RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SART3 (Homo sapiens)

Ensembl gene IDs: ENSG00000075856

Ensembl transcript IDs: ENST00000228284.8, ENST00000431469.6, ENST00000546611.1, ENST00000546728.5, ENST00000546808.5, ENST00000546815.6, ENST00000547397.1, ENST00000547528.5, ENST00000548077.1, ENST00000548119.1, ENST00000548582.5, ENST00000550322.5, ENST00000550619.1, ENST00000551416.1, ENST00000552221.1, ENST00000619503.4, ENST00000651280.1

Found 972 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTC +
Preference number: 1 (lower is better)
Translates to: CEHAAHQACPSPVHC*VVGGPPGQSEVRHF
Trigger: GAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR CCA 90 bp GAAACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGGCCGTTCT +
Preference number: 1 (lower is better)
Translates to: ETAWQNRHWTSWVPR*LLGRQLQEPRQGRS
Trigger: AGAACGGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp GCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGGGAGGCTaGCTTCTCCTTCTGCTTCGAAGGGGGCTCCACATCTACGGCAGC +
Preference number: 1 (lower is better)
Translates to: AAVVQHLGHVPLQGG*LLLLLRRGLHIYGS
Trigger: GCTGCCGTAGATGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGCCTCCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp GCGTCCTTCCCTTCCCCCTCGCTCCGTATGTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCCTGGTCTCCGGCTTCTCTGGAACTT +
Preference number: 1 (lower is better)
Translates to: ASFPSPSLRMSAAKA*GHLVPSWSPASLEL
Trigger: AAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAGGGGGAAGGGAAGGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 90 bp ATCCCCAGTGCACTGCTGGGTGGTGGGAGGTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGTTCACTTTCTC +
Preference number: 1 (lower is better)
Translates to: IPSALLGGGRSAGPE*SKAFPVSQRPVHFL
Trigger: GAGAAAGTGAACGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp CTTTCTCAGAAACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGG +
Preference number: 1 (lower is better)
Translates to: LSQKQLGKIGIGHLG*LGGCWGGNCRSRGR
Trigger: CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp AGCACCTTGGGCATGTCCCTCTTCAGGGAGGCTGCCTTCTCCTTCTaGTTCGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCG +
Preference number: 1 (lower is better)
Translates to: STLGMSLFREAAFSF*FEGGSTSTAAHFPA
Trigger: CGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGCCTCCCTGAAGAGGGACATGCCCAAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCCCTCTTCAGGGAGGCTGCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GRLLTKTVMLSLLLS*STLGMSLFREAAFS
Trigger: GGAGAAGGCAGCCTCCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp TTCACTTTCTCAGAAACAGCTTGGCAAAATCGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGG +
Preference number: 1 (lower is better)
Translates to: FTFSETAWQNRHWTS*VPRWLLGRQLQEPR
Trigger: CCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp AGCGTCCCGTTCACTTTCTCAGAAACAGCTTGGCAAAATCGGCATTaGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAG +
Preference number: 1 (lower is better)
Translates to: SVPFTFSETAWQNRH*TSWVPRWLLGRQLQ
Trigger: CTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp CGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTGTGTTTCTCCAGCTGCAGGGATGCT +
Preference number: 1 (lower is better)
Translates to: RRGLHIYGSTFPSGP*CYFYILCFSSCRDA
Trigger: AGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp AGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGTTTCTCCAGCTGCAGGGATGCTGTT +
Preference number: 1 (lower is better)
Translates to: RGLHIYGSTFPSGPC*YFYILCFSSCRDAV
Trigger: AACAGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp CAAAAGCATGGGGCCACCTGGTGCCTTCCTGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGGGTTGCTGATTGCCACTTTGATGAT +
Preference number: 1 (lower is better)
Translates to: QKHGATWCLPGLRLL*NFPLRRVADCHFDD
Trigger: ATCATCAAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp CATTTCCTGTCTCCCAGCGTCCCGTTCACTTTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: HFLSPSVPFTFSETA*QNRHWTSWVPRWLL
Trigger: CAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCTGGGAGACAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 90 bp GGTCACTGCCTAGGCTTGCATCCTGCTCTGGACGCCTTGCTCCAGTaGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: GHCLGLHPALDALLQ*NHSDYHKEQHILAF
Trigger: AAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR CCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTaGATCACCACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAG +
Preference number: 1 (lower is better)
Translates to: QSSLNPSPVLHNHAA*ITTLIETLFHLLLQ
Trigger: CTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 90 bp ACAGGGTCGTGGCGAGGATTCAATGAGATAACGTTTGCAAGGCAATaGGCAGGCAGTAAGCACTCAAATCCGACAGGAGCTACTGTCACG +
Preference number: 1 (lower is better)
Translates to: TGSWRGFNEITFARQ*AGSKHSNPTGATVT
Trigger: CGTGACAGTAGCTCCTGTCGGATTTGAGTGCTTACTGCCTGCCCATTGCCTTGCAAACGTTATCTCATTGAATCCTCGCCACGACCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR CCA 90 bp TGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTaGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAG +
Preference number: 1 (lower is better)
Translates to: CYLLLIPNQRTAQLM*IIARAVDWHTHGYE
Trigger: CTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR TCA 90 bp TTGCCAGCCCGGTTGGTGACCAGCCTGAGGTCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCTAGTTCCTCTTTAGTACAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: LPARLVTSLRSFTVP*ALQISSSSSLVQEK
Trigger: TTTCTCCTGTACTAAAGAGGAACTAGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGACCTCAGGCTGGTCACCAACCGGGCTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 90 bp AGGCTTGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTaGTTACCACAAGGAACAGCACATCTTGGCTTTTCTGTCCTAACA +
Preference number: 1 (lower is better)
Translates to: RLASCSGRLAPVEPQ*LPQGTAHLGFSVLT
Trigger: TGTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR GCA 90 bp GCATTTCCTCTGGTCATGATGCTATCCCAGAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGC +
Preference number: 1 (lower is better)
Translates to: AFPLVMMLSQSSRAF*MLLHSRASILAQFC
Trigger: GCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATCATGACCAGAGGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 90 bp GCCCTGCTGCTACTTCTACATTTTGTGTTTCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGCGTTTGGAAGGCTGCTCTTCTTCAT +
Preference number: 1 (lower is better)
Translates to: ALLLLLHFVFLQLQG*CSRPFCVWKAALLH
Trigger: ATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 90 bp CCTCCCTTCTACACTTTTCCGGTCCATCTCCAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTCCACGTAGCAGTAACCTCGGAAATC +
Preference number: 1 (lower is better)
Translates to: PPFYTFPVHLQCLKG*FLFFKLHVAVTSEI
Trigger: GATTTCCGAGGTTACTGCTACGTGGAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTGGAGATGGACCGGAAAAGTGTAGAAGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 90 bp GGAGTCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATAATCAGTGGCCTGGATGAAGCCGGC +
Preference number: 1 (lower is better)
Translates to: GVLFEINPSPQVIKV*LPNLHIISGLDEAG
Trigger: GCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 90 bp AGGATCGCCAATTTTCATCTCAAAATCGATATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGCCTGCAACTCTCGGGAGAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: RIANFHLKIDICLIF*QPWCLCLQLSGEGG
Trigger: TCCTCCCTCTCCCGAGAGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATTGGCGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547528.5
3UTR CCA 90 bp CGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGT +
Preference number: 1 (lower is better)
Translates to: RRLQKLLDDQLHVSP*PRGTDSIRQLSRGS
Trigger: ACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR TCA 90 bp TCTGGGACAAGGCAGTTCTCGACCAGGGCGCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCAATTTTCATCTCAAAATCGATATAT +
Preference number: 1 (lower is better)
Translates to: SGTRQFSTRARSKIN*MRAGSPIFISKSIY
Trigger: ATATATCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTGGTCGAGAACTGCCTTGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR GCA 90 bp GGACAAGGCAGTTCTCGACCAGGGCGCGCTCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTTTCATCTCAAAATCGATATATGCTT +
Preference number: 1 (lower is better)
Translates to: GQGSSRPGRAQRSTE*EQDRQFSSQNRYML
Trigger: AAGCATATATCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTGGTCGAGAACTGCCTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR TCA 90 bp AATACTCTAGCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATaGTGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACA +
Preference number: 1 (lower is better)
Translates to: NTLATCWRTWHFLWS*CYPRVPELSACYCT
Trigger: TGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 90 bp TGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATCTTaGCTTTTCTGTCCTAACAGGAAGCTAATTCATCCCGGGTTAATC +
Preference number: 1 (lower is better)
Translates to: CSSGTTVITTRNSTS*LFCPNRKLIHPGLI
Trigger: GATTAACCCGGGATGAATTAGCTTCCTGTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR TCA 90 bp GAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTaGGCAAGAAACTTTCCTCCACGAGCCTCAGTTTCCTCCAGTAAA +
Preference number: 1 (lower is better)
Translates to: EWDQSTRPDLQEVLS*ARNFPPRASVSSSK
Trigger: TTTACTGGAGGAAACTGAGGCTCGTGGAGGAAAGTTTCTTGCTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR GCA 90 bp AGGATCGCCAATTTTCATCTCAAAATCGATATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGCCTGCAACAGTGCTTCTTCATAGGG +
Preference number: 1 (lower is better)
Translates to: RIANFHLKIDICLIF*QPWCLCLQQCFFIG
Trigger: CCCTATGAAGAAGCACTGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATTGGCGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR TCA 90 bp AATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTT +
Preference number: 1 (lower is better)
Translates to: NQGMPAKSPHNQWPG*SRHSKLSRRLQKLL
Trigger: AAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR TCA 90 bp CAGATAAATGAGGAGTTGATTCCCACGACATATACAAGGATTCCCTaGCGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTAC +
Preference number: 1 (lower is better)
Translates to: QINEELIPTTYTRIP*RLSPECLNKASFPY
Trigger: GTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTCAGGGAATCCTTGTATATGTCGTGGGAATCAACTCCTCATTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR TCA 90 bp TTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCTTCTAAAGAACCTTCTGTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: FILCSLTRANRVSVF*TAISQSSKEPSVLS
Trigger: GGAGAGGACAGAAGGTTCTTTAGAAGATTGGGATATAGCTGTTCAGAAAACTGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 90 bp AATAACACTCTCTTGCGAATGAGTTTATTTCTACTGTTGGACGTGTaGTTAAGAGTGGGAGTTCTGGAATGGGATCAAAGTACAAGGCCT +
Preference number: 1 (lower is better)
Translates to: NNTLLRMSLFLLLDV*LRVGVLEWDQSTRP
Trigger: AGGCCTTGTACTTTGATCCCATTCCAGAACTCCCACTCTTAACCACACGTCCAACAGTAGAAATAAACTCATTCGCAAGAGAGTGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR-3UTR CCA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGTGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGGCCGTTCTTGTCGTGCAGCACCTTaGGCATGTCCCTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: VPRWLLGRQLQEPRQGRSCRAAP*ACPSSG
Trigger: CCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACA...AGAACGGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 2 (lower is better)
Translates to: LDILGASVAAGAATAGAAGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...CGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACTCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 2 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGTGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp AAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: KRYRLHKATVQGQFLIARQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...CCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 2 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp TTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: LDILGASVAAGAATAGAANAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...CGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: FVFLQLQGCCSRPFCVWKHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...CTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCAATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTTGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 2 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCAACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 2 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CAA 90 bp CAGCGTCCCGTTCACTTTCTCAGAAACAGCTTGGCAAAATCGGCATaGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCA +
Preference number: 2 (lower is better)
Translates to: QRPVHFLRNSLAKSA*DILGASVAAGAATA
Trigger: TGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATCTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 2 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHLSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 2 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITLGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 2 (lower is better)
Translates to: EVSYKKGPELARNIWTTVSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp TCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCTGACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 2 (lower is better)
Translates to: SPQASKSGLSFVSGSCMLTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...CAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp TCGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTATGCTCCGCGCTTCTCTaGGCCTCTGATCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SKGAPHLRQHISQRALLLCSALL*ASDLFL
Trigger: AAGAAAAAGATCAGAGGCCCAGAGAAGCGCGGAGCA...TAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCAGGAGCTGCAGCACTTaGGCGCTGCAGGGCACGAGG +
Preference number: 2 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGRSCST*ALQGTR
Trigger: CCTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCT...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CAA 90 bp CCAGGCAGAGGTCACTGCCTAGGCTTGCATCCTGCTCTGGACGCCTaGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATC +
Preference number: 2 (lower is better)
Translates to: PGRGHCLGLHPALDA*LQWNHSDYHKEQHI
Trigger: GATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACCTCTGCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR TCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 2 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 2 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 2 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 2 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CAA 90 bp TACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCG +
Preference number: 2 (lower is better)
Translates to: YGSTFPSGPCCYFYI*CFSSCRDAVLDPSA
Trigger: CGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: KPRSHLWLRARSTPGLSINAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 2 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR TCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTATACAAGGATTCCCTaGCGTCTTTCTCCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPYTRIP*RLSPEC
Trigger: ACACTCTGGAGAAAGACGTCAGGGAATCCTTGTATA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR-3UTR GCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: NAFFSARALFRCSAFSSSHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TGCTGTTCTCGACCCTTCTGCGTTTGGAAGGCTGCTCTTCTTCATCATCGCCCCCAGCCTTGGTGCCTCTaGCTGCAACAGTGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: CCSRPFCVWKAALLHHRPQPWCL*LQQCFF
Trigger: GAAGAAGCACTGTTGCAGGCAGAGGCACCAAGGCTG...GGGGCGATGATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: EVSYKKGPELARNIWTTVQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCTCTGGGTAGTCACTaGTGCACTGGACGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: IADFPQTHPHKRPFCELLALGSH*CTGRPG
Trigger: ACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGC...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CAA 90 bp GCATTTCCTGTCTCCCAGCGTCCCGTTCACTTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: AFPVSQRPVHFLRNS*AKSALDILGASVAA
Trigger: AGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCTGGGAGACAGGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CAA 90 bp ACAAGTGTAAATTGGCCAGTACCAGGCAGAGGTCACTGCCTAGGCTaGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: TSVNWPVPGRGHCLG*HPALDALLQWNHSD
Trigger: ATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACCTCTGCCTGGTACTGGCCAATTTACACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR TCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: LHSRASILAQFCIITQLGSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCCCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: RASILAQFCIITQLGSPLPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...GAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TCGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 2 (lower is better)
Translates to: SKGAPHLRQHISQRALLLQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...TAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR CCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 2 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: SYKKGPELARNIWTTVSQQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 2 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp AACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 2 (lower is better)
Translates to: NSLAKSALDILGASVAAGTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...CCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGACCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LHSRASILAQFCIITQLGPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: GRLLTKTVMLSLLLSCSTQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp GGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: GTSKGGPQLLQLFTGVLFRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...AAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 2 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 2 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: KPRSHLWLRARSTPGLSILARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGGLRLL*NFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACC...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp GACGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTGAACTGGCCTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: DVFLQSVLIKQASPTELASAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...GGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR-3UTR TCA 90 bp TTTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 2 (lower is better)
Translates to: FVFLQLQGCCSRPFCVWKLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...CTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 2 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 2 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTACGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: IADFPQTHPHKRPFCELLRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCACGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: QTHPHKRPFCELLASAISRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 2 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAAGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp TTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCATCGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: FGRLLFFIIAPLFLIILIAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...GATGAGGATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTAGCCACATGTTGGCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 2 (lower is better)
Translates to: AGCHHELFPGCNTLATCWLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...CCAACATGTGGCTAGAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 2 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: NAFFSARALFRCSAFSSSSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 2 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 2 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp CTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTCTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 2 (lower is better)
Translates to: LHIYGSTFPSGPCCYFYILSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...AATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCTGTTCTCGACCCTTCTaGGTTTGGAAGGCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGCSRPF*VWKAAL
Trigger: AAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACA...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp CCACACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 2 (lower is better)
Translates to: PHRGKQTLASLLHFSGPSFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...AGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 2 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCGGAAACATGAAACAATaGCTGACATGTCATTTACAA +
Preference number: 2 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIGNMKQ*LTCHLQ
Trigger: TTGTAAATGACATGTCAGCCATTGTTTCATGTTTCC...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp TCTAGCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATGATGCTATCCCAGAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: SSHMLAYLAFPLVMMLSQNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...CTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp TCTAGCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATGATGCTATCCCAGGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: SSHMLAYLAFPLVMMLSQDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...CTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGTCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: FVFLQLQGCCSRPFCVWKSLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...CTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp GGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCAACCCTATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: GGPQLLQLFTGVLFEINPILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...AGGGTTGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp GGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 2 (lower is better)
Translates to: GTSKGGPQLLQLFTGVLFSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...AAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp CTCTGGAACTTTCCTCTGAGGAGGGTTGCTGATTGCCACTTTGATGATGTTCTCCCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGT +
Preference number: 2 (lower is better)
Translates to: LWNFPLRRVADCHFDDVLPSGPC*YFYILC
Trigger: ACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGG...GAGAACATCATCAAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCTCTGCCTGCAACAGTaGTTCTTCATAGGGTTTATA +
Preference number: 2 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGLCLQQ*FFIGFI
Trigger: TATAAACCCTATGAAGAAGCACTGTTGCAGGCAGAG...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR CCA 90 bp ATGTGGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAGATTTCTGACGCCTTGCTCCAGTaGAACCACAGTGATTACCAC +
Preference number: 2 (lower is better)
Translates to: MWIIARAVDWHTHGYEISDALLQ*NHSDYH
Trigger: GTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTC...AGAAATCTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR TCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 2 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGA +
Preference number: 2 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFNPHGC*RWVGSG
Trigger: TCCAGATCCGACCCATCTTCAGCAACCGTGGGGATT...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TCACTAGGCAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 2 (lower is better)
Translates to: SLGKENSPQQVAQIIPIQGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...TTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTGCCTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: QTHPHKRPFCELLASAISSLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTAGCCAGGACGAAGTTTaGACTAGTCTACCATGCAAG +
Preference number: 2 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCSQDEV*TSLPCK
Trigger: CTTGCATGGTAGACTAGTGCAAACTTCGTCCTGGCT...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAATGCTCCGCGCTTCTCTaGGCCTCTGATCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SYKKGPELARNIWTTVSQCSALL*ASDLFL
Trigger: AAGAAAAAGATCAGAGGCCCAGAGAAGCGCGGAGCA...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCGCACTGAAAGGCTCTTaGCTTAGAACCCCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLALKGS*LRTPSP
Trigger: AGGGGAAGGGGTTCTAAGTCAAGAGCCTTTCAGTGC...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp TCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: STSTAAHFPAGPAATSTFLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...AAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 2 (lower is better)
Translates to: SYKKGPELARNIWTTVSQEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 2 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR GCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: SYKKGPELARNIWTTVSQICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR GCA 90 bp TTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 2 (lower is better)
Translates to: LKRSSTSCFRYSKARVKAQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...CGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp GAAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: EAGIQSFLEGYRNYLMINAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...GTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 2 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CTCTGGAACTTTCCTCTGAGGAGGGTTGCTGATTGCCACTTTGATGATGTTCTCAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: LWNFPLRRVADCHFDDVLNAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...GAGAACATCATCAAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CAGGAGAAAGGCAGGCCTGAGATGAACAGCTTGTGTTTCTCTAGGGAAGTGCTGACAAAACCAAAGGGCTaGAACTCATGTTTAGACAAC +
Preference number: 2 (lower is better)
Translates to: QEKGRPEMNSLCFSREVLTKPKG*NSCLDN
Trigger: GTTGTCTAAACATGAGTTTCAGCCCTTTGGTTTTGT...CAGCACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTC +
Preference number: 2 (lower is better)
Translates to: SYKKGPELARNIWTTVSQQCLKG*FLFFKL
Trigger: GAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGAAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: LHSRASILAQFCIITQLGKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 2 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CTTAAACTTACGCAACAGATAAATGAGGAGTTGATTCCCACGACATATACAAGGCCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LKLTQQINEELIPTTYTRPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...CCTTGTATATGTCGTGGGAATCAACTCCTCATTTATCTGTTGCGTAAGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR-3UTR TCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: NAFFSARALFRCSAFSSSQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 2 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR GCA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAACAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 2 (lower is better)
Translates to: LIETLFHLLLQILQGTSKQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCACTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: QTHPHKRPFCELLASAISLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAAAAGGGGCCGGAGCTaGCCAGAAACATTTGGACAA +
Preference number: 2 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLKRGRS*PETFGQ
Trigger: TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTT...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp TTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCATCCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 2 (lower is better)
Translates to: FGRLLFFIIAPLFLIILIHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...GATGAGGATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTATCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 2 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp ATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTGAGCAAGAAACTTTCGTGGCGAGGATTCAATaGGATAACGTTTGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: IKVQGLTCRKCYLEQETFVARIQ*DNVCKA
Trigger: TGCCTTGCAAACGTTATCTCATTGAATCCTCGCCAC...GAAAGTTTCTTGCTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR-3UTR GCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR TCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp ACTGGAGTCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATGCCTGAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: TGVLFEINPSPQVIKVCLKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...CAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR TCA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 2 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR TCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 2 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CCA 90 bp GTCGAGAGGGTGAGAGAAATTAAGAAATTCTTACAAGCACATACAAGAGTTGAAGTGGGAGTTCTGGAATaGGATCAAAGTACAAGGCCT +
Preference number: 2 (lower is better)
Translates to: VERVREIKKFLQAHTRVEVGVLE*DQSTRP
Trigger: AGGCCTTGTACTTTGATCCCATTCCAGAACTCCCAC...TTCAACTCTTGTATGTGCTTGTAAGAATTTCTTAATTTCTCTCACCCTCTCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR-3UTR GCA 90 bp CAGATAAAACCAAATCCTTTACTTTCAGTTGTCGATCTAGGTACTGACTGTAACCTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: QIKPNPLLSVVDLGTDCNLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...GTTACAGTCAGTACCTAGATCGACAACTGAAAGTAAAGGATTTGGTTTTATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTaGAGGAGCCGCGGCAGGGCCGTTCTCAGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: HLGCLGGCWGGN*RSRGRAVLSLR
Trigger: CCTCAGGCTGAGAACGGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp ATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCTaGGGCGGCAACTGCAGGAGCCGCGGCAGGGCCGTT +
Preference number: 3 (lower is better)
Translates to: IGIGHLGCLGGC*GGNCRSRGRAV
Trigger: AACGGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp CTTGGGCGCTGCAGGGCACGAGGCAGTAGAGACAGCTaGGTCCTTCCCTTCCCCCTCGCTCCGTATGTCTGC +
Preference number: 3 (lower is better)
Translates to: LGRCRARGSRDS*VLPFPLAPYVC
Trigger: GCAGACATACGGAGCGAGGGGGAAGGGAAGGACGCAGCTGTCTCTACTGCCTCGTGCCCTGCAGCGCCCAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp TGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAG +
Preference number: 3 (lower is better)
Translates to: WQNRHWTSWVPR*LLGRQLQEPRQ
Trigger: CTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 72 bp TCTGGACCACCTCCCCACAGGCCTCGAAGAGTGGCCTaGGCTTCGTGTCCGGCTCCTGCATGCTGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: SGPPPHRPRRVA*ASCPAPACCRA
Trigger: TGCCCTACAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGAGGTGGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 72 bp GCACTGCTGGGTGGTGGGAGGTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGTT +
Preference number: 3 (lower is better)
Translates to: ALLGGGRSAGPE*SKAFPVSQRPV
Trigger: AACGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp CCTTCCCCCTCGCTCCGTATGTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCCTGGTCTCCGGCTTCT +
Preference number: 3 (lower is better)
Translates to: PSPSLRMSAAKA*GHLVPSWSPAS
Trigger: AGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAGGGGGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: LDILGASVAAGAATAGAAGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...CGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp GTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGGCCGTTCTTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: VPRWLLGRQLQEPRQGRSCYFYI*CFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCA...AGAACGGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCAGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACT +
Preference number: 3 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSDILPA*VPLPAT
Trigger: AGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547528.5
3UTR GCA 72 bp GTAACACTTCGCAGACGTGCTCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGT +
Preference number: 3 (lower is better)
Translates to: VTLRRRALGSHW*TGRPGAEPSGS
Trigger: ACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAAGTGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 72 bp CGGAAATCCCCACGGTTGCTGAAGATGGGTCGGATCTaGACCACCTCCCCACAGGCCTCGAAGAGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: RKSPRLLKMGRI*TTSPQASKSGL
Trigger: CAGGCCACTCTTCGAGGCCTGTGGGGAGGTGGTCCAGATCCGACCCATCTTCAGCAACCGTGGGGATTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: GRLLTKTVMLSLLLSCSTRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 72 bp CCACGTAGCAGTAACCTCGGAAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGACCACCTCCCCACAGG +
Preference number: 3 (lower is better)
Translates to: PRSSNLGNPHGC*RWVGSGPPPHR
Trigger: CCTGTGGGGAGGTGGTCCAGATCCGACCCATCTTCAGCAACCGTGGGGATTTCCGAGGTTACTGCTACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp AAACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGC +
Preference number: 3 (lower is better)
Translates to: KQLGKIGIGHLG*LGGCWGGNCRS
Trigger: GCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp CGCTCCGTATGTCTGCGGCAAAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGGCTTCTCTGGAACTTT +
Preference number: 3 (lower is better)
Translates to: RSVCLRQKHGAT*CLPGLRLLWNF
Trigger: AAAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CAA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGTTGCTGATTGCCACTTaGATGATGTTCTCTTTGATA +
Preference number: 3 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRLLIAT*MMFSLI
Trigger: TATCAAAGAGAACATCATCAAAGTGGCAATCAGCAA...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp ATGGGGATAGATAACAGGGCTTCCTTCACAGGGTCGTGGCGAGGATTCAATGAGAGCGGGTTTGCAGCCTaGGCGGCTTTATCGCCGCCG +
Preference number: 3 (lower is better)
Translates to: MGIDNRASFTGSWRGFNESGFAA*AALSPP
Trigger: CGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCT...CTCATTGAATCCTCGCCACGACCCTGTGAAGGAAGCCCTGTTATCTATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR GCA 72 bp CTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCCCTCTTCAGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: LTKTVMLSLLLS*STLGMSLFREA
Trigger: AGCCTCCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp TCAGAAACAGCTTGGCAAAATCGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAG +
Preference number: 3 (lower is better)
Translates to: SETAWQNRHWTS*VPRWLLGRQLQ
Trigger: CTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp GCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: AKRYRLHKATVQGQFLIARSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...CGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTCTGTCGTGCAGCACCTaGGGCATGTCCCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: STSTAAHFPAGPAATSTFLSCST*GMSLFR
Trigger: CCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAG...AAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp CCACACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTACGGTGATGCTGTCCTaGCTGCTGTCGTGCAGCACC +
Preference number: 3 (lower is better)
Translates to: PHRGKQTLASLLHFSGPSTVMLS*LLSCST
Trigger: GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGT...AGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp ACAAGTGTAAATTGGCCAGTACCAGGCAGAGGTCACTaGCTAGGCTTGCATCCTGCTCTGGACGCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: TSVNWPVPGRGH*LGLHPALDALL
Trigger: GAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACCTCTGCCTGGTACTGGCCAATTTACACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR CCA 72 bp CAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTaGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTT +
Preference number: 3 (lower is better)
Translates to: QLQGCCSRPFCV*KAALLHHRPTL
Trigger: AAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: IADFPQTHPHKRPFCELLRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CAA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp GGATCACCACTCTCATTGAAACGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCACGAGTAAAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: GSPLSLKRSSTS*FRYSKARVKAA
Trigger: GGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp CACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGTTTCTCCAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: HIYGSTFPSGPC*YFYILCFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp CTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTGTGTTTCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: LHIYGSTFPSGP*CYFYILCFSSC
Trigger: GCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp TCTCCCAGCGTCCCGTTCACTTTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACATCTTGGGTGCCTCGG +
Preference number: 3 (lower is better)
Translates to: SPSVPFTFSETA*QNRHWTSWVPR
Trigger: CCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp CTAGGCTTGCATCCTGCTCTGGACGCCTTGCTCCAGTaGAACCACAGTGATTACCACAAGGAACAGCACATC +
Preference number: 3 (lower is better)
Translates to: LGLHPALDALLQ*NHSDYHKEQHI
Trigger: GATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR CAA 90 bp TCTCCTTCTGCTTCGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 3 (lower is better)
Translates to: SPSASKGAPHLRQHISQRFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...CCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCGAAGCAGAAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCAGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 3 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp CTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTaGATCATAGCTAGGGCCGTAGACTGGCACACACAT +
Preference number: 3 (lower is better)
Translates to: LLIPNQRTAQLM*IIARAVDWHTH
Trigger: ATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR CAA 90 bp CTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: LSLKRSSTSCFRYSKARVGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...TACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGACACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 3 (lower is better)
Translates to: LHSRASILAQFCIITQLGHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCCTTCTCTGCAGCCTTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCAGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: SFSAAFILCSLTRANRVSDILPA*VPLPAT
Trigger: TGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...TGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAAGGCTGCAGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR TCA 72 bp GCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATaGTGCTATCCCAGAGTTCCCGAGCTTTCTGCATGT +
Preference number: 3 (lower is better)
Translates to: ATCWRTWHFLWS*CYPRVPELSAC
Trigger: ACATGCAGAAAGCTCGGGAACTCTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR TCA 72 bp TCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTaGTTACCACAAGGAACAGCACATCTTGGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SCSGRLAPVEPQ*LPQGTAHLGFS
Trigger: AGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR GCA 72 bp CTGGTCATGATGCTATCCCAGAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGAGCCTCAATCCTAGCC +
Preference number: 3 (lower is better)
Translates to: LVMMLSQSSRAF*MLLHSRASILA
Trigger: GGCTAGGATTGAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATCATGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp AAAATCGATATATGCTTGATATTCTGCCAGCCTTGGTaGCTCTGCCTGCAACTCTCGGGAGAGGGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: KIDICLIFCQPW*LCLQLSGEGGG
Trigger: TCCTCCTCCCTCTCCCGAGAGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547528.5
3UTR CCA 72 bp AGTGTGACTATCACCTCTCAGACCTCACCAGTCACCTaGCAATTCTGCTATCTCCTCCTCATCCCAAACCAG +
Preference number: 3 (lower is better)
Translates to: SVTITSQTSPVT*QFCYLLLIPNQ
Trigger: CTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCCAGGTGACTGGTGAGGTCTGAGAGGTGATAGTCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR-3UTR CAA 90 bp CTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTGTGTTTTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 3 (lower is better)
Translates to: LRQHISQRALLLLLHFVFYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...AAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR TCA 72 bp CCCAATCTTCTAAAGAACCTTCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGTGCTCTGGGTAGTCAC +
Preference number: 3 (lower is better)
Translates to: PNLLKNLLSSPW*VTLRRRALGSH
Trigger: GTGACTACCCAGAGCACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAGAAGGTTCTTTAGAAGATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR TCA 72 bp AGGCAGTTCTCGACCAGGGCGCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCAATTTTCATCTCAAAA +
Preference number: 3 (lower is better)
Translates to: RQFSTRARSKIN*MRAGSPIFISK
Trigger: TTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTGGTCGAGAACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp CTACTTCTACATTTTGTGTTTCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGCGTTTGGAAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: LLLHFVFLQLQG*CSRPFCVWKAA
Trigger: AGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CCA 72 bp CTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTaGATCACCACTCTCATTGAAACGCTCTTCCACCTC +
Preference number: 3 (lower is better)
Translates to: LNPSPVLHNHAA*ITTLIETLFHL
Trigger: GAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 72 bp TGGCGAGGATTCAATGAGATAACGTTTGCAAGGCAATaGGCAGGCAGTAAGCACTCAAATCCGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: WRGFNEITFARQ*AGSKHSNPTGA
Trigger: AGCTCCTGTCGGATTTGAGTGCTTACTGCCTGCCCATTGCCTTGCAAACGTTATCTCATTGAATCCTCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR CCA 72 bp CTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTGGAATaGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: LLDVWLRVGVLE*DQSTRPDLQEV
Trigger: CACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCCCACTCTTAACCACACGTCCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR-3UTR CAA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAGCTTTCTGCATGTTATaGCACAGTCGAGCCTCAATC +
Preference number: 3 (lower is better)
Translates to: QTHPHKRPFCELLASAISAFCML*HSRASI
Trigger: GATTGAGGCTCGACTGTGCAATAACATGCAGAAAGC...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp ACTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTGGAATGGGATCAAAGTACAAGTCACGAAAAGCGGGTTaGCAGCCTTGGCGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: TVGRVVKSGSSGMGSKYKSRKAG*QPWRLY
Trigger: ATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGA...CTTGTACTTTGATCCCATTCCAGAACTCCCACTCTTAACCACACGTCCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR TCA 72 bp ATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAG +
Preference number: 3 (lower is better)
Translates to: MPAKSPHNQWPG*SRHSKLSRRLQ
Trigger: CTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp AGTTCTCGACCAGGGCGCGCTCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTTTCATCTCAAAATCGA +
Preference number: 3 (lower is better)
Translates to: SSRPGRAQRSTE*EQDRQFSSQNR
Trigger: TCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTGGTCGAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
3UTR CCA 72 bp ATGGGGATAGATAACAGGGCTTCCTTCACAGGGTCGTaGCGAGGATTCAATGAGATAACGTTTGCAAGGCAA +
Preference number: 3 (lower is better)
Translates to: MGIDNRASFTGS*RGFNEITFARQ
Trigger: TTGCCTTGCAAACGTTATCTCATTGAATCCTCGCCACGACCCTGTGAAGGAAGCCCTGTTATCTATCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR-3UTR CAA 90 bp TCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCAATCCTATTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SQSSRAFCMLLHSRASILLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...TAGGATTGAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR CCA 72 bp CAGAAATTACTTGATGATCAACTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCCATAAGGCAACTGTCC +
Preference number: 3 (lower is better)
Translates to: QKLLDDQLHVSP*PRGTDSIRQLS
Trigger: GGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 3 (lower is better)
Translates to: SSLNPSPVLHNHAAWITTGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...AGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp ATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATACTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 3 (lower is better)
Translates to: MAKRYRLHKATVQGQFLILFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...TATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTGGCCAGAAACATTaGGACAACTGTGTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFAGQKH*DNCVSK
Trigger: TTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 3 (lower is better)
Translates to: SYKKGPELARNIWTTVSQLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACAGATAAATGAGGAGTaGATTCCCACGACATATACA +
Preference number: 3 (lower is better)
Translates to: SYKKGPELARNIWTTVSQQINEE*IPTTYT
Trigger: TGTATATGTCGTGGGAATCAACTCCTCATTTATCTG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR TCA 72 bp AGTGGGAGTTCTGGAATGGGATCAAAGTACAAGGCCTaGCTTGCAGGAAGTGTTATCTTGAGCAAGAAACTT +
Preference number: 3 (lower is better)
Translates to: SGSSGMGSKYKA*LAGSVILSKKL
Trigger: AAGTTTCTTGCTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR TCA 72 bp TCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTaGACTGGCCAATGCTGTTGCTGTTTTCAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: SPECLNKASFPY*TGQCCCCFQSS
Trigger: ACTGCTTTGAAAACAGCAACAGCATTGGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR TCA 72 bp GAGGAGTTGATTCCCACGACATATACAAGGATTCCCTaGCGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: EELIPTTYTRIP*RLSPECLNKAS
Trigger: GCTTGCTTTATTAAGACACTCTGGAGAAAGACGTCAGGGAATCCTTGTATATGTCGTGGGAATCAACTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546815.6
3UTR GCA 72 bp TTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATAATCAGTGGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: FEINPSPQVIKV*LPNLHIISGLD
Trigger: ATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR GCA 72 bp GAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTaGAGGAAGTGTTATCTTGAGCAAGAAACTTTCCTC +
Preference number: 3 (lower is better)
Translates to: EFWNGIKVQGLT*RKCYLEQETFL
Trigger: GAGGAAAGTTTCTTGCTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR GCA 72 bp AATTTTCATCTCAAAATCGATATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGCCTGCAACTCTCGGGA +
Preference number: 3 (lower is better)
Translates to: NFHLKIDICLIF*QPWCLCLQLSG
Trigger: TCCCGAGAGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547528.5
3UTR-3UTR CAA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 3 (lower is better)
Translates to: SYKKGPELARNIWTTVSQGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR GCA 72 bp AATTTTCATCTCAAAATCGATATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGCCTGCAACAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: NFHLKIDICLIF*QPWCLCLQQCF
Trigger: GAAGCACTGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651280.1
3UTR-3UTR CAA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAAATGCACAGCCCCATaGAACAAAACTCCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLKCTAP*NKTPAN
Trigger: ATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATTT...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
3UTR-3UTR CAA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTAAATGGGGAGAATaGAAGTTTGCATTTGACATG +
Preference number: 3 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFAKWGE*KFAFDM
Trigger: CATGTCAAATGCAAACTTCAATTCTCCCCATTTAGC...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR TCA 72 bp TGCTCATTGACACGAGCTAATCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCTTCTAAAGAACCTTCT +
Preference number: 3 (lower is better)
Translates to: CSLTRANRVSVF*TAISQSSKEPS
Trigger: AGAAGGTTCTTTAGAAGATTGGGATATAGCTGTTCAGAAAACTGAAACCCGATTAGCTCGTGTCAATGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
3UTR-3UTR CAA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 3 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGGGGTGCCTCGGTGGCTaGTGGGGCGGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPGCLGG*WGGNCR
Trigger: CCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCC...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRSAAKA*GHLVPS
Trigger: GGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGA...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCAGGGCCGTTCTCAGCCTaGGGAGCTGCAGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSGPFSA*GAAALG
Trigger: CCCAAGTGCTGCAGCTCCTCAGGCTGAGAACGGCCC...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGCTCATCATCCTCATCTaGTCCGCGCTTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRLIILI*SALLWA
Trigger: GGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAG...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGCTCGCTCCGTATGTCTaGGGCAAAAGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRLAPYV*GKSMGP
Trigger: TGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAG...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGGGGCCGTTCTCAGCCTaGGGAGCTGCAGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPGPFSA*GAAALG
Trigger: CCCAAGTGCTGCAGCTCCTCAGGCTGAGAACGGCCC...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGAEPSGSAGCHHELFPGHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...ACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGCCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTGCCTCGGTGGCTGCTaGGGCGGCAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPCLGGC*GGNCRS
Trigger: GCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCTGCCTCGGTGGCTGCTaGGGCGGCAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSCLGGC*GGNCRS
Trigger: GCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCA...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGTCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPSWVPR*LLGRQL
Trigger: CAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGA...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTTGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAG +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRSRPPF*PIPPTE
Trigger: CTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGA...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCTGCCTTCTCCTTCTaGTTCGAAGGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LDILGASVAAGAATAGAAAAFSF*FEGGST
Trigger: TGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGC...CGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGCCTTGGGCCCAGCCTTaGACTCAGCCTCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPPWAQP*TQPRVL
Trigger: CAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGG...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCTCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: KPRSHLWLRARSTPGLSISWVPR*LLGRQL
Trigger: CAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGA...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GDAVLAAVVQHLGHVPLQQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...CTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCCTCGAAGAGTGGCCTaGGCTTCGTGTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSPRRVA*ASCPAP
Trigger: AGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGGGCAGTAGAGACAGCTaGGTCCTTCCCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPGSRDS*VLPFPL
Trigger: GAGGGGGAAGGGAAGGACGCAGCTGTCTCTACTGCC...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCGCAGCACTTGGGCGCTaGAGGGCACGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSAALGR*RARGSR
Trigger: TCTACTGCCTCGTGCCCTGCAGCGCCCAAGTGCTGC...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCTCAGCCTGAGGAGCTaGAGCACTTGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KPRSHLWLRARSTPGLSILSLRS*STWALQ
Trigger: CTGCAGCGCCCAAGTGCTGCAGCTCCTCAGGCTGAG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTCTCAGCCTGAGGAGCTaGAGCACTTGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSLSLRS*STWALQ
Trigger: CTGCAGCGCCCAAGTGCTGCAGCTCCTCAGGCTGAG...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCTGCTGGGGCGGCAACTaGAGGAGCCGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGACWGGN*RSRGRA
Trigger: GGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCA...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGTGCTCCGCGCTTCTCTaGGCCTCTGATCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRCSALL*ASDLFL
Trigger: AAGAAAAAGATCAGAGGCCCAGAGAAGCGCGGAGCA...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGTCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GDAVLAAVVQHLGHVPLQSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...CTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLNPHGC*RWVGSG
Trigger: TCCAGATCCGACCCATCTTCAGCAACCGTGGGGATT...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACGGGCCGTTCTCAGCCTaGGGAGCTGCAGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHGPFSA*GAAALG
Trigger: CCCAAGTGCTGCAGCTCCTCAGGCTGAGAACGGCCC...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCTGCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPQASKSGLSFVSGSCMLLQLQG*CSRPFC
Trigger: GCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAG...CAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSIGHLG*LGGCWG
Trigger: GCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAAT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCGGCTTTATCGCCGCCGAGGCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: ATVTKSGFAALAALSPPRPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...CCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCTCAGCCTCGGGTTCTaGAGCCGAGGTTTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTLSLGF*SRGFGR
Trigger: GCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAG...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPHPGPC*SRHAAT
Trigger: AGTGGCTGCATGACGAGATCAGCATGGCCCAGGATG...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGAEPSGSAGCHHELFPGHPGPC*SRHAAT
Trigger: AGTGGCTGCATGACGAGATCAGCATGGCCCAGGATG...ACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCCTCGAAGAGTGGCCTaGGCTTCGTGTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHPRRVA*ASCPAP
Trigger: AGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGG...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGGGGCCGTTCTCAGCCTaGGGAGCTGCAGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRGPFSA*GAAALG
Trigger: CCCAAGTGCTGCAGCTCCTCAGGCTGAGAACGGCCC...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSSLLLS*STLGMS
Trigger: GGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGA...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGGGTGCCTCGGTGGCTaGTGGGGCGGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ILQGTSKGGPQLLQLFTGGCLGG*WGGNCR
Trigger: CCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCC...TCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCGGGTGCCTCGGTGGCTaGTGGGGCGGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: RASILAQFCIITQLGSPLGCLGG*WGGNCR
Trigger: CCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCC...GAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATCTCCATATCATAGAGTaGGATCGCCAACTGTCGCCG +
Preference number: 4 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHLHIIE*DRQLSP
Trigger: CGGCGACAGTTGGCGATCCCACTCTATGATATGGAG...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000547528.5
CDS-3UTR CCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGAGGAGCTGCAGCACTTaGGCGCTGCAGGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRRSCST*ALQGTR
Trigger: CCTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCT...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACCTCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: TSPQASKSGLSFVSGSCMRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...CATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSNPHGC*RWVGSG
Trigger: TCCAGATCCGACCCATCTTCAGCAACCGTGGGGATT...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSNPHGC*RWVGSG
Trigger: TCCAGATCCGACCCATCTTCAGCAACCGTGGGGATT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSMLISS*SHSSQS
Trigger: GCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCAT...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGAAGAGGTCATACACGTaGTCTCTGTCCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPKRSYT*SLSRPS
Trigger: GGATGGCCTGGACAGAGAGCACGTGTATGACCTCTT...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LDILGASVAAGAATAGAAICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...CGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TCTAGCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATGATGCTATCCCAGTGCTGGGGCGGCAACTaGAGGAGCCGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSHMLAYLAFPLVMMLSQCWGGN*RSRGRA
Trigger: GGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCA...CTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGGCTCTGGGTAGTCACTaGTGCACTGGACGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRALGSH*CTGRPG
Trigger: ACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGC...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACGACCCTTCTGCGTTTaGAAGGCTGCTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSRPFCV*KAALLH
Trigger: ATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCG...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGAAGATGGGTCGGATCTaGACCACCTCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GDAVLAAVVQHLGHVPLQKMGRI*TTSPQA
Trigger: GGCCTGTGGGGAGGTGGTCCAGATCCGACCCATCTT...CTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCTCCTTCTGCTTCGAAGGGGGCTCCACATCTACGGCAGCACATTTCCCAGCGGGTAGGCCAGGCCCTTTaGTTTGCCAGCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SPSASKGAPHLRQHISQRVGQAL*FASPVG
Trigger: ACCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTAC...CCGCTGGGAAATGTGCTGCCGTAGATGTGGAGCCCCCTTCGAAGCAGAAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCGGCTTTACTCAGCCTCGGGTTCTaGAGCCGAGGTTTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: NPTGATVTKSGFAALAALLSLGF*SRGFGR
Trigger: GCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAG...TAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR TCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAG +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSSRPPF*PIPPTE
Trigger: CTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGA...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CATCTTGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCAGGAGCCGCGGCAGGATAGTTCTGAATTACTaGCTCTGGTATTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLGCLGGCWGGNCRSRGRIVLNY*LWYWVF
Trigger: GAAGACCCAATACCAGAGTCAGTAATTCAGAACTAT...CCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCAATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGACACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LHSRASILAQFCIITQLGHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGCAGCACTTGGGCGCTaGAGGGCACGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAAALGR*RARGSR
Trigger: TCTACTGCCTCGTGCCCTGCAGCGCCCAAGTGCTGC...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGGTAGGCCAGGCCCTTTaGTTTGCCAGCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRVGQAL*FASPVG
Trigger: ACCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTAC...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTAGCCACATGTTGGCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGCHHELFPGCNTLATCWQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...CCAACATGTGGCTAGAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: NSLAKSALDILGASVAAGPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...CCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATTGGTATTGGGTCTTCTaGCCATTCTTCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHWYWVF*PFFILC
Trigger: GCAGAGTATGAAGAATGGTCAGAAGACCCAATACCA...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACCTCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGAAGGCAGGCCTGAGATaGACAGCTTGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TSPQASKSGLSFVSGSCMKAGLR*TACVSL
Trigger: TAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTT...CATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTGCCTTTTCTTCTTCTTaGTGCACAAGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSAFSSS*CTRAAS
Trigger: GGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGC...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGGCTGCCTTCTCCTTCTaGTTCGAAGGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRAAFSF*FEGGST
Trigger: TGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGC...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLSLLLS*STLGMS
Trigger: GGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGA...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGCTCGCTCCGTATGTCTaGGGCAAAAGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRLAPYV*GKSMGP
Trigger: TGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAG...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCCGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GRLLTKTVMLSLLLSCSTRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: STQIRQELLSRKAGLQPWPTLAP*SCMSQR
Trigger: CCGCTGCGACATACAAGACCATGGGGCCAGCGTGGG...CCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCACCTGGTGCCTTCCTaGTCTCCGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTHLVPS*SPASLE
Trigger: TTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTG...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCAACCCTAGGAGCTGCAGCACTTaGGCGCTGCAGGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: GGPQLLQLFTGVLFEINPRSCST*ALQGTR
Trigger: CCTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCT...AGGGTTGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTATGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IADFPQTHPHKRPFCELLCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTATGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSLKRSSTSCFRYSKARVCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...TACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTATCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: IADFPQTHPHKRPFCELLSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGTCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKSPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCAAAAGGGGCCGGAGCTaGCCAGAAACATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSKRGRS*PETFGQ
Trigger: TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR CAA 72 bp CTCAGAAACAGCTTGGCAAAATCGGCATTGGACATCTaGGGTGCCTCGGTGGCTGCTGGGGCGGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LRNSLAKSALDI*GASVAAGAATA
Trigger: TGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CAA 72 bp AATTGGCCAGTACCAGGCAGAGGTCACTGCCTAGGCTaGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NWPVPGRGHCLG*HPALDALLQWN
Trigger: GTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACCTCTGCCTGGTACTGGCCAATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCT +
Preference number: 4 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSRVSVF*TAISQS
Trigger: AGATTGGGATATAGCTGTTCAGAAAACTGAAACCCG...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTAATCCCCACGGTTGCTaGAGATGGGTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPNPHGC*RWVGSG
Trigger: TCCAGATCCGACCCATCTTCAGCAACCGTGGGGATT...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTAAGGCAGGCCTGAGATaGACAGCTTGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSKAGLR*TACVSL
Trigger: TAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTT...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTGAGCCGCCGAAGACCCGCTaGGGCAGAAGCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: FWNGIKVQGLTCRKCYLEPPKTR*GRSCPR
Trigger: CCGCGGGCAGCTTCTGCCTCAGCGGGTCTTCGGCGG...CTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTMLISS*SHSSQS
Trigger: GCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCAT...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCTGAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: SPQASKSGLSFVSGSCMLSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...CAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCACACTGGACGGCCCGGTaGAGAGCCTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSHWTAR*RAFRQC
Trigger: GCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTG...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSLGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LKRSSTSCFRYSKARVKALGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...CGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTCCTCTTCAGGGAGGCTaGCTTCTCCTTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPPLQGG*LLLLLR
Trigger: TCGAAGCAGAAGGAGAAGGCAGCCTCCCTGAAGAGG...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGGAGAAAGGCAGGCCTGAGATGAACAGCTTGTGTTTCTCTAGGGAAGTGCTGCTCAGCCTGAGGAGCTaGAGCACTTGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QEKGRPEMNSLCFSREVLLSLRS*STWALQ
Trigger: CTGCAGCGCCCAAGTGCTGCAGCTCCTCAGGCTGAG...CAGCACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTTTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 4 (lower is better)
Translates to: TPCLSMAKRYRLHKATVQGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...CTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: PGAEPSGSAGCHHELFPGEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...ACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GCAGTAAGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGGCCCAGCCTTaGACTCAGCCTCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AVSTQIRQELLSRKAGLQPWAQP*TQPRVL
Trigger: CAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGG...CTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCTTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: KPRSHLWLRARSTPGLSILSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTCGCCGGAAAAGACTGTaGACTTTCTCAAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSRRKRL*TFSSCE
Trigger: TTCACAGCTTGAGAAAGTCCACAGTCTTTTCCGGCG...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228284.8
CDS-3UTR CCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TPCSSGTTVITTRNSTSWKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...CCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp ACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAAGGAGCTGCAGCACTTaGGCGCTGCAGGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: TSKGGPQLLQLFTGVLFERSCST*ALQGTR
Trigger: CCTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCT...TTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCCGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITRHWTS*VPRWLL
Trigger: CAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCG...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
3UTR CAA 72 bp CCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTaGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PAAGMLFSTLLR*EGCSSSSSPHS
Trigger: AGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGCTCAGCCTCGGGTTCTaGAGCCGAGGTTTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SPQVIKVCLPNLHIISGLLSLGF*SRGFGR
Trigger: GCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAG...CAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTCAGCCTCGGGTTCTaGAGCCGAGGTTTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQLSLGF*SRGFGR
Trigger: GCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAG...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCACTCAGCCTCGGGTTCTaGAGCCGAGGTTTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSLSLGF*SRGFGR
Trigger: GCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAG...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILHPGPC*SRHAAT
Trigger: AGTGGCTGCATGACGAGATCAGCATGGCCCAGGATG...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTCCTCGAAGAGTGGCCTaGGCTTCGTGTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLIETLFHLLLQILQGTSPRRVA*ASCPAP
Trigger: AGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGG...ACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSQCLKG*FLFFKL
Trigger: GAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCCAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPQCLKG*FLFFKL
Trigger: GAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTG...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCTCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YSKARVKAALNSSSSLLEMLISS*SHSSQS
Trigger: GCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCAT...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTCTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSLSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDLGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 4 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCGCTGCCTTCTCCTTCTaGTTCGAAGGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITAAFSF*FEGGST
Trigger: TGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGC...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAGCAGCACTTGGGCGCTaGAGGGCACGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LSLKRSSTSCFRYSKARVAALGR*RARGSR
Trigger: TCTACTGCCTCGTGCCCTGCAGCGCCCAAGTGCTGC...TACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTATGCTGGGGCGGCAACTaGAGGAGCCGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLCWGGN*RSRGRA
Trigger: GGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCA...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAATCCTTTTGCTGGGGCGGCAACTaGAGGAGCCGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VQGQFLIARLCTDKTKSFCWGGN*RSRGRA
Trigger: GGCCCTGCCGCGGCTCCTGCAGTTGCCGCCCCAGCA...AAAGGATTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR GCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCAGGGTGCCTCGGTGGCTaGTGGGGCGGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSGCLGG*WGGNCR
Trigger: CCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCACCC...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGGAGAAAGGCAGGCCTGAGATGAACAGCTTGTGTTTCTCTAGGGAAGTGCTGGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 4 (lower is better)
Translates to: QEKGRPEMNSLCFSREVLGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...CAGCACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTTTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGTACGCTCCGTATGTCTaGGGCAAAAGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CILLWTPCSSGTTVITTRYAPYV*GKSMGP
Trigger: TGGCCCCATGCTTTTGCCGCAGACATACGGAGCGTA...CCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp TCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCAATCCTACCTTGGGCCCAGCCTTaGACTCAGCCTCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SQSSRAFCMLLHSRASILPWAQP*TQPRVL
Trigger: CAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGG...TAGGATTGAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKPTLAP*SCMSQR
Trigger: CCGCTGCGACATACAAGACCATGGGGCCAGCGTGGG...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: YSKARVKAALNSSSSLLELLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TPCLSMAKRYRLHKATVQLSRPS*AMLISS
Trigger: TGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG...CTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSRGRVL*SYVNQQ
Trigger: CTGTTGGTTTACATATGACCAAAGGACTCGCCCTCT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGTGTCGTGCAGCACCTTaGGCATGTCCCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AKRYRLHKATVQGQFLIACRAAP*ACPSSG
Trigger: CCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACA...CGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGCACCTGGTGCCTTCCTaGTCTCCGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRHLVPS*SPASLE
Trigger: TTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTG...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSSAAKA*GHLVPS
Trigger: GGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGA...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGTCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: SPQVIKVCLPNLHIISGLSWVPR*LLGRQL
Trigger: CAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGA...CAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGTTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACA +
Preference number: 4 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPFSETA*QNRHWT
Trigger: TGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAA...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: STSTAAHFPAGPAATSTFAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...AAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GTTTCCTCCAGTAAAATGGGGATAGATAACAGGGCTTCCTTCACAGGGTCGTGGGCGGGTTTGCAGCCTTaGCGGCTTTATCGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: VSSSKMGIDNRASFTGSWAGLQP*RLYRRR
Trigger: TCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGC...CCACGACCCTGTGAAGGAAGCCCTGTTATCTATCCCCATTTTACTGGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR CAA 72 bp GGTCACTGCCTAGGCTTGCATCCTGCTCTGGACGCCTaGCTCCAGTGGAACCACAGTGATTACCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: GHCLGLHPALDA*LQWNHSDYHKE
Trigger: TTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAG +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGSRPPF*PIPPTE
Trigger: CTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGA...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACCTCGAAGAGTGGCCTaGGCTTCGTGTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQPRRVA*ASCPAP
Trigger: AGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGCAGCCTTGGTGCCTCTaGCTGCAACAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRYRLHKATVQGQFLIARQPWCL*LQQCFF
Trigger: GAAGAAGCACTGTTGCAGGCAGAGGCACCAAGGCTG...CCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGGCCTTTTCTTCTTCTTaGTGCACAAGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTAFSSS*CTRAAS
Trigger: GGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGC...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCCTCATCATCCTCATCTaGTCCGCGCTTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGLIILI*SALLWA
Trigger: GGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAG...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGGAGAAAGGCAGGCCTGAGATGAACAGCTTGTGTTTCTCTAGGGAAGTGCTGTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: QEKGRPEMNSLCFSREVLSLLLS*STLGMS
Trigger: GGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGA...CAGCACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTTTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGCAGCACTTGGGCGCTaGAGGGCACGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPQVIKVCLPNLHIISGLAALGR*RARGSR
Trigger: TCTACTGCCTCGTGCCCTGCAGCGCCCAAGTGCTGC...CAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCCTAGGCTTGCATCCTaGTCTGGACGCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPCSSGTTVITTRNSTSWPRLAS*SGRLAP
Trigger: TGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGG...CCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR GCA 90 bp CTTGCGAATGAGTTTATTTCTACTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTCTGGAAGATGCCCGCTaGCCACCCCCGGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LANEFISTVGRVVKSGSSLEDAR*PPPGPP
Trigger: AGGTGGGCCCGGGGGTGGGCAGCGGGCATCTTCCAG...AGAACTCCCACTCTTAACCACACGTCCAACAGTAGAAATAAACTCATTCGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp TGGGCAGGCAGTAAGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGCACGAAAAGCGGGTTTaGAGCCTTGGCGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: WAGSKHSNPTGATVTKSGHEKRV*SLGGFI
Trigger: GATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTG...CCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCTTACTGCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp GACGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTGAACTGGCCCCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: DVFLQSVLIKQASPTELAPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...GGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR CCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILLLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCTCCATATCATAGAGTaGGATCGCCAACTGTCGCCG +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGLHIIE*DRQLSP
Trigger: CGGCGACAGTTGGCGATCCCACTCTATGATATGGAG...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
CDS-3UTR CCA 90 bp GCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTAGCCACATGTTGGGTAGGCCAGGCCCTTTaGTTTGCCAGCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AGCHHELFPGCNTLATCWVGQAL*FASPVG
Trigger: ACCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTAC...CCAACATGTGGCTAGAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCSAAKA*GHLVPS
Trigger: GGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGA...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTTGCCTCGGTGGCTGCTaGGGCGGCAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPCLGGC*GGNCRS
Trigger: GCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCA...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVRHWTS*VPRWLL
Trigger: CAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCTGGAACTTTCCTCTGAGGAGGGTTGCTGATTGCCACTTTGATGATGTTCTCCAGGACACCACATCCTaGGCCCAGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWNFPLRRVADCHFDDVLQDTTS*AQPAEW
Trigger: CCACTCTGCAGGCTGGGCCCAGGATGTGGTGTCCTG...GAGAACATCATCAAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGGCTTGCATCCTGCTCTaGACGCCTTGCTCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TPCSSGTTVITTRNSTSWACILL*TPCSSG
Trigger: TCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGC...CCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR CAA 72 bp GTCTCCCAGCGTCCCGTTCACTTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGACATCTTGGGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: VSQRPVHFLRNS*AKSALDILGAS
Trigger: CGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAAGTGAACGGGACGCTGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTAGCCACATGTTGGCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: AGCHHELFPGCNTLATCWHPGPC*SRHAAT
Trigger: AGTGGCTGCATGACGAGATCAGCATGGCCCAGGATG...CCAACATGTGGCTAGAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCCTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 4 (lower is better)
Translates to: RASILAQFCIITQLGSPLLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...GAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp ATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATATCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MAKRYRLHKATVQGQFLISAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...TATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGCACTGAAAGGCTCTTaGCTTAGAACCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GTSKGGPQLLQLFTGVLFALKGS*LRTPSP
Trigger: AGGGGAAGGGGTTCTAAGTCAAGAGCCTTTCAGTGC...AAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTGGGGACCCGAGGACCTaGAAGACTGGAAGATGCCCG +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSGDPRT*KTGRCP
Trigger: CGGGCATCTTCCAGTCTTTCAGGTCCTCGGGTCCCC...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTCAGCCTTGGTGCCTCTaGCTGCAACAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSQPWCL*LQQCFF
Trigger: GAAGAAGCACTGTTGCAGGCAGAGGCACCAAGGCTG...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCAGCCTTGGTGCCTCTaGCTGCAACAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLNPSPVLHNHAAWITTQPWCL*LQQCFF
Trigger: GAAGAAGCACTGTTGCAGGCAGAGGCACCAAGGCTG...AGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AKRYRLHKATVQGQFLIARSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...CGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITRSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVLQLQG*CSRPFC
Trigger: GCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLIETLFHLLLQILQGTSLQLQG*CSRPFC
Trigger: GCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAG...ACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCCCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITPSGPC*YFYILC
Trigger: ACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGG...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCTCGCTCCGTATGTCTaGGGCAAAAGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVLAPYV*GKSMGP
Trigger: TGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQIGHLG*LGGCWG
Trigger: GCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAAT...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AACAGCTTGGCAAAATCGGCATTGGACATCTTGGGTGCCTCGGTGGCTGCTGGGTCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSLAKSALDILGASVAAGSLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...CCCAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGCTGCTCTGGACGCCTTaGTCCAGTGGAACCACAGTG +
Preference number: 4 (lower is better)
Translates to: QFCYLLLIPNQRTAQLMWLLWTP*SSGTTV
Trigger: CACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAG...CCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR GCA 90 bp AGGCAATGGGCAGGCAGTAAGCACTCAAATCCGACAGGAGCTACTGTCACGAAACCGCAGTCGCCATCTTaGGCTTCTAATGACTCTCGG +
Preference number: 4 (lower is better)
Translates to: RQWAGSKHSNPTGATVTKPQSPS*ASNDSR
Trigger: CCGAGAGTCATTAGAAGCGCAAGATGGCGACTGCGG...TTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCTTACTGCCTGCCCATTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTACCCCCGGGCCCACCTaGTCCTCCAGTCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSTPGPT*SSSLSI
Trigger: GATTGAGAGACTGGAGGAGCAGGTGGGCCCGGGGGT...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTCCTTGGGCCCAGCCTTaGACTCAGCCTCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NAFFSARALFRCSAFSSSPWAQP*TQPRVL
Trigger: CAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGG...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTCCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCATTTCACTCATCTTCTaGCGGGCCATCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGISLIF*RAILTL
Trigger: CAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAAT...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCCCACCAACTGAGTACTaGCCATACTCTAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLPPTEY*PYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGG...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCTGCTCCGCGCTTCTCTaGGCCTCTGATCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGCSALL*ASDLFL
Trigger: AAGAAAAAGATCAGAGGCCCAGAGAAGCGCGGAGCA...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTTCTCGACCAGGGCGCGCTCAAAGATCAACTGAATGCGAGCAGGATCGCCAATCGACCCTTCTGCGTTTaGAAGGCTGCTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLDQGALKDQLNASRIANRPFCV*KAALLH
Trigger: ATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCG...ATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTGGTCGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAACAGGCCTCGAAGAGTaGCCTGAGCTTCGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQTGLEE*PELRVR
Trigger: CCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGT...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCCTTCTCTGCAGCCTTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCAACAGGCCTCGAAGAGTaGCCTGAGCTTCGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SFSAAFILCSLTRANRVSTGLEE*PELRVR
Trigger: CCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGT...TGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAAGGCTGCAGAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAGATGGGTCGGATCTaGACCACCTCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQKMGRI*TTSPQA
Trigger: GGCCTGTGGGGAGGTGGTCCAGATCCGACCCATCTT...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: CILLWTPCSSGTTVITTRTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...CCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp ACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAACACCTGGTGCCTTCCTaGTCTCCGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TSKGGPQLLQLFTGVLFEHLVPS*SPASLE
Trigger: TTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTG...TTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAATCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LIETLFHLLLQILQGTSKSAAKA*GHLVPS
Trigger: GGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGA...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTCTTGGGTGCCTCGGTaGCTGCTGGGGCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHSWVPR*LLGRQL
Trigger: CAGTTGCCGCCCCAGCAGCCACCGAGGCACCCAAGA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCACGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSRHWTS*VPRWLL
Trigger: CAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCG...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCAGTGCACTGCTGGGTaGTGGGAGGTCCGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLQCTAG*WEVRRA
Trigger: GGCCCGGCGGACCTCCCACCACCCAGCAGTGCACTG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTTTCCTCCAGTAAAATGGGGATAGATAACAGGGCTTCCTTCACAGGGTCGTGGGAGGACCTGAAAGACTaGAAGATGCCCGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSSSKMGIDNRASFTGSWEDLKD*KMPAAH
Trigger: GTGGGCAGCGGGCATCTTCCAGTCTTTCAGGTCCTC...CCACGACCCTGTGAAGGAAGCCCTGTTATCTATCCCCATTTTACTGGAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTAGGCGGGCCAGGACATaGGGACCCGAGGACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSRRART*GPEDLK
Trigger: TTTCAGGTCCTCGGGTCCCCATGTCCTGGCCCGCCT...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
3UTR CAA 72 bp ACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: TFPSGPCCYFYI*CFSSCRDAVLD
Trigger: GTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CAGGGCGCGCTCAAAGATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAG +
Preference number: 4 (lower is better)
Translates to: QGALKDQLNASRIANFHLSRPPF*PIPPTE
Trigger: CTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGA...GAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGGACTTTCTCAAGCTGTaGATCAAAGGTTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRDFLKL*IKGLFP
Trigger: CGGGAACAAACCTTTGATTCACAGCTTGAGAAAGTC...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228284.8
CDS-3UTR TCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAGGAGGCAATCGGAGAGGGGCACATAGGAGACTTCTAAGGTACTGGCAATGTGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGNRRGAHRRLLRYWQCDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...ACATTGCCAGTACCTTAGAAGTCTCCTATGTGCCCCTCTCCGATTGCCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547528.5
CDS-3UTR TCA 90 bp AGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 4 (lower is better)
Translates to: SRASILAQFCIITQLGSPLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...TGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGCTGTTCTCGACCCTTCTGCGTTTGGAAGGCTGCTCTTCTTCATCATCGCCCCTCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CCSRPFCVWKAALLHHRPSFTVP*ALQISS
Trigger: AGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGA...GGGGCGATGATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATCCGCCGGGCCAGAGTaGAGTAAGGCATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQSAGPE*SKAFPV
Trigger: GACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGA...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CCACACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTGCACTGAAAGGCTCTTaGCTTAGAACCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PHRGKQTLASLLHFSGPSALKGS*LRTPSP
Trigger: AGGGGAAGGGGTTCTAAGTCAAGAGCCTTTCAGTGC...AGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLNAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDMLISS*SHSSQS
Trigger: GCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCAT...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCCCATTCTTCATACTCTaGAAATGTGGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: GRLLTKTVMLSLLLSCSTPFFIL*KCGLHI
Trigger: GATATGGAGGCCACATTTGCAGAGTATGAAGAATGG...GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCCTCTGCCTGCAACAGTaGTTCTTCATAGGGTTTATA +
Preference number: 4 (lower is better)
Translates to: GRLLTKTVMLSLLLSCSTLCLQQ*FFIGFI
Trigger: TATAAACCCTATGAAGAAGCACTGTTGCAGGCAGAG...GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: YSKARVKAALNSSSSLLEICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHLGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTGTTCTCGACCCTTCTaGGTTTGGAAGGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILCSRPF*VWKAAL
Trigger: AAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACA...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACCCTCTTCAGGGAGGCTaGCTTCTCCTTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDPLQGG*LLLLLR
Trigger: TCGAAGCAGAAGGAGAAGGCAGCCTCCCTGAAGAGG...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGCAGTAGAGACAGCTaGGTCCTTCCCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKGSRDS*VLPFPL
Trigger: GAGGGGGAAGGGAAGGACGCAGCTGTCTCTACTGCC...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCTCAGCCTGAGGAGCTaGAGCACTTGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPLSLRS*STWALQ
Trigger: CTGCAGCGCCCAAGTGCTGCAGCTCCTCAGGCTGAG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TTCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FSSGNQGMPAKSPHNQWPIGHLG*LGGCWG
Trigger: GCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAAT...AGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGTGCACTAGTCTACCATaGAAGCACTTACGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: CILLWTPCSSGTTVITTRCTSLP*KHLRSV
Trigger: TACGGAGCGTAAGTGCTTGCATGGTAGACTAGTGCA...CCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLPTLAP*SCMSQR
Trigger: CCGCTGCGACATACAAGACCATGGGGCCAGCGTGGG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVLLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCACTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCA +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSLSRPS*AMLISS
Trigger: TGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: GDAVLAAVVQHLGHVPLQHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...CTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AAATTACTTGATGATCAACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCAAGATGGGTCGGATCTaGACCACCTCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KLLDDQLHVSPWPRGTDSKMGRI*TTSPQA
Trigger: GGCCTGTGGGGAGGTGGTCCAGATCCGACCCATCTT...GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGGGGGGAAACAAACATTaGCCTCCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTGGNKH*PPFYTF
Trigger: AAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCC...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCTTTTCTGTCCTAACGTAGGCCAGGCCCTTTaGTTTGCCAGCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GTTVITTRNSTSWLFCPNVGQAL*FASPVG
Trigger: ACCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTAC...GTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCGLRLL*NFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACC...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp ATGTGGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAGATTTCTCACCTGGTGCCTTCCTaGTCTCCGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MWIIARAVDWHTHGYEISHLVPS*SPASLE
Trigger: TTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTG...AGAAATCTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTAAGGAGCTGCAGCACTTaGGCGCTGCAGGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLRSCST*ALQGTR
Trigger: CCTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCT...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCACTGCTGGGTGGTaGGAGGTCCGCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLCTAGW*EVRRAR
Trigger: TCTGGCCCGGCGGACCTCCCACCACCCAGCAGTGCA...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTGTGTTTCGCCGGAAAAGACTGTaGACTTTCTCAAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LRQHISQRALLLLLHFVFRRKRL*TFSSRA
Trigger: TGCTCGGCTTGAGAAAGTCCACAGTCTTTTCCGGCG...AAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546728.5
CDS-3UTR CCA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGCTAGGGCCGTAGACTaGCACACACATGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCARAVD*HTHGYE
Trigger: CTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGC...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCTGGTATTGGGTCTTCTaGCCATTCTTCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGWYWVF*PFFILC
Trigger: GCAGAGTATGAAGAATGGTCAGAAGACCCAATACCA...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCAATCCTACGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: SQSSRAFCMLLHSRASILRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...TAGGATTGAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCT +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRRVSVF*TAISQS
Trigger: AGATTGGGATATAGCTGTTCAGAAAACTGAAACCCG...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GGGCAGGTTGCTGACAAAGACGGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GQVADKDGDAVLAAVVQHLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...GTGCTGCACGACAGCAGCAAGGACAGCATCACCGTCTTTGTCAGCAACCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SKARVKAALNSSSSLLESQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...AGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CACTGCCTAGGCTTGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGCACACACATGGGTATaGGATTTCTTTGTAAACACA +
Preference number: 4 (lower is better)
Translates to: HCLGLHPALDALLQWNHSAHTWV*DFFVNT
Trigger: TGTGTTTACAAAGAAATCTCATACCCATGTGTGTGC...ACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp AGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGGTGGCGAGGATTCAATaGGATAACGTTTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: STQIRQELLSRKAGLQPWVARIQ*DNVCKA
Trigger: TGCCTTGCAAACGTTATCTCATTGAATCCTCGCCAC...CCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGALSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCAACCCTGCCTTTTCTTCTTCTTaGTGCACAAGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGPQLLQLFTGVLFEINPAFSSS*CTRAAS
Trigger: GGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGC...AGGGTTGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCTGTTCTCGACCCTTCTaGGTTTGGAAGGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLCSRPF*VWKAAL
Trigger: AAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACA...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACCCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDPSGPC*YFYILC
Trigger: ACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGG...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTATCTTCATCACAGCCTaGGACGCCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: STSTAAHFPAGPAATSTFIFITA*DAWDSF
Trigger: AAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGAT...AAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCAGGCAGTAGAGACAGCTaGGTCCTTCCCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSGSRDS*VLPFPL
Trigger: GAGGGGGAAGGGAAGGACGCAGCTGTCTCTACTGCC...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTGGCAGTAGAGACAGCTaGGTCCTTCCCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPGSRDS*VLPFPL
Trigger: GAGGGGGAAGGGAAGGACGCAGCTGTCTCTACTGCC...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAATCCTTTCCTCTCCGTCAGCCTTaGGCCCAGCCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: VQGQFLIARLCTDKTKSFPLRQP*AQPWTQ
Trigger: CTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGG...AAAGGATTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQLLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCCCACCAACTGAGTACTaGCCATACTCTAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: QSSLNPSPVLHNHAAWITPPTEY*PYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGG...GGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCTGCGTTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCCATATCATAGAGTaGGATCGCCAACTGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SAFGRLLFFIIAPLFLIILHIIE*DRQLSP
Trigger: CGGCGACAGTTGGCGATCCCACTCTATGATATGGAG...GATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAACGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546728.5
CDS-3UTR CCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAATTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: LIETLFHLLLQILQGTSKFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGTGCTCCGCGCTTCTCTaGGCCTCTGATCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FVFLQLQGCCSRPFCVWKCSALL*ASDLFL
Trigger: AAGAAAAAGATCAGAGGCCCAGAGAAGCGCGGAGCA...CTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCAAGATGGGTCGGATCTaGACCACCTCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFKMGRI*TTSPQA
Trigger: GGCCTGTGGGGAGGTGGTCCAGATCCGACCCATCTT...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCGTAGGCCAGGCCCTTTaGTTTGCCAGCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPVGQAL*FASPVG
Trigger: ACCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTAC...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAATCCTTTAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VQGQFLIARLCTDKTKSFKHGAT*CLPGLR
Trigger: CCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTT...AAAGGATTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTGGCAAAATCGGCATTaGACATCTTGGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVWQNRH*TSWVPR
Trigger: CCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCA...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAATGGCAAAATCGGCATTaGACATCTTGGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TSKGGPQLLQLFTGVLFEWQNRH*TSWVPR
Trigger: CCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCA...TTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTGATGCTGTCCTTGCTGCTGTCGTGCAGCACCTTGGGCATGTCCCTCTTCAGCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GDAVLAAVVQHLGHVPLQLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...CTGAAGAGGGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGACAGCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGGACGCCTTGCTCCAGTaGAACCACAGTGATTACCAC +
Preference number: 4 (lower is better)
Translates to: QFCYLLLIPNQRTAQLMWDALLQ*NHSDYH
Trigger: GTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTC...CCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKNQWPG*SRHSKL
Trigger: AAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATT...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACGATCACCACTCTCATTaGAACGCTCTTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDDHHSH*NALPPP
Trigger: AGGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATC...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCACTGTCCTCTCCATGGTaGGTAACACTTCGCAGACGT +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSLSSPW*VTLRRR
Trigger: ACGTCTGCGAAGTGTTACTCACCATGGAGAGGACAG...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: AKRYRLHKATVQGQFLIASFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...CGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAACCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCCCGTTTTCTTGCCATTaGAAGAGAAACTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: ALKSDRSYCHEKRVCSLGPFSCH*KRNWEL
Trigger: AAGTTCCCAGTTTCTCTTTCAATGGCAAGAAAACGG...GCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GACGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTGAACTGGCCCGCTCTTCCACCTCCTaGTTCAGATACTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DVFLQSVLIKQASPTELARSSTS*FRYSKA
Trigger: TGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCG...GGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR GCA 90 bp CTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTGTGTTTATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LRQHISQRALLLLLHFVFILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...AAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGGCCTTTTCTTCTTCTTaGTGCACAAGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKAFSSS*CTRAAS
Trigger: GGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGC...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCACTCATCATCCTCATCTaGTCCGCGCTTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSLIILI*SALLWA
Trigger: GGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAG...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACCCAGCGGGCCCTGCTaGTACTTCTACATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQPSGPC*YFYILC
Trigger: ACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTCCTTGCTGCTGTCGTaGAGCACCTTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHSLLLS*STLGMS
Trigger: GGACATGCCCAAGGTGCTGCACGACAGCAGCAAGGA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGATCTTCATCACAGCCTaGGACGCCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQIFITA*DAWDSF
Trigger: AAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGAT...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTAGGAGCCATCTGTGGTTaGGAGCACGCAGCACACCAG +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLGAICG*EHAAHQ
Trigger: CTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCC...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCACACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: PHRGKQTLASLLHFSGPSEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...AGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGAGCCAGGACGAAGTTTaGACTAGTCTACCATGCAAG +
Preference number: 4 (lower is better)
Translates to: TPCSSGTTVITTRNSTSWSQDEV*TSLPCK
Trigger: CTTGCATGGTAGACTAGTGCAAACTTCGTCCTGGCT...CCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR GCA 90 bp GCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGTCACCTGGCAATTCTaGTATCTCCTCCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: AILLSPPHPKPANSTAYVVTWQF*YLLLIP
Trigger: TGGGATGAGGAGGAGATAGCAGAATTGCCAGGTGAC...CACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: YSKARVKAALNSSSSLLEHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKRSSTSCFRYSKARVKATLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...CGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGAACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LHSRASILAQFCIITQLGTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGGCTCTGGGTAGTCACTaGTGCACTGGACGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLALGSH*CTGRPG
Trigger: ACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGC...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAATTACTTGATGATCAACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: KLLDDQLHVSPWPRGTDSFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTTGTCGTGCAGCACCTTaGGCATGTCCCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPCRAAP*ACPSSG
Trigger: CCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACA...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCTGTCGTGCAGCACCTTaGGCATGTCCCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPCRAAP*ACPSSG
Trigger: CCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACA...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGACAGGCCTCGAAGAGTaGCCTGAGCTTCGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLTGLEE*PELRVR
Trigger: CCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGT...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGGGGGAAACAAACATTaGCCTCCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: ILQGTSKGGPQLLQLFTGGGNKH*PPFYTF
Trigger: AAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCC...TCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGTGCCTCGGTGGCTGCTaGGGCGGCAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMCLGGC*GGNCRS
Trigger: GCTCCTGCAGTTGCCGCCCCAGCAGCCACCGAGGCA...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCATGGCAAAATCGGCATTaGACATCTTGGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VKAALNSSSSLLESCLKSWQNRH*TSWVPR
Trigger: CCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCA...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCCCAGCCTGCAGAGTaGTCACTTTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFAQPAE*SLFCHC
Trigger: GCAGTGGCAGAAAAGTGACCACTCTGCAGGCTGGGC...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAAAAAGGGGCCGGAGCTaGCCAGAAACATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISKRGRS*PETFGQ
Trigger: TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCCTTCTCTGCAGCCTTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCACGCCGGAAAAGACTGTaGACTTTCTCAAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SFSAAFILCSLTRANRVSRRKRL*TFSSRA
Trigger: TGCTCGGCTTGAGAAAGTCCACAGTCTTTTCCGGCG...TGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAAGGCTGCAGAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000547528.5
CDS-3UTR CCA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTACCTCACCAGTCACCTaGCAATTCTGCTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCTSPVT*QFCYLL
Trigger: GAGGAGATAGCAGAATTGCCAGGTGACTGGTGAGGT...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCATAGTTCTGAATTACTaGCTCTGGTATTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAIVLNY*LWYWVF
Trigger: GAAGACCCAATACCAGAGTCAGTAATTCAGAACTAT...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCCGCTCAAAGATCAACTaGATGCGAGCAGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: KATVQGQFLIARLCTDKTRSKIN*MRAGSP
Trigger: TGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCG...GGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CAGGGCGCGCTCAAAGATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: QGALKDQLNASRIANFHLSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...GAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCTCATTCTCTGCTCATTaGCACGAGCTAATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGSFSAH*HELIGF
Trigger: AAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGA...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAAGGCAGGCCTGAGATaGACAGCTTGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDKAGLR*TACVSL
Trigger: TAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTT...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGAAGGCAGGCCTGAGATaGACAGCTTGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AILLSPPHPKPANSTAYVKAGLR*TACVSL
Trigger: TAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTT...CACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCACAAAACCAAAGGGCTaGAACTCATGTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGTKPKG*NSCLDN
Trigger: GTTGTCTAAACATGAGTTTCAGCCCTTTGGTTTTGT...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGCTCTGCCTGCAACAGTaGTTCTTCATAGGGTTTATA +
Preference number: 4 (lower is better)
Translates to: KRYRLHKATVQGQFLIARLCLQQ*FFIGFI
Trigger: TATAAACCCTATGAAGAAGCACTGTTGCAGGCAGAG...CCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: SRASILAQFCIITQLGSPLSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...TGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAATTTTCATCTCAAAATCGATATATGCTTGATATTCTGCCAGCCTTGGTGCCTCTGGGTAGTCACTGGTaGACTGGACGGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QFSSQNRYMLDILPALVPLGSHW*TGRPGA
Trigger: TGCACCGGGCCGTCCAGTGCACCAGTGACTACCCAG...AGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LKRSSTSCFRYSKARVKAFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...CGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GACGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTGAACTGGCCGCCTTTTCTTCTTCTTaGTGCACAAGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DVFLQSVLIKQASPTELAAFSSS*CTRAAS
Trigger: GGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGC...GGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR GCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATGTTCTCGACCCTTCTaGGTTTGGAAGGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQCSRPF*VWKAAL
Trigger: AAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACA...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGATCTTCATCACAGCCTaGGACGCCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: EVSYKKGPELARNIWTTVIFITA*DAWDSF
Trigger: AAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGAT...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAATCTTCATCACAGCCTaGGACGCCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: IADFPQTHPHKRPFCELLIFITA*DAWDSF
Trigger: AAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGAT...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPLLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: SSLNPSPVLHNHAAWITTRGRVL*SYVNQQ
Trigger: CTGTTGGTTTACATATGACCAAAGGACTCGCCCTCT...AGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTTAAACTTACGCAACAGATAAATGAGGAGTTGATTCCCACGACATATACAAGGGCTCTGGGTAGTCACTaGTGCACTGGACGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LKLTQQINEELIPTTYTRALGSH*CTGRPG
Trigger: ACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGC...CCTTGTATATGTCGTGGGAATCAACTCCTCATTTATCTGTTGCGTAAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGTGTCGTGCAGCACCTTaGGCATGTCCCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLCRAAP*ACPSSG
Trigger: CCCTGAAGAGGGACATGCCCAAGGTGCTGCACGACA...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGGGGGAAACAAACATTaGCCTCCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: LKRSSTSCFRYSKARVKAGGNKH*PPFYTF
Trigger: AAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCC...CGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASSAAKA*GHLVPS
Trigger: GGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGA...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCGGCATTGGACATCTTaGGTGCCTCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVRHWTS*VPRWLL
Trigger: CAGCAGCCACCGAGGCACCCAAGATGTCCAATGCCG...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTTCCCCAGTGCACTGCTaGGTGGTGGGAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: HKRPFCELLASAISSFKISPVHC*VVGGPP
Trigger: CGGCGGACCTCCCACCACCCAGCAGTGCACTGGGGA...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGACAGCACAGCTTATGTaGATCATAGCTAGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: QFCYLLLIPNQRTAQLMWTAQLM*IIARAV
Trigger: TACGGCCCTAGCTATGATCCACATAAGCTGTGCTGT...CCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
3UTR CAA 72 bp GGAGGGTTGCTGATTGCCACTTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATCTTCATCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGLLIATLMMFS*IVMPSIFITAC
Trigger: GCAGGCTGTGATGAAGATGGACGGCATGACTATCAAAGAGAACATCATCAAAGTGGCAATCAGCAACCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp ACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTTGGTATTGGGTCTTCTaGCCATTCTTCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: TLIETLFHLLLQILQGTSWYWVF*PFFILC
Trigger: GCAGAGTATGAAGAATGGTCAGAAGACCCAATACCA...ACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTATAGTTCTGAATTACTaGCTCTGGTATTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GTSKGGPQLLQLFTGVLFIVLNY*LWYWVF
Trigger: GAAGACCCAATACCAGAGTCAGTAATTCAGAACTAT...AAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCATAGTTCTGAATTACTaGCTCTGGTATTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RASILAQFCIITQLGSPLIVLNY*LWYWVF
Trigger: GAAGACCCAATACCAGAGTCAGTAATTCAGAACTAT...GAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGGAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LCFSSCRDAVLDPSAFGRKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...CCTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TCCTTCTCTGCAGCCTTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCATCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SFSAAFILCSLTRANRVSSFTVP*ALQISS
Trigger: AGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGA...TGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAAGGCTGCAGAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCAGCACTGAAAGGCTCTTaGCTTAGAACCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSALKGS*LRTPSP
Trigger: AGGGGAAGGGGTTCTAAGTCAAGAGCCTTTCAGTGC...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLIETLFHLLLQILQGTSQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...ACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGGCAAGCTTCCCCTACTaGACTGGCCAATGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLASFPY*TGQCCC
Trigger: GCAACAGCATTGGCCAGTTCAGTAGGGGAAGCTTGC...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR GCA 90 bp TCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCCATTCTTCATACTCTaGAAATGTGGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: SSLNPSPVLHNHAAWITTPFFIL*KCGLHI
Trigger: GATATGGAGGCCACATTTGCAGAGTATGAAGAATGG...AGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAAATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LIETLFHLLLQILQGTSKILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAATGTTCTCGACCCTTCTaGGTTTGGAAGGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKCSRPF*VWKAAL
Trigger: AAGAGCAGCCTTCCAAACGCAGAAGGGTCGAGAACA...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 4 (lower is better)
Translates to: NAFFSARALFRCSAFSSSFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGGCTGCCTTCTCCTTCTaGTTCGAAGGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLAAFSF*FEGGST
Trigger: TGTGGAGCCCCCTTCGAAGCAGAAGGAGAAGGCAGC...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAACTCGCTCCGTATGTCTaGGGCAAAAGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQLAPYV*GKSMGP
Trigger: TGGCCCCATGCTTTTGCCGCAGACATACGGAGCGAG...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCATCTCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FGRLLFFIIAPLFLIILISLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...GATGAGGATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGCCTTGGGCCCAGCCTTaGACTCAGCCTCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMPWAQP*TQPRVL
Trigger: CAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGG...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTTGCGAATGAGTTTATTTCTACTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: LANEFISTVGRVVKSGSSLLIPR*PHGLVC
Trigger: ACATACAAGACCATGGGGCCAGCGTGGGATCAGCAG...AGAACTCCCACTCTTAACCACACGTCCAACAGTAGAAATAAACTCATTCGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAACTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LIETLFHLLLQILQGTSKLSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAATTTCACTCATCTTCTaGCGGGCCATCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKISLIF*RAILTL
Trigger: CAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAAT...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCA +
Preference number: 4 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASLSRPS*AMLISS
Trigger: TGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCA +
Preference number: 4 (lower is better)
Translates to: EAGIQSFLEGYRNYLMINLSRPS*AMLISS
Trigger: TGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG...GTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCACTCCATATCATAGAGTaGGATCGCCAACTGTCGCCG +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSLHIIE*DRQLSP
Trigger: CGGCGACAGTTGGCGATCCCACTCTATGATATGGAG...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
CDS-3UTR CCA 90 bp CAGATAAAACCAAATCCTTTACTTTCAGTTGTCGATCTAGGTACTGACTGTAACGCTCTGGGTAGTCACTaGTGCACTGGACGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QIKPNPLLSVVDLGTDCNALGSH*CTGRPG
Trigger: ACCGGGCCGTCCAGTGCACCAGTGACTACCCAGAGC...GTTACAGTCAGTACCTAGATCGACAACTGAAAGTAAAGGATTTGGTTTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAACGACCCTTCTGCGTTTaGAAGGCTGCTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKRPFCV*KAALLH
Trigger: ATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCG...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAATTTTCATCTCAAAATCGATATATGCTTGATATTCTGCCAGCCTTGGTGCCTACAGGCCTCGAAGAGTaGCCTGAGCTTCGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: QFSSQNRYMLDILPALVPTGLEE*PELRVR
Trigger: CCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGT...AGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR CCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTAGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLGLRLL*NFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACC...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLGLRLL*NFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACC...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTGTGTTTTTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACA +
Preference number: 4 (lower is better)
Translates to: LRQHISQRALLLLLHFVFFSETA*QNRHWT
Trigger: TGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAA...AAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGGGAAACATGAAACAATaGCTGACATGTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRGNMKQ*LTCHLQ
Trigger: TTGTAAATGACATGTCAGCCATTGTTTCATGTTTCC...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGATGACAAGTGTAAATTaGCCAGTACCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AILLSPPHPKPANSTAYVMTSVN*PVPGRG
Trigger: ACCTCTGCCTGGTACTGGCCAATTTACACTTGTCAT...CACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp CAGGGCGCGCTCAAAGATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QGALKDQLNASRIANFHLKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...GAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCACGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCT +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISRVSVF*TAISQS
Trigger: AGATTGGGATATAGCTGTTCAGAAAACTGAAACCCG...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCTTTTCTGTCCTAACTCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTTVITTRNSTSWLFCPNSFTVP*ALQISS
Trigger: AGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGA...GTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR TCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAAATATGAGGGAGCACTaGAAGGCTCTTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: QTHPHKRPFCELLASAISNMREH*KALDLE
Trigger: TTCTAAGTCAAGAGCCTTTCAGTGCTCCCTCATATT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAACCACTGCCCTCAATATaGGGGAGCACTGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQPLPSI*GSTERL
Trigger: GAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGG...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp TTGCACAGTCGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGAACAAAACCAAAGGGCTaGAACTCATGTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: LHSRASILAQFCIITQLGTKPKG*NSCLDN
Trigger: GTTGTCTAAACATGAGTTTCAGCCCTTTGGTTTTGT...TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCGACTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACCTCTGCCTGCAACAGTaGTTCTTCATAGGGTTTATA +
Preference number: 4 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDLCLQQ*FFIGFI
Trigger: TATAAACCCTATGAAGAAGCACTGTTGCAGGCAGAG...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: SPQVIKVCLPNLHIISGLSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...CAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCTTTTCTGTCCTAACATCTTCATCACAGCCTaGGACGCCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: GTTVITTRNSTSWLFCPNIFITA*DAWDSF
Trigger: AAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGAT...GTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR GCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGATTGGACATCTTGGGTaGCTCGGTGGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMIGHLG*LGGCWG
Trigger: GCCCCAGCAGCCACCGAGGCACCCAAGATGTCCAAT...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGAGTGGTCACTTTTCTaGCACTGCCCTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKEWSLF*HCPQYE
Trigger: CTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCGGGCACATGTGCTGTaGAGGGTGGAAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLRAHVL*RVEEKC
Trigger: ACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSPTLAP*SCMSQR
Trigger: CCGCTGCGACATACAAGACCATGGGGCCAGCGTGGG...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SARSFEENVSLIKLNGENPTLAP*SCMSQR
Trigger: CCGCTGCGACATACAAGACCATGGGGCCAGCGTGGG...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCCGCGGAGGAAGCCATaGCGTACTCATCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSPRRKP*RTHPHR
Trigger: GCGATGGGGATGAGTACGCCATGGCTTCCTCCGCGG...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AAATTACTTGATGATCAACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCCCACCAACTGAGTACTaGCCATACTCTAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: KLLDDQLHVSPWPRGTDSPPTEY*PYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGG...GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSRGRVL*SYVNQQ
Trigger: CTGTTGGTTTACATATGACCAAAGGACTCGCCCTCT...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAAAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQRGRVL*SYVNQQ
Trigger: CTGTTGGTTTACATATGACCAAAGGACTCGCCCTCT...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATGTGGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAGATTTCTGGGGGAAACAAACATTaGCCTCCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: MWIIARAVDWHTHGYEISGGNKH*PPFYTF
Trigger: AAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCC...AGAAATCTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGGGTCTCCGGCTTCTCTaGAACTTTCCTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVGLRLL*NFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACC...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTAAAAGGGGCCGGAGCTaGCCAGAAACATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPKRGRS*PETFGQ
Trigger: TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTT...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAACATACTCTGCAAATGTaGCCTCCATATCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATVQGQFLIARLCTDKTKHTLQM*PPYPSS
Trigger: GCTGCTCGGATATGGAGGCCACATTTGCAGAGTATG...TTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGACAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR TCA 90 bp GATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCAAAATCGATATATGCTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAG +
Preference number: 4 (lower is better)
Translates to: DQLNASRIANFHLKIDICSRPPF*PIPPTE
Trigger: CTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGA...GCATATATCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHSFTVP*ALQISS
Trigger: AGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAACAAATGTTTTATAGCTaGCTTCCCTCAGACCCACCC +
Preference number: 4 (lower is better)
Translates to: ATVQGQFLIARLCTDKTKQMFYS*LPSDPP
Trigger: GGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTG...TTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGACAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651280.1
CDS-3UTR TCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGACAAAACCAAAGGGCTaGAACTCATGTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKTKPKG*NSCLDN
Trigger: GTTGTCTAAACATGAGTTTCAGCCCTTTGGTTTTGT...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTTTGTGTTTCTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRQHISQRALLLLLHFVFLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...AAACACAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAACTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKLSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGCTCCAGCTGCAGGGATaGTGTTCTCGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMLQLQG*CSRPFC
Trigger: GCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAG...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHSLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTCTCATTATAATGGCATaGGTTCCGTCACAACTTCGG +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSLIIMA*VPSQLR
Trigger: CCGAAGTTGTGACGGAACGCATGCCATTATAATGAG...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPLSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTGAGCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: FWNGIKVQGLTCRKCYLELSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...CTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLLSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCACCAACTGAGTACTaGCCATACTCTAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPPPTEY*PYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTAACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGCACCTGGTGCCTTCCTaGTCTCCGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMHLVPS*SPASLE
Trigger: TTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTG...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTCCGAGGAGCCATCTGTaGTTGCGAGCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HKRPFCELLASAISSFKIPRSHL*LRARST
Trigger: TGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGG...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCGCCGGAAAAGACTGTaGACTTTCTCAAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLRRKRL*TFSSRA
Trigger: TGCTCGGCTTGAGAAAGTCCACAGTCTTTTCCGGCG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000546815.6
CDS-3UTR CCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCACTTCCCCTACTGAACTaGCCAATGCTGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSLPLLN*PMLLLF
Trigger: AAACAGCAACAGCATTGGCCAGTTCAGTAGGGGAAG...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR TCA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SARSFEENVSLIKLNGENHPGPC*SRHAAT
Trigger: AGTGGCTGCATGACGAGATCAGCATGGCCCAGGATG...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTTGGTATTGGGTCTTCTaGCCATTCTTCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPWYWVF*PFFILC
Trigger: GCAGAGTATGAAGAATGGTCAGAAGACCCAATACCA...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTATAGTTCTGAATTACTaGCTCTGGTATTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSIVLNY*LWYWVF
Trigger: GAAGACCCAATACCAGAGTCAGTAATTCAGAACTAT...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GACGTCTTTCTCCAGAGTGTCTTAATAAAGCAAGCTTCCCCTACTGAACTGGCCAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DVFLQSVLIKQASPTELAKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...GGCCAGTTCAGTAGGGGAAGCTTGCTTTATTAAGACACTCTGGAGAAAGACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR TCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFQCLKG*FLFFKL
Trigger: GAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCAGTGCCTGAAGGGCTaGTTTCTCTTCTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHQCLKG*FLFFKL
Trigger: GAGTTTAAAGAAGAGAAATCAGCCCTTCAGGCACTG...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTAAAGGCAGGCCTGAGATaGACAGCTTGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLKAGLR*TACVSL
Trigger: TAGAGAAACACAAGCTGTTCATCTCAGGCCTGCCTT...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTTTAAAATTAAAAGAATaGCGGGCACATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSLKLKE*RAHVLC
Trigger: GCACAGCACATGTGCCCGTCATTCTTTTAATTTTAA...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCAAGAGGCCATTCTGTaGATTACTAGCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLQEAIL*ITSICH
Trigger: ATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPNAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp GGAGTTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTCAGGAAGTGTTATCTTaGGCAAGAAACTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVLEWDQSTRPDLQEVLSQEVLS*ARNFPP
Trigger: TGGAGGAAAGTTTCTTGCTCAAGATAACACTTCCTG...AGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR TCA 90 bp GCTAGAACTGAGGCCTTAACCTCCAGAACCAGAAACCTTTCCATTTCTATTATCAGCACATACAAGAGTTaGACAGCTAGAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARTEALTSRTRNLSISIISTYKS*TARTEA
Trigger: GGCCTCAGTTCTAGCTGTTCAACTCTTGTATGTGCT...GATAATAGAAATGGAAAGGTTTCTGGTTCTGGAGGTTAAGGCCTCAGTTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCTTTCTGCATGTTATTaGACAGTCGAGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFLSACY*TVEPQS
Trigger: GGATTGAGGCTCGACTGTGCAATAACATGCAGAAAG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCTTTTCTTCTTCTTGCTaGACAAGGGCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPFSSSC*TRAASF
Trigger: GAAGGAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAA...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGATTTCACTCATCTTCTaGCGGGCCATCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLISLIF*RAILTL
Trigger: CAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAAT...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCA +
Preference number: 4 (lower is better)
Translates to: SARSFEENVSLIKLNGENLSRPS*AMLISS
Trigger: TGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLRGRVL*SYVNQQ
Trigger: CTGTTGGTTTACATATGACCAAAGGACTCGCCCTCT...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAGATAAAACCAAATCCTTTACTTTCAGTTGTCGATCTAGGTACTGACTGTAACTTCGCAGACGTGCTCTaGGTAGTCACTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: QIKPNPLLSVVDLGTDCNFADVL*VVTGAL
Trigger: CAGTGCACCAGTGACTACCCAGAGCACGTCTGCGAA...GTTACAGTCAGTACCTAGATCGACAACTGAAAGTAAAGGATTTGGTTTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCGACCCTTCTGCGTTTaGAAGGCTGCTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLRPFCV*KAALLH
Trigger: ATGAAGAAGAGCAGCCTTCCAAACGCAGAAGGGTCG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACAAAAGGGGCCGGAGCTaGCCAGAAACATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: EAGIQSFLEGYRNYLMINKRGRS*PETFGQ
Trigger: TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTT...GTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTTGCGAATGAGTTTATTTCTACTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTGTGGGAGTTCTGGAATaGGATCAAAGTACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LANEFISTVGRVVKSGSSVGVLE*DQSTRP
Trigger: AGGCCTTGTACTTTGATCCCATTCCAGAACTCCCAC...AGAACTCCCACTCTTAACCACACGTCCAACAGTAGAAATAAACTCATTCGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR TCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACTGGAGTCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATGCCTGTACTGGAGTCTTGTTTaGAATCAACCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TGVLFEINPSPQVIKVCLYWSLV*NQPFSS
Trigger: TGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTA...CAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR TCA 90 bp GCTAGAACTGAGGCCTTAACCTCCAGAACCAGAAACCTTTCCATTTCTATTATCTCAAAGTACAAGGCCTaGCTTGCAGGAAGTGTTATC +
Preference number: 4 (lower is better)
Translates to: ARTEALTSRTRNLSISIISKYKA*LAGSVI
Trigger: GATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGA...GATAATAGAAATGGAAAGGTTTCTGGTTCTGGAGGTTAAGGCCTCAGTTCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR TCA 90 bp ACTGTTGGACGTGTGGTTAAGAGTGGGAGTTCTGGAATGGGATCAAAGTACAAGAGGAAGTCGAGAGGGTaGGAGAAATTAAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: TVGRVVKSGSSGMGSKYKRKSRG*EKLRNS
Trigger: AGAATTTCTTAATTTCTCTCACCCTCTCGACTTCCT...CTTGTACTTTGATCCCATTCCAGAACTCCCACTCTTAACCACACGTCCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCACCATTCTTCATACTCTaGAAATGTGGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSPFFIL*KCGLHI
Trigger: GATATGGAGGCCACATTTGCAGAGTATGAAGAATGG...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCCCATTCTTCATACTCTaGAAATGTGGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPPFFIL*KCGLHI
Trigger: GATATGGAGGCCACATTTGCAGAGTATGAAGAATGG...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCCTCTGCCTGCAACAGTaGTTCTTCATAGGGTTTATA +
Preference number: 4 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFLCLQQ*FFIGFI
Trigger: TATAAACCCTATGAAGAAGCACTGTTGCAGGCAGAG...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAAATATGCTTGATATTCTaGCAGCCTTGGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQICLIF*QPWCLC
Trigger: GCAGAGGCACCAAGGCTGGCAGAATATCAAGCATAT...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SYKKGPELARNIWTTVSQLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 4 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp GCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAACAGGTAATCAAGGTATaGCTGCCAAATCTCCACATA +
Preference number: 4 (lower is better)
Translates to: ATVQGQFLIARLCTDKTKQVIKV*LPNLHI
Trigger: TATGTGGAGATTTGGCAGGCATACCTTGATTACCTG...TTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGACAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCCTCTTCAGGGAGGCTaGCTTCTCCTTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSPLQGG*LLLLLR
Trigger: TCGAAGCAGAAGGAGAAGGCAGCCTCCCTGAAGAGG...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR GCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGTCACTTTTCTGCCACTaGCCTCAATATGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVSLFCH*PQYEGA
Trigger: TGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGA...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GAAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: EAGIQSFLEGYRNYLMINLSISS*FFSSSS
Trigger: CGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAG...GTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAACCACCAACTGAGTACTaGCCATACTCTAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQPPTEY*PYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGG...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCC +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSLHVSP*PRGTDS
Trigger: GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAG...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp TCACTAGGCAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLGKENSPQQVAQIIPIQTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...TTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTGCCTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCAAAATCGATATATGCACTCTAGCCACATGTTaGCGTACTTGGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: DQLNASRIANFHLKIDICTLATC*RTWHFL
Trigger: GAGGAAATGCCAAGTACGCCAACATGTGGCTAGAGT...GCATATATCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp CTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTTGCTGCACAAGGGAAACATGAAACAATaGCTGACATGTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: LSPSSFPLFSLFFFLLHKGNMKQ*LTCHLQ
Trigger: TTGTAAATGACATGTCAGCCATTGTTTCATGTTTCC...CTTGTGCAGCAAGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR TCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCAAATCGATATATGCTTaGTATTCTGCCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPKSIYA*YSASLG
Trigger: ACCAAGGCTGGCAGAATATCAAGCATATATCGATTT...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTGCACTGAAAGGCTCTTaGCTTAGAACCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HKRPFCELLASAISSFKIALKGS*LRTPSP
Trigger: AGGGGAAGGGGTTCTAAGTCAAGAGCCTTTCAGTGC...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAATATACAAGGATTCCCTaGCGTCTTTCTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQYTRIP*RLSPEC
Trigger: ACACTCTGGAGAAAGACGTCAGGGAATCCTTGTATA...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR TCA 90 bp TCACTAGGCAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAATACGCAACAGATAAATaGGGAGTTGATTCCCACGAC +
Preference number: 4 (lower is better)
Translates to: SLGKENSPQQVAQIIPIQYATDK*GVDSHD
Trigger: GTCGTGGGAATCAACTCCTCATTTATCTGTTGCGTA...TTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTGCCTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS-3UTR GCA 90 bp AACGCTTTCTTCTCAGCCCGAGCTCTTTTCCGTTGTTCAGCCTTTTCTTCTTCTCTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NAFFSARALFRCSAFSSSLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...AGAAGAAGAAAAGGCTGAACAACGGAAAAGAGCTCGGGCTGAGAAGAAAGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAAAGTTCCCGAGCTTTCTaGATGTTATTGCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQSSRAF*MLLHSR
Trigger: TCGACTGTGCAATAACATGCAGAAAGCTCGGGAACT...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGTTTCCCAGCGGGCCCTaGTGCTACTTCTACATTTTG +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMFPSGP*CYFYIL
Trigger: CAAAATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAA...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGGGGGGAAACAAACATTaGCCTCCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVGGNKH*PPFYTF
Trigger: AAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCC...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGACAGCCTGCGACGCCTaGGATTCATTTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMTACDA*DSFSYS
Trigger: GGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGT...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTTGGCAAAATCGGCATTaGACATCTTGGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HKRPFCELLASAISSFKIWQNRH*TSWVPR
Trigger: CCGAGGCACCCAAGATGTCCAATGCCGATTTTGCCA...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGTCTTTATTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACA +
Preference number: 4 (lower is better)
Translates to: NCVSKTVCSRFASVPQSLFSETA*QNRHWT
Trigger: TGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAA...TAAAGACTGAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
3UTR CAA 72 bp AATAACACTCTCTTGCGAATGAGTTTATTTCTACTGTaGGACGTGTGGTTAAGAGTGGGAGTTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: NNTLLRMSLFLL*DVWLRVGVLEW
Trigger: CCATTCCAGAACTCCCACTCTTAACCACACGTCCAACAGTAGAAATAAACTCATTCGCAAGAGAGTGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR TCA 90 bp TCACTAGGCAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAACGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCT +
Preference number: 4 (lower is better)
Translates to: SLGKENSPQQVAQIIPIQRVSVF*TAISQS
Trigger: AGATTGGGATATAGCTGTTCAGAAAACTGAAACCCG...TTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTGCCTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCCATTCTTCATACTCTaGAAATGTGGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLPFFIL*KCGLHI
Trigger: GATATGGAGGCCACATTTGCAGAGTATGAAGAATGG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp ACTGGAGTCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATGCCTGCTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGVLFEINPSPQVIKVCLLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...CAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR GCA 90 bp GATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCAAAATCGATATATGCCAAAGATCAACTGAATaGGAGCAGGATCGCCAATTT +
Preference number: 4 (lower is better)
Translates to: DQLNASRIANFHLKIDICQRSTE*EQDRQF
Trigger: AAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTG...GCATATATCGATTTTGAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTATTTCACTCATCTTCTaGCGGGCCATCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSISLIF*RAILTL
Trigger: CAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAAT...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp GGTAAAGCAAGGTACACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGCTGGCCAGAAACATTTaGACAACTGTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GKARYTHFKTHLYVNAHLLARNI*TTVSQK
Trigger: TTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAG...CAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGTGTACCTTGCTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATTCCTTCACGGTGCCATaGGCCTTACAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SARSFEENVSLIKLNGENSFTVP*ALQISS
Trigger: AGAAGAAATCTGTAAGGCTCATGGCACCGTGAAGGA...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGAATGCACAGCCCCATTaGACAAAACTCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMNAQPH*TKLQQM
Trigger: CATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATT...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGACAAAACCAAAGGGCTaGAACTCATGTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLTKPKG*NSCLDN
Trigger: GTTGTCTAAACATGAGTTTCAGCCCTTTGGTTTTGT...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp ATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTGAGCAAGAAACTTTCACACTCTCTTGCGAATaGGTTTATTTCTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKVQGLTCRKCYLEQETFTLSCE*VYFYCW
Trigger: CCAACAGTAGAAATAAACTCATTCGCAAGAGAGTGT...GAAAGTTTCTTGCTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR GCA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTATCCTAGCCCAGTTCTaGATAATCACGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HKRPFCELLASAISSFKIILAQF*IITQLG
Trigger: TCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGAT...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp AAAATTAAAAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCAGGAAACATGAAACAATaGCTGACATGTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: KIKRMTGTCAVQGGREVSGNMKQ*LTCHLQ
Trigger: TTGTAAATGACATGTCAGCCATTGTTTCATGTTTCC...TGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR GCA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCTCAAAATCGATATATaGTTGATATTCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVLKIDI*LIFCQP
Trigger: AGGCTGGCAGAATATCAAGCATATATCGATTTTGAG...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR TCA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCT +
Preference number: 4 (lower is better)
Translates to: SARSFEENVSLIKLNGENRVSVF*TAISQS
Trigger: AGATTGGGATATAGCTGTTCAGAAAACTGAAACCCG...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTCATAATCACGCAGCTTaGATCACCACTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSHNHAA*ITTLIE
Trigger: TTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATG...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTTTCTCAGAAACAGCTTaGCAAAATCGGCATTGGACA +
Preference number: 4 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSFSETA*QNRHWT
Trigger: TGTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAA...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CCA 90 bp ACCCACTTCAAAACACATCTGTATGTGAATGCACATCTGAGTACCATTCAGCAAGGAAACATGAAACAATaGCTGACATGTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: THFKTHLYVNAHLSTIQQGNMKQ*LTCHLQ
Trigger: TTGTAAATGACATGTCAGCCATTGTTTCATGTTTCC...TTGCTGAATGGTACTCAGATGTGCATTCACATACAGATGTGTTTTGAAGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS CCA 90 bp TGGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCGGGCCAGGACATaGGGACCCGAGGACCTGAAAGACTGGAAGATGCCCGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: WRLYRRRGLGRRART*GPEDLKDWKMPAAH
Trigger: GTGGGCAGCGGGCATCTTCCAGTCTTTCAGGTCCTCGGGTCCCCATGTCCTGGCCCGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCGAGGAGCTGCAGCACTaGGGCGCTGCAGGGCACGAG +
Preference number: 5 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPEELQH*GAAGHE
Trigger: CTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCTC...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS TCA 90 bp GCTTCTAATGACTCTCGGGTCTTCCCGCGGCCGCCGAAGACCCGCTaGGGCAGAAGCTGCCCGCGGCGCGCGCCTTATCAAAAACCCGTT +
Preference number: 5 (lower is better)
Translates to: ASNDSRVFPRPPKTR*GRSCPRRAPYQKPV
Trigger: AACGGGTTTTTGATAAGGCGCGCGCCGCGGGCAGCTTCTGCCTCAGCGGGTCTTCGGCGGCCGCGGGAAGACCCGAGAGTCATTAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS GCA 90 bp CAGCCTCGGGTTCTGAAGCCGAGGTTTCGGCCGCAGTCGCCATCTTaGGCTTCTAATGACTCTCGGGTCTTCCCGCGGCCGCCGAAGACC +
Preference number: 5 (lower is better)
Translates to: QPRVLKPRFRPQSPS*ASNDSRVFPRPPKT
Trigger: GGTCTTCGGCGGCCGCGGGAAGACCCGAGAGTCATTAGAAGCGCAAGATGGCGACTGCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 90 bp CGCTCTCGCTCACGCCTTCCTCCTGCTGATCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGGCCACAGCCCGCGATAACACCTTCC +
Preference number: 5 (lower is better)
Translates to: RSRSRLPPADPTLAP*SCMSQRPQPAITPS
Trigger: GGAAGGTGTTATCGCGGGCTGTGGCCGCTGCGACATACAAGACCATGGGGCCAGCGTGGGATCAGCAGGAGGAAGGCGTGAGCGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546611.1
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS-3UTR CAA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATCTGTCGTGCAGCACCTaGGGCATGTCCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHLSCST*GMSLFR
Trigger: CCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAG...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCCCAGTGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: RSHLWLRARSTPGLSIPSARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...ACTGGGGATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGACGGTGATGCTGTCCTaGCTGCTGTCGTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPTVMLS*LLSCST
Trigger: GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGT...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ACCTCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGACGGTGATGCTGTCCTaGCTGCTGTCGTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TSPQASKSGLSFVSGSCMTVMLS*LLSCST
Trigger: GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGT...CATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS TCA 90 bp ATGGCGTACTCATCCCCATCGCTCTCGCTCACGCCTTCCTCCTGCTaGTCCCACGCTGGCCCCATGGTCTTGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: MAYSSPSLSLTPSSC*SHAGPMVLYVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGCGTGGGATCAGCAGGAGGAAGGCGTGAGCGAGAGCGATGGGGATGAGTACGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546611.1
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS CCA 90 bp CAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTaGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: QIRQELLSRKAGLQP*RLYRRRGLGRRART
Trigger: TGTCCTGGCCCGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCGGAAATCCCCACGGTaGCTGAAGATGGGTCGGATC +
Preference number: 5 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIRKSPR*LKMGRI
Trigger: GATCCGACCCATCTTCAGCAACCGTGGGGATTTCCG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCGGAAATCCCCACGGTaGCTGAAGATGGGTCGGATC +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSRKSPR*LKMGRI
Trigger: GATCCGACCCATCTTCAGCAACCGTGGGGATTTCCG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCTGTAGGGCAGGTTAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: LEEWPELRVRLLHAVGQVRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...AACCTGCCCTACAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGGCTGGCCCCATGGTCTaGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTAGPMV*YVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGC...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTGCTTCAGATACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLQILQGTSKGGPQLLQLRAILT*VSSPSS
Trigger: GCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCG...GAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CTCCACATCTACGGCAGCACATTTCCCAGCGGGCCCTGCTGCTACTTCTACATTGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: LHIYGSTFPSGPCCYFYIARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...AATGTAGAAGTAGCAGCAGGGCCCGCTGGGAAATGTGCTGCCGTAGATGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS GCA 90 bp CACTTACGCTCCGTATGTCTGCGGCAAAAGCATGGGGCCACCTGGTaGCTTCCTGGTCTCCGGCTTCTCTGGAACTTTCCTCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: HLRSVCLRQKHGATW*LPGLRLLWNFPLRR
Trigger: CCTCCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGTAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp TCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGCTGAGCCTTTTCTTCTTCTaGCTGCACAAGGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SPQASKSGLSFVSGSCMLSLFFF*LHKGCF
Trigger: GAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGCT...CAGCATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCTGAGATGAACAGCTaGTGTTTCTCTAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSPEMNS*CFSREV
Trigger: CACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGG...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGCGTAGGCCAGGCCCTTaGGTTTGCCAGCCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: TPCLSMAKRYRLHKATVQRRPGP*VCQPGW
Trigger: CCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTACG...CTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTTGGCAAAATCGGCATaGGACATCTTGGGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PGAEPSGSAGCHHELFPGLAKSA*DILGAS
Trigger: CGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAA...ACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGAGCGGGTTTGCAGCCTaGGCGGCTTTATCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: STQIRQELLSRKAGLQPWSGFAA*AALSPP
Trigger: CGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCT...CCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS TCA 90 bp AGAGGTCATACACGTGCTCTCTGTCCAGGCCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACTCCAGCCAGAGCTCTTCAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RGHTRALCPGHPGPC*SRHAATPARALQSR
Trigger: CCTTGACTGAAGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGTGTATGACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS TCA 90 bp AGAGGTCATACACGTGCTCTCTGTCCAGGCCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACTCCAGCCAGAGCTCTTGGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: RGHTRALCPGHPGPC*SRHAATPARALGKL
Trigger: GAGCTTACCAAGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGTGTATGACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552221.1
CDS CCA 90 bp AAGCACTTACGCTCCGTATGTCTGCGGCAAAAGCATGGGGCCACCTaGTGCCTTCCTGGTCTCCGGCTTCTCTGGAACTTTCCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KHLRSVCLRQKHGAT*CLPGLRLLWNFPLR
Trigger: CCTCAGAGGAAAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGTAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp GGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GTSKGGPQLLQLFTGVLFRAILT*VSSPSS
Trigger: GCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCG...AAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCCACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: KPRSHLWLRARSTPGLSIHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TGGGTAGTCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: WVVTGALDGPVQSLPAVLFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...CAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGACTACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCATCAGCCTTTTCTTCTTCTaGCTGCACAAGGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KPRSHLWLRARSTPGLSISLFFF*LHKGCF
Trigger: GAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGCT...GATGGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CCACACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCGTAGGCCAGGCCCTTaGGTTTGCCAGCCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: PHRGKQTLASLLHFSGPSRRPGP*VCQPGW
Trigger: CCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTACG...AGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACGAGGAGCTGCAGCACTaGGGCGCTGCAGGGCACGAG +
Preference number: 5 (lower is better)
Translates to: WKRSVIQKGAGAGQKHLDEELQH*GAAGHE
Trigger: CTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCTC...GTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAGAGGAGCTGCAGCACTaGGGCGCTGCAGGGCACGAG +
Preference number: 5 (lower is better)
Translates to: TSKGGPQLLQLFTGVLFEEELQH*GAAGHE
Trigger: CTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCTC...TTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TCTAGCCACATGTTGGCGTACTTGGCATTTCCTCTGGTCATGATGCTATCCCAGGAGGAGCTGCAGCACTaGGGCGCTGCAGGGCACGAG +
Preference number: 5 (lower is better)
Translates to: SSHMLAYLAFPLVMMLSQEELQH*GAAGHE
Trigger: CTCGTGCCCTGCAGCGCCCAAGTGCTGCAGCTCCTC...CTGGGATAGCATCATGACCAGAGGAAATGCCAAGTACGCCAACATGTGGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCTCGGCATTGGACATCTaGGGTGCCTCGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGSALDI*GASVAA
Trigger: AGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGA...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCACTGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCATTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SLVHWTARCRAFRQCWVSFLRNS*AKSALD
Trigger: GTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAA...TGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS CCA 90 bp GCTTTCTCAAAGAGGTCATACACGTGCTCTCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCATGCAGCCACTCCAGCCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: AFSKRSYTCSLSRPS*AMLISSCSHSSQSS
Trigger: AGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGTGTATGACCTCTTTGAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000552221.1
ENST00000651280.1
CDS CCA 90 bp TCTACCATGCAAGCACTTACGCTCCGTATGTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCCTGGTCTCCGGCTTCTCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: STMQALTLRMSAAKA*GHLVPSWSPASLEL
Trigger: AAGTTCCAGAGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGTAAGTGCTTGCATGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp ACAGGGGGAAACAAACATTGGCCTCCCTTCTACACTTTTCCGGTCCATCTCCAGCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TGGNKHWPPFYTFPVHLQRAILT*VSSPSS
Trigger: GCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCG...CTGGAGATGGACCGGAAAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCCAGAGGGCGAGTCCTTaGGTCATATGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSQRASP*VICKPT
Trigger: TGTTGGTTTACATATGACCAAAGGACTCGCCCTCTG...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TGGTGCACTGGACGGCCCGGTGCAGAGCCTTCCGGCAGTGCTGGGTGTCACCATTTACTGACTCTGGTATaGGGTCTTCTGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: WCTGRPGAEPSGSAGCHHLLTLV*GLLTIL
Trigger: AAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAA...ATGGTGACACCCAGCACTGCCGGAAGGCTCTGCACCGGGCCGTCCAGTGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRDILPA*VPLPAT
Trigger: TGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCGCTTTCTGCATGTTATaGCACAGTCGAGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSAFCML*HSRASI
Trigger: GATTGAGGCTCGACTGTGCAATAACATGCAGAAAGC...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AGCCTTCCGGCAGTGCTGGGTGTCACCATGAGCTCTTTCCAGGTTGTAATACTCACGGTGATGCTGTCCTaGCTGCTGTCGTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: SLPAVLGVTMSSFQVVILTVMLS*LLSCST
Trigger: GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGT...GAGTATTACAACCTGGAAAGAGCTCATGGTGACACCCAGCACTGCCGGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: IADFPQTHPHKRPFCELLARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGCGTAGGCCAGGCCCTTaGGTTTGCCAGCCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: QFCYLLLIPNQRTAQLMWRRPGP*VCQPGW
Trigger: CCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTACG...CCACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS GCA 90 bp ACGTGCTCTCTGTCCAGGCCATCCTGGGCCATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGCTCTTCAGTCAAGGGAAAGATTTCA +
Preference number: 5 (lower is better)
Translates to: TCSLSRPSWAMLISS*SHSSQSSSVKGKIS
Trigger: TGAAATCTTTCCCTTGACTGAAGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS CCA 90 bp TCCAGCCAGAGCTCTTCAGTCAAGGGAAAGATTTCACTCATCTTCTaGCGGGCCATCCTCACCTTGGTAAGCTCCCCTTCCAGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSQSSSVKGKISLIF*RAILTLVSSPSSLS
Trigger: GCTCAGGCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAATCTTTCCCTTGACTGAAGAGCTCTGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAGCTGGCCCCATGGTCTaGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: QTHPHKRPFCELLASAISAGPMV*YVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGC...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCCTGTCGTGCAGCACCTaGGGCATGTCCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGLSCST*GMSLFR
Trigger: CCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAG...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGTGGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAGATTTCTGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: MWIIARAVDWHTHGYEISARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...AGAAATCTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp ACCTCCCCACAGGCCTCGAAGAGTGGCCTGAGCTTCGTGTCCGGCTCCTGCATGTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: TSPQASKSGLSFVSGSCMLMMFS*IVMPSI
Trigger: GATGGACGGCATGACTATCAAAGAGAACATCATCAA...CATGCAGGAGCCGGACACGAAGCTCAGGCCACTCTTCGAGGCCTGTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGTTGGCAAAATCGGCATaGGACATCTTGGGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRLAKSA*DILGAS
Trigger: CGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAA...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCGCTGGCCAGAAACATTaGGACAACTGTGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSAGQKH*DNCVSK
Trigger: TTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCAGCGTCCCGAAATGCACAGCCCCATaGAACAAAACTCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: GGPPGQSEVRHFLSPSVPKCTAP*NKTPAN
Trigger: ATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATTT...CGGGACGCTGGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTGGGTCACTGCCTAGGCTaGCATCCTGCTCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: AILLSPPHPKPANSTAYVGHCLG*HPALDA
Trigger: GGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTGACC...CACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTGCTGGCCCCATGGTCTaGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSAGPMV*YVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGC...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: AKRYRLHKATVQGQFLIADILPA*VPLPAT
Trigger: TGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...CGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SKARVKAALNSSSSLLESGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...AGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATATCGGCATTGGACATCTaGGGTGCCTCGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: MAKRYRLHKATVQGQFLISALDI*GASVAA
Trigger: AGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGA...TATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCGGCATTGGACATCTaGGGTGCCTCGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: EVSYKKGPELARNIWTTVSALDI*GASVAA
Trigger: AGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGA...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTCCTGCTCTGGACGCCTaGCTCCAGTGGAACCACAGT +
Preference number: 5 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCPALDA*LQWNHS
Trigger: ACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGG...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp AAATTACTTGATGATCAACTCCATGTCTCTCCATGGCCAAGAGGTACCGACTCCGCTGGCCCCATGGTCTaGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: KLLDDQLHVSPWPRGTDSAGPMV*YVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGC...GGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAACGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKRAILT*VSSPSS
Trigger: GCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCG...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTCAGAGGGCGAGTCCTTaGGTCATATGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPQRASP*VICKPT
Trigger: TGTTGGTTTACATATGACCAAAGGACTCGCCCTCTG...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCCTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTGCTTTCTGCATGTTATaGCACAGTCGAGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPAFCML*HSRASI
Trigger: GATTGAGGCTCGACTGTGCAATAACATGCAGAAAGC...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: RAHVLCRVEEKCHTKRGRYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...CCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ACTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTCGGAAATCCCCACGGTaGCTGAAGATGGGTCGGATC +
Preference number: 5 (lower is better)
Translates to: TLIETLFHLLLQILQGTSRKSPR*LKMGRI
Trigger: GATCCGACCCATCTTCAGCAACCGTGGGGATTTCCG...ACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CTCTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTACGGAAATCCCCACGGTaGCTGAAGATGGGTCGGATC +
Preference number: 5 (lower is better)
Translates to: LSLKRSSTSCFRYSKARVRKSPR*LKMGRI
Trigger: GATCCGACCCATCTTCAGCAACCGTGGGGATTTCCG...TACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCGGCTTTTCACGAAAAGCGGGTTaGCAGCCTTGGCGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: KSDRSYCHEKRVCSLGGFSRKAG*QPWRLY
Trigger: ATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGA...AAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 90 bp TTTCTTTTGAGAAGGGTTCTTGCTGTCACCCTGGCTGGAGTGTGGTaGTGTGATCACAACTCACTACAGCCTCACACTCCAGGCTCATGC +
Preference number: 5 (lower is better)
Translates to: FLLRRVLAVTLAGVW*CDHNSLQPHTPGSC
Trigger: GCATGAGCCTGGAGTGTGAGGCTGTAGTGAGTTGTGATCACACCACCACACTCCAGCCAGGGTGACAGCAAGAACCCTTCTCAAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551416.1
CDS-3UTR CAA 90 bp CTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGCCTGTCCGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: LKPRSHLWLRARSTPGLSGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...GGACAGGCCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTGATTACCACAAGGAGGGGGAAACAAACATaGGCCTCCCTTCTACACTTT +
Preference number: 5 (lower is better)
Translates to: CILLWTPCSSGTTVITTRRGKQT*ASLLHF
Trigger: AAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCT...CCTTGTGGTAATCACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp TGGGTGGTGGGAGGTCCGCCGGGCCAGAGTGAAGTAAGGCATTTCCTGTCTCCCTTGCTGATTGCCACTTaGATGATGTTCTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: WVVGGPPGQSEVRHFLSPLLIAT*MMFSLI
Trigger: TATCAAAGAGAACATCATCAAAGTGGCAATCAGCAA...GGGAGACAGGAAATGCCTTACTTCACTCTGGCCCGGCGGACCTCCCACCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGCAGCACACCAGGTTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGAC +
Preference number: 5 (lower is better)
Translates to: FLSKAEEPSVVASTQHTRFLRNS*AKSALD
Trigger: GTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAA...CCTGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCATCGCCCCACTCTTTCTCATCATCCTCATCTGCTCCGCGCTTCTCTGGGCCTGCTGGCCAGAAACATTaGGACAACTGTGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SSPHSFSSSSSAPRFSGPAGQKH*DNCVSK
Trigger: TTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC...AGGCCCAGAGAAGCGCGGAGCAGATGAGGATGATGAGAAAGAGTGGGGCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS CCA 90 bp TCGCACTTTCAAACTCTCGGTAAGCCTCCCAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAGACGAGAGAGCCCTTTCAAACACGG +
Preference number: 5 (lower is better)
Translates to: SHFQTLGKPPRGRVL*SYVNQQTREPFQTR
Trigger: CCGTGTTTGAAAGGGCTCTCTCGTCTGTTGGTTTACATATGACCAAAGGACTCGCCCTCTGGGAGGCTTACCGAGAGTTTGAAAGTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGCAGAGGGCGAGTCCTTaGGTCATATGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: KRYRLHKATVQGQFLIARQRASP*VICKPT
Trigger: TGTTGGTTTACATATGACCAAAGGACTCGCCCTCTG...CCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCAGCCTTTTCTTCTTCTaGCTGCACAAGGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLSLFFF*LHKGCF
Trigger: GAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGCT...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCTGTCGTGCAGCACCTaGGGCATGTCCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLLSCST*GMSLFR
Trigger: CCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCACGGTGATGCTGTCCTaGCTGCTGTCGTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLTVMLS*LLSCST
Trigger: GGTGCTGCACGACAGCAGCAAGGACAGCATCACCGT...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTCGTAGGCCAGGCCCTTaGGTTTGCCAGCCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASRRPGP*VCQPGW
Trigger: CCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTACG...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACTCGGCATTGGACATCTaGGGTGCCTCGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHSALDI*GASVAA
Trigger: AGCAGCCACCGAGGCACCCAAGATGTCCAATGCCGA...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACCCCAGGAGCCATCTGTGGTaGCGAGCACGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: IEQNSSKCFIADFPQTHPRSHLW*RARSTP
Trigger: TGGTGTGCTGCGTGCTCGCAACCACAGATGGCTCCT...GGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCTCCTCAGGTAATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACT +
Preference number: 5 (lower is better)
Translates to: SPQVIKVCLPNLHIISGLDILPA*VPLPAT
Trigger: AGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...CAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547528.5
CDS TCA 90 bp AGAGCCCTTTCAAACACGGAGCGAACTTTCTCAAGGCCACCTTTCTaGCCAATCCCACCAACTGAGTACTGGCCATACTCTAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: RALSNTERTFSRPPF*PIPPTEYWPYSSQM
Trigger: CATTTGGCTAGAGTATGGCCAGTACTCAGTTGGTGGGATTGGTCAGAAAGGTGGCCTTGAGAAAGTTCGCTCCGTGTTTGAAAGGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS TCA 90 bp GCAATGTTAAGAGACATTTCTGGTTGTCATGTTTGGTTGTGGTGGTaGAGCTGCTACTGGCATTTCAGGGCTAGAAGCCAGGGATGCCCC +
Preference number: 5 (lower is better)
Translates to: AMLRDISGCHVWLWW*SCYWHFRARSQGCP
Trigger: GGGGCATCCCTGGCTTCTAGCCCTGAAATGCCAGTAGCAGCTTCACCACCACAACCAAACATGACAACCAGAAATGTCTCTTAACATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS GCA 90 bp GAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTAAAGTaGATCAGCAGGCTGTTAGGAGACCTGAACCTTATGACGTCGACA +
Preference number: 5 (lower is better)
Translates to: EFPSFLHVIAQSSLK*ISRLLGDLNLMTST
Trigger: TGTCGACGTCATAAGGTTCAGGTCTCCTAACAGCCTGCTGATGCACTTTAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546808.5
CDS-3UTR CAA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLRAILT*VSSPSS
Trigger: GCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCG...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCTTACTGACTCTGGTATaGGGTCTTCTGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGALLTLV*GLLTIL
Trigger: AAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAA...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTTACTGACTCTGGTATaGGGTCTTCTGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: YSKARVKAALNSSSSLLELLTLV*GLLTIL
Trigger: AAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAA...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TACTCCAAGGCACGAGTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: YSKARVKAALNSSSSLLELLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...CTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTACTCGTGCCTTGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATGAAGCCGGCATTCACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: KVCLPNLHIISGLDEAGIHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...AATGCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CGAGCCTCAATCCTAGCCCAGTTCTGCATAATCACGCAGCTTGGATCACCACTCTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RASILAQFCIITQLGSPLCYFYI*CFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCA...GAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCTAGGATTGAGGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCAGGGGGAAACAAACATaGGCCTCCCTTCTACACTTT +
Preference number: 5 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGRGKQT*ASLLHF
Trigger: AAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCT...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGALMMFS*IVMPSI
Trigger: GATGGACGGCATGACTATCAAAGAGAACATCATCAA...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CACTGCCTAGGCTTGCATCCTGCTCTGGACGCCTTGCTCCAGTGGAACCACAGTTTGCTGATTGCCACTTaGATGATGTTCTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: HCLGLHPALDALLQWNHSLLIAT*MMFSLI
Trigger: TATCAAAGAGAACATCATCAAAGTGGCAATCAGCAA...ACTGTGGTTCCACTGGAGCAAGGCGTCCAGAGCAGGATGCAAGCCTAGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCATCCTTTACTTTCAGTaGTCGATCTGTAACGGATCC +
Preference number: 5 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAILYFQ*SICNGS
Trigger: GGATCCGTTACAGATCGACAACTGAAAGTAAAGGAT...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546728.5
CDS-3UTR CAA 90 bp AAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTGGCGGCTTTGCAGGAAGTGTTATCTaGAGCAAGAAACTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KSDRSYCHEKRVCSLGGFAGSVI*SKKLSS
Trigger: GGAGGAAAGTTTCTTGCTCAAGATAACACTTCCTGC...AAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 90 bp TACTGGAGTCAGAAATTACTTGATGATCAACTCCATGTCTCTCCATaGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: YWSQKLLDDQLHVSP*PRGTDSIRQLSRGS
Trigger: ACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCATGGAGAGACATGGAGTTGATCATCAAGTAATTTCTGACTCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431469.6
CDS-3UTR CAA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFDILPA*VPLPAT
Trigger: TGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AACCCCTTCCCCTTTCTGTCTAAAGCCGAGGAGCCATCTGTGGTTGCGAGCACGGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: NPFPFLSKAEEPSVVASTGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...CGTGCTCGCAACCACAGATGGCTCCTCGGCTTTAGACAGAAAGGGGAAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCATCCACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: FGRLLFFIIAPLFLIILIHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...GATGAGGATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: EVSYKKGPELARNIWTTVYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...CACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GATGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTGCACAGTCGAGCCTCTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: DAIPEFPSFLHVIAQSSLFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...GAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCTTCATTCTCTGCTCATaGACACGAGCTAATCGGGTT +
Preference number: 5 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGFILCS*TRANRV
Trigger: AACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTGCTGGCCAGAAACATTaGGACAACTGTGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSAGQKH*DNCVSK
Trigger: TTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCGCTAAATGGGGAGAATaGAAGTTTGCATTTGACATG +
Preference number: 5 (lower is better)
Translates to: MCCAGWKRSVIQKGAGAGAKWGE*KFAFDM
Trigger: CATGTCAAATGCAAACTTCAATTCTCCCCATTTAGC...GCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCCAGATAAATGAGGAGTaGATTCCCACGACATATACA +
Preference number: 5 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGAQINEE*IPTTYT
Trigger: TGTATATGTCGTGGGAATCAACTCCTCATTTATCTG...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546815.6
CDS TCA 90 bp AATCAAGGTATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTTTCTCGAAGGTTACTGGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: NQGMPAKSPHNQWPG*SRHSKLSRRLLELE
Trigger: CTCCAACTCCAGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548077.1
CDS TCA 90 bp CCTCTCCAAGCTCCTTTGTTGGATAGATGTTGTACTAGAGCACAGTaGCTCTCAAAGGAGGGATCCTGCCCATCAAGAGACATTTGGCAA +
Preference number: 5 (lower is better)
Translates to: PLQAPLLDRCCTRAQ*LSKEGSCPSRDIWQ
Trigger: TTGCCAAATGTCTCTTGATGGGCAGGATCCCTCCTTTGAGAGTCACTGTGCTCTAGTACAACATCTATCCAACAAAGGAGCTTGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS-3UTR CAA 90 bp GTCGAGAGGGTGAGAGAAATTAAGAAATTCTTACAAGCACATACAAGAGTTGAAGCTGGCCCCATGGTCTaGTATGTCGCAGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: VERVREIKKFLQAHTRVEAGPMV*YVAAAT
Trigger: TGTGGCCGCTGCGACATACAAGACCATGGGGCCAGC...TTCAACTCTTGTATGTGCTTGTAAGAATTTCTTAATTTCTCTCACCCTCTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp AAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGCGCGGCTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: KRYRLHKATVQGQFLIARLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...CCGCGCTATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ACTGGAGTCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATGCCTGGGATCACCACTCTCATaGAAACGCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: TGVLFEINPSPQVIKVCLGSPLS*KRSSTS
Trigger: GGAGGTGGAAGAGCGTTTCAATGAGAGTGGTGATCC...CAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGACTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAAGCTTTCTGCATGTTATaGCACAGTCGAGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQAFCML*HSRASI
Trigger: GATTGAGGCTCGACTGTGCAATAACATGCAGAAAGC...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GTAAAGGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCAGCTTTCTGCATGTTATaGCACAGTCGAGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: VKAALNSSSSLLESCLKSAFCML*HSRASI
Trigger: GATTGAGGCTCGACTGTGCAATAACATGCAGAAAGC...TGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAACACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TTTGGAAGGCTGCTCTTCTTCATCATCGCCCCACTCTTTCTCATCATCCTCATCTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: FGRLLFFIIAPLFLIILIYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...GATGAGGATGATGAGAAAGAGTGGGGCGATGATGAAGAAGAGCAGCCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAAGCCTTTTCTTCTTCTaGCTGCACAAGGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKSLFFF*LHKGCF
Trigger: GAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGCT...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTCATTGAAACGCTCTTCCACCTCCTGCTTCAGATACTCCAAGGCACGAGTAAAAGGGGGAAACAAACATaGGCCTCCCTTCTACACTTT +
Preference number: 5 (lower is better)
Translates to: LIETLFHLLLQILQGTSKRGKQT*ASLLHF
Trigger: AAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCT...TTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTTTCAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp TCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAACCTGAGATGAACAGCTaGTGTTTCTCTAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SYKKGPELARNIWTTVSQPEMNS*CFSREV
Trigger: CACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGG...TTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTGCCAGGCCCTTTGGTTaGCCAGCCCGGTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSARPFG*PARLVT
Trigger: GGTCACCAACCGGGCTGGCAAACCAAAGGGCCTGGC...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTCGTAGGCCAGGCCCTTaGGTTTGCCAGCCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: HKRPFCELLASAISSFKIRRPGP*VCQPGW
Trigger: CCAACCGGGCTGGCAAACCAAAGGGCCTGGCCTACG...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GAGTGGTCACTTTTCTGCCACTGCCCTCAATATGAGGGAGCACTGAAAGGCTCTTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: EWSLFCHCPQYEGALKGSLMMFS*IVMPSI
Trigger: GATGGACGGCATGACTATCAAAGAGAACATCATCAA...AGAGCCTTTCAGTGCTCCCTCATATTGAGGGCAGTGGCAGAAAAGTGACCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CATCTTCATCACAGCCTGCGACGCCTGGGATTCATTTTCATACTCCACGTAGGCTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: HLHHSLRRLGFIFILHVGLMMFS*IVMPSI
Trigger: GATGGACGGCATGACTATCAAAGAGAACATCATCAA...GCCTACGTGGAGTATGAAAATGAATCCCAGGCGTCGCAGGCTGTGATGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAGGGGCCTTGCTGATTGCCACTTaGATGATGTTCTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: DGHMCCAGWKRSVIQKGALLIAT*MMFSLI
Trigger: TATCAAAGAGAACATCATCAAAGTGGCAATCAGCAA...GGCCCCTTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TTTGTGTTTCTCCAGCTGCAGGGATGCTGTTCTCGACCCTTCTGCGTTTGGAAGAAATGCACAGCCCCATaGAACAAAACTCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: FVFLQLQGCCSRPFCVWKKCTAP*NKTPAN
Trigger: ATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATTT...CTTCCAAACGCAGAAGGGTCGAGAACAGCATCCCTGCAGCTGGAGAAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGTGGATCATAGCTAGGGCCGTAGACTGGCACACACATGGGTATGAGATTTCTAATGACAAGTGTAAATaGGCCAGTACCAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: MWIIARAVDWHTHGYEISNDKCK*ASTRQR
Trigger: CCTCTGCCTGGTACTGGCCAATTTACACTTGTCATT...AGAAATCTCATACCCATGTGTGTGCCAGTCTACGGCCCTAGCTATGATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS GCA 90 bp AATACCTTGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATaGCTGCCAAATCTCCACATAATCAGTGGCCTGGATGAAGCCGGC +
Preference number: 5 (lower is better)
Translates to: NTLFEINPSPQVIKV*LPNLHIISGLDEAG
Trigger: GCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548119.1
CDS-3UTR CAA 90 bp ATAGCTGACTTCCCTCAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTATTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: IADFPQTHPHKRPFCELLLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...TAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGGGCGCGCTCAAAGATCAACTGAATGCGAGCAGGATCGCCAATTTTCATCTCCTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: QGALKDQLNASRIANFHLLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...GAGATGAAAATTGGCGATCCTGCTCGCATTCAGTTGATCTTTGAGCGCGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQCYFYI*CFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCA...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGCTGTCGTGCAGCACCTaGGGCATGTCCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMLSCST*GMSLFR
Trigger: CCTGAAGAGGGACATGCCCAAGGTGCTGCACGACAG...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AAGAATGACGGGCACATGTGCTGTGCAGGGTGGAAGAGAAGTGTCATACAAAAAAGGGGGAAACAAACATaGGCCTCCCTTCTACACTTT +
Preference number: 5 (lower is better)
Translates to: KNDGHMCCAGWKRSVIQKRGKQT*ASLLHF
Trigger: AAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCT...TTTTTGTATGACACTTCTCTTCCACCCTGCACAGCACATGTGCCCGTCATTCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GGAACCACAGTGATTACCACAAGGAACAGCACATCTTGGCTTTTCTGTCCTAACCCTGAGATGAACAGCTaGTGTTTCTCTAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GTTVITTRNSTSWLFCPNPEMNS*CFSREV
Trigger: CACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGG...GTTAGGACAGAAAAGCCAAGATGTGCTGTTCCTTGTGGTAATCACTGTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp GGCAATTCTGCTATCTCCTCCTCATCCCAAACCAGCGAACAGCACAGCTTATGTTTGATGATGTTCTCTTaGATAGTCATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: GNSAISSSSQTSEQHSLCLMMFS*IVMPSI
Trigger: GATGGACGGCATGACTATCAAAGAGAACATCATCAA...ACATAAGCTGTGCTGTTCGCTGGTTTGGGATGAGGAGGAGATAGCAGAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS-3UTR CAA 90 bp TCCTTCTCTGCAGCCTTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCATTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SFSAAFILCSLTRANRVSFLRNS*AKSALD
Trigger: GTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAA...TGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAAGGCTGCAGAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAAAATGCACAGCCCCATaGAACAAAACTCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: QTHPHKRPFCELLASAISKCTAP*NKTPAN
Trigger: ATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATTT...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGGGGATAGATAACAGGGCTTCCTTCACAGGGTCGTGGCGAGGATTCAATGAGCAAAAACCCGTTTTCTaGCCATTGAAAGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: MGIDNRASFTGSWRGFNEQKPVF*PLKEKL
Trigger: CAGTTTCTCTTTCAATGGCAAGAAAACGGGTTTTTG...CTCATTGAATCCTCGCCACGACCCTGTGAAGGAAGCCCTGTTATCTATCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp ATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCCAGAGGGCGAGTCCTTaGGTCATATGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: IWTTVSQKQCVLVSLLCLQRASP*VICKPT
Trigger: TGTTGGTTTACATATGACCAAAGGACTCGCCCTCTG...GAGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCAGAGGGCGAGTCCTTaGGTCATATGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPQRASP*VICKPT
Trigger: TGTTGGTTTACATATGACCAAAGGACTCGCCCTCTG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GCCGGAGCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTTTACTGACTCTGGTATaGGGTCTTCTGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: AGAGQKHLDNCVSKTVCSLLTLV*GLLTIL
Trigger: AAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAA...AGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGCTCCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GGCGGCCCTCAACTCCTCCAGCTCTTTACTGGAGTCTTGTTTGAAATCAACCCTGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: GGPQLLQLFTGVLFEINPGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...AGGGTTGATTTCAAACAAGACTCCAGTAAAGAGCTGGAGGAGTTGAGGGCCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGAGAAGTGTCATACAAAAAGGGGCCGGAGCTGGCCAGAAACATTTGGACAATTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: EEKCHTKRGRSWPETFGQLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...TTGTCCAAATGTTTCTGGCCAGCTCCGGCCCCTTTTTGTATGACACTTCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CTCTGGAACTTTCCTCTGAGGAGGGTTGCTGATTGCCACTTTGATGATGTTCTCTTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LWNFPLRRVADCHFDDVLLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...GAGAACATCATCAAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CCCATTGAACAAAACTCCAGCAAATGTTTTATAGCTGACTTCCCTCAGACCCACAGGGGGAAACAAACATaGGCCTCCCTTCTACACTTT +
Preference number: 5 (lower is better)
Translates to: PIEQNSSKCFIADFPQTHRGKQT*ASLLHF
Trigger: AAAGTGTAGAAGGGAGGCCAATGTTTGTTTCCCCCT...GTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGGAGTTTTGTTCAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGACCCACCCCCACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCAGCTAAATGGGGAGAATaGAAGTTTGCATTTGACATG +
Preference number: 5 (lower is better)
Translates to: QTHPHKRPFCELLASAISAKWGE*KFAFDM
Trigger: CATGTCAAATGCAAACTTCAATTCTCCCCATTTAGC...TGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTGGGGGTGGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS CCA 90 bp GATCCTGCCCATCAAGAGACATTTGGCAATGTTAAGAGACATTTCTaGTTGTCATGTTTGGTTGTGGTGGTGAAGCTGCTACTGGCATTT +
Preference number: 5 (lower is better)
Translates to: DPAHQETFGNVKRHF*LSCLVVVVKLLLAF
Trigger: AAATGCCAGTAGCAGCTTCACCACCACAACCAAACATGACAACCAGAAATGTCTCTTAACATTGCCAAATGTCTCTTGATGGGCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS-3UTR CAA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGGATATTCTGCCAGCCTaGGTGCCTCTGCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMDILPA*VPLPAT
Trigger: TGTTGCAGGCAGAGGCACCAAGGCTGGCAGAATATC...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATGGCCAAGAGGTACCGACTCCATAAGGCAACTGTCCAGGGGCAGTTTCTAATAGGTTACAGAAATTACTaGATGATCAACTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: MAKRYRLHKATVQGQFLIGYRNY*MINSMS
Trigger: AGACATGGAGTTGATCATCAAGTAATTTCTGTAACC...TATTAGAAACTGCCCCTGGACAGTTGCCTTATGGAGTCGGTACCTCTTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp GTCCAGGGGCAGTTTCTAATAGCGCGGTTATGTACAGATAAAACCAAATCCTTTTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: VQGQFLIARLCTDKTKSFYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...AAAGGATTTGGTTTTATCTGTACATAACCGCGCTATTAGAAACTGCCCCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGAGCCTTTTCTTCTTCTaGCTGCACAAGGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLSLFFF*LHKGCF
Trigger: GAAGCAGCCCTTGTGCAGCAAGAAGAAGAAAAGGCT...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GCTGGCCAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCTTTCTCAGAAACAGCTaGGCAAAATCGGCATTGGAC +
Preference number: 5 (lower is better)
Translates to: AGQKHLDNCVSKTVCSRFFLRNS*AKSALD
Trigger: GTCCAATGCCGATTTTGCCAAGCTGTTTCTGAGAAA...GAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTGGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GAAGCCGGCATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACCCTGAGATGAACAGCTaGTGTTTCTCTAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: EAGIQSFLEGYRNYLMINPEMNS*CFSREV
Trigger: CACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGG...GTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS-3UTR CAA 90 bp CATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCCTCTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: HLDNCVSKTVCSRFASVPLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...AGGCACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAATTTTCATCTCAAAATCGATATATGCTTGATATTCTGCCAGCCTTGGTGCCTTACTCTAGCCACATGTaGGCGTACTTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: QFSSQNRYMLDILPALVPYSSHM*AYLAFP
Trigger: AGGAAATGCCAAGTACGCCAACATGTGGCTAGAGTA...AGGCACCAAGGCTGGCAGAATATCAAGCATATATCGATTTTGAGATGAAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLCYFYI*CFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCA...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTTTGGCAAAATCGGCATaGGACATCTTGGGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: HKRPFCELLASAISSFKILAKSA*DILGAS
Trigger: CGAGGCACCCAAGATGTCCAATGCCGATTTTGCCAA...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS TCA 90 bp TTCATTCTCTGCTCATTGACACGAGCTAATCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCTTCTAAAGAACCTCCAGAAGAGATC +
Preference number: 5 (lower is better)
Translates to: FILCSLTRANRVSVF*TAISQSSKEPPEEI
Trigger: GATCTCTTCTGGAGGTTCTTTAGAAGATTGGGATATAGCTGTTCAGAAAACTGAAACCCGATTAGCTCGTGTCAATGAGCAGAGAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS CCA 90 bp TACCTAGTCTACATCATTTGCCCAATCACAATGTATCTGGGGAACTaGGACATCTCGCCAAAAGTTGTATTAAGAACATGTTCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: YLVYIICPITMYLGN*DISPKVVLRTCSAL
Trigger: TAGAGCTGAACATGTTCTTAATACAACTTTTGGCGAGATGTCCCAGTTCCCCAGATACATTGTGATTGGGCAAATGATGTAGACTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548119.1
CDS-3UTR CAA 90 bp AAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTGTTACTGGAGTCTTGTTaGAAATCAACCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KHLDNCVSKTVCSRFASVLLESC*KSTLLL
Trigger: GAGGAGAAGGGTTGATTTCAAACAAGACTCCAGTAA...CACAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp TCAGCAAGAAGTTTTGAAGAGAACGTCAGTTTAATAAAGCTAAATGGGGAGAATCACATGTTGGCGTACTaGGCATTTCCTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: SARSFEENVSLIKLNGENHMLAY*AFPLVM
Trigger: CATGACCAGAGGAAATGCCAAGTACGCCAACATGTG...ATTCTCCCCATTTAGCTTTATTAAACTGACGTTCTCTTCAAAACTTCTTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp GCTAGAACTGAGGCCTTAACCTCCAGAACCAGAAACCTTTCCATTTCTATTATCAGTTTATTTCTACTGTaGGACGTGTGGTTAAGAGTG +
Preference number: 5 (lower is better)
Translates to: ARTEALTSRTRNLSISIISLFLL*DVWLRV
Trigger: CACTCTTAACCACACGTCCAACAGTAGAAATAAACT...GATAATAGAAATGGAAAGGTTTCTGGTTCTGGAGGTTAAGGCCTCAGTTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp TTCTGGAATGGGATCAAAGTACAAGGCCTGACTTGCAGGAAGTGTTATCTTGAGTATATTATGCAGAAATaGTTGCTCCCAATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FWNGIKVQGLTCRKCYLEYIMQK*LLPICR
Trigger: TCTGCAGATTGGGAGCAACAATTTCTGCATAATATA...CTCAAGATAACACTTCCTGCAAGTCAGGCCTTGTACTTTGATCCCATTCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS-3UTR CAA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTCTCTTTACTGGAGTCTaGTTTGAAATCAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASLFTGV*FEINPS
Trigger: AGAAGGGTTGATTTCAAACAAGACTCCAGTAAAGAG...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAAAGAAAACAGTCCACAGCAGGTGGCACAAATAATTCCTATACAAAACAAATGTGCTACTTCTACATTTaGTGTTTCTCCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QRKQSTAGGTNNSYTKQMCYFYI*CFSSCR
Trigger: CCTGCAGCTGGAGAAACACAAAATGTAGAAGTAGCA...CATTTGTTTTGTATAGGAATTATTTGTGCCACCTGCTGTGGACTGTTTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CACAAGAGGCCATTCTGTGAATTACTAGCATCTGCCATTTCATCTTTTAAAATTCCTGAGATGAACAGCTaGTGTTTCTCTAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: HKRPFCELLASAISSFKIPEMNS*CFSREV
Trigger: CACTTCCCTAGAGAAACACAAGCTGTTCATCTCAGG...AATTTTAAAAGATGAAATGGCAGATGCTAGTAATTCACAGAATGGCCTCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp CAGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGCTAAATGGGGAGAATaGAAGTTTGCATTTGACATG +
Preference number: 5 (lower is better)
Translates to: QKHLDNCVSKTVCSRFASAKWGE*KFAFDM
Trigger: CATGTCAAATGCAAACTTCAATTCTCCCCATTTAGC...AGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp AGAAACATTTGGACAACTGTGTCTCAAAAACAGTGTGTTCTCGTTTCGCTTCTGTTGCTGATTGCCACTTaGATGATGTTCTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: RNIWTTVSQKQCVLVSLLLLIAT*MMFSLI
Trigger: TATCAAAGAGAACATCATCAAAGTGGCAATCAGCAA...CAGAAGCGAAACGAGAACACACTGTTTTTGAGACACAGTTGTCCAAATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228284.8
ENST00000546728.5
ENST00000546815.6
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTTTACTGACTCTGGTATaGGGTCTTCTGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSLLTLV*GLLTIL
Trigger: AAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAA...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546728.5
ENST00000547528.5
ENST00000651280.1
CDS-3UTR CAA 90 bp ATTCAAAGCTTTCTCGAAGGTTACAGAAATTACTTGATGATCAACTCCATGTCTAAATGCACAGCCCCATaGAACAAAACTCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: IQSFLEGYRNYLMINSMSKCTAP*NKTPAN
Trigger: ATTTGCTGGAGTTTTGTTCAATGGGGCTGTGCATTT...AGACATGGAGTTGATCATCAAGTAATTTCTGTAACCTTCGAGAAAGCTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546728.5
ENST00000651280.1
CDS CCA 72 bp GCTCTCGCTCACGCCTTCCTCCTGCTGATCCCACGCTaGCCCCATGGTCTTGTATGTCGCAGCGGCCACAGC +
Preference number: 6 (lower is better)
Translates to: ALAHAFLLLIPR*PHGLVCRSGHS
Trigger: GCTGTGGCCGCTGCGACATACAAGACCATGGGGCCAGCGTGGGATCAGCAGGAGGAAGGCGTGAGCGAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546611.1
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS CCA 72 bp TATCGCCGCCGAGGACTAGGGAGGCGGGCCAGGACATaGGGACCCGAGGACCTGAAAGACTGGAAGATGCCC +
Preference number: 6 (lower is better)
Translates to: YRRRGLGRRART*GPEDLKDWKMP
Trigger: GGGCATCTTCCAGTCTTTCAGGTCCTCGGGTCCCCATGTCCTGGCCCGCCTCCCTAGTCCTCGGCGGCGATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CAA 90 bp GCCGCCTTAACCTCATCCTCCTCTCCGTCAGCCTTGGGCCCAGCCTaGGACTCAGCCTCGGGTTCTGAAGCCGAGGTTTCGGCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: AALTSSSSPSALGPA*DSASGSEAEVSAAV
Trigger: GACTGCGGCCGAAACCTCGGCTTCAGAACCCGAGGCTGAGTCCAAGGCTGGGCCCAAGGCTGACGGAGAGGAGGATGAGGTTAAGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546611.1
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS CCA 72 bp TCACGCCTTCCTCCTGCTGATCCCACGCTGGCCCCATaGTCTTGTATGTCGCAGCGGCCACAGCCCGCGATA +
Preference number: 6 (lower is better)
Translates to: SRLPPADPTLAP*SCMSQRPQPAI
Trigger: TATCGCGGGCTGTGGCCGCTGCGACATACAAGACCATGGGGCCAGCGTGGGATCAGCAGGAGGAAGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546611.1
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS GCA 72 bp GTTCTGAAGCCGAGGTTTCGGCCGCAGTCGCCATCTTaGGCTTCTAATGACTCTCGGGTCTTCCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: VLKPRFRPQSPS*ASNDSRVFPRP
Trigger: CGGCCGCGGGAAGACCCGAGAGTCATTAGAAGCGCAAGATGGCGACTGCGGCCGAAACCTCGGCTTCAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 72 bp CAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTTaGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: QELLSRKAGLQP*RLYRRRGLGRR
Trigger: CCGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CAA 90 bp TCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTaGGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCGGGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SNPTGATVTKSGFAA*AALSPPRTREAGQD
Trigger: GTCCTGGCCCGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CAA 72 bp ACAGGAGCTACTGTCACGAAAAGCGGGTTTGCAGCCTaGGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: TGATVTKSGFAA*AALSPPRTREA
Trigger: CGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS TCA 72 bp ACACGTGCTCTCTGTCCAGGCCATCCTGGGCCATGCTaGTCTCGTCATGCAGCCACTCCAGCCAGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: TRALCPGHPGPC*SRHAATPARAL
Trigger: AAGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000552221.1
ENST00000651280.1
CDS GCA 72 bp CTGTCCAGGCCATCCTGGGCCATGCTGATCTCGTCATaGAGCCACTCCAGCCAGAGCTCTTCAGTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: LSRPSWAMLISS*SHSSQSSSVKG
Trigger: TCCCTTGACTGAAGAGCTCTGGCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS CCA 72 bp CAAGCACTTACGCTCCGTATGTCTGCGGCAAAAGCATaGGGCCACCTGGTGCCTTCCTGGTCTCCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: QALTLRMSAAKA*GHLVPSWSPAS
Trigger: AGAAGCCGGAGACCAGGAAGGCACCAGGTGGCCCCATGCTTTTGCCGCAGACATACGGAGCGTAAGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS CAA 90 bp GTAAGCACTCAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTaGCAGCCTTGGCGGCTTTATCGCCGCCGAGGACTAGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: VSTQIRQELLSRKAG*QPWRLYRRRGLGRR
Trigger: CCGCCTCCCTAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTGAGTGCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 72 bp AAGAGGTCATACACGTGCTCTCTGTCCAGGCCATCCTaGGCCATGCTGATCTCGTCATGCAGCCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: KRSYTCSLSRPS*AMLISSCSHSS
Trigger: GCTGGAGTGGCTGCATGACGAGATCAGCATGGCCCAGGATGGCCTGGACAGAGAGCACGTGTATGACCTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000552221.1
ENST00000651280.1
CDS CAA 72 bp CAAATCCGACAGGAGCTACTGTCACGAAAAGCGGGTTaGCAGCCTTGGCGGCTTTATCGCCGCCGAGGACTA +
Preference number: 6 (lower is better)
Translates to: QIRQELLSRKAG*QPWRLYRRRGL
Trigger: TAGTCCTCGGCGGCGATAAAGCCGCCAAGGCTGCAAACCCGCTTTTCGTGACAGTAGCTCCTGTCGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS CCA 72 bp GGGCCCACCTGCTCCTCCAGTCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCGTCATATTCCCACTCG +
Preference number: 6 (lower is better)
Translates to: GPTCSSSLSISS*FFSSSSSYSHS
Trigger: CGAGTGGGAATATGACGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAGACTGGAGGAGCAGGTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546611.1
CDS GCA 72 bp GGTGCCAGCCAGGACGAAGTTTGCACTAGTCTACCATaGAAGCACTTACGCTCCGTATGTCTGCGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: GASQDEVCTSLP*KHLRSVCLRQK
Trigger: CTTTTGCCGCAGACATACGGAGCGTAAGTGCTTGCATGGTAGACTAGTGCAAACTTCGTCCTGGCTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547397.1
CDS CAA 72 bp AAGATTTCACTCATCTTCTGGCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGCCTGAGCAGTCTGATC +
Preference number: 6 (lower is better)
Translates to: KISLIFWRAILT*VSSPSSLSSLI
Trigger: GATCAGACTGCTCAGGCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS CAA 90 bp GTCAAGGGAAAGATTTCACTCATCTTCTGGCGGGCCATCCTCACCTaGGTAAGCTCCCCTTCCAGCCTGAGCAGTCTGATCAAGTCCACA +
Preference number: 6 (lower is better)
Translates to: VKGKISLIFWRAILT*VSSPSSLSSLIKST
Trigger: TGTGGACTTGATCAGACTGCTCAGGCTGGAAGGGGAGCTTACCAAGGTGAGGATGGCCCGCCAGAAGATGAGTGAAATCTTTCCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS CAA 90 bp GCAGTGCTGGGTGTCACCATGAGCTCTAAGGCAGAAAACAAAAAGTaGCTGCCACCAGGACACAAAGTGGAAGGCACTCGAAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: AVLGVTMSSKAENKK*LPPGHKVEGTRRER
Trigger: CCTCTCCCTTCGAGTGCCTTCCACTTTGTGTCCTGGTGGCAGCAACTTTTTGTTTTCTGCCTTAGAGCTCATGGTGACACCCAGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548582.5
CDS CCA 72 bp CAGAAAACAAAAAGTTGCTGCCACCAGGACACAAAGTaGAAGGCACTCGAAGGGAGAGGCCGTCTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: QKTKSCCHQDTK*KALEGRGRLLP
Trigger: TGGGAGAAGACGGCCTCTCCCTTCGAGTGCCTTCCACTTTGTGTCCTGGTGGCAGCAACTTTTTGTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548582.5
CDS CCA 72 bp CAAACTCTCGGTAAGCCTCCCAGAGGGCGAGTCCTTTaGTCATATGTAAACCAACAGACGAGAGAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: QTLGKPPRGRVL*SYVNQQTREPF
Trigger: AAAGGGCTCTCTCGTCTGTTGGTTTACATATGACCAAAGGACTCGCCCTCTGGGAGGCTTACCGAGAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000550322.5
ENST00000550619.1
ENST00000651280.1
CDS GCA 72 bp TGCTATCCCAGAGTTCCCGAGCTTTCTGCATGTTATTaGACAGTCGAGCCTAAAGTGCATCAGCAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: CYPRVPELSACY*TVEPKVHQQAV
Trigger: AACAGCCTGCTGATGCACTTTAGGCTCGACTGTGCAATAACATGCAGAAAGCTCGGGAACTCTGGGATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546808.5
CDS TCA 72 bp TCCCTCAGCCATGTAGGGGCTACTGGAAAGTGTACCTaGTATTGTGATCTGCAACCAGCATTCTGCCTTTAC +
Preference number: 6 (lower is better)
Translates to: SLSHVGATGKCT*YCDLQPAFCLY
Trigger: GTAAAGGCAGAATGCTGGTTGCAGATCACAATATCAGGTACACTTTCCAGTAGCCCCTACATGGCTGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548582.5
CDS TCA 72 bp ATGCCTGCCAAATCTCCACATAATCAGTGGCCTGGATaGAGCCGGCATTCAAAGCTTTCTCGAAGGTTACTG +
Preference number: 6 (lower is better)
Translates to: MPAKSPHNQWPG*SRHSKLSRRLL
Trigger: CAGTAACCTTCGAGAAAGCTTTGAATGCCGGCTTCATCCAGGCCACTGATTATGTGGAGATTTGGCAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548077.1
CDS TCA 72 bp GCTCCTTTGTTGGATAGATGTTGTACTAGAGCACAGTaGCTCTCAAAGGAGGGATCCTGCCCATCAAGAGAC +
Preference number: 6 (lower is better)
Translates to: APLLDRCCTRAQ*LSKEGSCPSRD
Trigger: GTCTCTTGATGGGCAGGATCCCTCCTTTGAGAGTCACTGTGCTCTAGTACAACATCTATCCAACAAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS CCA 72 bp ATAGACAACTGCTCCTCCAGTCTCTCAATCTCCAGCTaGTTTTTCTCCTCCTCTTCGTCATATTCCCACTCG +
Preference number: 6 (lower is better)
Translates to: IDNCSSSLSISS*FFSSSSSYSHS
Trigger: CGAGTGGGAATATGACGAAGAGGAGGAGAAAAACCAGCTGGAGATTGAGAGACTGGAGGAGCAGTTGTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000552221.1
ENST00000651280.1
CDS GCA 72 bp AGCTTTCTGCATGTTATTGCACAGTCGAGCCTAAAGTaGATCAGCAGGCTGTTAGGAGACCTGAACCTTATG +
Preference number: 6 (lower is better)
Translates to: SFLHVIAQSSLK*ISRLLGDLNLM
Trigger: CATAAGGTTCAGGTCTCCTAACAGCCTGCTGATGCACTTTAGGCTCGACTGTGCAATAACATGCAGAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546808.5
CDS CAA 90 bp GCTGCTGTAGTGCTTTGTTATAGTTCTGAATTACTGACTCTGGTATaGGGTCTTCTGACCATTCTTCATACTCTGCAAATGTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AAVVLCYSSELLTLV*GLLTILHTLQMWPP
Trigger: TGGAGGCCACATTTGCAGAGTATGAAGAATGGTCAGAAGACCCAATACCAGAGTCAGTAATTCAGAACTATAACAAAGCACTACAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228284.8
ENST00000431469.6
ENST00000546728.5
ENST00000546815.6
ENST00000547528.5
ENST00000651280.1
CDS CAA 72 bp CAAGAGACATTTGGCAATGTTAAGAGACATTTCTGGTaGTCATGTTTGGTTGTGGTGGTGAAGCTGCTACTG +
Preference number: 6 (lower is better)
Translates to: QETFGNVKRHFW*SCLVVVVKLLL
Trigger: CAGTAGCAGCTTCACCACCACAACCAAACATGACAACCAGAAATGTCTCTTAACATTGCCAAATGTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS CAA 72 bp ACTCTCAAAGGAGGGATCCTGCCCATCAAGAGACATTaGGCAATGTTAAGAGACATTTCTGGTTGTCATGTT +
Preference number: 6 (lower is better)
Translates to: TLKGGILPIKRH*AMLRDISGCHV
Trigger: AACATGACAACCAGAAATGTCTCTTAACATTGCCAAATGTCTCTTGATGGGCAGGATCCCTCCTTTGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS TCA 72 bp TGCTCATTGACACGAGCTAATCGGGTTTCAGTTTTCTaGACAGCTATATCCCAATCTTCTAAAGAACCTCCA +
Preference number: 6 (lower is better)
Translates to: CSLTRANRVSVF*TAISQSSKEPP
Trigger: TGGAGGTTCTTTAGAAGATTGGGATATAGCTGTTCAGAAAACTGAAACCCGATTAGCTCGTGTCAATGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS CCA 72 bp CATCAAGAGACATTTGGCAATGTTAAGAGACATTTCTaGTTGTCATGTTTGGTTGTGGTGGTGAAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: HQETFGNVKRHF*LSCLVVVVKLL
Trigger: TAGCAGCTTCACCACCACAACCAAACATGACAACCAGAAATGTCTCTTAACATTGCCAAATGTCTCTTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619503.4
CDS CCA 72 bp TACATCATTTGCCCAATCACAATGTATCTGGGGAACTaGGACATCTCGCCAAAAGTTGTATTAAGAACATGT +
Preference number: 6 (lower is better)
Translates to: YIICPITMYLGN*DISPKVVLRTC
Trigger: ACATGTTCTTAATACAACTTTTGGCGAGATGTCCCAGTTCCCCAGATACATTGTGATTGGGCAAATGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548119.1
CDS CAA 90 bp AAGAACATGTTCAGCTCTAAAGTGAAAAACATGTGCTTAAATACCTaGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAGGTATGCCTG +
Preference number: 6 (lower is better)
Translates to: KNMFSSKVKNMCLNT*FEINPSPQVIKVCL
Trigger: CAGGCATACCTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGGTATTTAAGCACATGTTTTTCACTTTAGAGCTGAACATGTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548119.1
CDS CAA 72 bp TTCAGCTCTAAAGTGAAAAACATGTGCTTAAATACCTaGTTTGAAATCAACCCTTCTCCTCAGGTAATCAAG +
Preference number: 6 (lower is better)
Translates to: FSSKVKNMCLNT*FEINPSPQVIK
Trigger: CTTGATTACCTGAGGAGAAGGGTTGATTTCAAACAAGGTATTTAAGCACATGTTTTTCACTTTAGAGCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548119.1