TCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGATCCTCCACAGACTTaGGCTGGGGTGGTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHDPPQT*AGVVVL
Trigger: AAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATCCTGGGATCCTGACTaGTCGCTGTTACTGTCATAC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRSWDPD*SLLLSY
Trigger: GTATGACAGTAACAGCGACCAGTCAGGATCCCAGGA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACCGGCAGATGGAAACTaGGAGGCTTCTTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRPADGN*EASSVF
Trigger: AAAAACCGAAGAAGCCTCCCAGTTTCCATCTGCCGG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCACAGCTCCGGCAGATaGAAACTGGGAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTHSSGR*KLGGFF
Trigger: GAAGAAGCCTCCCAGTTTCCATCTGCCGGAGCTGTG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGAAAATCTCTTGCTTTaGGTCAGTAGCAATGCATTG +
Preference number: 4 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAENLLL*VSSNAL
Trigger: CAATGCATTGCTACTGACCCAAAGCAAGAGATTTTC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGTTCTCTGCTCTTTTTaGCAGGAACAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRVLCSF*QEQVEA
Trigger: AGCCTCCACCTGTTCCTGCCAAAAAGAGCAGAGAAC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTTCACACCGTGCTCCTaGAGGCTTGTGTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHFTPCS*RLVFSG
Trigger: CCCCGAGAACACAAGCCTCCAGGAGCACGGTGTGAA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCGCCAGGCCTTTCTTCTaGATCTGGTCTGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTARPFF*IWSARP
Trigger: TGGACGTGCAGACCAGATCCAGAAGAAAGGCCTGGC...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGGTTTCACGCTGTTTaGCCACACGCCAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRFHAV*PHARPF
Trigger: GAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCAAAGCTCACTTTTGCTaGAAACATCCCAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSKAHFC*KHPREV
Trigger: AACCTCTCTGGGATGTTTCCAGCAAAAGTGAGCTTT...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGGATGGAGACGTGGTaGGAGAGTCTGAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYRMETW*ESLSHL
Trigger: AAGATGACTCAGACTCTCTCACCACGTCTCCATCCT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCAGCTTGTTTTCAGTaGGCGTTTCTAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRAACFQ*AFLDPL
Trigger: GAGTGGATCTAGAAACGCTCACTGAAAACAAGCTGC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGGAAATGAGCCAATCTaGCACAGACGAAATGCACCC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYGNEPI*HRRNAP
Trigger: GGGTGCATTTCGTCTGTGTCAGATTGGCTCATTTCC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACAAAAGCAGTCACTATaGATACAGACACACACGCGC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRQKQSL*IQTHTR
Trigger: GCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACCGTTAACTGAGGACTaGATTTTGGGATGGACATGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRPLTED*ILGWTW
Trigger: CCATGTCCATCCCAAAATTCAGTCCTCAGTTAACGG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGTTCAGAAAATCTCTTaGTTTGGGTCAGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAVQKIS*FGSVAM
Trigger: CATTGCTACTGACCCAAAGCAAGAGATTTTCTGAAC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCTGATCCAAGTCCTCTaGGTATCTCTGCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHLIQVL*VSLHQG
Trigger: GCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCTTCTGGATCTGGTCTaGACGTCCAGAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYLLDLV*TSRDDG
Trigger: TCCATCATCTCTGGACGTGCAGACCAGATCCAGAAG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTATTCCAAGTCAATACTaGAGCGCGACGATCCACACA +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSIPSQY*SATIHT
Trigger: TGTGTGGATCGTCGCGCTGCAGTATTGACTTGGAAT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACAGGCCACTGGAACTCTaGCTACCCCAGAGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHRPLEL*LPQRSR
Trigger: TCTAGACCTCTGGGGTAGGCAGAGTTCCAGTGGCCT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCACTGTTTGACCGCCTaGTCAGAGACAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHHCLTA*SETELL
Trigger: CAGCAGCTCTGTCTCTGAGCAGGCGGTCAAACAGTG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCTCCTTCTTTACCCATTaGGTCAGAATTATTACTGCC +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLASFFTH*VRIITA
Trigger: GGCAGTAATAATTCTGACCCAATGGGTAAAGAAGGA...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTGGTTGAGGAATCAGTaGTGCTCACTGTTTGACCGC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYWLRNQ*CSLFDR
Trigger: GCGGTCAAACAGTGAGCACCACTGATTCCTCAACCA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGACAGAGAAGGCACTTaGCTCAGTGTGCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHDREGT*LSVLKP
Trigger: GGGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACAGGTTTCACGCTGTTTaGCCACACGCCAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHRFHAV*PHARPF
Trigger: GAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCGAGAGGCAGTAGGTaGTTTGATGACTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRARGSR*FDDFFV
Trigger: TACAAAGAAGTCATCAAATCACCTACTGCCTCTCGC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAACAGGTGGAGGCTGTaGTGGAATTTTGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTNRWRL*WNFGLH
Trigger: ATGCAGCCCAAAATTCCATCACAGCCTCCACCTGTT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGATGTCTGCCTAAGCTaGAGATGTGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSDVCLS*RCGSMV
Trigger: AACCATACTTCCACATCTTCAGCTTAGGCAGACATC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTATCCACCACAGCACGTaGAATGCATTGAACGCTTTA +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSIHHST*NALNAL
Trigger: TAAAGCGTTCAATGCATTTCACGTGCTGTGGTGGAT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTCAAGCTGGGCTCGGTaGATGACTTGGCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHSSWAR*MTWQIG
Trigger: TCCTATCTGCCAAGTCATCCACCGAGCCCAGCTTGA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGAAGATGTGGAAGTATaGTTACAGGGTTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSREDVEV*LQGCGH
Trigger: GTGTCCACAACCCTGTAACCATACTTCCACATCTTC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCTGAGGACTGAATTTTaGGATGGACATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSLRTEF*DGHGQD
Trigger: ATCCTGACCATGTCCATCCCAAAATTCAGTCCTCAG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTTTCTTGAGCTTGAGTaGGTCTGTGTCATAGGGACT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYFLELE*VCVIGT
Trigger: AGTCCCTATGACACAGACTCACTCAAGCTCAAGAAA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCGCAGCTTGTTTTCAGTaGGCGTTTCTAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTAACFQ*AFLDPL
Trigger: GAGTGGATCTAGAAACGCTCACTGAAAACAAGCTGC...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGAAATGAGCCAATCTaGCACAGACGAAATGCACCC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGNEPI*HRRNAP
Trigger: GGGTGCATTTCGTCTGTGTCAGATTGGCTCATTTCC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCACACATGGCAGCAGTaGCTTGGCAAGTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHHTWQQ*LGKLTF
Trigger: AAAGGTCAACTTGCCAAGTCACTGCTGCCATGTGTG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAACAGCTTTCTTGGGCTaGAGCAATTGCAAGAACATA +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRTAFLG*SNCKNI
Trigger: TATGTTCTTGCAATTGCTTCAGCCCAAGAAAGCTGT...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTAAACGGTTGATTCAGTaGCTGTGTTTGACCACACTT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSKRLIQ*LCLTTL
Trigger: AAGTGTGGTCAAACACAGTCACTGAATCAACCGTTT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCATTGTTCTCTTGAATTaGAGTTTGATGAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAIVLLN*SLMSHQ
Trigger: TTGATGGCTCATCAAACTGCAATTCAAGAGAACAAT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTTATTACTGCCAACGTaGAGAGAGCGATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYLLLPT*RERFVK
Trigger: CTTGACGAATCGCTCTCTGCACGTTGGCAGTAATAA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGATGGAATTTTGGGCTaGATTCTCTGCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYDGILG*ILCSAS
Trigger: AGATGCTGAGCAGAGAATGCAGCCCAAAATTCCATC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGCAAATCCTCCAAAACTaGAGGTTCTCTGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQQILQN*RFSVEK
Trigger: CTTTTCCACAGAGAACCTGCAGTTTTGGAGGATTTG...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCCTTTCTTCTGGATCTaGTCTGCACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHPFFWI*SARPEM
Trigger: CATCTCTGGACGTGCAGACCAGATCCAGAAGAAAGG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCACAACTTCTTCACATaGCATCTTATAGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: TDRRARALSEMEQAAPYSHNFFT*HLIEDE
Trigger: TTCATCTTCTATAAGATGCCATGTGAAGAAGTTGTG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
3UTR CAA 72 bp AGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTaGTGTAACCTCTTAAACTTCACCGACTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SFFLTLRVEFTS*CNLLNFTDSSV
Trigger: GACTGAGGAGTCGGTGAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR TCA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTAATCTTCATATCCATTaGACAGGAAAGTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSNLHIH*TGKWAC
Trigger: ACATGCCCACTTTCCTGTTCAATGGATATGAAGATT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATTAAGGACATCTTTCTaGAATATGCAGCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRLRTSF*NMQPHS
Trigger: ACTGTGAGGCTGCATATTTCAGAAAGATGTCCTTAA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATACAGCTTTCTTGGGCTaGAGCAATTGCAAGAACATA +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYTAFLG*SNCKNI
Trigger: TATGTTCTTGCAATTGCTTCAGCCCAAGAAAGCTGT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAAGAAAAACCCTCCATaGGTCCAGTGCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTKKNPP*VQCCEI
Trigger: AATCTCACAGCACTGGACTCATGGAGGGTTTTTCTT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGTGTTGTAATAATCTaGATACTGCTGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGVVII*ILLRQV
Trigger: GACCTGGCGCAGCAGTATGCAGATTATTACAACACC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGTTCAGAAAATCTCTTaGTTTGGGTCAGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRVQKIS*FGSVAM
Trigger: CATTGCTACTGACCCAAAGCAAGAGATTTTCTGAAC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGAAAAGCTCACTTTTaGTGGAAACATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYRKAHF*WKHPRE
Trigger: CTCTCTGGGATGTTTCCAGCAAAAGTGAGCTTTTCT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGCCTTTTCTTCTTCTaGGTAGGAGAAGAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGLFFF*VGEECP
Trigger: GGGACATTCTTCTCCTACCCAGAAGAAGAAAAGGCC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATCCTTCTTTACCCATTaGGTCAGAATTATTACTGCC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRSFFTH*VRIITA
Trigger: GGCAGTAATAATTCTGACCCAATGGGTAAAGAAGGA...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATTTTGGGATGGACATaGTCAGGATTCCAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQILGWT*SGFQVN
Trigger: ATTGACTTGGAATCCTGACCATGTCCATCCCAAAAT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGATGTTCTAACTTTTaGACAAATGAGCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYRCSNF*TNERGQ
Trigger: CTGACCACGCTCATTTGTTCAAAAGTTAGAACATCT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGTCAGAATTATTACTaGCAACGTGCAGAGAGCGAT +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGQNYY*QRAESD
Trigger: ATCGCTCTCTGCACGTTGGCAGTAATAATTCTGACC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGATGGAATTTTGGGCTaGATTCTCTGCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHDGILG*ILCSAS
Trigger: AGATGCTGAGCAGAGAATGCAGCCCAAAATTCCATC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGAAAAACTTCAGTTATaGTTAAGCCAGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHEKLQL*LSQPAV
Trigger: CACTGCCGGCTGGCTTAAGCATAACTGAAGTTTTTC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAGCCAGTTGGCATCTTaGTTCTTTTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYSQLAS*FFCLLK
Trigger: TTTCAGAAGACAAAAGAACCAAGATGCCAACTGGCT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATAATACACAGCTTTCTTaGGCTGAAGCAATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYNTQLS*AEAIAR
Trigger: TCTTGCAATTGCTTCAGCCCAAGAAAGCTGTGTATT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAACGTCTTCTCCTTTTaGAGTCTGTCTCATTATTCC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTNVFSF*SLSHYS
Trigger: GGAATAATGAGACAGACTTCAAAAGGAGAAGACGTT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAATCTTCATATCCATTaGACAGGAAAGTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTNLHIH*TGKWAC
Trigger: ACATGCCCACTTTCCTGTTCAATGGATATGAAGATT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR TCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCGACTTTCACTGAAATaGAAATCCTTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRLSLK*KSFMEN
Trigger: GTTCTCCATGAAGGATTTTCATTTCAGTGAAAGTCG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR TCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATACTAAGGCAAGGCCATaGAACAATATCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYTKARP*NNILVI
Trigger: GATAACTAAGATATTGTTTCATGGCCTTGCCTTAGT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGCCAGTTGGCATCTTaGTTCTTTTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTSQLAS*FFCLLK
Trigger: TTTCAGAAGACAAAAGAACCAAGATGCCAACTGGCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGTAACGATACTAAACTaGTTAAAACCAAAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRVTILN*LKPKAV
Trigger: GACTGCTTTTGGTTTTAACCAGTTTAGTATCGTTAC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGTAACGATACTAAACTaGTTAAAACCAAAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MEELHQHHMHSERVALVQVTILN*LKPKAV
Trigger: GACTGCTTTTGGTTTTAACCAGTTTAGTATCGTTAC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCATTTTGGGATGGACATaGTCAGGATTCCAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTILGWT*SGFQVN
Trigger: ATTGACTTGGAATCCTGACCATGTCCATCCCAAAAT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACAAATACTTAACACATaGCTAATGAGATTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRQILNT*LMRFVW
Trigger: CCAGACAAATCTCATTAGCCATGTGTTAAGTATTTG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CCA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGATAAAAATGTGGTTTaGCATTCTCAAAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: WRNCISIICTVKGWLLSRDKNVV*HSQKLQ
Trigger: CTGGAGTTTTTGAGAATGCCAAACCACATTTTTATC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR GCA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCAAACTTCACGGAACTaGTTATATCTTAGTGATTTC +
Preference number: 4 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYQTSRN*LYLSDF
Trigger: GAAATCACTAAGATATAAGCAGTTCCGTGAAGTTTG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR TCA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACACTAAGGCAAGGCCATaGAACAATATCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHTKARP*NNILVI
Trigger: GATAACTAAGATATTGTTTCATGGCCTTGCCTTAGT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR GCA 90 bp TCTTCCACCCTAATTAGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTTGATTGTTCTCTTGAATTaGAGTTTGATGAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: SSTLISFFLTLRVEFTSLIVLLN*SLMSHQ
Trigger: TTGATGGCTCATCAAACTGCAATTCAAGAGAACAAT...CAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACTAATTAGGGTGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS GCA 90 bp GGGAAGCCGCAGCTCCCGCCCCCTTTGCCTTTCTGCCGGAGCAGCTaGAGGTCACAGGTGGTGCTGGTGACGCCTTTTCTGGAGGGACGC +
Preference number: 5 (lower is better)
Translates to: GKPQLPPPLPFCRSS*RSQVVLVTPFLEGR
Trigger: GCGTCCCTCCAGAAAAGGCGTCACCAGCACCACCTGTGACCTGCAGCTGCTCCGGCAGAAAGGCAAAGGGGGCGGGAGCTGCGGCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS TCA 90 bp CCCGGCCTTGAGCTTGGGCTTGTCCAAGTGTTCGGGGTCGGGCTGTaGAGGCGGAGGGGAGCCAGGCATTCCATCAAGGCCCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PGLELGLVQVFGVGL*RRRGARHSIKARVL
Trigger: CAGGACTCGGGCCTTGATGGAATGCCTGGCTCCCCTCCGCCTTCACAGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS GCA 90 bp GCACAGGAGACCTTCCTGGTCAAAGCCGGGCCCAGCTTCACACCGTaGTCCTGGAGGCTTGTGTTCTCGGGGAGCTCTGAGAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: AQETFLVKAGPSFTP*SWRLVFSGSSESQG
Trigger: CCCCTGGCTCTCAGAGCTCCCCGAGAACACAAGCCTCCAGGAGCACGGTGTGAAGCTGGGCCCGGCTTTGACCAGGAAGGTCTCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp CATCCTCCTCCAGCAGGCACCGCCTCAGGTCCTGTCTCTCAGCCTTaGTCAGGGTCCTGTCTGAGGCAGGCCGCACTAGCTGGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: HPPPAGTASGPVSQP*SGSCLRQAALAGSG
Trigger: ACCTGACCCAGCTAGTGCGGCCTGCCTCAGACAGGACCCTGAGCAAGGCTGAGAGACAGGACCTGAGGCGGTGCCTGCTGGAGGAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGGGGCGGCCTTGTGCTaGGTGGGCTGCCAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPGAALC*VGCQAP
Trigger: AGGCGCCTGGCAGCCCACCAAGCACAAGGCCGCCCC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp GTCCATGTTGGCGGCGACGTCCCGCTCGGGCTGATCCAAGTCCTCTaGGTATCTCTGCACCAGGGCTTCAGGAATCCCACAGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: VHVGGDVPLGLIQVL*VSLHQGFRNPTAAM
Trigger: CATGGCCGCTGTGGGATTCCTGAAGCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCCAACATGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp GTGAGTCCACCACTTGGAATCGCCATGCGGTGCTGCTTCCGAAGCTaGTTCACCCGGATCTGGTCCATGTTGGCGGCGACGTCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: VSPPLGIAMRCCFRS*FTRIWSMLAATSRS
Trigger: CGAGCGGGACGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCACCGCATGGCGATTCCAAGTGGTGGACTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TGCGGTGCTGCTTCCGAAGCTGCTTCACCCGGATCTGGTCCATGTTaGCGGCGACGTCCCGCTCGGGCTGATCCAAGTCCTCTGCGTATC +
Preference number: 5 (lower is better)
Translates to: CGAASEAASPGSGPC*RRRPARADPSPLRI
Trigger: GATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCACCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCGGATCTGGTCCATGTaGGCGGCGACGTCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRRIWSM*AATSRS
Trigger: CGAGCGGGACGTCGCCGCCAACATGGACCAGATCCG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp CCTGAAGGCAAGTGTGAGACAGAGAAGGCACTTGGCTCAGTGTGCTaGAGCCCGCGGTGGAGAGGGTGCCGGCGTACATGGGCAGACCGA +
Preference number: 5 (lower is better)
Translates to: PEGKCETEKALGSVC*SPRWRGCRRTWADR
Trigger: TCGGTCTGCCCATGTACGCCGGCACCCTCTCCACCGCGGGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTCTCACACTTGCCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp TTCACCCGGATCTGGTCCATGTTGGCGGCGACGTCCCGCTCGGGCTaGTCCAAGTCCTCTGCGTATCTCTGCACCAGGGCTTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: FTRIWSMLAATSRSG*SKSSAYLCTRASGI
Trigger: GATTCCTGAAGCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCCAACATGGACCAGATCCGGGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp AACCCTTTTAGTACAGCGGTCGACCGTGGCGGCCCACTTCCTCTTTaGCTCCTCATCCTCCTCCAGCAGGCACCGCCTCAGGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: NPFSTAVDRGGPLPL*LLILLQQAPPQVLS
Trigger: AGACAGGACCTGAGGCGGTGCCTGCTGGAGGAGGATGAGGAGGCAAAGAGGAAGTGGGCCGCCACGGTCGACCGCTGTACTAAAAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS GCA 90 bp GAACCATCTGGCCAGTCAGCAGGGTCCAGGGCAGCCGACTGCCGGTaGTGGGCCTCGTATTCCTTGAGCCTAGCAAGTGCTTCCTCAATT +
Preference number: 5 (lower is better)
Translates to: EPSGQSAGSRAADCR*WASYSLSLASASSI
Trigger: AATTGAGGAAGCACTTGCTAGGCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGACCCTGCTGACTGGCCAGATGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCGTGCTCCTGGAGGCTaGTGTTCTCGGGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRAPGG*CSRGAL
Trigger: CAGAGCTCCCCGAGAACACAAGCCTCCAGGAGCACG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCGGATCTGGTCCATGTaGGCGGCGACGTCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TDRRARALSEMEQAAPYSRIWSM*AATSRS
Trigger: CGAGCGGGACGTCGCCGCCAACATGGACCAGATCCG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp GCTACAGAAGCCAAGCGACTCTTCGATCTGGGACCGCAGCTGAAGTaGCGTGGGGCTAGCATCGGGTTTCTCCACTTCCAGGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ATEAKRLFDLGPQLK*RGASIGFLHFQVLG
Trigger: TCCCAGGACCTGGAAGTGGAGAAACCCGATGCTAGCCCCACGTCACTTCAGCTGCGGTCCCAGATCGAAGAGTCGCTTGGCTTCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000367469.5
CDS TCA 90 bp TCTGTCACCTCGGTAGGCACGTCTTGCTCAGCACCAGGCTCCACTTaGAGGTCATCCAGGGAATGGGATCGGGGCCAAGTGTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: SVTSVGTSCSAPGST*RSSREWDRGQVSTV
Trigger: GACTGTGGACACTTGGCCCCGATCCCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAGGTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AAAGGGGCTTCTTGTGCACGCCAGAGTAGAGGGCGGACCGTTCATCCAGGACCGCCTTTGCTGAAGGTTTaGACCAACTTCCGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KGASCARQSRGRTVHPGPPLLKV*TNFRPA
Trigger: GGCTGGCCGGAAGTTGGTCAAAACCTTCAGCAAAGG...CGGTCCTGGATGAACGGTCCGCCCTCTACTCTGGCGTGCACAAGAAGCCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCACAGAACCCCCGGCCTaGAGCTTGGGCTTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVTEPPA*SLGLSK
Trigger: CTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS TCA 90 bp GAGGGTGCCGGCGTACATGGGCAGACCGATGGAAATGAGCCAATCTaGCACAGACGAAATGCACCCAGGAGAGACGGGCTTTCGGCAGAT +
Preference number: 5 (lower is better)
Translates to: EGAGVHGQTDGNEPI*HRRNAPRRDGLSAD
Trigger: ATCTGCCGAAAGCCCGTCTCTCCTGGGTGCATTTCGTCTGTGTCAGATTGGCTCATTTCCATCGGTCTGCCCATGTACGCCGGCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp CCCATTCCGGGCCTGGCTACATGGCCTCAGGGCCTGGCGGCAGTTTaGAGAGTCTGGCTGCAGATAGGAGCTTTCTTATGTGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: PIPGLATWPQGLAAV*RVWLQIGAFLCVSP
Trigger: AGGAGAGACACATAAGAAAGCTCCTATCTGCAGCCAGACTCTTCAAACTGCCGCCAGGCCCTGAGGCCATGTAGCCAGGCCCGGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TCTTTTAGGTTAATCCGATCCAGGAGATCCTCCACAGACTTGGGCTaGGGTGGTCGTCCTTTCCGACGCCTCCTGGTGGGGCGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SFRLIRSRRSSTDLG*GGRPFRRLLVGRLG
Trigger: ACCCAAACGCCCCACCAGGAGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCTCCTGGATCGGATTAACCTAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp GTCAGTAGCAATGCATTGTCGACAGCAGAGTCTTGCTCCAGGGGCTaGGCCTTCGTGGAAGAGGCGGTCGTCTTCTGTGGCACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: VSSNALSTAESCSRG*AFVEEAVVFCGTSG
Trigger: ACCTGAAGTGCCACAGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCCTGGAGCAAGACTCTGCTGTCGACAATGCATTGCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp GACTCTCCCTCCGATGCTGGCCCTGTAATTCCAGTTTCACTGCTGTaGTTTGGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: DSPSDAGPVIPVSLL*FGPGSHLSGPSGLA
Trigger: AGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGAGGGAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTCCCCATCTTCCGACTaGACGCTTTCCCGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVSPSSD*TLSRLL
Trigger: CAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGGA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCGGCTCGGTGGATGACTaGGCAGATAGGAGGCTAGCT +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVGSVDD*ADRRLA
Trigger: AGCTAGCCTCCTATCTGCCAAGTCATCCACCGAGCC...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCCCAGCAGTCCCCGTTaGCAGGACATCTCTGAATCA +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRPSSPR*QDISES
Trigger: TGATTCAGAGATGTCCTGCAAACGGGGACTGCTGGG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS GCA 90 bp CTCTTGCTTTGGGTCAGTAGCAATGCATTGTCGACAGCAGAGTCTTaGTCCAGGGGCTGGGCCTTCGTGGAAGAGGCGGTCGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLLWVSSNALSTAES*SRGWAFVEEAVVFC
Trigger: ACAGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCCTGGAGCAAGACTCTGCTGTCGACAATGCATTGCTACTGACCCAAAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp TCCTTGTCCTCTCTTAGGAGGACTCCAGCAGGACTCTCCCTCCGATaGTGGCCCTGTAATTCCAGTTTCACTGCTGTGGTTTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLSSLRRTPAGLSLR*WPCNSSFTAVVWAR
Trigger: CCTGGCCCAAACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGAGGGAGAGTCCTGCTGGAGTCCTCCTAAGAGAGGACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CCA 90 bp AGTCTGGGGGCCCTCCAGGGTCTCACAGCTCCGGCAGATGGAAACTaGGAGGCTTCTTCGGTTTTTATTCAAACCAGTCACACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SLGALQGLTAPADGN*EASSVFIQTSHTRW
Trigger: CCACCTGGTGTGACTGGTTTGAATAAAAACCGAAGAAGCCTCCCAGTTTCCATCTGCCGGAGCTGTGAGACCCTGGAGGGCCCCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp ATGCATTGTCGACAGCAGAGTCTTGCTCCAGGGGCTGGGCCTTCGTaGAAGAGGCGGTCGTCTTCTGTGGCACTTCAGGTACAATCTGAG +
Preference number: 5 (lower is better)
Translates to: MHCRQQSLAPGAGPS*KRRSSSVALQVQSE
Trigger: CTCAGATTGTACCTGAAGTGCCACAGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCCTGGAGCAAGACTCTGCTGTCGACAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TTGTCCTCTCTTAGGAGGACTCCAGCAGGACTCTCCCTCCGATGCTaGCCCTGTAATTCCAGTTTCACTGCTGTGGTTTGGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSSLRRTPAGLSLRC*PCNSSFTAVVWARL
Trigger: GAGCCTGGCCCAAACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGAGGGAGAGTCCTGCTGGAGTCCTCCTAAGAGAGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CCA 90 bp GCACGGAAACACACATCCTTGCCCTCAAGGGCAAGTGGGGGCAAGTaGCCTGTGGGGGCATCTGTCTCAACTACTTCCTTGTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ARKHTSLPSRASGGK*PVGASVSTTSLSSL
Trigger: AAGAGAGGACAAGGAAGTAGTTGAGACAGATGCCCCCACAGGCCACTTGCCCCCACTTGCCCTTGAGGGCAAGGATGTGTGTTTCCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACCCCGGCTCTCTCCTTaGCTGAAGGTTTTGACCAAC +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPPRLSP*LKVLTN
Trigger: GTTGGTCAAAACCTTCAGCAAAGGAGAGAGCCGGGG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGCCTTGAGCTTGGGCTaGTCCAAGTGTTCGGGGTCG +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAALSLG*SKCSGS
Trigger: CGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCCGTTCTCTGCTCTTTTaGGCAGGAACAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRSLLF*AGTGGG
Trigger: GCCTCCACCTGTTCCTGCCAAAAAGAGCAGAGAACG...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCAGACAGAGAAGGCACTaGGCTCAGTGTGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVRQRRH*AQCAEA
Trigger: GGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTCT...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp CCTGGGCAGAGGGAGAAAGACTTACTTTCTTTCCACTTCTGGGGTTaGCACGGCGCTACAGAAGCCAAGCGACTCTTCGATCTGGGACCG +
Preference number: 5 (lower is better)
Translates to: PGQREKDLLSFHFWG*HGATEAKRLFDLGP
Trigger: CGGTCCCAGATCGAAGAGTCGCTTGGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAAGAAAGTAAGTCTTTCTCCCTCTGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS GCA 90 bp TCCGGACACTCTGAAACTCCTCCAGGGACACCAGAAGGTGGTGCCTaGGACGGTGGTTGTCATAGAAGCAAACACCATCCGTACTTACCC +
Preference number: 5 (lower is better)
Translates to: SGHSETPPGTPEGGA*DGGCHRSKHHPYLP
Trigger: GGGTAAGTACGGATGGTGTTTGCTTCTATGACAACCACCGTCGCAGGCACCACCTTCTGGTGTCCCTGGAGGAGTTTCAGAGTGTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CCA 90 bp AACTGGGAGGCTTCTTCGGTTTTTATTCAAACCAGTCACACCAGGTaGGTCACAGCTCTTGGACGTGTCTGGGGCAAGGCCACCACCCAG +
Preference number: 5 (lower is better)
Translates to: NWEASSVFIQTSHTR*VTALGRVWGKATTQ
Trigger: CTGGGTGGTGGCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACCTGGTGTGACTGGTTTGAATAAAAACCGAAGAAGCCTCCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TGTCCACAGTCTGGGGGCCCTCCAGGGTCTCACAGCTCCGGCAGATaGAAACTGGGAGGCTTCTTCGGTTTTTATTCAAACCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: CPQSGGPPGSHSSGR*KLGGFFGFYSNQSH
Trigger: GTGTGACTGGTTTGAATAAAAACCGAAGAAGCCTCCCAGTTTCCATCTGCCGGAGCTGTGAGACCCTGGAGGGCCCCCAGACTGTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp GTGCCCAGGGGATGGTGTGTTCCTTCAAACTCGTGTCCTTTTCTGTaGCCCTCCAGAGGCGTCCTTGCTAAACCGTGTTTAGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VPRGWCVPSNSCPFL*PSRGVLAKPCLAPG
Trigger: TCCTGGAGCTAAACACGGTTTAGCAAGGACGCCTCTGGAGGGCCACAGAAAAGGACACGAGTTTGAAGGAACACACCATCCCCTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TCCCTCCGATGCTGGCCCTGTAATTCCAGTTTCACTGCTGTGGTTTaGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTTGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: SLRCWPCNSSFTAVV*ARLSSVWPIRACCL
Trigger: TAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATTTCCACTTCTGGGGTaGACACGGCGCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAFPLLG*TRRYRS
Trigger: GCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAAGTGGTGCTCACTGTTaGACCGCTCATGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSASGAHC*TAHGAL
Trigger: CAGAGCTCCATGAGCGGTCAAACAGTGAGCACCACT...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTTCCCGGTTGCTGGTaGAGGAATCAGTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVFPGCW*RNQWCS
Trigger: TGAGCACCACTGATTCCTCAACCAGCAACCGGGAAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTGACGCTTTCCCGGTaGCTGGTTGAGGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLTLSR*LVEESV
Trigger: CACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GCCAAGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTTGAACGTGCCGACTTaGTTGTTCAGCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: AKVSRCLATRQAFLLDLVLNVPT*LFSRPI
Trigger: GATGGGCCTGCTGAACAACAAAGTCGGCACGTTCAA...GACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGTCAGTAGCAATGCATaGTCGACAGCAGAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRVSSNA*STAESC
Trigger: GCAAGACTCTGCTGTCGACAATGCATTGCTACTGAC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCGCATCTACCCCTTCTTaGGTGCCCAGGGGATGGTGT +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAASTPS*VPRGWC
Trigger: ACACCATCCCCTGGGCACCAAAGAAGGGGTAGATGC...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGGCTGTGATGGAATTTaGGGCTGCATTCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRGCDGI*GCILCS
Trigger: TGAGCAGAGAATGCAGCCCAAAATTCCATCACAGCC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACGGGGCGGCCTTGTGCTaGGTGGGCTGCCAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHGAALC*VGCQAP
Trigger: AGGCGCCTGGCAGCCCACCAAGCACAAGGCCGCCCC...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGTGCTTGTCTTGTCTTaGGGGGTCAAAGAGAACCGC +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPVLVLS*GVKENR
Trigger: GCGGTTCTCTTTGACCCCCAAAGACAAGACAAGCAC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp TTCGTCATCCCCATCTTCCGACTTGACGCTTTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCACTGTTTGACCGCTCATGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FVIPIFRLDAFPVAG*GISGAHCLTAHGAL
Trigger: CAGAGCTCCATGAGCGGTCAAACAGTGAGCACCACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGGATGACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS TCA 90 bp TTCGTCATCCCCATCTTCCGACTTGACGCTTTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCACTGTTTGACCGCCTGCTCAGAGACA +
Preference number: 5 (lower is better)
Translates to: FVIPIFRLDAFPVAG*GISGAHCLTACSET
Trigger: TGTCTCTGAGCAGGCGGTCAAACAGTGAGCACCACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGGATGACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCCTTTGCTGAAGGTTTaGACCAACTTCCGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLAPLLKV*TNFRPA
Trigger: GGCTGGCCGGAAGTTGGTCAAAACCTTCAGCAAAGG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCGTCCCCATGGGTGGCTaGCTGATTATATCGATGATA +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRVPMGG*LIISMI
Trigger: TATCATCGATATAATCAGCAAGCCACCCATGGGGAC...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCAACGTGCCGACTTTGTaGTTCAGCAGGCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: TDRRARALSEMEQAAPYSNVPTL*FSRPIQ
Trigger: CTGGATGGGCCTGCTGAACAACAAAGTCGGCACGTT...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGGTGGGTCACAGCTCTaGGACGTGTCTGGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSGGSQL*DVSGAR
Trigger: CCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGACTCGGTAGGCACGTCTaGCTCAGCACCAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: WRNCISIICTVKGWLLSRLGRHV*LSTRLH
Trigger: GTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAG...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCCGTTCTCTGCTCTTTTaGGCAGGAACAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLARSLLF*AGTGGG
Trigger: GCCTCCACCTGTTCCTGCCAAAAAGAGCAGAGAACG...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCGTGCTCCTGGAGGCTaGTGTTCTCGGGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSRAPGG*CSRGAL
Trigger: CAGAGCTCCCCGAGAACACAAGCCTCCAGGAGCACG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCAGTGGTGCTCACTGTTaGACCGCCTGCTCAGAGACA +
Preference number: 5 (lower is better)
Translates to: TDRRARALSEMEQAAPYSSGAHC*TACSET
Trigger: TGTCTCTGAGCAGGCGGTCAAACAGTGAGCACCACT...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS GCA 90 bp TGCTTATCAGAATACGGCTCCTCCGTGAGATCGATGCCTTCAGCGTaGAGCTTGTTTTCAGTGAGCGTTTCTAGATCCACTCCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CLSEYGSSVRSMPSA*SLFSVSVSRSTPRA
Trigger: TGCCCGGGGAGTGGATCTAGAAACGCTCACTGAAAACAAGCTGCACGCTGAAGGCATCGATCTCACGGAGGAGCCGTATTCTGATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 90 bp CAGCCATACAGTACAGTCCATATTCCCCAGCAGCCCATTGCACTTTaGAGGGAGTCAGCATGCTCAGGCCCAGCTGTTTTCCCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: QPYSTVHIPQQPIAL*RESACSGPAVFPQV
Trigger: TACTTGAGGGAAAACAGCTGGGCCTGAGCATGCTGACTCCCTGCAAAGTGCAATGGGCTGCTGGGGAATATGGACTGTACTGTATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637498.1
CDS-3UTR CAA 90 bp AAAGGGGCTTCTTGTGCACGCCAGAGTAGAGGGCGGACCGTTCATCCAGGACCGCTCTTGAATTGCAGTTaGATGAGCCATCAAACGTTG +
Preference number: 5 (lower is better)
Translates to: KGASCARQSRGRTVHPGPLLNCS*MSHQTL
Trigger: CAACGTTTGATGGCTCATCAAACTGCAATTCAAGAG...CGGTCCTGGATGAACGGTCCGCCCTCTACTCTGGCGTGCACAAGAAGCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCAGTCCCCATGGGTGGCTaGCTGATTATATCGATGATA +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPVPMGG*LIISMI
Trigger: TATCATCGATATAATCAGCAAGCCACCCATGGGGAC...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGATCCTCCACAGACTaGGGCTGGGGTGGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQRSSTD*GWGGRP
Trigger: AGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATGGTGGGTCACAGCTCTaGGACGTGTCTGGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYGGSQL*DVSGAR
Trigger: CCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACC...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGTCAGTAGCAATGCATaGTCGACAGCAGAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAVSSNA*STAESC
Trigger: GCAAGACTCTGCTGTCGACAATGCATTGCTACTGAC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CGAGGGGGCTTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCCAGCCAGTTGGCATCTaGGTTCTTTTGTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RGGFSGGEDPQSCAKVSRQPVGI*VLLSSE
Trigger: TTCAGAAGACAAAAGAACCAAGATGCCAACTGGCTG...GCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAAGCCCCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ACAGACAGAAGAGCAAGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCCCTGAAAACCCAGGTTaGAAATCCCACGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: TDRRARALSEMEQAAPYSPENPG*KSHGSD
Trigger: GTCAGAGCCGTGGGATTTCAAACCTGGGTTTTCAGG...GGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCTTGCTCTTCTGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTTCCCCATCTTCCGACTaGACGCTTTCCCGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSSPSSD*TLSRLL
Trigger: CAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGGGA...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGCATCTACCCCTTCTTaGGTGCCCAGGGGATGGTGT +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSASTPS*VPRGWC
Trigger: ACACCATCCCCTGGGCACCAAAGAAGGGGTAGATGC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACAGCCAGTTGGCATCTaGGTTCTTTTGTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPQPVGI*VLLSSE
Trigger: TTCAGAAGACAAAAGAACCAAGATGCCAACTGGCTG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGGCACTATCAGAAATGGAACAGGCTGCCCCCTACTCCTCCCAGCCTCTACCACTCTTGAATTGCAGTTaGATGAGCCATCAAACGTTG +
Preference number: 5 (lower is better)
Translates to: RALSEMEQAAPYSSQPLPLLNCS*MSHQTL
Trigger: CAACGTTTGATGGCTCATCAAACTGCAATTCAAGAG...TGGTAGAGGCTGGGAGGAGTAGGGGGCAGCCTGTTCCATTTCTGATAGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCCCCCGGCCTTGAGCTaGGGCTTGTCCAAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHPPALS*GLSKCS
Trigger: CGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTAACGTGCCGACTTTGTaGTTCAGCAGGCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSNVPTL*FSRPIQ
Trigger: CTGGATGGGCCTGCTGAACAACAAAGTCGGCACGTT...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCTCCTGGTGGGGCGTTaGGGTTTCTCCTCGTCTTCA +
Preference number: 5 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYLLVGR*GFSSSS
Trigger: TGAAGACGAGGAGAAACCCAAACGCCCCACCAGGAG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGATCCTCCACAGACTaGGGCTGGGGTGGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRSSTD*GWGGRP
Trigger: AGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGCACCAGGCTCCACTaGAAGGTCATCCAGGGAATG +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQSTRLH*KVIQGM
Trigger: CATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAAGGTTTCACGCTGTTaGGCCACACGCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQKVSRC*ATRQAF
Trigger: AAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCTT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCAGCATTCGCAGCCAGTaGGCATCTTGGTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLASIRSQ*ASWFFC
Trigger: ACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCATATCCTTTTAGGTGGTaGCAAACTTCACGGAACTGC +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAYPFRW*QTSRNC
Trigger: GCAGTTCCGTGAAGTTTGCAACCACCTAAAAGGATA...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS TCA 90 bp ATGTTTCCCAGTGAACCGTCCCTGCAATCTTGTTCCTCCATGAAGTaGGCTGCTGGCCATACGTTCAAATGGTCTCTGACTTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: MFPSEPSLQSCSSMK*AAGHTFKWSLTSSL
Trigger: CAGAGAGGAAGTCAGAGACCATTTGAACGTATGGCCAGCAGCTCACTTCATGGAGGAACAAGATTGCAGGGACGGTTCACTGGGAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS GCA 90 bp GCTGTGGTTTGGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTTaGTGTTTAACGTGGTCATCAACTACTTCTCCAAACCAAAATTCT +
Preference number: 5 (lower is better)
Translates to: AVVWARLSSVWPIRA*CLTWSSTTSPNQNS
Trigger: AGAATTTTGGTTTGGAGAAGTAGTTGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CCA 90 bp TTCCGTCAGCATGGACCTAAAAGACACCTTCTTGGAAGGTGGTCCTaGGCAGAGGGAGAAAGACTTACTTTCTTTCCACTTCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FRQHGPKRHLLGRWS*AEGERLTFFPLLGL
Trigger: CAACCCCAGAAGTGGAAAGAAAGTAAGTCTTTCTCCCTCTGCCCAGGACCACCTTCCAAGAAGGTGTCTTTTAGGTCCATGCTGACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS CCA 90 bp AATTCCAGTTTCACTGCTGTGGTTTGGGCCAGGCTCTCATCTGTCTaGCCCATCAGGGCTTGCTGTTTAACGTGGTCATCAACTACTTCT +
Preference number: 5 (lower is better)
Translates to: NSSFTAVVWARLSSV*PIRACCLTWSSTTS
Trigger: AGAAGTAGTTGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCAGTGAAACTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CCA 90 bp CTCCACCGTCACAGCTCAGTATCCGAAGGAGAAAGGGGAAGACACTaGATTCAATTAGCTTCTTTCTGCTTGCTGACTGATTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LHRHSSVSEGERGRH*IQLASFCLLTDSPV
Trigger: GACTGGGGAATCAGTCAGCAAGCAGAAAGAAGCTAATTGAATCCAGTGTCTTCCCCTTTCTCCTTCGGATACTGAGCTGTGACGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637729.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGTTTCCCGGTTGCTGGTaGAGGAATCAGTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQFPGCW*RNQWCS
Trigger: TGAGCACCACTGATTCCTCAACCAGCAACCGGGAAA...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGTTGACGCTTTCCCGGTaGCTGGTTGAGGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQLTLSR*LVEESV
Trigger: CACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAA...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGTTGAACGTGCCGACTTaGTTGTTCAGCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQLNVPT*LFSRPI
Trigger: GATGGGCCTGCTGAACAACAAAGTCGGCACGTTCAA...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCTCCTGGTGGGGCGTTaGGGTTTCTCCTCGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTLLVGR*GFSSSS
Trigger: TGAAGACGAGGAGAAACCCAAACGCCCCACCAGGAG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCGGCTCGGTGGATGACTaGGCAGATAGGAGGCTAGCT +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTGSVDD*ADRRLA
Trigger: AGCTAGCCTCCTATCTGCCAAGTCATCCACCGAGCC...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAGGTTCAGAAAATCTCTaGCTTTGGGTCAGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAGSENL*LWVSSN
Trigger: ATTGCTACTGACCCAAAGCAAGAGATTTTCTGAACC...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp GATGGAGACGTGGTGAGAGAGTCTGAGTCATCTTCGGGAGGTTTCTCAGGAGAGGTGGAGTTTACCAGCTaGTGTAACCTCTTAAACTTC +
Preference number: 5 (lower is better)
Translates to: DGDVVRESESSSGGFSGEVEFTS*CNLLNF
Trigger: GAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCAC...CTCTCCTGAGAAACCTCCCGAAGATGACTCAGACTCTCTCACCACGTCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGCTGTGATGGAATTTaGGGCTGCATTCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGCDGI*GCILCS
Trigger: TGAGCAGAGAATGCAGCCCAAAATTCCATCACAGCC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCAGACAGAGAAGGCACTaGGCTCAGTGTGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTRQRRH*AQCAEA
Trigger: GGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTCT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCGGTCAGGAGTTGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTGQELS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCAACTCCTGACC...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp AGGTTTCACGCTGTTTGGCCACACGCCAGGCCTTTCTTCTGGATCTGGTCTGCAATTTCTCTCGCTCCTTaGTTATCTCATCTCTTACAC +
Preference number: 5 (lower is better)
Translates to: RFHAVWPHARPFFWIWSAISLAP*LSHLLH
Trigger: GTGTAAGAGATGAGATAACAAAGGAGCGAGAGAAAT...TGCAGACCAGATCCAGAAGAAAGGCCTGGCGTGTGGCCAAACAGCGTGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS TCA 90 bp AAATTAAGATTAGGCACTCCTGGAACATGTCTCTCTGGAGTTACATaGTCAGGCAGGCTCCACCGTCACAGCTCAGTATCCGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: KLRLGTPGTCLSGVT*SGRLHRHSSVSEGE
Trigger: TTCTCCTTCGGATACTGAGCTGTGACGGTGGAGCCTGCCTGATCATGTAACTCCAGAGAGACATGTTCCAGGAGTGCCTAATCTTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637729.1
CDS-3UTR CAA 90 bp TTTTCTGGAGGAGAGGATCCTCAGTCCTGTGCCAAGGTTTCACGCTGTTTGGCCAGCTGTCTTCTGAGTTaGATTTATGAAGAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: FSGGEDPQSCAKVSRCLASCLLS*IYEEGS
Trigger: AGAACCCTCTTCATAAATCAAACTCAGAAGACAGCT...GGCCAAACAGCGTGAAACCTTGGCACAGGACTGAGGATCCTCTCCTCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GATGGAGACGTGGTGAGAGAGTCTGAGTCATCTTCGGGAGGTTTCTCAGGAGAGGATTGTTCTCTTGAATaGCAGTTTGATGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DGDVVRESESSSGGFSGEDCSLE*QFDEPS
Trigger: TGATGGCTCATCAAACTGCAATTCAAGAGAACAATC...CTCTCCTGAGAAACCTCCCGAAGATGACTCAGACTCTCTCACCACGTCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACAGCACCAGGCTCCACTaGAAGGTCATCCAGGGAATG +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHSTRLH*KVIQGM
Trigger: CATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCT...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATCCTTCAGCGTGCAGCTaGTTTTCAGTGAGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYPSACS*FSVSVS
Trigger: AGAAACGCTCACTGAAAACAAGCTGCACGCTGAAGG...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 90 bp TGTGTTAGAGGATCCATGTACTCAGGCATCCTGAAAACCCAGGTTTaGAATCCCACGGCTCTGACACCAACAGCAAGCTTTTCAAACAGA +
Preference number: 5 (lower is better)
Translates to: CVRGSMYSGILKTQV*NPTALTPTASFSNR
Trigger: TCTGTTTGAAAAGCTTGCTGTTGGTGTCAGAGCCGTGGGATTTCAAACCTGGGTTTTCAGGATGCCTGAGTACATGGATCCTCTAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCATGAGCCATCAAACGTaGGGTAAGAACCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTMSHQT*GKNHLA
Trigger: GGCCAGATGGTTCTTACCCAACGTTTGATGGCTCAT...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGGAGATGATGGAGGAATaGCATCAGCATCATATGCAC +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQEMMEE*HQHHMH
Trigger: GTGCATATGATGCTGATGCAATTCCTCCATCATCTC...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TTGTGTAACCTCTTAAACTTCACCGACTCCTCAGTCTCATCATCCGATTGTTCTTGGGCCTCGTATTCCTaGAGCTACAGAGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LCNLLNFTDSSVSSSDCSWASYS*SYRAVF
Trigger: GAAGACAGCTCTGTAGCTCAAGGAATACGAGGCCCA...AGAACAATCGGATGATGAGACTGAGGAGTCGGTGAAGTTTAAGAGGTTACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGTGGAGTTTACCAGCTaGTGTAACCTCTTAAACTTC +
Preference number: 5 (lower is better)
Translates to: WRNCISIICTVKGWLLSRVEFTS*CNLLNF
Trigger: GAAGTTTAAGAGGTTACACAAGCTGGTAAACTCCAC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTCTCCTTCTTTACCCATaGGGTCAGAATTATTACTGC +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSLLLYP*GQNYYC
Trigger: GCAGTAATAATTCTGACCCAATGGGTAAAGAAGGAG...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGAGGTTCAGAAAATCTCTaGCTTTGGGTCAGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: WRNCISIICTVKGWLLSRGSENL*LWVSSN
Trigger: ATTGCTACTGACCCAAAGCAAGAGATTTTCTGAACC...TCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCCTTCAGCGTGCAGCTaGTTTTCAGTGAGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHPSACS*FSVSVS
Trigger: AGAAACGCTCACTGAAAACAAGCTGCACGCTGAAGG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp ATGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTTGTCCAGATGAAGATGCCACATTaGCCCAGAAAGAAAACGGTT +
Preference number: 5 (lower is better)
Translates to: MEELHQHHMHSERVALVQMKMPH*PRKKTV
Trigger: AACCGTTTTCTTTCTGGGCAAATGTGGCATCTTCAT...CTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS GCA 90 bp AAGTCTCCTTCTTTACCCATTGGGTCAGAATTATTACTGCCAACGTaGAGAGAGCGATTCGTCAAGTCAAATCCTCCAAAACTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: KSPSLPIGSELLLPT*RERFVKSNPPKLQV
Trigger: AACCTGCAGTTTTGGAGGATTTGACTTGACGAATCGCTCTCTGCACGTTGGCAGTAATAATTCTGACCCAATGGGTAAAGAAGGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367467.8
ENST00000622663.1
ENST00000636279.1
CDS-3UTR CAA 90 bp GACAGACTGGAGATAGAGCATTCGCAGCCAGTTGGCATCTTGGTTCTTTTGTCTGATTGTTCTCTTGAATaGCAGTTTGATGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DRLEIEHSQPVGILVLLSDCSLE*QFDEPS
Trigger: TGATGGCTCATCAAACTGCAATTCAAGAGAACAATC...AGACAAAAGAACCAAGATGCCAACTGGCTGCGAATGCTCTATCTCCAGTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATATGATATCTCCTTTCTaGAGCTTGAGTGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYMISPF*SLSESV
Trigger: CACAGACTCACTCAAGCTCAAGAAAGGAGATATCAT...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TGGAAACATCCCAGAGAGGTTCGATGTCTGCCTAAGCTGAAGATGTGGAAGTATTCATTAAAGGCAATGTaGGGTAATTGCCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: WKHPREVRCLPKLKMWKYSLKAM*GNCPTG
Trigger: ACCAGTTGGGCAATTACCCAACATTGCCTTTAATGA...ATACTTCCACATCTTCAGCTTAGGCAGACATCGAACCTCTCTGGGATGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCTCCTTCTTTACCCATaGGGTCAGAATTATTACTGC +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTLLLYP*GQNYYC
Trigger: GCAGTAATAATTCTGACCCAATGGGTAAAGAAGGAG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 90 bp TCATCATTAGCTGAATCCGCTCCTCATCGCTCATCGTTATTTCACTaGCAACATAACCAACGTCTTCTCCTTTTGAAGTCTGTCTCATTA +
Preference number: 5 (lower is better)
Translates to: SSLAESAPHRSSLFH*QHNQRLLLLKSVSL
Trigger: TAATGAGACAGACTTCAAAAGGAGAAGACGTTGGTTATGTTGCCAGTGAAATAACGATGAGCGATGAGGAGCGGATTCAGCTAATGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp TCTTCCACCCTAATTAGTTTCTTTCTGACTCTGCGAGTGGAGTTTACCAGCTTGAGCTGTCTTCTGAGTTaGATTTATGAAGAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SSTLISFFLTLRVEFTSLSCLLS*IYEEGS
Trigger: AGAACCCTCTTCATAAATCAAACTCAGAAGACAGCT...CAAGCTGGTAAACTCCACTCGCAGAGTCAGAAAGAAACTAATTAGGGTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS-3UTR CAA 90 bp TCAATACTGCAGCGCGACGATCCACACAGTAACGATACTAAACTGGTTAAAACCCAACGTCTTCTCCTTTaGAAGTCTGTCTCATTATTC +
Preference number: 5 (lower is better)
Translates to: SILQRDDPHSNDTKLVKTQRLLL*KSVSLF
Trigger: GAATAATGAGACAGACTTCAAAAGGAGAAGACGTTG...GGTTTTAACCAGTTTAGTATCGTTACTGTGTGGATCGTCGCGCTGCAGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACCATCCGATTGTTCTCTaGAATTGCAGTTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHHPIVL*NCSLMS
Trigger: GCTCATCAAACTGCAATTCAAGAGAACAATCGGATG...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS-3UTR CAA 90 bp CTAAACTGGTTAAAACCAAAAGCAGTCACTATGAATACAGACACACACGCGCACTCATTAAAGGCAATGTaGGGTAATTGCCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: LNWLKPKAVTMNTDTHAHSLKAM*GNCPTG
Trigger: ACCAGTTGGGCAATTACCCAACATTGCCTTTAATGA...GTGCGCGTGTGTGTCTGTATTCATAGTGACTGCTTTTGGTTTTAACCAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp TCACGTCGGTCCAGAGTCGGGAGAACGCCTCGGATGTaGCAGCACCCGGCTTGGGCTCCGGTTCCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: SRRSRVGRTPRM*QHPAWAPVPAP
Trigger: CGGAGCCGGAACCGGAGCCCAAGCCGGGTGCTGGCACATCCGAGGCGTTCTCCCGACTCTGGACCGACGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS GCA 72 bp CCGGGGAAGCCGCAGCTCCCGCCCCCTTTGCCTTTCTaGCGGAGCAGCTGCAGGTCACAGGTGGTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PGKPQLPPPLPF*RSSCRSQVVLV
Trigger: CACCAGCACCACCTGTGACCTGCAGCTGCTCCGGCAGAAAGGCAAAGGGGGCGGGAGCTGCGGCTTCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CCA 72 bp GGGGCCCTTCGCAGGCGCCCGCACCTCGGGTCTAGGTaGCCACGGGCTGCGCGACTGACAACTCCAGAAACT +
Preference number: 6 (lower is better)
Translates to: GALRRRPHLGSR*PRAARLTTPET
Trigger: AGTTTCTGGAGTTGTCAGTCGCGCAGCCCGTGGCCACCTAGACCCGAGGTGCGGGCGCCTGCGAAGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS GCA 72 bp GGCCAGTCAGCAGGGTCCAGGGCAGCCGACTGCCGGTaGTGGGCCTCGTATTCCTTGAGCCTAGCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: GQSAGSRAADCR*WASYSLSLASA
Trigger: AGCACTTGCTAGGCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGACCCTGCTGACTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS GCA 72 bp CCAGCAGGCACCGCCTCAGGTCCTGTCTCTCAGCCTTaGTCAGGGTCCTGTCTGAGGCAGGCCGCACTAGCT +
Preference number: 6 (lower is better)
Translates to: PAGTASGPVSQP*SGSCLRQAALA
Trigger: AGCTAGTGCGGCCTGCCTCAGACAGGACCCTGAGCAAGGCTGAGAGACAGGACCTGAGGCGGTGCCTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS GCA 72 bp GGCCAGTCAGCAGGGTCCAGGGCAGCCGACTGCCGGTaGTGGGCCTCGTATTCCTTGAGCTACAGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GQSAGSRAADCR*WASYSLSYRAV
Trigger: GACAGCTCTGTAGCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGACCCTGCTGACTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS CCA 72 bp TCCAGGGAATGGGATCGGGGCCAAGTGTCCACAGTCTaGGGGCCCTCCAGGGTCTCACAGCTCCGGCAGATG +
Preference number: 6 (lower is better)
Translates to: SREWDRGQVSTV*GPSRVSQLRQM
Trigger: CATCTGCCGGAGCTGTGAGACCCTGGAGGGCCCCCAGACTGTGGACACTTGGCCCCGATCCCATTCCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp GGCGGCGACGTCCCGCTCGGGCTGATCCAAGTCCTCTaGGTATCTCTGCACCAGGGCTTCAGGAATCCCACA +
Preference number: 6 (lower is better)
Translates to: GGDVPLGLIQVL*VSLHQGFRNPT
Trigger: TGTGGGATTCCTGAAGCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp CAGCTCCCGCCCCCTTTGCCTTTCTGCCGGAGCAGCTaGAGGTCACAGGTGGTGCTGGTGACGCCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: QLPPPLPFCRSS*RSQVVLVTPFL
Trigger: CAGAAAAGGCGTCACCAGCACCACCTGTGACCTGCAGCTGCTCCGGCAGAAAGGCAAAGGGGGCGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CCA 72 bp CAGTCAGCAGGGTCCAGGGCAGCCGACTGCCGGTGCTaGGCCTCGTATTCCTTGAGCCTAGCAAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: QSAGSRAADCRC*ASYSLSLASAS
Trigger: GGAAGCACTTGCTAGGCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGACCCTGCTGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS CCA 72 bp CCGATCCAGGAGATCCTCCACAGACTTGGGCTGGGGTaGTCGTCCTTTCCGACGCCTCCTGGTGGGGCGTTT +
Preference number: 6 (lower is better)
Translates to: PIQEILHRLGLG*SSFPTPPGGAF
Trigger: AAACGCCCCACCAGGAGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCTCCTGGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp CTGGTCAAAGCCGGGCCCAGCTTCACACCGTGCTCCTaGAGGCTTGTGTTCTCGGGGAGCTCTGAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LVKAGPSFTPCS*RLVFSGSSESQ
Trigger: CTGGCTCTCAGAGCTCCCCGAGAACACAAGCCTCCAGGAGCACGGTGTGAAGCTGGGCCCGGCTTTGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp GCTTCCGAAGCTGCTTCACCCGGATCTGGTCCATGTTaGCGGCGACGTCCCGCTCGGGCTGATCCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: ASEAASPGSGPC*RRRPARADPSP
Trigger: AGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCAGCTTCGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TGTGATGCCGGCCTCCTGAAGGCAAGTGTGAGACAGAGAAGGCACTaGGCTCAGTGTGCTGAAGCCCGCGGTGGAGAGGGTGCCGGCGTA +
Preference number: 6 (lower is better)
Translates to: CDAGLLKASVRQRRH*AQCAEARGGEGAGV
Trigger: TACGCCGGCACCCTCTCCACCGCGGGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTCTCACACTTGCCTTCAGGAGGCCGGCATCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 72 bp ATCTGGTCCATGTTGGCGGCGACGTCCCGCTCGGGCTaGTCCAAGTCCTCTGCGTATCTCTGCACCAGGGCT +
Preference number: 6 (lower is better)
Translates to: IWSMLAATSRSG*SKSSAYLCTRA
Trigger: AGCCCTGGTGCAGAGATACGCAGAGGACTTGGATCAGCCCGAGCGGGACGTCGCCGCCAACATGGACCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp ACCTTCCTGGTCAAAGCCGGGCCCAGCTTCACACCGTaGTCCTGGAGGCTTGTGTTCTCGGGGAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: TFLVKAGPSFTP*SWRLVFSGSSE
Trigger: CTCAGAGCTCCCCGAGAACACAAGCCTCCAGGAGCACGGTGTGAAGCTGGGCCCGGCTTTGACCAGGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp CCACTTGGAATCGCCATGCGGTGCTGCTTCCGAAGCTaGTTCACCCGGATCTGGTCCATGTTGGCGGCGACG +
Preference number: 6 (lower is better)
Translates to: PLGIAMRCCFRS*FTRIWSMLAAT
Trigger: CGTCGCCGCCAACATGGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCACCGCATGGCGATTCCAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp CAGTCAGCAGGGTCCAGGGCAGCCGACTGCCGGTGCTaGGCCTCGTATTCCTTGAGCTACAGAGCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: QSAGSRAADCRC*ASYSLSYRAVF
Trigger: GAAGACAGCTCTGTAGCTCAAGGAATACGAGGCCCAGCACCGGCAGTCGGCTGCCCTGGACCCTGCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637469.1
CDS CAA 72 bp GGTGGTCGTCCTTTCCGACGCCTCCTGGTGGGGCGTTaGGGTTTCTCCTCGTCTTCACTGAGCACGTCCACG +
Preference number: 6 (lower is better)
Translates to: GGRPFRRLLVGR*GFSSSSLSTST
Trigger: CGTGGACGTGCTCAGTGAAGACGAGGAGAAACCCAAACGCCCCACCAGGAGGCGTCGGAAAGGACGACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp TTAATCCGATCCAGGAGATCCTCCACAGACTTGGGCTaGGGTGGTCGTCCTTTCCGACGCCTCCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LIRSRRSSTDLG*GGRPFRRLLVG
Trigger: CCCCACCAGGAGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCTCCTGGATCGGATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp CATCCTGAGTCTCGGGGTGAGCATCCACTCAGGCCCTaGCTGTCAACGAGCAGCTTCTCCTGGGATCCTGAC +
Preference number: 6 (lower is better)
Translates to: HPESRGEHPLRP*LSTSSFSWDPD
Trigger: GTCAGGATCCCAGGAGAAGCTGCTCGTTGACAGCCAGGGCCTGAGTGGATGCTCACCCCGAGACTCAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp CGACAGCAGAGTCTTGCTCCAGGGGCTGGGCCTTCGTaGAAGAGGCGGTCGTCTTCTGTGGCACTTCAGGTA +
Preference number: 6 (lower is better)
Translates to: RQQSLAPGAGPS*KRRSSSVALQV
Trigger: TACCTGAAGTGCCACAGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCCTGGAGCAAGACTCTGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp TTTCTAGATCCACTCCCCGGGCACAGGAGACCTTCCTaGTCAAAGCCGGGCCCAGCTTCACACCGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: FLDPLPGHRRPS*SKPGPASHRAP
Trigger: AGGAGCACGGTGTGAAGCTGGGCCCGGCTTTGACCAGGAAGGTCTCCTGTGCCCGGGGAGTGGATCTAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp GGCACGGAAACACACATCCTTGCCCTCAAGGGCAAGTaGGGGCAAGTGGCCTGTGGGGGCATCTGTCTCAAC +
Preference number: 6 (lower is better)
Translates to: GTETHILALKGK*GQVACGGICLN
Trigger: GTTGAGACAGATGCCCCCACAGGCCACTTGCCCCCACTTGCCCTTGAGGGCAAGGATGTGTGTTTCCGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 72 bp CTGAGGGGGCGGTTCTGTCACCTCGGTAGGCACGTCTaGCTCAGCACCAGGCTCCACTTGAAGGTCATCCAG +
Preference number: 6 (lower is better)
Translates to: LRGRFCHLGRHV*LSTRLHLKVIQ
Trigger: CTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAGGTGACAGAACCGCCCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 72 bp GGCCTCCTGAAGGCAAGTGTGAGACAGAGAAGGCACTaGGCTCAGTGTGCTGAAGCCCGCGGTGGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: GLLKASVRQRRH*AQCAEARGGEG
Trigger: ACCCTCTCCACCGCGGGCTTCAGCACACTGAGCCAAGTGCCTTCTCTGTCTCACACTTGCCTTCAGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp CTGAGAGAACTGCGAAGACTTTCTACAGAACCCCCGGCCTTGAGCTaGGGCTTGTCCAAGTGTTCGGGGTCGGGCTGTGAAGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: LRELRRLSTEPPALS*GLSKCSGSGCEGGG
Trigger: CCCTCCGCCTTCACAGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCTTCGCAGTTCTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS TCA 72 bp GCCAAGCGACTCTTCGATCTGGGACCGCAGCTGAAGTaGCGTGGGGCTAGCATCGGGTTTCTCCACTTCCAG +
Preference number: 6 (lower is better)
Translates to: AKRLFDLGPQLK*RGASIGFLHFQ
Trigger: CTGGAAGTGGAGAAACCCGATGCTAGCCCCACGTCACTTCAGCTGCGGTCCCAGATCGAAGAGTCGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000367469.5
CDS TCA 72 bp TCGGTAGGCACGTCTTGCTCAGCACCAGGCTCCACTTaGAGGTCATCCAGGGAATGGGATCGGGGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: SVGTSCSAPGST*RSSREWDRGQV
Trigger: CACTTGGCCCCGATCCCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 72 bp TGCACCCAGGAGAGACGGGCTTTCGGCAGATTTCCGTaGGTCCACCACTTGGAATCGCCATGCGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: CTQERRAFGRFP*VHHLESPCGAA
Trigger: AGCAGCACCGCATGGCGATTCCAAGTGGTGGACTCACGGAAATCTGCCGAAAGCCCGTCTCTCCTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp TCCGTGAGTCCACCACTTGGAATCGCCATGCGGTGCTaGTTCCGAAGCTGCTTCACCCGGATCTGGTCCATG +
Preference number: 6 (lower is better)
Translates to: SVSPPLGIAMRC*FRSCFTRIWSM
Trigger: CATGGACCAGATCCGGGTGAAGCAGCTTCGGAAGCAGCACCGCATGGCGATTCCAAGTGGTGGACTCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp TATTCAAACCAGTCACACCAGGTGGGTCACAGCTCTTaGACGTGTCTGGGGCAAGGCCACCACCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: YSNQSHQVGHSS*TCLGQGHHPAC
Trigger: GCAGGCTGGGTGGTGGCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACCTGGTGTGACTGGTTTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp AATGCATTGTCGACAGCAGAGTCTTGCTCCAGGGGCTaGGCCTTCGTGGAAGAGGCGGTCGTCTTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: NALSTAESCSRG*AFVEEAVVFCG
Trigger: GCCACAGAAGACGACCGCCTCTTCCACGAAGGCCCAGCCCCTGGAGCAAGACTCTGCTGTCGACAATGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 72 bp AGACTTTCTACAGAACCCCCGGCCTTGAGCTTGGGCTaGTCCAAGTGTTCGGGGTCGGGCTGTGAAGGCGGA +
Preference number: 6 (lower is better)
Translates to: RLSTEPPALSLG*SKCSGSGCEGG
Trigger: TCCGCCTTCACAGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS CAA 72 bp CTCGGTAGGCACGTCTTGCTCAGCACCAGGCTCCACTaGAAGGTCATCCAGGGAATGGGATCGGGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: LGRHVLLSTRLH*KVIQGMGSGPS
Trigger: ACTTGGCCCCGATCCCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TGCCCACTGAGAGAACTGCGAAGACTTTCTACAGAACCCCCGGCCTaGAGCTTGGGCTTGTCCAAGTGTTCGGGGTCGGGCTGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: CPLRELRRLSTEPPA*SLGLSKCSGSGCEG
Trigger: GCCTTCACAGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCTTCGCAGTTCTCTCAGTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS CAA 90 bp TTCTGTCACCTCGGTAGGCACGTCTTGCTCAGCACCAGGCTCCACTaGAAGGTCATCCAGGGAATGGGATCGGGGCCAAGTGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: FCHLGRHVLLSTRLH*KVIQGMGSGPSVHS
Trigger: ACTGTGGACACTTGGCCCCGATCCCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAGGTGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp AGGTACAATCTGAGGGGGCGGTTCTGTCACCTCGGTAGGCACGTCTaGCTCAGCACCAGGCTCCACTTGAAGGTCATCCAGGGAATGGGA +
Preference number: 6 (lower is better)
Translates to: RYNLRGRFCHLGRHV*LSTRLHLKVIQGMG
Trigger: TCCCATTCCCTGGATGACCTTCAAGTGGAGCCTGGTGCTGAGCAAGACGTGCCTACCGAGGTGACAGAACCGCCCCCTCAGATTGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 72 bp GAGAACTGCGAAGACTTTCTACAGAACCCCCGGCCTTaGGCTTGGGCTTGTCCAAGTGTTCGGGGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: ENCEDFLQNPRP*AWACPSVRGRA
Trigger: AGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCTTCGCAGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS CAA 72 bp CTGCGAAGACTTTCTACAGAACCCCCGGCCTTGAGCTaGGGCTTGTCCAAGTGTTCGGGGTCGGGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: LRRLSTEPPALS*GLSKCSGSGCE
Trigger: TTCACAGCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCTTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS CAA 72 bp AGAGAACTGCGAAGACTTTCTACAGAACCCCCGGCCTaGAGCTTGGGCTTGTCCAAGTGTTCGGGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: RELRRLSTEPPA*SLGLSKCSGSG
Trigger: GCCCGACCCCGAACACTTGGACAAGCCCAAGCTCAAGGCCGGGGGTTCTGTAGAAAGTCTTCGCAGTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS CAA 72 bp TTATTCAAACCAGTCACACCAGGTGGGTCACAGCTCTaGGACGTGTCTGGGGCAAGGCCACCACCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LFKPVTPGGSQL*DVSGARPPPSL
Trigger: CAGGCTGGGTGGTGGCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACCTGGTGTGACTGGTTTGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TGGAGGAATTGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTaGTCCAGAGAGGCCCATTCCGGGCCTGGCTACATGGCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: WRNCISIICTVKGWL*SREAHSGPGYMASG
Trigger: CCCTGAGGCCATGTAGCCAGGCCCGGAATGGGCCTCTCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCAATTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 72 bp CCCATCTTCCGACTTGACGCTTTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCACTGTTTGACCGCCTGC +
Preference number: 6 (lower is better)
Translates to: PIFRLDAFPVAG*GISGAHCLTAC
Trigger: GCAGGCGGTCAAACAGTGAGCACCACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS CAA 72 bp TTTAGGTTAATCCGATCCAGGAGATCCTCCACAGACTaGGGCTGGGGTGGTCGTCCTTTCCGACGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: FRLIRSRRSSTD*GWGGRPFRRLL
Trigger: CAGGAGGCGTCGGAAAGGACGACCACCCCAGCCCAAGTCTGTGGAGGATCTCCTGGATCGGATTAACCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS TCA 72 bp TGCTCACTGTTTGACCGCTCATGGAGCTCTGCCCACTaGGAGAACTGCGAAGACTTTCTACAGAACCCCCGG +
Preference number: 6 (lower is better)
Translates to: CSLFDRSWSSAH*ENCEDFLQNPR
Trigger: CCGGGGGTTCTGTAGAAAGTCTTCGCAGTTCTCTCAGTGGGCAGAGCTCCATGAGCGGTCAAACAGTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000635969.1
CDS GCA 72 bp TCTGAAACTCCTCCAGGGACACCAGAAGGTGGTGCCTaGGACGGTGGTTGTCATAGAAGCAAACACCATCCG +
Preference number: 6 (lower is better)
Translates to: SETPPGTPEGGA*DGGCHRSKHHP
Trigger: CGGATGGTGTTTGCTTCTATGACAACCACCGTCGCAGGCACCACCTTCTGGTGTCCCTGGAGGAGTTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CCA 72 bp TCCGATGCTGGCCCTGTAATTCCAGTTTCACTGCTGTaGTTTGGGCCAGGCTCTCATCTGTCTGGCCCATCA +
Preference number: 6 (lower is better)
Translates to: SDAGPVIPVSLL*FGPGSHLSGPS
Trigger: TGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 72 bp TGCATCAGCATCATATGCACAGTGAAAGGGTGGCTCTaGTCCAGAGAGGCCCATTCCGGGCCTGGCTACATG +
Preference number: 6 (lower is better)
Translates to: CISIICTVKGWL*SREAHSGPGYM
Trigger: CATGTAGCCAGGCCCGGAATGGGCCTCTCTGGACAAGAGCCACCCTTTCACTGTGCATATGATGCTGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 72 bp AAGTGGCCTGTGGGGGCATCTGTCTCAACTACTTCCTaGTCCTCTCTTAGGAGGACTCCAGCAGGACTCTCC +
Preference number: 6 (lower is better)
Translates to: KWPVGASVSTTS*SSLRRTPAGLS
Trigger: GGAGAGTCCTGCTGGAGTCCTCCTAAGAGAGGACAAGGAAGTAGTTGAGACAGATGCCCCCACAGGCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 72 bp AGCCATACAGTACAGTCCATATTCCCCAGCAGCCCATaGCACTTTGCAGGGAGTCAGCATGCTCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SHTVQSIFPSSP*HFAGSQHAQAQ
Trigger: CTGGGCCTGAGCATGCTGACTCCCTGCAAAGTGCAATGGGCTGCTGGGGAATATGGACTGTACTGTATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637498.1
CDS CAA 90 bp TCCTGGGCAGAGGGAGAAAGACTTACTTTCTTTCCACTTCTGGGGTaGACACGGCGCTACAGAAGCCAAGCGACTCTTCGATCTGGGACC +
Preference number: 6 (lower is better)
Translates to: SWAEGERLTFFPLLG*TRRYRSQATLRSGT
Trigger: GGTCCCAGATCGAAGAGTCGCTTGGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAAGAAAGTAAGTCTTTCTCCCTCTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS TCA 72 bp CCCATCTTCCGACTTGACGCTTTCCCGGTTGCTGGTTaGGGAATCAGTGGTGCTCACTGTTTGACCGCTCAT +
Preference number: 6 (lower is better)
Translates to: PIFRLDAFPVAG*GISGAHCLTAH
Trigger: ATGAGCGGTCAAACAGTGAGCACCACTGATTCCTCAACCAGCAACCGGGAAAGCGTCAAGTCGGAAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS TCA 72 bp CACAGCGGCCATGCTTATCAGAATACGGCTCCTCCGTaGGATCGATGCCTTCAGCGTGCAGCTTGTTTTCAG +
Preference number: 6 (lower is better)
Translates to: HSGHAYQNTAPP*DRCLQRAACFQ
Trigger: CTGAAAACAAGCTGCACGCTGAAGGCATCGATCTCACGGAGGAGCCGTATTCTGATAAGCATGGCCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS GCA 72 bp TCTCTTAGGAGGACTCCAGCAGGACTCTCCCTCCGATaGTGGCCCTGTAATTCCAGTTTCACTGCTGTGGTT +
Preference number: 6 (lower is better)
Translates to: SLRRTPAGLSLR*WPCNSSFTAVV
Trigger: AACCACAGCAGTGAAACTGGAATTACAGGGCCAGCATCGGAGGGAGAGTCCTGCTGGAGTCCTCCTAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS GCA 72 bp AGTACAGTCCATATTCCCCAGCAGCCCATTGCACTTTaGAGGGAGTCAGCATGCTCAGGCCCAGCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: STVHIPQQPIAL*RESACSGPAVF
Trigger: GAAAACAGCTGGGCCTGAGCATGCTGACTCCCTGCAAAGTGCAATGGGCTGCTGGGGAATATGGACTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637498.1
CDS CCA 72 bp GCTTCTTCGGTTTTTATTCAAACCAGTCACACCAGGTaGGTCACAGCTCTTGGACGTGTCTGGGGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: ASSVFIQTSHTR*VTALGRVWGKA
Trigger: GGCCTTGCCCCAGACACGTCCAAGAGCTGTGACCCACCTGGTGTGACTGGTTTGAATAAAAACCGAAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp GCCCTCCAGGGTCTCACAGCTCCGGCAGATGGAAACTaGGAGGCTTCTTCGGTTTTTATTCAAACCAGTCAC +
Preference number: 6 (lower is better)
Translates to: ALQGLTAPADGN*EASSVFIQTSH
Trigger: GTGACTGGTTTGAATAAAAACCGAAGAAGCCTCCCAGTTTCCATCTGCCGGAGCTGTGAGACCCTGGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp TTCACTGCTGTGGTTTGGGCCAGGCTCTCATCTGTCTaGCCCATCAGGGCTTGCTGTTTAACGTGGTCATCA +
Preference number: 6 (lower is better)
Translates to: FTAVVWARLSSV*PIRACCLTWSS
Trigger: TGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 72 bp CTGCTAAAAGACTTCAAGCTGGGCTCGGTGGATGACTaGGCAGATAGGAGGCTAGCTTTCCGAGTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: LLKDFKLGSVDD*ADRRLAFRVLP
Trigger: CGGCAAGACTCGGAAAGCTAGCCTCCTATCTGCCAAGTCATCCACCGAGCCCAGCTTGAAGTCTTTTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TCAGCCATACAGTACAGTCCATATTCCCCAGCAGCCCATTGCACTTaGCAGGGAGTCAGCATGCTCAGGCCCAGCTGTTTTCCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: SAIQYSPYSPAAHCT*QGVSMLRPSCFPSS
Trigger: ACTTGAGGGAAAACAGCTGGGCCTGAGCATGCTGACTCCCTGCAAAGTGCAATGGGCTGCTGGGGAATATGGACTGTACTGTATGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637498.1
CDS GCA 72 bp TGGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTTaGTGTTTAACGTGGTCATCAACTACTTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: WARLSSVWPIRA*CLTWSSTTSPN
Trigger: GTTTGGAGAAGTAGTTGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 90 bp CATCCGATTGTTCTCTTGAATTGCAGTTTGATGAGCCATCAAACGTaGGGTAAGAACCATCTGGCCAGTCAGCAGGGTCCAGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: HPIVLLNCSLMSHQT*GKNHLASQQGPGQP
Trigger: CGGCTGCCCTGGACCCTGCTGACTGGCCAGATGGTTCTTACCCAACGTTTGATGGCTCATCAAACTGCAATTCAAGAGAACAATCGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000637469.1
CDS CAA 90 bp ATGGGAACAGGGTGGAGTCCGTTAGCAAGGCGTTCTCTGCTCTTTTaGGCAGGAACAGGTGGAGGCTGTGATGGAATTTTGGGCTGCATT +
Preference number: 6 (lower is better)
Translates to: MGTGWSPLARRSLLF*AGTGGGCDGILGCI
Trigger: AATGCAGCCCAAAATTCCATCACAGCCTCCACCTGTTCCTGCCAAAAAGAGCAGAGAACGCCTTGCTAACGGACTCCACCCTGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TTGACTTTCAGCCATACAGTACAGTCCATATTCCCCAGCAGCCCATaGCACTTTGCAGGGAGTCAGCATGCTCAGGCCCAGCTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: LTFSHTVQSIFPSSP*HFAGSQHAQAQLFS
Trigger: GGAAAACAGCTGGGCCTGAGCATGCTGACTCCCTGCAAAGTGCAATGGGCTGCTGGGGAATATGGACTGTACTGTATGGCTGAAAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637498.1
CDS CAA 90 bp AACTGGTTTCTGCTAAAAGACTTCAAGCTGGGCTCGGTGGATGACTaGGCAGATAGGAGGCTAGCTTTCCGAGTCTTGCCGTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: NWFLLKDFKLGSVDD*ADRRLAFRVLPFSR
Trigger: CCTGGAAAACGGCAAGACTCGGAAAGCTAGCCTCCTATCTGCCAAGTCATCCACCGAGCCCAGCTTGAAGTCTTTTAGCAGAAACCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 90 bp TTATGCTTAAGCCAGCCGGCAGTGCACCAACCCAGCAGTCCCCGTTaGCAGGACATCTCTGAATCACAAATACGTGGACAGGATGAAAGT +
Preference number: 6 (lower is better)
Translates to: LCLSQPAVHQPSSPR*QDISESQIRGQDES
Trigger: ACTTTCATCCTGTCCACGTATTTGTGATTCAGAGATGTCCTGCAAACGGGGACTGCTGGGTTGGTGCACTGCCGGCTGGCTTAAGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS TCA 72 bp TTCCCAGTGAACCGTCCCTGCAATCTTGTTCCTCCATaGAGTGAGCTGCTGGCCATACGTTCAAATGGTCTC +
Preference number: 6 (lower is better)
Translates to: FPVNRPCNLVPP*SELLAIRSNGL
Trigger: GAGACCATTTGAACGTATGGCCAGCAGCTCACTTCATGGAGGAACAAGATTGCAGGGACGGTTCACTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS GCA 72 bp ACCGTCCCTGCAATCTTGTTCCTCCATGAAGTGAGCTaGTGGCCATACGTTCAAATGGTCTCTGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: TVPAILFLHEVS*WPYVQMVSDFL
Trigger: GAGGAAGTCAGAGACCATTTGAACGTATGGCCAGCAGCTCACTTCATGGAGGAACAAGATTGCAGGGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS GCA 72 bp GAATACGGCTCCTCCGTGAGATCGATGCCTTCAGCGTaGAGCTTGTTTTCAGTGAGCGTTTCTAGATCCACT +
Preference number: 6 (lower is better)
Translates to: EYGSSVRSMPSA*SLFSVSVSRST
Trigger: AGTGGATCTAGAAACGCTCACTGAAAACAAGCTGCACGCTGAAGGCATCGATCTCACGGAGGAGCCGTATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CCA 72 bp GGATGGTGTGTTCCTTCAAACTCGTGTCCTTTTCTGTaGCCCTCCAGAGGCGTCCTTGCTAAACCGTGTTTA +
Preference number: 6 (lower is better)
Translates to: GWCVPSNSCPFL*PSRGVLAKPCL
Trigger: TAAACACGGTTTAGCAAGGACGCCTCTGGAGGGCCACAGAAAAGGACACGAGTTTGAAGGAACACACCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000622663.1
CDS CAA 72 bp GAGGGAGAAAGACTTACTTTCTTTCCACTTCTGGGGTaGACACGGCGCTACAGAAGCCAAGCGACTCTTCGA +
Preference number: 6 (lower is better)
Translates to: EGERLTFFPLLG*TRRYRSQATLR
Trigger: TCGAAGAGTCGCTTGGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAAGAAAGTAAGTCTTTCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS CAA 72 bp TTGGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTaGCTGTTTAACGTGGTCATCAACTACTTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LGQALICLAHQG*LFNVVINYFSK
Trigger: TTTGGAGAAGTAGTTGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS CAA 90 bp TGCTGTGGTTTGGGCCAGGCTCTCATCTGTCTGGCCCATCAGGGCTaGCTGTTTAACGTGGTCATCAACTACTTCTCCAAACCAAAATTC +
Preference number: 6 (lower is better)
Translates to: CCGLGQALICLAHQG*LFNVVINYFSKPKF
Trigger: GAATTTTGGTTTGGAGAAGTAGTTGATGACCACGTTAAACAGCAAGCCCTGATGGGCCAGACAGATGAGAGCCTGGCCCAAACCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635873.1
CDS TCA 72 bp AGTGAACCGTCCCTGCAATCTTGTTCCTCCATGAAGTaGGCTGCTGGCCATACGTTCAAATGGTCTCTGACT +
Preference number: 6 (lower is better)
Translates to: SEPSLQSCSSMK*AAGHTFKWSLT
Trigger: AGTCAGAGACCATTTGAACGTATGGCCAGCAGCTCACTTCATGGAGGAACAAGATTGCAGGGACGGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS TCA 72 bp AGGGAGAAAGACTTACTTTCTTTCCACTTCTGGGGTTaGCACGGCGCTACAGAAGCCAAGCGACTCTTCGAT +
Preference number: 6 (lower is better)
Translates to: REKDLLSFHFWG*HGATEAKRLFD
Trigger: ATCGAAGAGTCGCTTGGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAAGAAAGTAAGTCTTTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS CCA 72 bp GTCCCTGCAATCTTGTTCCTCCATGAAGTGAGCTGCTaGCCATACGTTCAAATGGTCTCTGACTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: VPAILFLHEVSC*PYVQMVSDFLS
Trigger: AGAGAGGAAGTCAGAGACCATTTGAACGTATGGCCAGCAGCTCACTTCATGGAGGAACAAGATTGCAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS CAA 72 bp AGGATCCATGTACTCAGGCATCCTGAAAACCCAGGTTaGAAATCCCACGGCTCTGACACCAACAGCAAGCTT +
Preference number: 6 (lower is better)
Translates to: RIHVLRHPENPG*KSHGSDTNSKL
Trigger: AAGCTTGCTGTTGGTGTCAGAGCCGTGGGATTTCAAACCTGGGTTTTCAGGATGCCTGAGTACATGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS TCA 72 bp TTTATGAAGAGGGTTCTTTCTTTCCACTTCTGGGGTTaGCACGGCGCTACAGAAGCCAAGCGACTCTTCGAT +
Preference number: 6 (lower is better)
Translates to: FMKRVLSFHFWG*HGATEAKRLFD
Trigger: ATCGAAGAGTCGCTTGGCTTCTGTAGCGCCGTGTCAACCCCAGAAGTGGAAAGAAAGAACCCTCTTCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS GCA 72 bp GCAGAGAGCGATTCGTCAAGTCAAATCCTCCAAAACTaGAGGTTCTCTGTGGAAAAGAGGGTAGGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: AESDSSSQILQN*RFSVEKRVGQK
Trigger: TTTCTGCCCTACCCTCTTTTCCACAGAGAACCTGCAGTTTTGGAGGATTTGACTTGACGAATCGCTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS CAA 72 bp GTTCTCTTGAATTGCAGTTTGATGAGCCATCAAACGTaGGGTAAGAACCATCTGGCCAGTCAGCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: VLLNCSLMSHQT*GKNHLASQQGP
Trigger: TGGACCCTGCTGACTGGCCAGATGGTTCTTACCCAACGTTTGATGGCTCATCAAACTGCAATTCAAGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367467.8
ENST00000637469.1
CDS CAA 90 bp AGCTCTGGAACAGGAATAATTAGTATCCGTTTTCTTCAAGCGGATTaGCTTCCGGACACTCTGAAACTCCTCCAGGGACACCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SSGTGIISIRFLQAD*LPDTLKLLQGHQKV
Trigger: CACCTTCTGGTGTCCCTGGAGGAGTTTCAGAGTGTCCGGAAGCAAATCCGCTTGAAGAAAACGGATACTAATTATTCCTGTTCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CCA 72 bp CATGGACCTAAAAGACACCTTCTTGGAAGGTGGTCCTaGGCAGAGGGAGAAAGACTTACTTTCTTTCCACTT +
Preference number: 6 (lower is better)
Translates to: HGPKRHLLGRWS*AEGERLTFFPL
Trigger: AAGTGGAAAGAAAGTAAGTCTTTCTCCCTCTGCCCAGGACCACCTTCCAAGAAGGTGTCTTTTAGGTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS CCA 72 bp GCTGAATCCGCTCCTCATCGCTCATCGTTATTTCACTaGCAACATAACCAACGTCTTCTCCTTTTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: AESAPHRSSLFH*QHNQRLLLLKS
Trigger: AGACTTCAAAAGGAGAAGACGTTGGTTATGTTGCCAGTGAAATAACGATGAGCGATGAGGAGCGGATTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367467.8
CDS CAA 72 bp ACAGGAATAATTAGTATCCGTTTTCTTCAAGCGGATTaGCTTCCGGACACTCTGAAACTCCTCCAGGGACAC +
Preference number: 6 (lower is better)
Translates to: TGIISIRFLQAD*LPDTLKLLQGH
Trigger: GTGTCCCTGGAGGAGTTTCAGAGTGTCCGGAAGCAAATCCGCTTGAAGAAAACGGATACTAATTATTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636279.1
CDS CAA 90 bp ATGACATCGCATAACTCCATAGTACATACGCACATGATCGCCTGTTaGATTTCCGTCAGCATGGACCTAAAAGACACCTTCTTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: MTSHNSIVHTHMIAC*ISVSMDLKDTFLEG
Trigger: ACCTTCCAAGAAGGTGTCTTTTAGGTCCATGCTGACGGAAATCAAACAGGCGATCATGTGCGTATGTACTATGGAGTTATGCGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS TCA 72 bp CACCTTTTTCCCAAGAGAGATGCGAGAGGCAGTAGGTaGTTTGATGACTTCTTTGTACACAAAGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: HLFPKRDARGSR*FDDFFVHKVSF
Trigger: GAAGGAGACTTTGTGTACAAAGAAGTCATCAAATCACCTACTGCCTCTCGCATCTCTCTTGGGAAAAAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367467.8
ENST00000622663.1
ENST00000635969.1
CDS GCA 72 bp AGTCTCCTTCTTTACCCATTGGGTCAGAATTATTACTaGCAACGTGCAGAGAGCGATTCGTCAAGTCAAATC +
Preference number: 6 (lower is better)
Translates to: SLLLYPLGQNYY*QRAESDSSSQI
Trigger: GATTTGACTTGACGAATCGCTCTCTGCACGTTGGCAGTAATAATTCTGACCCAATGGGTAAAGAAGGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367467.8
ENST00000622663.1
ENST00000636279.1
CDS CAA 72 bp CATAACTCCATAGTACATACGCACATGATCGCCTGTTaGATTTCCGTCAGCATGGACCTAAAAGACACCTTC +
Preference number: 6 (lower is better)
Translates to: HNSIVHTHMIAC*ISVSMDLKDTF
Trigger: GAAGGTGTCTTTTAGGTCCATGCTGACGGAAATCAAACAGGCGATCATGTGCGTATGTACTATGGAGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367469.5
CDS GCA 72 bp TCTTTACCCATTGGGTCAGAATTATTACTGCCAACGTaGAGAGAGCGATTCGTCAAGTCAAATCCTCCAAAA +
Preference number: 6 (lower is better)
Translates to: SLPIGSELLLPT*RERFVKSNPPK
Trigger: TTTTGGAGGATTTGACTTGACGAATCGCTCTCTGCACGTTGGCAGTAATAATTCTGACCCAATGGGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367467.8
ENST00000622663.1
ENST00000636279.1
CDS CCA 72 bp AAACTCCGCAATCTCAAAATTAAGATTAGGCACTCCTaGAACATGTCTCTCTGGAGTTACATGATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: KLRNLKIKIRHS*NMSLWSYMIRQ
Trigger: CTGCCTGATCATGTAACTCCAGAGAGACATGTTCCAGGAGTGCCTAATCTTAATTTTGAGATTGCGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637729.1
CDS TCA 72 bp TGCCACATTTGCCCAGAAAGAAAACGGTTGATTCAGTaGCTGTGTTTGACCACACTTTTTAATTTCAGTAGG +
Preference number: 6 (lower is better)
Translates to: CHICPERKRLIQ*LCLTTLFNFSR
Trigger: CCTACTGAAATTAAAAAGTGTGGTCAAACACAGTCACTGAATCAACCGTTTTCTTTCTGGGCAAATGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622663.1
CDS GCA 72 bp TATTATCCTTTTAGGTGGTTGCAAACTTCACGGAACTaGTTATATCTTAGTGATTTCTGTATTTGCAGAACT +
Preference number: 6 (lower is better)
Translates to: YYPFRWLQTSRN*LYLSDFCICRT
Trigger: AGTTCTGCAAATACAGAAATCACTAAGATATAAGCAGTTCCGTGAAGTTTGCAACCACCTAAAAGGATAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622663.1