Pregenerated sensors for SARNP (Homo sapiens)
Ensembl gene IDs: ENSG00000205323Ensembl transcript IDs: ENST00000546604.5, ENST00000552207.1, ENST00000552884.5, ENST00000552946.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTaGGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCA | + |
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Preference number: 1 (lower is better) Translates to: GADRGIGMPGKNFFN*DQGFLEGTTAKRPS Trigger: TGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR TCA 90 bp | TTTTCAAGTTATGTGACAGAGGGCAAAGACGGCCATAGGGTGCTCTaGGTTTTGGGATGGTCACATGACACAATCCAGCACTTGAACCTG | + |
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Preference number: 1 (lower is better) Translates to: FSSYVTEGKDGHRVL*VLGWSHDTIQHLNL Trigger: CAGGTTCAAGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTCACATAACTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR CCA 90 bp | TTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTaGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: LECQERTSSTEIKAS*REPLQKGHQAVFKL Trigger: TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTGGCATTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCCCCCCTCCCACCTTATaGTGTGTGTGGACCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KTAIGCSEFWDGHMTQSSPPPTL*CVWTWP Trigger: TGGCCAGGTCCACACACATCATAAGGTGGGAGGGGG...GCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| 3UTR-3UTR CCA 90 bp | AAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCAGCTCAGCAACCCAGTaGGAGTTAGCACCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KTAIGCSEFWDGHMTQSSSSATQ*ELAPPP Trigger: GGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCT...GCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTGGCCATAGGGTGCTCTaGGTTTTGGGATGGTCACAT | + |
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Preference number: 2 (lower is better) Translates to: GCLRSMELTGALECQERTGHRVL*VLGWSH Trigger: ATGTGACCATCCCAAAACTCAGAGCACCCTATGGCC...AGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTACATGCTCCCTCATTaGGAGGCAGGACGTAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: TEIKASWREPLQKGHQAVYMLPH*EAGRRH Trigger: GTGCCTACGTCCTGCCTCGCAATGAGGGAGCATGTA...AACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCCAGAGTGAAGGGACTTaGGGGGCACAGCTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: MELTGALECQERTSSTEIQSEGT*GAQLSN Trigger: GTTGCTGAGCTGTGCCCCCCAAGTCCCTTCACTCTG...GATCTCAGTTGAAGAAGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATACATGCTCCCTCATTaGGAGGCAGGACGTAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: KASWREPLQKGHQAVFKLYMLPH*EAGRRH Trigger: GTGCCTACGTCCTGCCTCGCAATGAGGGAGCATGTA...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCAACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGTGTGGACCTGGCCAGTaGCCCTCTGAACATATCATT | + |
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Preference number: 2 (lower is better) Translates to: LQLRSRLPGGNHCKKAIRCGPGQ*PSEHII Trigger: AATGATATGTTCAGAGGGGCACTGGCCAGGTCCACA...CCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCAACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGTTTGGGATGGTCACATaGCACAATCCAGCACTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LQLRSRLPGGNHCKKAIRFGMVT*HNPALE Trigger: TTCAAGTGCTGGATTGTGTCATGTGACCATCCCAAA...CCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTAGGTTTGTTATCAGATaGCAGACCTTTTGTTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GCLRSMELTGALECQERTRFVIR*QTFCWN Trigger: GTTCCAACAAAAGGTCTGTCATCTGATAACAAACCT...AGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552884.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACGACACAATCCAGCACTaGAACCTGGGGTACATGCTC | + |
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Preference number: 3 (lower is better) Translates to: RVSEEYGADRGIGMPGKNDTIQH*NLGYML Trigger: GAGCATGTACCCCAGGTTCAAGTGCTGGATTGTGTC...GTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR TCA 72 bp | TATGTGACAGAGGGCAAAGACGGCCATAGGGTGCTCTaGGTTTTGGGATGGTCACATGACACAATCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: YVTEGKDGHRVL*VLGWSHDTIQH Trigger: GTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR TCA 72 bp | ACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTaGCAGAGGGCAAAGACGGCCATAGGGTGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TAKRPSGSFQVM*QRAKTAIGCSE Trigger: CTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTCACATAACTTGAAAACTGCCTGATGGCCTTTTTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR TCA 72 bp | AGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTaGGATCAAGGCTTCCTGGAGGGAACCACTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: RGIGMPGKNFFN*DQGFLEGTTAK Trigger: TTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTGGCATTCCAATGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR CCA 72 bp | CAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTaGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: QERTSSTEIKAS*REPLQKGHQAV Trigger: AACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| 3UTR GCA 72 bp | CCCCTCCCACCTTATGATGTGTGTGGACCTGGCCAGTaGCCCTCTGAACATATCATTATTAGTGTAATTATC | + |
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Preference number: 3 (lower is better) Translates to: PLPPYDVCGPGQ*PSEHIIISVII Trigger: GATAATTACACTAATAATGATATGTTCAGAGGGGCACTGGCCAGGTCCACACACATCATAAGGTGGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| CDS-3UTR TCA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTCCCCCTCCCACCTTATaGTGTGTGTGGACCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTPPPTL*CVWTWP Trigger: TGGCCAGGTCCACACACATCATAAGGTGGGAGGGGG...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| CDS-3UTR CCA 90 bp | ACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTAGCTCAGCAACCCAGTaGGAGTTAGCACCCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TEIKASWREPLQKGHQAVSSATQ*ELAPPP Trigger: GGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCT...AACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTACATGCTCCCTCATTaGGAGGCAGGACGTAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RVSEEYGADRGIGMPGKNYMLPH*EAGRRH Trigger: GTGCCTACGTCCTGCCTCGCAATGAGGGAGCATGTA...GTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACCCTGGAGGGAACCACTaGAAAAAGGCCATCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RVSEEYGADRGIGMPGKNPGGNH*KKAIRQ Trigger: CTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGG...GTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CCA 90 bp | CTTCAACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGAGTGAAGGGACTTaGGGGGCACAGCTCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LQLRSRLPGGNHCKKAIRQSEGT*GAQLSN Trigger: GTTGCTGAGCTGTGCCCCCCAAGTCCCTTCACTCTG...CCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| CDS-3UTR CCA 90 bp | ACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTGCAAGCTTTAGCTTATaGAGCTCCACCGTCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: TEIKASWREPLQKGHQAVASFSL*SSTVSV Trigger: GACCGAGACGGTGGAGCTCCATAAGCTAAAGCTTGC...AACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCGCAAGCTTTAGCTTATaGAGCTCCACCGTCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: VSEEYGADRGIGMPGKNFASFSL*SSTVSV Trigger: GACCGAGACGGTGGAGCTCCATAAGCTAAAGCTTGC...GAAGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTAAGACGGCCATAGGGTaGTCTGAGTTTTGGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTKTAIG*SEFWDG Trigger: ACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTACCTGGAGGGAACCACTaGAAAAAGGCCATCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KASWREPLQKGHQAVFKLPGGNH*KKAIRQ Trigger: CTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGG...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTTGTGGACCTGGCCAGTaGCCCTCTGAACATATCATT | + |
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Preference number: 4 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTCGPGQ*PSEHII Trigger: AATGATATGTTCAGAGGGGCACTGGCCAGGTCCACA...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546604.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTTGGGATGGTCACATaGCACAATCCAGCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RVSEEYGADRGIGMPGKNFGMVT*HNPALE Trigger: TTCAAGTGCTGGATTGTGTCATGTGACCATCCCAAA...GTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR TCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTAGGCCATAGGGTGCTCTaGGTTTTGGGATGGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: KASWREPLQKGHQAVFKLGHRVL*VLGWSH Trigger: ATGTGACCATCCCAAAACTCAGAGCACCCTATGGCC...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR TCA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTGTCACATTGTGTGCATaGCAGCCTTTGTTAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTVTLCA*QPLLRV Trigger: CACCCTTAACAAAGGCTGTCATGCACACAATGTGAC...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CCA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTGAGATCAAGGCTTCCTaGAGGGAACCACTGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTEIKAS*REPLQK Trigger: TTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTC...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR TCA 90 bp | ACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTTGGGATGGTCACATaGCACAATCCAGCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TEIKASWREPLQKGHQAVFGMVT*HNPALE Trigger: TTCAAGTGCTGGATTGTGTCATGTGACCATCCCAAA...AACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR TCA 90 bp | AAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCAAGAACTTCTTCAACTaGGATCAAGGCTTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KTAIGCSEFWDGHMTQSSKNFFN*DQGFLE Trigger: CTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTT...GCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTAGAGATCAAGGCTTCCTaGAGGGAACCACTGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: KASWREPLQKGHQAVFKLEIKAS*REPLQK Trigger: TTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTC...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTAACAGGGGCATTGGAATaGCAGGAAAGAACTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KASWREPLQKGHQAVFKLTGALE*QERTSS Trigger: TGAAGAAGTTCTTTCCTGGCATTCCAATGCCCCTGT...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTATTTGTCACATTGTGTaGATGACAGCCTTTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: GCLRSMELTGALECQERTICHIV*MTAFVK Trigger: CTTAACAAAGGCTGTCATGCACACAATGTGACAAAT...AGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR GCA 90 bp | AAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCATTTGTCACATTGTGTaGATGACAGCCTTTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: KTAIGCSEFWDGHMTQSSICHIV*MTAFVK Trigger: CTTAACAAAGGCTGTCATGCACACAATGTGACAAAT...GCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR TCA 90 bp | AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTAAGGTTTGTTATCAGATaGCAGACCTTTTGTTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KASWREPLQKGHQAVFKLRFVIR*QTFCWN Trigger: GTTCCAACAAAAGGTCTGTCATCTGATAACAAACCT...TAACTTGAAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CAA 90 bp | ACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTGACACAATCCAGCACTaGAACCTGGGGTACATGCTC | + |
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Preference number: 5 (lower is better) Translates to: TAIGCSEFWDGHMTQSSTDTIQH*NLGYML Trigger: GAGCATGTACCCCAGGTTCAAGTGCTGGATTGTGTC...AGTGCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS-3UTR CAA 90 bp | AAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCGACACAATCCAGCACTaGAACCTGGGGTACATGCTC | + |
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Preference number: 5 (lower is better) Translates to: KTAIGCSEFWDGHMTQSSDTIQH*NLGYML Trigger: GAGCATGTACCCCAGGTTCAAGTGCTGGATTGTGTC...GCTGGATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546604.5 ENST00000552884.5 |
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| CDS GCA 90 bp | AACCCACCCCTCCAGCTGATACCAAAATCCACCACACTCAAGTCCTaGAGCAGATATAAGCTGCTCCTCCATATCTGCAGGTTTCACATC | + |
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Preference number: 5 (lower is better) Translates to: NPPLQLIPKSTTLKS*SRYKLLLHICRFHI Trigger: GATGTGAAACCTGCAGATATGGAGGAGCAGCTTATATCTGCTGCAGGACTTGAGTGTGGTGGATTTTGGTATCAGCTGGAGGGGTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552207.1 |
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| CDS CCA 72 bp | CTTAAGAGATACTCCCACCCCAGCGCCCCAAGTAGCTaGGACTACAAACACCTGCCACCATGTCTAGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LKRYSHPSAPSS*DYKHLPPCLVN Trigger: ATTAACTAGACATGGTGGCAGGTGTTTGTAGTCCCAGCTACTTGGGGCGCTGGGGTGGGAGTATCTCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552207.1 |
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| CDS GCA 72 bp | CTCCAGCTGATACCAAAATCCACCACACTCAAGTCCTaGAGCAGATATAAGCTGCTCCTCCATATCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQLIPKSTTLKS*SRYKLLLHICR Trigger: CCTGCAGATATGGAGGAGCAGCTTATATCTGCTGCAGGACTTGAGTGTGGTGGATTTTGGTATCAGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552207.1 |
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| CDS CAA 72 bp | TTCACATCCCAAGAATACTGTATTTCTGAACCGCATTaGGTTATGGTGAACCCTCAGATACAGACAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: FTSQEYCISEPH*VMVNPQIQTAN Trigger: GTTTGCTGTCTGTATCTGAGGGTTCACCATAACCAAATGCGGTTCAGAAATACAGTATTCTTGGGATGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552207.1 |
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| CDS CAA 72 bp | AAATCCAAGTATAAGTGGACCTGTGCAGTTCAAACCTaGCTGAAGTGTCTACTATGTATCCTTCCAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: KSKYKWTCAVQT*LKCLLCILPSF Trigger: AAAGCTTGGAAGGATACATAGTAGACACTTCAGCAAGGTTTGAACTGCACAGGTCCACTTATACTTGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552207.1 |
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| CDS CAA 72 bp | CATCATCTTCAGACTGTTCAAGGACAAAGGAAAGAGTaGAAACAAACTAGCCTCCATTCACCAAGTAAATGG | + |
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Preference number: 6 (lower is better) Translates to: HHLQTVQGQRKE*KQTSLHSPSKW Trigger: CCATTTACTTGGTGAATGGAGGCTAGTTTGTTTCAACTCTTTCCTTTGTCCTTGAACAGTCTGAAGATGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552946.1 |
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