RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SARM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000004139

Ensembl transcript IDs: ENST00000379061.8, ENST00000577870.2, ENST00000578128.5, ENST00000579593.1, ENST00000580711.1, ENST00000582323.1, ENST00000585453.5, ENST00000585482.6

Found 842 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTaGGGGAGTTCTAACCTCCCGTGCCCAAGCCTGACTTCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: RDPPHDGDRQPNGRA*GSSNLPCPSLTSLP
Trigger: GGGAAGGGAAGTCAGGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR TCA 90 bp ACCCATGGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGATGATCTTCTC +
Preference number: 1 (lower is better)
Translates to: THGCSTLQTGVRACR*VPGGAALQEADDLL
Trigger: GAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp CCCAACCGAGGGGTAGCAGCTGCAGCCCAGCCAAGCAGAACACCCTaGCCCTACAGACCTGTGTCTGAGCAGGCTTTGGAGGAAAGGCCA +
Preference number: 1 (lower is better)
Translates to: PNRGVAAAAQPSRTP*PYRPVSEQALEERP
Trigger: TGGCCTTTCCTCCAAAGCCTGCTCAGACACAGGTCTGTAGGGCCAGGGTGTTCTGCTTGGCTGGGCTGCAGCTGCTACCCCTCGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp AGCCTGCAGATGAGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGATaGTCTTCTCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGT +
Preference number: 1 (lower is better)
Translates to: SLQMSPGRSGPAGSG*SSQWWPPGIRGTTC
Trigger: ACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR TCA 90 bp TGCCATACGTTAGACAACAGAAGCTGCTGGGCTGGGCAGGAGCCCTaGGCTGCCTGGTGGATTGGTACCAAGTGGGGCCAGCCAGGGCTT +
Preference number: 1 (lower is better)
Translates to: CHTLDNRSCWAGQEP*AAWWIGTKWGQPGL
Trigger: AAGCCCTGGCTGGCCCCACTTGGTACCAATCCACCAGGCAGCTCAGGGCTCCTGCCCAGCCCAGCAGCTTCTGTTGTCTAACGTATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp TGCCTTGGGCTTTGGGGCCCTCTGTTTTCCTGCTCCCAGTCTGCCTaGCATACGTTAGACAACAGAAGCTGCTGGGCTGGGCAGGAGCCC +
Preference number: 1 (lower is better)
Translates to: CLGLWGPLFSCSQSA*HTLDNRSCWAGQEP
Trigger: GGGCTCCTGCCCAGCCCAGCAGCTTCTGTTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAAAACAGAGGGCCCCAAAGCCCAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTaGGCAGAGGGAGCTGCTAGTCAGCTGTTTGCCCACACTCTGCCT +
Preference number: 1 (lower is better)
Translates to: RGTTCGHRSQCGSDS*AEGAASQLFAHTLP
Trigger: AGGCAGAGTGTGGGCAAACAGCTGACTAGCAGCTCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp CCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCTaGGTTTATTGGAGGGTGCTTTCTTACCCTCTGAACCCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: PLRGKSLQQPPRPGA*VYWRVLSYPLNPVE
Trigger: CTCCACTGGGTTCAGAGGGTAAGAAAGCACCCTCCAATAAACCCAGGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CTCCCAGTCTGCCTGCCATACGTTAGACAACAGAAGCTGCTGGGCTaGGCAGGAGCCCTGAGCTGCCTGGTGGATTGGTACCAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: LPVCLPYVRQQKLLG*AGALSCLVDWYQVG
Trigger: CCCCACTTGGTACCAATCCACCAGGCAGCTCAGGGCTCCTGCCCAGCCCAGCAGCTTCTGTTGTCTAACGTATGGCAGGCAGACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp CCCAGGCCCTTGCTCAGAATACAGTGCCCAGGCCCGCCTGGGCATTaGCTTAATTCCTGTCTGAGGCTGCCTTCCGTCATCCTCCTCAAG +
Preference number: 1 (lower is better)
Translates to: PRPLLRIQCPGPPGH*LNSCLRLPSVILLK
Trigger: CTTGAGGAGGATGACGGAAGGCAGCCTCAGACAGGAATTAAGGCAATGCCCAGGCGGGCCTGGGCACTGTATTCTGAGCAAGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR GCA 90 bp TGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCATATCCATaGCCTGGCTCTGGCCCCGGTGAGCACTTGTGCTGCATGAGGAAA +
Preference number: 1 (lower is better)
Translates to: CPVRAVSRLPCLSYP*PGSGPGEHLCCMRK
Trigger: TTTCCTCATGCAGCACAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp CTGGTGCCTTGGGCTTTGGGGCCCTCTGTTTTCCTGCTCCCAGTCTaGCTGCCATACGTTAGACAACAGAAGCTGCTGGGCTGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: LVPWALGPSVFLLPV*LPYVRQQKLLGWAG
Trigger: TCCTGCCCAGCCCAGCAGCTTCTGTTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAAAACAGAGGGCCCCAAAGCCCAAGGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp ACCAGAGGCAGCACGAGGGCTGGCATCTCTCCTTCCAGCCCAAACTaGACAGCCCCAACCAGGTTCCCAACACGTGTAGCAGTCATCAGC +
Preference number: 1 (lower is better)
Translates to: TRGSTRAGISPSSPN*TAPTRFPTRVAVIS
Trigger: GCTGATGACTGCTACACGTGTTGGGAACCTGGTTGGGGCTGTGCAGTTTGGGCTGGAAGGAGAGATGCCAGCCCTCGTGCTGCCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp CCTCTGGGTGTCTTGTCCCAGGTTGCCCCTCTCCTTGCAGATGGCTaGCTAATCCTCCAGGAGCCATTTTCCAAGGGCGAGATGGCGAGC +
Preference number: 1 (lower is better)
Translates to: PLGVLSQVAPLLADG*LILQEPFSKGEMAS
Trigger: GCTCGCCATCTCGCCCTTGGAAAATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GAGCGGCCCTGCAGGAAGCGGATGATCTTCTCAATGGTGGCCTCCTaGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTC +
Preference number: 1 (lower is better)
Translates to: ERPCRKRMIFSMVAS*YSWDHLWAQEPMWF
Trigger: GAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR GCA 90 bp TATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTaGTTGTCATATCCATGCCCTGGCTCTGGCCCCGGTGAGCACTTG +
Preference number: 1 (lower is better)
Translates to: YCYWRCPVRAVSRLP*LSYPCPGSGPGEHL
Trigger: CAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp AAATGGAAGTCACAGCAGGGCTGGGGAACTGGGGACTGGTTAGGTTaGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: KWKSQQGWGTGDWLG*THGCSTLQTGVRAC
Trigger: GCAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp ATGATCTTCTCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTaGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCAGAGGGAGC +
Preference number: 1 (lower is better)
Translates to: MIFSMVASWYSWDHL*AQEPMWFRQLGRGS
Trigger: GCTCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp TTACCCTCTGGGTGTCTTGTCCCAGGTTGCCCCTCTCCTTGCAGATaGCTGCCTAATCCTCCAGGAGCCATTTTCCAAGGGCGAGATGGC +
Preference number: 1 (lower is better)
Translates to: LPSGCLVPGCPSPCR*LPNPPGAIFQGRDG
Trigger: GCCATCTCGCCCTTGGAAAATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CCAGGAGAGAACGTGTTTCTCATTTCTTCCAGCTTCTGGGGCTGCTaGCATTCCTTGGCTTGGGGCGGCCATCACCAGTCTCTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: PGENVFLISSSFWGC*HSLAWGGHHQSLPL
Trigger: CAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGAAATGAGAAACACGTTCTCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CAGTTCTGGAGGCCAGAAGTCCAAAGTCAGTACCACCGGGCTGAATaGAAGCAGTCAGCAGGCAGTGCTCCCTTGCAAGCCTCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: QFWRPEVQSQYHRAE*KQSAGSAPLQASRR
Trigger: TCTCCTGGAGGCTTGCAAGGGAGCACTGCCTGCTGACTGCTTCCATTCAGCCCGGTGGTACTGACTTTGGACTTCTGGCCTCCAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp GAATCCTTACCCTCTGGGTGTCTTGTCCCAGGTTGCCCCTCTCCTTaGAGATGGCTGCCTAATCCTCCAGGAGCCATTTTCCAAGGGCGA +
Preference number: 1 (lower is better)
Translates to: ESLPSGCLVPGCPSP*RWLPNPPGAIFQGR
Trigger: TCGCCCTTGGAAAATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp TGCAGGAAGCGGATGATCTTCTCAATGGTGGCCTCCTGGTATTCGTaGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTG +
Preference number: 1 (lower is better)
Translates to: CRKRMIFSMVASWYS*DHLWAQEPMWFRQL
Trigger: CAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp CTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTaGGGAACTGGGGACTGGTTAGGTTGGACCCATGGGTGCAGCACC +
Preference number: 1 (lower is better)
Translates to: LFLQKGRWKWKSQQG*GTGDWLGWTHGCST
Trigger: GGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp CTCCCAACCAGAAATGGCAGCTTCATTCCTGGAATCCTTACCCTCTaGGTGTCTTGTCCCAGGTTGCCCCTCTCCTTGCAGATGGCTGCC +
Preference number: 1 (lower is better)
Translates to: LPTRNGSFIPGILTL*VSCPRLPLSLQMAA
Trigger: GGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAAGGATTCCAGGAATGAAGCTGCCATTTCTGGTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CTCACCATCAAGGAAGTTCTTCCTGGGTCTAACCTAAGCCCCACGTaGGGTATGGATAGGAGCTCTGCTGCCTTTCCCTTGGACGCCCCT +
Preference number: 1 (lower is better)
Translates to: LTIKEVLPGSNLSPT*GMDRSSAAFPLDAP
Trigger: AGGGGCGTCCAAGGGAAAGGCAGCAGAGCTCCTATCCATACCCCACGTGGGGCTTAGGTTAGACCCAGGAAGAACTTCCTTGATGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp CTAGCAGGTGGCCAAGCCCAGACAAGGGCAGTCTCCATTCCTCCTTaGCTACTGTCTTCCCACCCTCACCATCAAGGAAGTTCTTCCTGG +
Preference number: 1 (lower is better)
Translates to: LAGGQAQTRAVSIPP*LLSSHPHHQGSSSW
Trigger: CCAGGAAGAACTTCCTTGATGGTGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCTTGGCCACCTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp GCTTCATTCCTGGAATCCTTACCCTCTGGGTGTCTTGTCCCAGGTTaGCCCTCTCCTTGCAGATGGCTGCCTAATCCTCCAGGAGCCATT +
Preference number: 1 (lower is better)
Translates to: ASFLESLPSGCLVPG*PSPCRWLPNPPGAI
Trigger: AATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAAGGATTCCAGGAATGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATaGAAATGGAAGTCACAGCAGGGCTGGGGAACTGGGGACTGGTTA +
Preference number: 1 (lower is better)
Translates to: AQGDWFQELFLQKGR*KWKSQQGWGTGDWL
Trigger: TAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp ACGTGTTTCTCATTTCTTCCAGCTTCTGGGGCTGCTGGCATTCCTTaGCTTGGGGCGGCCATCACCAGTCTCTGCCTCTGTGCTCACATT +
Preference number: 1 (lower is better)
Translates to: TCFSFLPASGAAGIP*LGAAITSLCLCAHI
Trigger: AATGTGAGCACAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGAAATGAGAAACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp CCACTTCTGAGTCCTCTGTCTCAGGAGAAGCCAGGCCTAGGTGCTTaGCCTGGTGATCTGAGCTGTGTTTGTCCTAGTATGGGTGGCAGT +
Preference number: 1 (lower is better)
Translates to: PLLSPLSQEKPGLGA*PGDLSCVCPSMGGS
Trigger: ACTGCCACCCATACTAGGACAAACACAGCTCAGATCACCAGGTCAAGCACCTAGGCCTGGCTTCTCCTGAGACAGAGGACTCAGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp TTGGCTTGGGGCGGCCATCACCAGTCTCTGCCTCTGTGCTCACATTaGCTCTCCTCCTCTTTGTGCCTTCTCAATTCTGTCGGTGCCAAA +
Preference number: 1 (lower is better)
Translates to: LAWGGHHQSLPLCSH*LSSSLCLLNSVGAK
Trigger: TTTGGCACCGACAGAATTGAGAAGGCACAAAGAGGAGGAGAGTCAATGTGAGCACAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp AAACAAACCTTCTGGTGCCTTGGGCTTTGGGGCCCTCTGTTTTCCTaGTCCCAGTCTGCCTGCCATACGTTAGACAACAGAAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: KQTFWCLGLWGPLFS*SQSACHTLDNRSCW
Trigger: CCAGCAGCTTCTGTTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAAAACAGAGGGCCCCAAAGCCCAAGGCACCAGAAGGTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATaGAAGTCACAGCAGGGCTGGGGAACTGGGGACTGGTTAGGTTGG +
Preference number: 1 (lower is better)
Translates to: GDWFQELFLQKGRWK*KSQQGWGTGDWLGW
Trigger: CCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 90 bp AAGGAGCCCCAAACCTGGAGTGAGACCTTTGACTTTCTGATGATGTaGCCAAGAACTAGGAGTCACCTGGCCAGCACAGCCAAGAGTGGG +
Preference number: 1 (lower is better)
Translates to: KEPQTWSETFDFLMM*PRTRSHLASTAKSG
Trigger: CCCACTCTTGGCTGTGCTGGCCAGGTGACTCCTAGTTCTTGGCCACATCATCAGAAAGTCAAAGGTCTCACTCCAGGTTTGGGGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp ACCTCTCTGAATACTGCCCTTGGGGACCTCAGGAGGGAGTGGGACTaGTTGGAGACAAAGAGCCAGAAATCATCCCCTGGAGATACTCAG +
Preference number: 1 (lower is better)
Translates to: TSLNTALGDLRREWD*LETKSQKSSPGDTQ
Trigger: CTGAGTATCTCCAGGGGATGATTTCTGGCTCTTTGTCTCCAATCAGTCCCACTCCCTCCTGAGGTCCCCAAGGGCAGTATTCAGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp AGGTGGCAGAGGAGCTATTTGGGACAGGAGTCAGTTCTCCCTTTCTaGTATCCATCACTTATAACCCCACAGGCCAGAGGAGAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: RWQRSYLGQESVLPF*YPSLITPQARGEVL
Trigger: CAGGACCTCTCCTCTGGCCTGTGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATAGCTCCTCTGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp GGTTTTGAACTCAGGGCTGACTCCAAAGCCCATGCTTGTTTTCTGTaGCCTGCCATATCCCTACTAAGTGCCAAGTGGGTGGGTGATGCC +
Preference number: 1 (lower is better)
Translates to: GFELRADSKAHACFL*PAISLLSAKWVGDA
Trigger: GGCATCACCCACCCACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTGGAGTCAGCCCTGAGTTCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp AACAGAGTGGGATTTGAGGGGCCTGACACTGCTAGGGTCCCTGGATaGCTCATCGTATACCTTCTTTGGAGGATCCACTGTCCTGTAGGA +
Preference number: 1 (lower is better)
Translates to: NRVGFEGPDTARVPG*LIVYLLWRIHCPVG
Trigger: TCCTACAGGACAGTGGATCCTCCAAAGAAGGTATACGATGAGGCATCCAGGGACCCTAGCAGTGTCAGGCCCCTCAAATCCCACTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp AGCCAGAAATCATCCCCTGGAGATACTCAGACACTGTATTGTTATTaGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCA +
Preference number: 1 (lower is better)
Translates to: SQKSSPGDTQTLYCY*RCPVRAVSRLPCLS
Trigger: TGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATACAGTGTCTGAGTATCTCCAGGGGATGATTTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp AGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCTCTCTaGTCTCTCACAGGATGCTGGAAAAGGCTGATCCTCACCTCGAGT +
Preference number: 1 (lower is better)
Translates to: RQALRVPHMKSKLSL*SLTGCWKRLILTSS
Trigger: ACTCGAGGTGAGGATCAGCCTTTTCCAGCATCCTGTGAGAGACCAGAGAGAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp TGCCCTGCCATATCCCTACTAAGTGCCAAGTGGGTGGGTGATGCCTaGTGTGACCACAAGAGGTTCAGACAAGAAAGCAATCAATGGGAA +
Preference number: 1 (lower is better)
Translates to: CPAISLLSAKWVGDA*CDHKRFRQESNQWE
Trigger: TTCCCATTGATTGCTTTCTTGTCTGAACCTCTTGTGGTCACAGCAGGCATCACCCACCCACTTGGCACTTAGTAGGGATATGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GGATCTGATGATGACAGAGACTCTGGTGCCATACAGAGCCCACTGTaGGTTCTGGTGTCCCCAGAATCCATGTGTCTTCATTCATTCACC +
Preference number: 1 (lower is better)
Translates to: GSDDDRDSGAIQSPL*VLVSPESMCLHSFT
Trigger: GGTGAATGAATGAAGACACATGGATTCTGGGGACACCAGAACCCACAGTGGGCTCTGTATGGCACCAGAGTCTCTGTCATCATCAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTaGGTGGGTGATGCCTGCTGTGACCACAAGAGGTTCAGACAAGAA +
Preference number: 1 (lower is better)
Translates to: HACFLCPAISLLSAK*VGDACCDHKRFRQE
Trigger: TTCTTGTCTGAACCTCTTGTGGTCACAGCAGGCATCACCCACCCACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp CAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAAACCTCTCTaGATACTGCCCTTGGGGACCTCAGGAGGGAGTGGGACTGATTGG +
Preference number: 1 (lower is better)
Translates to: QWRVYQIEIKRRKPL*ILPLGTSGGSGTDW
Trigger: CCAATCAGTCCCACTCCCTCCTGAGGTCCCCAAGGGCAGTATTCAGAGAGGTTTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp GGTTGGGGAATCGATCCTTGGCTATGGCCTACCCACTCCCCTGGCTaGAGAGTGCCAATCATTACAAATCAGCTTCAGCAAACTGAAACA +
Preference number: 1 (lower is better)
Translates to: GWGIDPWLWPTHSPG*RVPIITNQLQQTET
Trigger: TGTTTCAGTTTGCTGAAGCTGATTTGTAATGATTGGCACTCTTCAGCCAGGGGAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GACAGAAGATCGGGCAGAGGTCAACCAGAAGGCCACACAGGGCAGTaGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAA +
Preference number: 1 (lower is better)
Translates to: DRRSGRGQPEGHTGQ*TTVEGIPNRNKTQE
Trigger: TTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGTGTGGCCTTCTGGTTGACCTCTGCCCGATCTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp GATGCAAACCTACGTCTGTGTTTAAAAGCAGCTGGTCTCAGGATCTaGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGT +
Preference number: 1 (lower is better)
Translates to: DANLRLCLKAAGLRI*VLVRALPQACFFIC
Trigger: ACAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGACCAGCTGCTTTTAAACACAGACGTAGGTTTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp TGGAGCGGAGTGTTTGGGAAATGGCAAAGATTTGTGAGGGCTTCGTaGTTTAGAGATTTGCTACCCTTAACCACCAGCATCAGCTCACCT +
Preference number: 1 (lower is better)
Translates to: WSGVFGKWQRFVRAS*FRDLLPLTTSISSP
Trigger: AGGTGAGCTGATGCTGGTGGTTAAGGGTAGCAAATCTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATTTCCCAAACACTCCGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp AGTTGCTCTGATGACTGGAGACCATGGAGCGGAGTGTTTGGGAAATaGCAAAGATTTGTGAGGGCTTCGTGCTTTAGAGATTTGCTACCC +
Preference number: 1 (lower is better)
Translates to: SCSDDWRPWSGVFGK*QRFVRASCFRDLLP
Trigger: GGGTAGCAAATCTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATTTCCCAAACACTCCGCTCCATGGTCTCCAGTCATCAGAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CATTTCTGTGAAATTGCCCACAATGGGCAGAGGATCATGCCACCTTaGATTTTCAAACCGCAGAGTTGGGATTTGCAGTCAGCAGAGCAC +
Preference number: 1 (lower is better)
Translates to: HFCEIAHNGQRIMPP*IFKPQSWDLQSAEH
Trigger: GTGCTCTGCTGACTGCAAATCCCAACTCTGCGGTTTGAAAATCCAAGGTGGCATGATCCTCTGCCCATTGTGGGCAATTTCACAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp ACATTCTACAATGAGATGCCTCTCTTCATGGGCCTGGGGAAAGGATaGATGAGTGTGGCTGGACTTTTGACCTTTAATGTCCCTGAGCAG +
Preference number: 1 (lower is better)
Translates to: TFYNEMPLFMGLGKG*MSVAGLLTFNVPEQ
Trigger: CTGCTCAGGGACATTAAAGGTCAAAAGTCCAGCCACACTCATTCATCCTTTCCCCAGGCCCATGAAGAGAGGCATCTCATTGTAGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp GAGGTTCAGACAAGAAAGCAATCAATGGGAATTAGCATTCATTCATaGGAGCTAGCAGGTGGCCAAGCCCAGACAAGGGCAGTCTCCATT +
Preference number: 1 (lower is better)
Translates to: EVQTRKQSMGISIHS*ELAGGQAQTRAVSI
Trigger: AATGGAGACTGCCCTTGTCTGGGCTTGGCCACCTGCTAGCTCTCATGAATGAATGCTAATTCCCATTGATTGCTTTCTTGTCTGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp CCTTCTTTGGAGGATCCACTGTCCTGTAGGAGTTTGCAGTTTTGCTaGGGAGTCAGCAGTCGCACAGGGAGAGAAATGGTTATGAAGAAA +
Preference number: 1 (lower is better)
Translates to: PSLEDPLSCRSLQFC*GVSSRTGREMVMKK
Trigger: TTTCTTCATAACCATTTCTCTCCCTGTGCGACTGCTGACTCCTCAGCAAAACTGCAAACTCCTACAGGACAGTGGATCCTCCAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp ATGATGACAGAGACTCTGGTGCCATACAGAGCCCACTGTGGGTTCTaGTGTCCCCAGAATCCATGTGTCTTCATTCATTCACCTAAACTT +
Preference number: 1 (lower is better)
Translates to: MMTETLVPYRAHCGF*CPQNPCVFIHSPKL
Trigger: AAGTTTAGGTGAATGAATGAAGACACATGGATTCTGGGGACACCAGAACCCACAGTGGGCTCTGTATGGCACCAGAGTCTCTGTCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp CCCTTACTAACTAGCTACTTCCAGGGGACCAGGCCCAGTGATGGGTaGTTTCCATGTGAACTTAATGTTGCTCACAATCTAGGAAATAGG +
Preference number: 1 (lower is better)
Translates to: PLLTSYFQGTRPSDG*FPCELNVAHNLGNR
Trigger: CCTATTTCCTAGATTGTGAGCAACATTAAGTTCACATGGAAATCACCCATCACTGGGCCTGGTCCCCTGGAAGTAGCTAGTTAGTAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp CTCCTCTTTGTGCCTTCTCAATTCTGTCGGTGCCAAATCTCCGTCTaGTTTCCTCTTATAAAGATATGTGTGACGGCATTTAGGGCCCAA +
Preference number: 1 (lower is better)
Translates to: LLFVPSQFCRCQISV*FPLIKICVTAFRAQ
Trigger: TTGGGCCCTAAATGCCGTCACACATATCTTTATAAGAGGAAAGCAGACGGAGATTTGGCACCGACAGAATTGAGAAGGCACAAAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp GTCAACAATACAATAATCACAGATTTCTTAACTCAACTGCTTGTCTaGCAATTAAGCAGAAGGGAACCTTTCCCTCCTGCTGATGGCCCT +
Preference number: 1 (lower is better)
Translates to: VNNTIITDFLTQLLV*QLSRREPFPPADGP
Trigger: AGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCTGCTTAATTGTCAGACAAGCAGTTGAGTTAAGAAATCTGTGATTATTGTATTGTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 90 bp TTTAATGTGGATTTAATAGCAGCCATTTGTTTAGTAGCCCCTCTGTaGCAGCTACTGTCCACATATGACCTTACTGAATCCTTGTCACAG +
Preference number: 1 (lower is better)
Translates to: FNVDLIAAICLVAPL*QLLSTYDLTESLSQ
Trigger: CTGTGACAAGGATTCAGTAAGGTCATATGTGGACAGTAGCTGGCACAGAGGGGCTACTAAACAAATGGCTGCTATTAAATCCACATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 90 bp CTAGATCAGCAATGCCCCAAATTGTTGAATCGTGGTGATCACATTTaGATGGACAAGTTAGGAAACTTAGCTGATTCTCTGAGATACTTC +
Preference number: 1 (lower is better)
Translates to: LDQQCPKLLNRGDHI*MDKLGNLADSLRYF
Trigger: GAAGTATCTCAGAGAATCAGCTAAGTTTCCTAACTTGTCCATCCAAATGTGATCACCACGATTCAACAATTTGGGGCATTGCTGATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 90 bp ATGCTCTTCATAGATGTTACCTTTTTACCTCATGTATTGGTTCCCTaGGATTGCTGTAATGACATACCACAAACTTGGGGGCTTAACACA +
Preference number: 1 (lower is better)
Translates to: MLFIDVTFLPHVLVP*DCCNDIPQTWGLNT
Trigger: TGTGTTAAGCCCCCAAGTTTGTGGTATGTCATTACAGCAATCTCAGGGAACCAATACATGAGGTAAAAAGGTAACATCTATGAAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGCTGGGGAAGCCAGCTaGGCCAGACCAGGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAAGEAS*ARPGRS
Trigger: GCTCCTTCCTGGTCTGGCCCAGCTGGCTTCCCCAGC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGGCCTCCTGGTATTCGTaGGACCACCTGTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWASWYS*DHLWAQ
Trigger: CTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGC...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CAA 90 bp TGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTaGTCATATCCATGCCCTGGCTCTGGCCCCGGTGAGCACTTGTGC +
Preference number: 2 (lower is better)
Translates to: CYWRCPVRAVSRLPC*SYPCPGSGPGEHLC
Trigger: GCACAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGGCACGGCCTCCCCATaGCCAGACCCAGGCCCAAAC +
Preference number: 2 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRGTASP*PDPGPN
Trigger: GTTTGGGCCTGGGTCTGGGCATGGGGAGGCCGTGCC...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGCAATGGGATATTCCTaGTCTGTATGGCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAAMGYS*SVWPLG
Trigger: ACCCAGAGGCCATACAGAGCAGGAATATCCCATTGC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGACCAGGAAGGAGCCTaGGGCACAGCACCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: PARASTDSLCNLEQAPLGDQEGA*GTAPRH
Trigger: ATGCCTTGGTGCTGTGCCTCAGGCTCCTTCCTGGTC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCTCAATGGTGGCCTCCTaGTATTCGTGGGACCACCTG +
Preference number: 2 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCSMVAS*YSWDHL
Trigger: CAGGTGGTCCCACGAATACCAGGAGGCCACCATTGA...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR CCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCAGGGCTGGGGAACTaGGGACTGGTTAGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSAGLGN*GLVRLD
Trigger: GTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR CCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACAGATGGCACTCATCCCTaGCTGGCTCCTGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETDGTHP*LAPGPR
Trigger: CCTGGGCCCAGGAGCCAGCCAGGGATGAGTGCCATC...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp GAAATGGAAGTCACAGCAGGGCTGGGGAACTGGGGACTGGTTAGGTaGGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: EMEVTAGLGNWGLVR*DPWVQHPPNWCQSL
Trigger: CAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR GCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGGTTGGACCCATGGGTaGAGCACCCTCCAAACTGGT +
Preference number: 2 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSGWTHG*STLQTG
Trigger: ACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR GCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGACTAGGCTGCTTTTACTaGCATGGGGGCTGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: PARASTDSLCNLEQAPLGLGCFY*HGGCLV
Trigger: GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAG...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGTCATCCTCCTCAAGCTaGCTGCTATCAGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWSSSSS*LLSAGE
Trigger: TTCTCCTGCTGATAGCAGTCAGCTTGAGGAGGATGA...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR-3UTR CCA 90 bp ATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTCAGCCCAGGGAGACTaGTTTCAGGAGCTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: MVASWYSWDHLWAQEPMWSAQGD*FQELFL
Trigger: AAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCTGA...CCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR CCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGACCCTCGCCCTGGATGTaGCAAAAGATACCACACCGA +
Preference number: 2 (lower is better)
Translates to: PARASTDSLCNLEQAPLGPSPWM*QKIPHR
Trigger: TCGGTGTGGTATCTTTTGCCACATCCAGGGCGAGGG...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGATCTGAATACTGCCCTTaGGGACCTCAGGAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: PARASTDSLCNLEQAPLGSEYCP*GPQEGV
Trigger: CACTCCCTCCTGAGGTCCCCAAGGGCAGTATTCAGA...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp CCAAGCAGAACACCCTGGCCCTACAGACCTGTGTCTGAGCAGGCTTaGGAGGAAAGGCCACTTCTGAGTCCTCTGTCTCAGGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PSRTPWPYRPVSEQA*EERPLLSPLSQEKP
Trigger: TGGCTTCTCCTGAGACAGAGGACTCAGAAGTGGCCTTTCCTCCAAAGCCTGCTCAGACACAGGTCTGTAGGGCCAGGGTGTTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGATCCCTCTCCAGATACTaGGGAAAGTGGGTTGGAGGT +
Preference number: 2 (lower is better)
Translates to: PARASTDSLCNLEQAPLGSLSRY*GKWVGG
Trigger: ACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGA...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCATTGCTCAGAATACAGTaGCCAGGCCCGCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSLLRIQ*PGPPGH
Trigger: ATGCCCAGGCGGGCCTGGGCACTGTATTCTGAGCAA...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCACCACGGCCTGGAGCCTaGGTTTATTGGAGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSPRPGA*VYWRVL
Trigger: AAGCACCCTCCAATAAACCCAGGCTCCAGGCCGTGG...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGCTGGGGCTGGATGCTaGACTCTGATTCCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: SALFGRGSQERPRHHPIHAGAGC*TLIPSE
Trigger: CTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp GGAGGTAAGAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTaGCTGTGGTTGGGGAATCGATCCTTGGCTATGGCCTACCCACTC +
Preference number: 2 (lower is better)
Translates to: GGKRGLVISGGRVLP*LWLGNRSLAMAYPL
Trigger: GAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTCTTACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp AGGGAGGGAGGTAAGAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTaGCCTTTGCTGTGGTTGGGGAATCGATCCTTGGCTATGGCCTAC +
Preference number: 2 (lower is better)
Translates to: REGGKRGLVISGGRV*PLLWLGNRSLAMAY
Trigger: GTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTCTTACCTCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp GCCCACAGCAGGACAAGCAACTCTTGTCTAAGGGCAGTGCTCTCTTaGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACA +
Preference number: 2 (lower is better)
Translates to: AHSRTSNSCLRAVLS*DEVVKRDQGTTPST
Trigger: TGTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACTGCCCTTAGACAAGAGTTGCTTGTCCTGCTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp CTTGGCTTGGGGCGGCCATCACCAGTCTCTGCCTCTGTGCTCACATaGACTCTCCTCCTCTTTGTGCCTTCTCAATTCTGTCGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: LGLGRPSPVSASVLT*TLLLFVPSQFCRCQ
Trigger: TTGGCACCGACAGAATTGAGAAGGCACAAAGAGGAGGAGAGTCAATGTGAGCACAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGGGCCAGGCACAGTCTaGGTGGAGAGCCATGATGGC +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHGPGTV*VESHDG
Trigger: GCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGGCCATGGGGGCTGCCTaGTCCCTGAGTAAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVAMGAA*SLSKQW
Trigger: CCACTGCTTACTCAGGGACCAGGCAGCCCCCATGGC...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGCAGCCCCCACGGCCTaGAGCCTGGGTTTATTGGAG +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHAAPTA*SLGLLE
Trigger: CTCCAATAAACCCAGGCTCCAGGCCGTGGGGGCTGC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGAGGCAGCACGAGGGCTaGCATCTCTCCTTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVRQHEG*HLSFQP
Trigger: GGGCTGGAAGGAGAGATGCCAGCCCTCGTGCTGCCT...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCACTCAGCTTCTCAGCTTaGGGAAGGAGGAGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSLSFSA*GRRRFR
Trigger: CCTGAACCTCCTCCTTCCCCAAGCTGAGAAGCTGAG...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp GAGCCAGAAATCATCCCCTGGAGATACTCAGACACTGTATTGTTATaGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTC +
Preference number: 2 (lower is better)
Translates to: EPEIIPWRYSDTVLL*ALSCEGSVQAALLV
Trigger: GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATACAGTGTCTGAGTATCTCCAGGGGATGATTTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp TCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATCGATCCTaGGCTATGGCCTACCCACTCCCCTGGCTGAAGAGTGCCAATCAT +
Preference number: 2 (lower is better)
Translates to: SGGRVLPLLWLGNRS*AMAYPLPWLKSANH
Trigger: ATGATTGGCACTCTTCAGCCAGGGGAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp CAGAAATGGCAGCTTCATTCCTGGAATCCTTACCCTCTGGGTGTCTaGTCCCAGGTTGCCCCTCTCCTTGCAGATGGCTGCCTAATCCTC +
Preference number: 2 (lower is better)
Translates to: QKWQLHSWNPYPLGV*SQVAPLLADGCLIL
Trigger: GAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAAGGATTCCAGGAATGAAGCTGCCATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCCTCGCTGTGCAACCTTaGGCAAGCCCCACTAGGAAC +
Preference number: 2 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLLAVQP*ASPTRN
Trigger: GTTCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAG...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGCTCCTTGCAGATGGCTaGCTAATCCTCCAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLLLADG*LILQEP
Trigger: TGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAG...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCACCAGAGCCATGTCCCTaGATATTGTCCTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSPEPCP*ILSSSS
Trigger: AGAGCTGGAGGACAATATCCAGGGACATGGCTCTGG...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGCCCACTGTGGGTTCTaGTGTCCCCAGAATCCATGT +
Preference number: 2 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLAHCGF*CPQNPC
Trigger: ACATGGATTCTGGGGACACCAGAACCCACAGTGGGC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp GACAAAGAGCCAGAAATCATCCCCTGGAGATACTCAGACACTGTATaGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: DKEPEIIPWRYSDTV*LLALSCEGSVQAAL
Trigger: CAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATACAGTGTCTGAGTATCTCCAGGGGATGATTTCTGGCTCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGAACCTCTCTGAATACTaGCCTTGGGGACCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLNLSEY*PWGPQE
Trigger: CTCCTGAGGTCCCCAAGGGCAGTATTCAGAGAGGTT...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTGCACTCATCCCTGGCTaGCTCCTGGGCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTALIPG*LLGPGP
Trigger: AGGGCCTGGGCCCAGGAGCCAGCCAGGGATGAGTGC...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGGAGCCTGGGTTTATTaGAGGGTGCTTTCTTACCCT +
Preference number: 2 (lower is better)
Translates to: SALFGRGSQERPRHHPIHGAWVY*RVLSYP
Trigger: AGGGTAAGAAAGCACCCTCCAATAAACCCAGGCTCC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAGAGGGAGGGCTGGTTTaGCTCAACCCTCGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPEGGLV*LNPRPG
Trigger: TCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTC...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAACTTGACCTGGTGATCTaGGCTGTGTTTGTCCTAGTA +
Preference number: 2 (lower is better)
Translates to: RREPFPPADGPGGCRDDKLDLVI*AVFVLV
Trigger: TACTAGGACAAACACAGCTCAGATCACCAGGTCAAG...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGATGCTGGAAAAGGCTaGTCCTCACCTCGAGTTCCA +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHDAGKG*SSPRVP
Trigger: TGGAACTCGAGGTGAGGATCAGCCTTTTCCAGCATC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCACGGCTAGATCAGCAATaGCCCAAATTGTTGAATCGT +
Preference number: 2 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSRLDQQ*PKLLNR
Trigger: ACGATTCAACAATTTGGGGCATTGCTGATCTAGCCG...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGTCTACTGACTCGCTGTaGAACCTTGAGCAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVSTDSL*NLEQAP
Trigger: TGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGA...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATCTTCAGAAAGGACGATaGAAATGGAAGTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHLQKGR*KWKSQQ
Trigger: CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAG...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAAGAAAGGAGGATCAGGTaGGGTCAAAACCAAAGCATC +
Preference number: 2 (lower is better)
Translates to: RREPFPPADGPGGCRDDKERRIR*GQNQSI
Trigger: GATGCTTTGGTTTTGACCCCACCTGATCCTCCTTTC...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAAGTAGGGGGAGGATCTaGCTGACTCAGCCCCAACCG +
Preference number: 2 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPSRGRI*LTQPQP
Trigger: CGGTTGGGGCTGAGTCAGCCAGATCCTCCCCCTACT...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGTGTTGCCTTTGCTGTaGTTGGGGAATCGATCCTTG +
Preference number: 2 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLVLPLL*LGNRSL
Trigger: CAAGGATCGATTCCCCAACCACAGCAAAGGCAACAC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCACTGAGTGGAGAGCCATaGTGGCACTCATCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPLSGEP*WHSSLA
Trigger: AGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAG...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGAAGGAGGGAGTGGGACTaGTTGGAGACAAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGRREWD*LETKSQ
Trigger: CTGGCTCTTTGTCTCCAATCAGTCCCACTCCCTCCT...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCTCAGCTTCAGCAAACTaGAACAAACCTTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLSASAN*NKPSGA
Trigger: GGCACCAGAAGGTTTGTTTCAGTTTGCTGAAGCTGA...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCAGGCCCGCCTGGGCATTaGCTTAATTCCTGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: YLGQESVLPFCYPSLITPGPPGH*LNSCLR
Trigger: CCTCAGACAGGAATTAAGGCAATGCCCAGGCGGGCC...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGGAATCTGTAAGAAATaGAGAGTCCTAGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHGICKK*RVLGPT
Trigger: GGTGGGGCCTAGGACTCTGCATTTCTTACAGATTCC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACTTCCTGCTCCCAGTCTaGCTGCCATACGTTAGACAA +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHFLLPV*LPYVRQ
Trigger: TTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAA...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAAATGGGCAGAGGATCATaGCACCTTGGATTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: RREPFPPADGPGGCRDDKMGRGS*HLGFSN
Trigger: GTTTGAAAATCCAAGGTGGCATGATCCTCTGCCCAT...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACTGTTCCAGCTGGGGCTaGATGCTGGACTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYCSSWG*MLDSDS
Trigger: GGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACA...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGATTCAGCTGTTCCAGCTaGGGCTGGATGCTGGACTCT +
Preference number: 2 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGFSCSS*GWMLDS
Trigger: AGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACTGGGGAATCGATCCTTaGCTATGGCCTACCCACTCC +
Preference number: 2 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYWGIDP*LWPTHS
Trigger: GGAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCA...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGTGCCTTTGCTGTGGTTaGGGAATCGATCCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVCLCCG*GIDPWL
Trigger: TAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCA...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGTTAGGAAACTTAGCTaGTTCTCTGAGATACTTCCC +
Preference number: 2 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLVRKLS*FSEILP
Trigger: GGGAAGTATCTCAGAGAATCAGCTAAGTTTCCTAAC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTCTGGAGGAAGAGTGTTaGCTTTGCTGTGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGLEEEC*LCCGWG
Trigger: TCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAG...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGAAGGAGCCCCAAACCTaGAGTGAGACCTTTGACTTT +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVKEPQT*SETFDF
Trigger: AAAGTCAAAGGTCTCACTCCAGGTTTGGGGCTCCTT...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTCATCGAGGCTGGCACTaGCCAAGACAGACTCTGGCA +
Preference number: 2 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTHRGWH*PRQTLA
Trigger: TGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATG...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCATGGATTGGTACCAAGTaGGGCCAGCCAGGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: YLGQESVLPFCYPSLITPWIGTK*GQPGLL
Trigger: TAGAAGCCCTGGCTGGCCCCACTTGGTACCAATCCA...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp TGGATGCATGTTAAAGTTGGAGAAGCTGCCCTAAGTGACAACCCTTaGCCTTTTCAGGACTTTGCCTCTTTCCACAGAGCTGCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: WMHVKVGEAALSDNP*PFQDFASFHRAAGS
Trigger: AGAACCTGCAGCTCTGTGGAAAGAGGCAAAGTCCTGAAAAGGCAAAGGGTTGTCACTTAGGGCAGCTTCTCCAACTTTAACATGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTGCTAAGGGCACTGAGTaGTTACAGGGCAAGGCCACA +
Preference number: 2 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTAKGTE*LQGKAT
Trigger: TGTGGCCTTGCCCTGTAATCACTCAGTGCCCTTAGC...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACAATGGCAAAGATTTGTaGGGGCTTCGTGCTTTAGAG +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHNGKDL*GLRALE
Trigger: CTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATT...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTTGGAGGAGGGGGCAATaGGATATTCCTGCTCTGTAT +
Preference number: 2 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGWRRGQ*DIPALY
Trigger: ATACAGAGCAGGAATATCCCATTGCCCCCTCCTCCA...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTAGGTGCTTGACCTGGTaGTCTGAGCTGTGTTTGTCC +
Preference number: 2 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTRCLTW*SELCLS
Trigger: GGACAAACACAGCTCAGATCACCAGGTCAAGCACCT...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGTCATACATTCTACAATaGGATGCCTCTCTTCATGGG +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVSYILQ*DASLHG
Trigger: CCCATGAAGAGAGGCATCTCATTGTAGAATGTATGA...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR TCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACCCATCTGTCCTGGAATaGGGATCTGATGATGACAGA +
Preference number: 2 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYPSVLE*GSDDDR
Trigger: TCTGTCATCATCAGATCCTCATTCCAGGACAGATGG...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTCCCGGTGAGCACTTGTaGTGCATGAGGAAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVPGEHL*CMRKGG
Trigger: TCCTCCTTTCCTCATGCAGCACAAGTGCTCACCGGG...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGCTAATGACAGGAAAGTaGGCTTATCCTCAACCTTTC +
Preference number: 2 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVLMTGK*AYPQPF
Trigger: GAAAGGTTGAGGATAAGCCCACTTTCCTGTCATTAG...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAATTTTCTTTTATGTGCTaGGTTCTGTCAGATCACATG +
Preference number: 2 (lower is better)
Translates to: RREPFPPADGPGGCRDDKFSFMC*VLSDHM
Trigger: CATGTGATCTGACAGAACCCAGCACATAAAAGAAAA...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 90 bp CACCCTGGAGAAGTAAGTGGCCAAAACAAACACATTTCTGTGAAATaGCCCACAATGGGCAGAGGATCATGCCACCTTGGATTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: HPGEVSGQNKHISVK*PTMGRGSCHLGFSN
Trigger: GTTTGAAAATCCAAGGTGGCATGATCCTCTGCCCATTGTGGGCAATTTCACAGAAATGTGTTTGTTTTGGCCACTTACTTCTCCAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACTCAGTTCTCCCTTTCTaGTATCCATCACTTATAACC +
Preference number: 2 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHSVLPF*YPSLIT
Trigger: GGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGA...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR GCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACTTGTTTTCTGTGCCCTaGCATATCCCTACTAAGTGC +
Preference number: 2 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYLFSVP*HIPTKC
Trigger: GCACTTAGTAGGGATATGGCAGGGCACAGAAAACAA...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTTCAGCCCAGGGAGACTaGTTTCAGGAGCTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVSAQGD*FQELFL
Trigger: AAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCTGA...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTCTGAAACAAACCTTCTaGTGCCTTGGGCTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVLKQTF*CLGLWG
Trigger: GCCCCAAAGCCCAAGGCACCAGAAGGTTTGTTTCAG...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTATGGAGCGGAGTGTTTaGGAAATGGCAAAGATTTGT +
Preference number: 2 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVMERSV*EMAKIC
Trigger: ACAAATCTTTGCCATTTCCCAAACACTCCGCTCCAT...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTTTCCCATTTTATAGATaGAACTATGGCAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVFPFYR*NYGSRT
Trigger: AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAA...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp TGCAGCACCCTCCAAACTGGTGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGAT +
Preference number: 3 (lower is better)
Translates to: CSTLQTGVRACR*VPGGAALQEAD
Trigger: ATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGACACCAGTTTGGAGGGTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR TCA 72 bp TCCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATaGCGGAGACAGACAACCCAATGGCAGGGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSVSRTEQGPSP*RRQTTQWQGLG
Trigger: CCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR GCA 72 bp TCAGAGCCTGCAGATGAGTCCCGGGAGGAGCGGCCCTaGAGGAAGCGGATGATCTTCTCAATGGTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SEPADESREERP*RKRMIFSMVAS
Trigger: GGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR GCA 72 bp AGAACCCACCTGTGTCTGGTTCCTCATGTCCAGTGCTaGCCGAAACGGGCTGATGGGCAGCCATGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RTHLCLVPHVQC*PKRADGQPWLG
Trigger: CCCCAGCCATGGCTGCCCATCAGCCCGTTTCGGGCAGCACTGGACATGAGGAACCAGACACAGGTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GGGCTGGGGAACTGGGGACTGGTTAGGTTGGACCCATaGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: GLGNWGLVRLDP*VQHPPNWCQSL
Trigger: CAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 72 bp CCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTaGGGGAGTTCTAACCTCCCGTGCCCAAGCCTGACT +
Preference number: 3 (lower is better)
Translates to: PHDGDRQPNGRA*GSSNLPCPSLT
Trigger: AGTCAGGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR CCA 72 bp GGGGTAGCAGCTGCAGCCCAGCCAAGCAGAACACCCTaGCCCTACAGACCTGTGTCTGAGCAGGCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: GVAAAAQPSRTP*PYRPVSEQALE
Trigger: CTCCAAAGCCTGCTCAGACACAGGTCTGTAGGGCCAGGGTGTTCTGCTTGGCTGGGCTGCAGCTGCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp ATGAGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGATaGTCTTCTCAATGGTGGCCTCCTGGTATTCGTGGG +
Preference number: 3 (lower is better)
Translates to: MSPGRSGPAGSG*SSQWWPPGIRG
Trigger: CCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR GCA 72 bp CCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTaGCCAAGCCTGACTTCCCTTCCCTCTCCAGATACT +
Preference number: 3 (lower is better)
Translates to: PNGRAWGSSNLP*PSLTSLPSPDT
Trigger: AGTATCTGGAGAGGGAAGGGAAGTCAGGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR CCA 72 bp TCACAGCAGGGCTGGGGAACTGGGGACTGGTTAGGTTaGACCCATGGGTGCAGCACCCTCCAAACTGGTGTC +
Preference number: 3 (lower is better)
Translates to: SQQGWGTGDWLG*THGCSTLQTGV
Trigger: GACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 72 bp TCTTCCAGCTTCTGGGGCTGCTGGCATTCCTTGGCTTaGGGCGGCCATCACCAGTCTCTGCCTCTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: SSSFWGCWHSLA*GGHHQSLPLCS
Trigger: TGAGCACAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACAAGAGGGAGGGCTGGTTaGCCTCAACCCTCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETRGRAG*PQPSPW
Trigger: CCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCT...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CAAGTGGGGCCAGCCAGGGCTTCTACTGACTCGCTGTaGAACCTTGAGCAAGCCCCACTAGGAACGGCTAGA +
Preference number: 3 (lower is better)
Translates to: QVGPARASTDSL*NLEQAPLGTAR
Trigger: TCTAGCCGTTCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGGCCCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp AGCACGAGGGCTGGCATCTCTCCTTCCAGCCCAAACTaGACAGCCCCAACCAGGTTCCCAACACGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: STRAGISPSSPN*TAPTRFPTRVA
Trigger: TGCTACACGTGTTGGGAACCTGGTTGGGGCTGTGCAGTTTGGGCTGGAAGGAGAGATGCCAGCCCTCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp ACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTaGGCAGAGGGAGCTGCTAGTCAGCTGTTTGCCCAC +
Preference number: 3 (lower is better)
Translates to: TCGHRSQCGSDS*AEGAASQLFAH
Trigger: GTGGGCAAACAGCTGACTAGCAGCTCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 72 bp TCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTaGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: SMVASWYSWDHL*AQEPMWFRQLG
Trigger: GCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR-3UTR CAA 90 bp ACTGGGGACTGGTTAGGTTGGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCCTGCTAGTCAGCTGTTaGCCCACACTCTGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: TGDWLGWTHGCSTLQTGVLLVSC*PTLCLS
Trigger: TGACAGGCAGAGTGTGGGCAAACAGCTGACTAGCAG...GACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR TCA 72 bp CAGGTGCACCTTCAGGAGACTGGCCAGCTGGGAACCTaGGTTCCGGCGGTAGCTGATGAAGACATCTGGAGT +
Preference number: 3 (lower is better)
Translates to: QVHLQETGQLGT*VPAVADEDIWS
Trigger: ACTCCAGATGTCTTCATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
3UTR TCA 72 bp CTGGAGGCCAGAAGTCCAAAGTCAGTACCACCGGGCTaGATGGAAGCAGTCAGCAGGCAGTGCTCCCTTGCA +
Preference number: 3 (lower is better)
Translates to: LEARSPKSVPPG*MEAVSRQCSLA
Trigger: TGCAAGGGAGCACTGCCTGCTGACTGCTTCCATTCAGCCCGGTGGTACTGACTTTGGACTTCTGGCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp TGCCTCTTTCCACAGAGCTGCAGGTTCTGTCTAGGCTaGTTTTACTGCCATGGGGGCTGCCTGGTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: CLFPQSCRFCLG*FYCHGGCLVPE
Trigger: CTCAGGGACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTGTGGAAAGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp TATCCATGCCCTGGCTCTGGCCCCGGTGAGCACTTGTaGTGCATGAGGAAAGGAGGATCAGGTGGGGTCAAA +
Preference number: 3 (lower is better)
Translates to: YPCPGSGPGEHL*CMRKGGSGGVK
Trigger: TTTGACCCCACCTGATCCTCCTTTCCTCATGCAGCACAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp TGGGCTTTGGGGCCCTCTGTTTTCCTGCTCCCAGTCTaGCTGCCATACGTTAGACAACAGAAGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: WALGPSVFLLPV*LPYVRQQKLLG
Trigger: GCCCAGCAGCTTCTGTTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAAAACAGAGGGCCCCAAAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp GTCTTGTCCCAGGTTGCCCCTCTCCTTGCAGATGGCTaGCTAATCCTCCAGGAGCCATTTTCCAAGGGCGAG +
Preference number: 3 (lower is better)
Translates to: VLSQVAPLLADG*LILQEPFSKGE
Trigger: CTCGCCCTTGGAAAATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CCCTCTGGGTGTCTTGTCCCAGGTTGCCCCTCTCCTTaGAGATGGCTGCCTAATCCTCCAGGAGCCATTTTC +
Preference number: 3 (lower is better)
Translates to: PSGCLVPGCPSP*RWLPNPPGAIF
Trigger: GAAAATGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp TGCAGGAAGCGGATGATCTTCTCAATGGTGGCCTCCTaGTATTCGTGGGACCACCTGTGGGCACAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: CRKRMIFSMVAS*YSWDHLWAQEP
Trigger: TGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 72 bp GTCAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTaGATGTGGCAAAAGATACCACACCGAAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: VRGRAGLPQPSP*MWQKIPHRRKL
Trigger: CAGCTTCCTTCGGTGTGGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCTaGGTTTATTGGAGGGTGCTTTCTTACCCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: GKSLQQPPRPGA*VYWRVLSYPLN
Trigger: GTTCAGAGGGTAAGAAAGCACCCTCCAATAAACCCAGGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp TCATTTCTTCCAGCTTCTGGGGCTGCTGGCATTCCTTaGCTTGGGGCGGCCATCACCAGTCTCTGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: SFLPASGAAGIP*LGAAITSLCLC
Trigger: ACAGAGGCAGAGACTGGTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp CTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTaGTTCCCTCAGAGAGACAGAAGATCGGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LQLFQLGLDAGL*FPQRDRRSGRG
Trigger: ACCTCTGCCCGATCTTCTGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp TCTGAGGCTGCCTTCCGTCATCCTCCTCAAGCTGACTaGTATCAGCAGGAGAAGGGAATGCAGAACCACCCC +
Preference number: 3 (lower is better)
Translates to: SEAAFRHPPQAD*YQQEKGMQNHP
Trigger: GGGGTGGTTCTGCATTCCCTTCTCCTGCTGATAGCAGTCAGCTTGAGGAGGATGACGGAAGGCAGCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR GCA 72 bp TTGCTCAGAATACAGTGCCCAGGCCCGCCTGGGCATTaGCTTAATTCCTGTCTGAGGCTGCCTTCCGTCATC +
Preference number: 3 (lower is better)
Translates to: LLRIQCPGPPGH*LNSCLRLPSVI
Trigger: GATGACGGAAGGCAGCCTCAGACAGGAATTAAGGCAATGCCCAGGCGGGCCTGGGCACTGTATTCTGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
3UTR GCA 72 bp CTGGAATCCTTACCCTCTGGGTGTCTTGTCCCAGGTTaGCCCTCTCCTTGCAGATGGCTGCCTAATCCTCCA +
Preference number: 3 (lower is better)
Translates to: LESLPSGCLVPG*PSPCRWLPNPP
Trigger: TGGAGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTAAGGATTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp GTGACTACTCCCGGTCACACAGCTGTGAGGTGGTGGTaGCAGAGTTGGAATATGGCCCTTTCGGACTCCAGA +
Preference number: 3 (lower is better)
Translates to: VTTPGHTAVRWW*QSWNMALSDSR
Trigger: TCTGGAGTCCGAAAGGGCCATATTCCAACTCTGGCACCACCACCTCACAGCTGTGTGACCGGGAGTAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp CAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTaGGGAACTGGGGACTGGTTAGGTTGGACCCATGGG +
Preference number: 3 (lower is better)
Translates to: QKGRWKWKSQQG*GTGDWLGWTHG
Trigger: CCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
3UTR CCA 72 bp GGCTTAGAGGAGGCTTGTGACTTCAGCTGTTCCAGCTaGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: GLEEACDFSCSS*GWMLDSDSLRE
Trigger: CTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACAAGCCTCCTCTAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp CCAGGAGAGAACGTGTTTCTCATTTCTTCCAGCTTCTaGGGCTGCTGGCATTCCTTGGCTTGGGGCGGCCAT +
Preference number: 3 (lower is better)
Translates to: PGENVFLISSSF*GCWHSLAWGGH
Trigger: ATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGAAATGAGAAACACGTTCTCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp GGCCAAGCCCAGACAAGGGCAGTCTCCATTCCTCCTTaGCTACTGTCTTCCCACCCTCACCATCAAGGAAGT +
Preference number: 3 (lower is better)
Translates to: GQAQTRAVSIPP*LLSSHPHHQGS
Trigger: ACTTCCTTGATGGTGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp CAGACCTCAGCTTTTCCGTCTGTAAGATGGGTGTGGTaGTGCCAGAGTTCCCTGTTTCTCTGGGGTCAGCGT +
Preference number: 3 (lower is better)
Translates to: QTSAFPSVRWVW*CQSSLFLWGQR
Trigger: ACGCTGACCCCAGAGAAACAGGGAACTCTGGCATCACCACACCCATCTTACAGACGGAAAAGCTGAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CCACCAGCATCAGCTCACCTGGGAATCTGTAAGAAATaGAGAGTCCTAGGCCCCACCCCAGATCTCCTGATT +
Preference number: 3 (lower is better)
Translates to: PPASAHLGICKK*RVLGPTPDLLI
Trigger: AATCAGGAGATCTGGGGTGGGGCCTAGGACTCTGCATTTCTTACAGATTCCCAGGTGAGCTGATGCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CTGAACCCAGTGGAGGAGGGGGCAATGGGATATTCCTaGTCTGTATGGCCTCTGGGTCAGCTTTTTGTTGCA +
Preference number: 3 (lower is better)
Translates to: LNPVEEGAMGYS*SVWPLGQLFVA
Trigger: TGCAACAAAAAGCTGACCCAGAGGCCATACAGAGCAGGAATATCCCATTGCCCCCTCCTCCACTGGGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CTCAGGGCTGACTCCAAAGCCCATGCTTGTTTTCTGTaGCCTGCCATATCCCTACTAAGTGCCAAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LRADSKAHACFL*PAISLLSAKWV
Trigger: CACCCACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTGGAGTCAGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp GGATTTGAGGGGCCTGACACTGCTAGGGTCCCTGGATaGCTCATCGTATACCTTCTTTGGAGGATCCACTGT +
Preference number: 3 (lower is better)
Translates to: GFEGPDTARVPG*LIVYLLWRIHC
Trigger: ACAGTGGATCCTCCAAAGAAGGTATACGATGAGGCATCCAGGGACCCTAGCAGTGTCAGGCCCCTCAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp AAGGAAGTTCTTCCTGGGTCTAACCTAAGCCCCACGTaGGGTATGGATAGGAGCTCTGCTGCCTTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: KEVLPGSNLSPT*GMDRSSAAFPL
Trigger: CAAGGGAAAGGCAGCAGAGCTCCTATCCATACCCCACGTGGGGCTTAGGTTAGACCCAGGAAGAACTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp TTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTaGGTGGGTGATGCCTGCTGTGACCACAAGAGGTTC +
Preference number: 3 (lower is better)
Translates to: FLCPAISLLSAK*VGDACCDHKRF
Trigger: GAACCTCTTGTGGTCACAGCAGGCATCACCCACCCACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTGGGGTAGGGTGGGCTTaGAGGCACGGCCTCCCCATG +
Preference number: 3 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTGVGWA*RHGLPM
Trigger: CATGGGGAGGCCGTGCCTCAAAGCCCACCCTACCCC...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGACACTGTATTGTTATaGGCGCTGTCCTGTGAGGGC +
Preference number: 3 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLDTVLL*ALSCEG
Trigger: GCCCTCACAGGACAGCGCCAATAACAATACAGTGTC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp TTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTaGTTGGGGAATCGATCCTTGGCTATGGCCTACCCA +
Preference number: 3 (lower is better)
Translates to: LVISGGRVLPLL*LGNRSLAMAYP
Trigger: TGGGTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp ACAGGGCAGTGGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAACCTGGGCCCAGGCCCTaGCTCAGAATACAGTGCCCA +
Preference number: 3 (lower is better)
Translates to: TGQWTTVEGIPNRNKTQEPGPRP*LRIQCP
Trigger: TGGGCACTGTATTCTGAGCAAGGGCCTGGGCCCAGG...TTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCTGCCTTTTCAGGACTTaGCCTCTTTCCACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLCLFRT*PLSTEL
Trigger: CAGCTCTGTGGAAAGAGGCAAAGTCCTGAAAAGGCA...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCAGGCCCCGGTGAGCACTaGTGCTGCATGAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: YLGQESVLPFCYPSLITPGPGEH*CCMRKG
Trigger: TCCTTTCCTCATGCAGCACAAGTGCTCACCGGGGCC...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACTACTCAGACACTGTATaGTTATTGGCGCTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: SALFGRGSQERPRHHPIHYSDTV*LLALSC
Trigger: ACAGGACAGCGCCAATAACAATACAGTGTCTGAGTA...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp AGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGTaGTGTGGGTGGTTTGCTTTTGATGACATCACAGAC +
Preference number: 3 (lower is better)
Translates to: SPSPATGLFLHL*CGWFAFDDITD
Trigger: GTCTGTGATGTCATCAAAAGCAAACCACCCACATCACAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp GAGGATCCACTGTCCTGTAGGAGTTTGCAGTTTTGCTaGGGAGTCAGCAGTCGCACAGGGAGAGAAATGGTT +
Preference number: 3 (lower is better)
Translates to: EDPLSCRSLQFC*GVSSRTGREMV
Trigger: AACCATTTCTCTCCCTGTGCGACTGCTGACTCCTCAGCAAAACTGCAAACTCCTACAGGACAGTGGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp CAAATCAGCTTCAGCAAACTGAAACAAACCTTCTGGTaGCTTGGGCTTTGGGGCCCTCTGTTTTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: QISFSKLKQTFW*LGLWGPLFSCS
Trigger: GGAGCAGGAAAACAGAGGGCCCCAAAGCCCAAGGCACCAGAAGGTTTGTTTCAGTTTGCTGAAGCTGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GGGAATCGATCCTTGGCTATGGCCTACCCACTCCCCTaGCTGAAGAGTGCCAATCATTACAAATCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: GNRSLAMAYPLP*LKSANHYKSAS
Trigger: TGAAGCTGATTTGTAATGATTGGCACTCTTCAGCCAGGGGAGTGGGTAGGCCATAGCCAAGGATCGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GAGACTCTGGTGCCATACAGAGCCCACTGTGGGTTCTaGTGTCCCCAGAATCCATGTGTCTTCATTCATTCA +
Preference number: 3 (lower is better)
Translates to: ETLVPYRAHCGF*CPQNPCVFIHS
Trigger: TGAATGAATGAAGACACATGGATTCTGGGGACACCAGAACCCACAGTGGGCTCTGTATGGCACCAGAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp CTAGGATGCAAACCTACGTCTGTGTTTAAAAGCAGCTaGTCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: LGCKPTSVFKSS*SQDLGFSPSPA
Trigger: GGCAGGGCTCGGACTAAAACCCAGATCCTGAGACCAGCTGCTTTTAAACACAGACGTAGGTTTGCATCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp TCGGGCAGAGGTCAACCAGAAGGCCACACAGGGCAGTaGACAACAGTGGAGGGTATACCAAATAGAAATAAA +
Preference number: 3 (lower is better)
Translates to: SGRGQPEGHTGQ*TTVEGIPNRNK
Trigger: TTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGTGTGGCCTTCTGGTTGACCTCTGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp AAATCCAAACTCTCTCTCTGGTCTCTCACAGGATGCTaGAAAAGGCTGATCCTCACCTCGAGTTCCAGCAGT +
Preference number: 3 (lower is better)
Translates to: KSKLSLWSLTGC*KRLILTSSSSS
Trigger: ACTGCTGGAACTCGAGGTGAGGATCAGCCTTTTCCAGCATCCTGTGAGAGACCAGAGAGAGAGTTTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GCTAGGGTCCCTGGATGCCTCATCGTATACCTTCTTTaGAGGATCCACTGTCCTGTAGGAGTTTGCAGTTTT +
Preference number: 3 (lower is better)
Translates to: ARVPGCLIVYLL*RIHCPVGVCSF
Trigger: AAAACTGCAAACTCCTACAGGACAGTGGATCCTCCAAAGAAGGTATACGATGAGGCATCCAGGGACCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp GATGACTGGAGACCATGGAGCGGAGTGTTTGGGAAATaGCAAAGATTTGTGAGGGCTTCGTGCTTTAGAGAT +
Preference number: 3 (lower is better)
Translates to: DDWRPWSGVFGK*QRFVRASCFRD
Trigger: ATCTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATTTCCCAAACACTCCGCTCCATGGTCTCCAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACCCGCTGCTAGATTCTTaGAAGCAAGGGAGAAGCAAT +
Preference number: 3 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYPLLDS*KQGRSN
Trigger: ATTGCTTCTCCCTTGCTTCAAAGAATCTAGCAGCGG...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp TCTGAGATACTTCCCACTTCCTCATACATTCTACAATaGGATGCCTCTCTTCATGGGCCTGGGGAAAGGATG +
Preference number: 3 (lower is better)
Translates to: SEILPTSSYILQ*DASLHGPGERM
Trigger: CATCCTTTCCCCAGGCCCATGAAGAGAGGCATCTCATTGTAGAATGTATGAGGAAGTGGGAAGTATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp ACTAGCTACTTCCAGGGGACCAGGCCCAGTGATGGGTaGTTTCCATGTGAACTTAATGTTGCTCACAATCTA +
Preference number: 3 (lower is better)
Translates to: TSYFQGTRPSDG*FPCELNVAHNL
Trigger: TAGATTGTGAGCAACATTAAGTTCACATGGAAATCACCCATCACTGGGCCTGGTCCCCTGGAAGTAGCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCAAGTGTGGCTGGACTTTaGACCTTTAATGTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: YLGQESVLPFCYPSLITPSVAGL*TFNVPE
Trigger: CTCAGGGACATTAAAGGTCAAAAGTCCAGCCACACT...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR-3UTR CAA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTGGAAGAGTGTTGCCTTaGCTGTGGTTGGGGAATCGA +
Preference number: 3 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVGRVLP*LWLGNR
Trigger: TCGATTCCCCAACCACAGCAAAGGCAACACTCTTCC...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp GTGTTTGGGAAATGGCAAAGATTTGTGAGGGCTTCGTaGTTTAGAGATTTGCTACCCTTAACCACCAGCATC +
Preference number: 3 (lower is better)
Translates to: VFGKWQRFVRAS*FRDLLPLTTSI
Trigger: GATGCTGGTGGTTAAGGGTAGCAAATCTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATTTCCCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR GCA 72 bp GTGCCTTCTCAATTCTGTCGGTGCCAAATCTCCGTCTaGTTTCCTCTTATAAAGATATGTGTGACGGCATTT +
Preference number: 3 (lower is better)
Translates to: VPSQFCRCQISV*FPLIKICVTAF
Trigger: AAATGCCGTCACACATATCTTTATAAGAGGAAAGCAGACGGAGATTTGGCACCGACAGAATTGAGAAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp CAGAGTTGGAATATGGCCCTTTCGGACTCCAGAGTATaGTATTTATTTCTTCACAGGTGCTCTCTTTTCTGC +
Preference number: 3 (lower is better)
Translates to: QSWNMALSDSRV*YLFLHRCSLFC
Trigger: GCAGAAAAGAGAGCACCTGTGAAGAAATAAATACCATACTCTGGAGTCCGAAAGGGCCATATTCCAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp AGGATCATGCCACCTTGGATTTTCAAACCGCAGAGTTaGGATTTGCAGTCAGCAGAGCACAATTATGTTCTT +
Preference number: 3 (lower is better)
Translates to: RIMPPWIFKPQS*DLQSAEHNYVL
Trigger: AAGAACATAATTGTGCTCTGCTGACTGCAAATCCCAACTCTGCGGTTTGAAAATCCAAGGTGGCATGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp GCTAGATCAGCAATGCCCCAAATTGTTGAATCGTGGTaGTCACATTTGGATGGACAAGTTAGGAAACTTAGC +
Preference number: 3 (lower is better)
Translates to: ARSAMPQIVESW*SHLDGQVRKLS
Trigger: GCTAAGTTTCCTAACTTGTCCATCCAAATGTGATCACCACGATTCAACAATTTGGGGCATTGCTGATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp TCTGGAAACATTCATCTTTTTCCATCTGTCCTGGAATaGGGATCTGATGATGACAGAGACTCTGGTGCCATA +
Preference number: 3 (lower is better)
Translates to: SGNIHLFPSVLE*GSDDDRDSGAI
Trigger: TATGGCACCAGAGTCTCTGTCATCATCAGATCCTCATTCCAGGACAGATGGAAAAAGATGAATGTTTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CCA 72 bp CAATGCCCCAAATTGTTGAATCGTGGTGATCACATTTaGATGGACAAGTTAGGAAACTTAGCTGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: QCPKLLNRGDHI*MDKLGNLADSL
Trigger: CAGAGAATCAGCTAAGTTTCCTAACTTGTCCATCCAAATGTGATCACCACGATTCAACAATTTGGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp ATAGATGTTACCTTTTTACCTCATGTATTGGTTCCCTaGGATTGCTGTAATGACATACCACAAACTTGGGGG +
Preference number: 3 (lower is better)
Translates to: IDVTFLPHVLVP*DCCNDIPQTWG
Trigger: CCCCCAAGTTTGTGGTATGTCATTACAGCAATCTCAGGGAACCAATACATGAGGTAAAAAGGTAACATCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR TCA 72 bp AATGGTTATGAAGAAAACAGGAAGCCTGTAAGTAACTaGATGCAAAGGGAAAAGGAACTCCCATTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: NGYEENRKPVSN*MQREKELPFAV
Trigger: CACAGCAAATGGGAGTTCCTTTTCCCTTTGCATTCAGTTACTTACAGGCTTCCTGTTTTCTTCATAACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCCTGCCCGAAACGGGCTaGTGGGCAGCCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGALPETG*WAAMAG
Trigger: CCCAGCCATGGCTGCCCATCAGCCCGTTTCGGGCAG...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCGTGCAGCGCGCAGTTaGCCAGCGCCAGCGCGCAGT +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSRAARS*PAPARS
Trigger: ACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACG...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCGCGGACAAGGCCTaGTGCAGCTCCGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPSADKA*CSSGSA
Trigger: CGCGCTGCCGGAGCTGCAGCAGGCCTTGTCCGCGCT...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCCCCACACAGGCCCACTaGAGGACAGGTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAPTQAH*RTGGRG
Trigger: TCCTCTGCCACCTGTCCTGCAGTGGGCCTGTGTGGG...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGCAGCCCCCACGGCCTaGAGCCTGGGTTTATTGGAG +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAAAPTA*SLGLLE
Trigger: CTCCAATAAACCCAGGCTCCAGGCCGTGGGGGCTGC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCGCGTCGCACAGACCCTaGGCTACCTCGCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSASHRP*ATSRPT
Trigger: CGTGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGC...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGCTGCTGGCATTCCTTaGCTTGGGGCGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAAAGIP*LGAAIT
Trigger: GGTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKEVRACR*VPGGAA
Trigger: GGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGAC...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCACCGCCTGGCCCCCGTaGAGCGCGCAGTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTTAWPP*SAQLPS
Trigger: GCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGT...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCTCTACCATGCGTCGCTaGACCGCCTGGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSSTMRR*TAWPPC
Trigger: GCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGA...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCAACGGCACGAGGCGCTaGAGGTCGTCGGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVNGTRR*RSSGPR
Trigger: CCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTT...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGGTAGAAAGCCCCGATaGACTGCGCCTCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAGRKPR*TAPPSG
Trigger: ACCGCTTGGAGGCGCAGTGCATCGGGGCTTTCTACC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCAGGCGCGCGGCCTaGACACGCGTCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPSRRAA*TRVSNS
Trigger: GGAGTTGGAGACGCGTGTGCAGGCCGCGCGCCTGCT...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGTCAGCCACCAGGATCTaGTCCAGCAGGCGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWSATRI*SSRRAA
Trigger: GGCCGCGCGCCTGCTGGAGCAGATCCTGGTGGCTGA...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGTCGGGCCCGCGGCCCTaGCTTGTGTCGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQSGPRP*LVSLAS
Trigger: GGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGA...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp CGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTaGTCATATCCATGCCCTGGCTCTGGCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RCPVRAVSRLPC*SYPCPGSGPGE
Trigger: CTCACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: MVASWYSWDHLWAQEPMWVRACR*VPGGAA
Trigger: GGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGAC...CCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR GCA 90 bp GTGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTAGCGCGGGTCCAGGCTaGCCAGCCAGTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VSPLGLPPVQGSGECSISSAGPG*PASPPG
Trigger: ACCTGGCGGACTGGCTGGGCAGCCTGGACCCGCGCT...AGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTCGGGAGGAGCGGCCCTaGAGGAAGCGGATGATCTTC +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSREERP*RKRMIF
Trigger: GAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCG...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCCTCAGGCAGGACCTaGGGCTCAGGCCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSSSGRT*GSGHSK
Trigger: CTTCGAGTGGCCTGAGCCCCAGGTCCTGCCTGAGGA...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCGCACTCATCCCTGGCTaGCTCCTGGGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSALIPG*LLGPGP
Trigger: AGGGCCTGGGCCCAGGAGCCAGCCAGGGATGAGTGC...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GCAATTCCACTGCCAGTGGACTGGGTGCCAGGAGGCCTAGGTCTGGATCTGGGGCTTCCTCCTGGGAGCTaGCCTCCTGCTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: AIPLPVDWVPGGLGLDLGLPPGS*PPAHPG
Trigger: GCCGGGATGAGCAGGAGGCCAGCTCCCAGGAGGAAG...CCCCAGATCCAGACCTAGGCCTCCTGGCACCCAGTCCACTGGCAGTGGAATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACACCACGAGCGCCAGCGTaGCCGAGCGCTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETPRAPA*PSAPPR
Trigger: GCGAGGTGGAGCGCTCGGGCACGCTGGCGCTCGTGG...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCGTTCCTCATGTCCAGTaGTGCCCGAAACGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAVPHVQ*CPKRAD
Trigger: ATCAGCCCGTTTCGGGCAGCACTGGACATGAGGAAC...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCACCCAATGGCAGGGCCTaGGGGAGTTCTAACCTCCCG +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPPNGRA*GSSNLP
Trigger: CGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGG...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCGATGGCACTCATCCCTaGCTGGCTCCTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSDGTHP*LAPGPR
Trigger: CCTGGGCCCAGGAGCCAGCCAGGGATGAGTGCCATC...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGGCCGTGGGCCCGACATaGCGAAGAAGCGACACAGCT +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWAVGPT*RRSDTA
Trigger: AGCTGTGTCGCTTCTTCGCCATGTCGGGCCCACGGC...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCTCTGAATACTGCCCTTaGGGACCTCAGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGASEYCP*GPQEGV
Trigger: CACTCCCTCCTGAGGTCCCCAAGGGCAGTATTCAGA...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCTTTCCAAGGGCGAGATaGCGAGCTAGGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGAFPRAR*RARWRK
Trigger: CTTCCTCCACCTAGCTCGCCATCTCGCCCTTGGAAA...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GTGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGGAGTTCCTCCTCCGTaGGCCGCAGAAGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: VSPLGLPPVQGSGECSISGVPPP*AAEAGR
Trigger: GCGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCC...AGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR TCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGGTCCAGGCCGCAGCTaGCCAGGCCGTAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGGPGRS*PGRRCT
Trigger: AGTACACCTACGGCCTGGTCAGCTGCGGCCTGGACC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTTTGCTCTGGCCGCCGTaGGGATGCGGGCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGLPPVQGSGECSISALVLLWPP*GCGRGA
Trigger: TGCACCGCGCCCGCATCCTCACGGCGGCCAGAGCAA...AACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACAGCGCGGGTCCAGGCTaGCCAGCCAGTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHSAGPG*PASPPG
Trigger: ACCTGGCGGACTGGCTGGGCAGCCTGGACCCGCGCT...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGTGCTCAGACACGCGGTaGAGCAGGGAGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CPHWVCHQYRAAGSVAFLCSDTR*SRERSR
Trigger: CCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCA...CAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCAGTCTTCCAGCAGCTaGTGCTCAGACACGCGGTGC +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCQSSSS*CSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTG...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCCGGGAGGAGCGGCCCTaGAGGAAGCGGATGATCTTC +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPREERP*RKRMIF
Trigger: GAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCG...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGCGGACAAGGCCTGCTaGAGCTCCGGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGADKAC*SSGSAR
Trigger: GCGCGCGCTGCCGGAGCTGCAGCAGGCCTTGTCCGC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCTCCAACTCCGGCGCCTaGAGCAGCCGCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTSNSGA*SSRNSR
Trigger: CCTGCTGTTGCGGCTGCTGCAGGCGCCGGAGTTGGA...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTCCTTCCAGCCCAAACTaGACAGCCCCAACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSPSSPN*TAPTRF
Trigger: GAACCTGGTTGGGGCTGTGCAGTTTGGGCTGGAAGG...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCACGATCATGGCTCACTaGAGCCTCATCCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPTIMAH*SLIPRA
Trigger: GGCCCGGGGGATGAGGCTGCAGTGAGCCATGATCGT...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCCCTGGCTTGTGTCGCTaGCGTCCACCAGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVPGLCR*RPPDSG
Trigger: CCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGG...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCTCCTCAGGCAGGACCTaGGGCTCAGGCCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSSSGRT*GSGHSK
Trigger: CTTCGAGTGGCCTGAGCCCCAGGTCCTGCCTGAGGA...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCATCGTGGGACCACCTGTaGGCACAGGAGCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPSWDHL*AQEPMW
Trigger: CCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGA...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCAGAGGGAGGGGACTGGTTAGGTTaGACCCATGGGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GTTCGHRSQCGSDSWAEGGDWLG*THGCST
Trigger: GGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCC...TCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATCTCGGCGCCCGGCCGTaGGCCCGACATGGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHLGARP*ARHGEE
Trigger: TTCTTCGCCATGTCGGGCCCACGGCCGGGCGCCGAG...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGGTCCAGGCCGCAGCTaGCCAGGCCGTAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: PLGLPPVQGSGECSISALGPGRS*PGRRCT
Trigger: AGTACACCTACGGCCTGGTCAGCTGCGGCCTGGACC...CAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR TCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATTTCTCTGGCCGCCGTaGGGATGCGGGCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGEFLWPP*GCGRGA
Trigger: TGCACCGCGCCCGCATCCTCACGGCGGCCAGAGAAA...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCTGTCCCCACTGGGTTTaGCACCAGTACAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPCPHWV*HQYRAA
Trigger: CGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGCTGCACCTCGGTGCCTaGCCCCGGCGACACTTCGCG +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGLHLGA*PRRHFA
Trigger: CGCGAAGTGTCGCCGGGGGCAGGCACCGAGGTGCAG...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCCGCTCCAGGGCGTCCTaGACCTCGGTGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLRSRAS*TSVPAP
Trigger: GGGGGCAGGCACCGAGGTGCAGGACGCCCTGGAGCG...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATCACGCCCAGCCCAATaGGCGCCACGCGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGESRPAQ*APRGLG
Trigger: ACCGAGACCGCGTGGCGCGCATTGGGCTGGGCGTGA...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCTCCAGCTTCTGGGGCTaGTGGCATTCCTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSSSFWG*WHSLAW
Trigger: CCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCTGGA...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCTGGGGAACTGGGGACTaGTTAGGTTGGACCCATGGG +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQAWGTGD*LGWTHG
Trigger: CCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCA...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCAGAGGGACTGAGGAAAGTGGGTTaGAGGTGGGCCATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GTTCGHRSQCGSDSWAEGLRKVG*RWAMRV
Trigger: CACCCTCATGGCCCACCTCCAACCCACTTTCCTCAG...TCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGCCCAATGGCAGGGCCTaGGGGAGTTCTAACCTCCCG +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQPNGRA*GSSNLP
Trigger: CGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGG...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCAGACAGACAACCCAATaGCAGGGCCTGGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCRQTTQ*QGLGEF
Trigger: GAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCT...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGAGGAGACTGGCCAGCTaGGAACCTGAGTTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQRRLAS*EPEFRR
Trigger: CCGCCGGAACTCAGGTTCCCAGCTGGCCAGTCTCCT...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GCAATTCCACTGCCAGTGGACTGGGTGCCAGGAGGCCTAGGTCTGGATCTGGGGGCACCTTCAGGAGACTaGCCAGCTGGGAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: AIPLPVDWVPGGLGLDLGAPSGD*PAGNLS
Trigger: ACTCAGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGC...CCCCAGATCCAGACCTAGGCCTCCTGGCACCCAGTCCACTGGCAGTGGAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCGGCCAAGACAGACTCTaGCAGGGAGGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPGQDRL*QGGEWK
Trigger: CTTCCACTCCCCTCCCTGCCAGAGTCTGTCTTGGCC...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGCAGCACGAGGGCTaGCATCTCTCCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGRQHEG*HLSFQP
Trigger: GGGCTGGAAGGAGAGATGCCAGCCCTCGTGCTGCCT...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GTCAAAACCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGCAGGGAGTGCTGCAGCCACGTCTaGACCTCGGCCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VKTKASRLALAKTDSGRECCSHV*TSASFQ
Trigger: CTGGAAGGAGGCCGAGGTTCAGACGTGGCTGCAGCA...CTCCCTGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATGCTTTGGTTTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGGAGTTCCTCCTCCGTaGGCCGCAGAAGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHGVPPP*AAEAGR
Trigger: GCGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGCAGGGACCCTCCCCATaGCGGAGACAGACAACCCAA +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQQGPSP*RRQTTQ
Trigger: TTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTG...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCAGGAGGGAGTGGGACTaGTTGGAGACAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQARREWD*LETKSQ
Trigger: CTGGCTCTTTGTCTCCAATCAGTCCCACTCCCTCCT...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCTCTTCCAGCAGCTGCTaGTCAGACACGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVSSSSC*SDTRCS
Trigger: GCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGA...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCTGCTTGTCATATCCATaGCCTGGCTCTGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSCLSYP*PGSGPG
Trigger: ACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCA...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGGTGTCCAGGCTGCCCTaGTTGTCATATCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWVSRLP*LSYPCP
Trigger: AGGGCATGGATATGACAAGCAGGGCAGCCTGGACAC...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCAGCAGGAGAAGGGAATaGAGAACCACCCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSSRRRE*RTTPTP
Trigger: TGGGGTGGGGGTGGTTCTGCATTCCCTTCTCCTGCT...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCTTGCTCAGAATACAGTaGCCAGGCCCGCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSLLRIQ*PGPPGH
Trigger: ATGCCCAGGCGGGCCTGGGCACTGTATTCTGAGCAA...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGGCACGGCCTCCCCATaGCCAGACCCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLGTASP*PDPGPN
Trigger: GTTTGGGCCTGGGTCTGGGCATGGGGAGGCCGTGCC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCAAGCAACTGGAGGTCTaGAGCTGGAAGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSKQLEV*SWKPSP
Trigger: TGGGCTGGGCTTCCAGCTGCAGACCTCCAGTTGCTT...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGGGTTGCCCCTCTCCTTaGAGATGGCTGCCTAATCCT +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKEGCPSP*RWLPNP
Trigger: AGGATTAGGCAGCCATCTGCAAGGAGAGGGGCAACC...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGATGCCCAGGTCGGTCTaGAGTTCCTCCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: CPHWVCHQYRAAGSVAFLMPRSV*SSSSVS
Trigger: GCTCACGGAGGAGGAACTCCAGACCGACCTGGGCAT...CAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGGCACAGGAGCCAATGTaGTTCAGACAGCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWAQEPM*FRQLGR
Trigger: TCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGC...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCGTTAGGTTGGACCCATaGGTGCAGCACCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSVRLDP*VQHPPN
Trigger: GTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAAC...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CTCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGCAGGGCTGGGGAACTaGGGACTGGTTAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LNGGLLVFVGPPVGTGANAGLGN*GLVRLD
Trigger: GTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGC...ATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCAAGTCACAGCAGGGCTaGGGAACTGGGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCKSQQG*GTGDWL
Trigger: TAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTT...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGCACTCATCCCTGGCTaGCTCCTGGGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGALIPG*LLGPGP
Trigger: AGGGCCTGGGCCCAGGAGCCAGCCAGGGATGAGTGC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCCTCGCCCTGGATGTaGCAAAAGATACCACACCGA +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCPSPWM*QKIPHR
Trigger: TCGGTGTGGTATCTTTTGCCACATCCAGGGCGAGGG...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTCAAAACCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGCAGGGAGAGGCATGGGGTAGGGTaGGCTTTGAGGCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: VKTKASRLALAKTDSGRERHGVG*ALRHGL
Trigger: GAGGCCGTGCCTCAAAGCCCACCCTACCCCATGCCT...CTCCCTGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATGCTTTGGTTTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp TCATATCCATGCCCTGGCTCTGGCCCCGGTGAGCACTaGTGCTGCATGAGGAAAGGAGGATCAGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SYPCPGSGPGEH*CCMRKGGSGGV
Trigger: GACCCCACCTGATCCTCCTTTCCTCATGCAGCACAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGTGGCGCCGATGTCGCTaGACACCTTGGTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQWRRCR*TPWSCL
Trigger: AAGGCAAGACCAAGGTGTTCAGCGACATCGGCGCCA...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAGAACCTCTTGCGGGTaGTGCCCGATTTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPRTSCG*CPISCP
Trigger: TGGGCATGAAATCGGGCATCACCCGCAAGAGGTTCT...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGCCTGCAGGAAGCGGATaGTCTTCTCAATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: MVASWYSWDHLWAQEPMWPAGSG*SSQWWP
Trigger: AGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGG...CCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR TCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCCCTGCAGGAAGCGGATaGTCTTCTCAATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPPAGSG*SSQWWP
Trigger: AGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGG...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGGGCCAGGCACAGTCTaGGTGGAGAGCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRGPGTV*VESHDG
Trigger: GCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCC...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTTCACTCTGGCCGCCGTaGGGATGCGGGCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRASLWPP*GCGRGA
Trigger: TGCACCGCGCCCGCATCCTCACGGCGGCCAGAGTGA...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578128.5
CDS-3UTR TCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCGGTAATGCAGGGCCCTaGACCCATGCTCATAATGGA +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCGNAGP*THAHNG
Trigger: TCCATTATGAGCATGGGTTCAGGGCCCTGCATTACC...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCCAGGTCTCTAACTCCTaGGCTCAAGGATCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVQVSNS*AQGSAC
Trigger: GCAGGCGGATCCTTGAGCTCAGGAGTTAGAGACCTG...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCCGCCAACACCGCTACTaGGAGGCAGGCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLRQHRY*EAGVQP
Trigger: CGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCG...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAAAAGCCCCGATGCACTaGGCCTCCAAGCGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGKAPMH*ASKRLE
Trigger: CTCTAACCGCTTGGAGGCGCAGTGCATCGGGGCTTT...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTAGCGCGGGTCCAGGCTaGCCAGCCAGTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRASAGPG*PASPPG
Trigger: ACCTGGCGGACTGGCTGGGCAGCCTGGACCCGCGCT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp TGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTGGCACGCCCAGGTGGATaGCGCAGTCTTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WVCHQYRAAGSVAFLLWLARPGG*RSLPAA
Trigger: AGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGC...CAACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGCACGCCCAGGTGGATaGCGCAGTCTTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRARPGG*RSLPAA
Trigger: AGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGC...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTAGTCATGGTCTTGCATaGACTTGTCCAGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSSHGLA*TCPVLQ
Trigger: CTGGAGCACTGGACAAGTGCATGCAAGACCATGACT...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAAAGTAAGCACAGCCTaGATGTCCTCAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPKVSTA*MSSGRT
Trigger: GGTCCTGCCTGAGGACATGCAGGCTGTGCTTACTTT...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCCTGAAGCCATGCAGCTaGAGGTGCACCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPLKPCS*RCTFRR
Trigger: TCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAG...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCGGCCCGCCTGGGCATTaGCTTAATTCCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTGPPGH*LNSCLR
Trigger: CCTCAGACAGGAATTAAGGCAATGCCCAGGCGGGCC...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGAACCTCTCTGAATACTaGCCTTGGGGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWNLSEY*PWGPQE
Trigger: CTCCTGAGGTCCCCAAGGGCAGTATTCAGAGAGGTT...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCCCAGCTGGGGCTGGATaGTGGACTCTGATTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTPAGAG*WTLIPS
Trigger: TGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGG...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCTCTACTGACTCGCTGTaGAACCTTGAGCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQASTDSL*NLEQAP
Trigger: TGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGA...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGCAGGAGCCCTGAGCTaGCTGGTGGATTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGAGALS*LVDWYQ
Trigger: TTGGTACCAATCCACCAGGCAGCTCAGGGCTCCTGC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGCTGGAGGAAGAGTGTTaGCTTTGCTGTGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWLEEEC*LCCGWG
Trigger: TCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAG...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAGCCGCCACCAGCCTCTaGCATGTCTCCTCCGAATGC +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSAATSL*HVSSEC
Trigger: GCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGC...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTGCTGATGAAGACATCTaGAGTGTCCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSADEDI*SVPTGF
Trigger: AAACCCAGTGGGGACACTCCAGATGTCTTCATCAGC...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCTCAATGGTGGCCTCCTaGTATTCGTGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: VASWYSWDHLWAQEPMWFSMVAS*YSWDHL
Trigger: CAGGTGGTCCCACGAATACCAGGAGGCCACCATTGA...GAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GTCAAAACCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGCAGGGAGGGGGACTGGTTAGGTTaGACCCATGGGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VKTKASRLALAKTDSGREGDWLG*THGCST
Trigger: GGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCC...CTCCCTGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATGCTTTGGTTTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGTGGGGAACTGGGGACTaGTTAGGTTGGACCCATGGG +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQWGTGD*LGWTHG
Trigger: CCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCA...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCCTGAGGAAAGTGGGTTaGAGGTGGGCCATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVLRKVG*RWAMRV
Trigger: CACCCTCATGGCCCACCTCCAACCCACTTTCCTCAG...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCACACAGCACCAAGGCATaGGGTAGGGTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSHSTKA*GRVGFE
Trigger: CTCAAAGCCCACCCTACCCCATGCCTTGGTGCTGTG...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGCCATGGGGGCTGCCTaGTCCCTGAGTAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHAMGAA*SLSKQW
Trigger: CCACTGCTTACTCAGGGACCAGGCAGCCCCCATGGC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCTGCCGGTCAGAAGTTTaGGGGAGGAGTGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVCRSEV*GRSVGR
Trigger: CCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCA...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGCCTCCTCCACCAGTTaGAAGACCTCGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGASSTS*KTSARP
Trigger: CGGCCTGGCCGAGGTCTTCCAACTGGTGGAGGAGGC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTGCCTTTGCTGTGGTTaGGGAATCGATCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSCLCCG*GIDPWL
Trigger: TAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCA...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAVRACR*VPGGAA
Trigger: GGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGAC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAACAGGGACCCTCCCCATaGCGGAGACAGACAACCCAA +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGEQGPSP*RRQTTQ
Trigger: TTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTG...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCTCATCCTCCTCAAGCTaGCTGCTATCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCSSSSS*LLSAGE
Trigger: TTCTCCTGCTGATAGCAGTCAGCTTGAGGAGGATGA...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCGCTAAGGGCACTGAGTaGTTACAGGGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGAKGTE*LQGKAT
Trigger: TGTGGCCTTGCCCTGTAATCACTCAGTGCCCTTAGC...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCTGCTTTCTTACCCTCTaGACCCAGTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVCFLTL*TQWRRG
Trigger: CCCCCTCCTCCACTGGGTTCAGAGGGTAAGAAAGCA...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATAGCGGTTGGCAAAGGTaGTGCAGGCCCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHSGWQR*CRPRCR
Trigger: CCTGCATCTGGGCCTGCATCACCTTTGCCAACCGCT...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCTTAGAGGAGGCTTGTaGCTTCAGCTGTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSLRGGL*LQLFQL
Trigger: CAGCTGGAACAGCTGAAGTCACAAGCCTCCTCTAAG...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCAGGAAAGGCCACTTCTaGGTCCTCTGTCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSRKGHF*VLCLRR
Trigger: TCTCCTGAGACAGAGGACTCAGAAGTGGCCTTTCCT...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAAACATGTGCTCCAAGATaGCTGCCACGCTCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGETCAPR*LPRSAP
Trigger: TGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGT...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGCAGCGCGGGGTCCGTaGGGCGGCACCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHAARGP*GGTNTA
Trigger: TGCTGTATTGGTGCCGCCGCACGGACCCCGCGCTGC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGACGCGCTTCTCTACCATaGGTCGCTGCACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGRASLP*VAAPPG
Trigger: GCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCG...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACAGAAGAGCCACTCGGCTaGGCGCTTCTCTACCATGCG +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETEEPLG*ALLYHA
Trigger: CGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTC...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCTGCTCAGACACGCGGTaGAGCAGGGAGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLCSDTR*SRERSR
Trigger: CCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCA...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCAGAGGGAGTTTGTCCTCGAACTTaGCTGCTTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTTCGHRSQCGSDSWAEGVCPRT*LLPASP
Trigger: TGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAAC...TCCCTCTGCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR GCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGGTTTGTCCTCGAACTTaGCTGCTTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKEVCPRT*LLPASP
Trigger: TGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAAC...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCAGTCATGGTCTTGCATaGACTTGTCCAGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQASHGLA*TCPVLQ
Trigger: CTGGAGCACTGGACAAGTGCATGCAAGACCATGACT...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTATGCACCCAATCCTTaGAGTCATGGTCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSYAPNP*SHGLAC
Trigger: GCATGCAAGACCATGACTGCAAGGATTGGGTGCATA...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GTCAAAACCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGCAGGGAGAGCAGGAGAAGGGAATaGAGAACCACCCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: VKTKASRLALAKTDSGRESRRRE*RTTPTP
Trigger: TGGGGTGGGGGTGGTTCTGCATTCCCTTCTCCTGCT...CTCCCTGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATGCTTTGGTTTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCCCTCCTCAAGCTGACTaGTATCAGCAGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPPPQAD*YQQEKG
Trigger: TCCCTTCTCCTGCTGATAGCAGTCAGCTTGAGGAGG...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCAGGAAGTTGTAAGTaGAGGGGCCAGGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSAGSCK*RGQAQS
Trigger: AGACTGTGCCTGGCCCCTGCACTTACAACTTCCTGC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCAGGTTCTGTCTAGGCTaGTTTTACTGCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSRFCLG*FYCHGG
Trigger: GCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCT...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGGGAAAGCAATTCCACTaGCAGTGGACTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQGKQFH*QWTGCQ
Trigger: CTGGCACCCAGTCCACTGGCAGTGGAATTGCTTTCC...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGGGTGAGCACTTGTGCTaGATGAGGAAAGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKEGEHLC*MRKGGS
Trigger: TGATCCTCCTTTCCTCATGCAGCACAAGTGCTCACC...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGACCCACCATGGGCCCGTaGCACCGCCCCCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGPTMGP*HRPHLA
Trigger: GGCCAGATGGGGGCGGTGGCACGGGCCCATGGTGGG...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCATGGTCTCTCACAGGATaGTGGAAAAGGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPWSLTG*WKRLIL
Trigger: GAGGATCAGCCTTTTCCAGCATCCTGTGAGAGACCA...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCCTCCTTGCAGATGGCTaGCTAATCCTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVLLADG*LILQEP
Trigger: TGGCTCCTGGAGGATTAGGCAGCCATCTGCAAGGAG...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAGCAGCTCGTCCTCCTTaGAGAAGGCGAGCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSAARPP*RRRAGR
Trigger: TCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGC...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGGGCAGGATGGGCCGTaGCACCTCCTCGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSGQDGP*HLLAQQ
Trigger: CTGCTGGGCGAGGAGGTGCCACGGCCCATCCTGCCC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCATGTGGTTCAGACAGCTaGGCAGAGGGAGCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSCGSDS*AEGAAS
Trigger: ACTAGCAGCTCCCTCTGCCCAGCTGTCTGAACCACA...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGGTTAGGTTGGACCCATaGGTGCAGCACCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQVRLDP*VQHPPN
Trigger: GTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAAC...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCCAGGCACAGTCTGAGTaGAGAGCCATGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGQAQSE*RAMMAL
Trigger: GAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTG...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCTGGAGGAGGGGGCAATaGGATATTCCTGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCWRRGQ*DIPALY
Trigger: ATACAGAGCAGGAATATCCCATTGCCCCCTCCTCCA...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGAGGAGGCGGCGGCTaGAACAAAGCGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGRGGGG*NKAWPG
Trigger: CCCAGGCCACGCTTTGTTCCAGCCGCCGCCTCCTCT...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGAGAGACCCGGGTTTTaGGAAAAGAGGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSERPGF*EKRDPR
Trigger: TCTCGGGTCCCTCTTTTCCCAAAACCCGGGTCTCTC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGGGCCACACAGGGCAGTaGACAACAGTGGAGGGTATA +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQGHTGQ*TTVEGI
Trigger: TATACCCTCCACTGTTGTCCACTGCCCTGTGTGGCC...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATAGTAGGGGGAGGATCTaGCTGACTCAGCCCCAACCG +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHSRGRI*LTQPQP
Trigger: CGGTTGGGGCTGAGTCAGCCAGATCCTCCCCCTACT...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAAGCTGCCTGGTGGATTaGTACCAAGTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRSCLVD*YQVGPA
Trigger: GGCTGGCCCCACTTGGTACCAATCCACCAGGCAGCT...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGGTGTTGCCTTTGCTGTaGTTGGGGAATCGATCCTTG +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKEVLPLL*LGNRSL
Trigger: CAAGGATCGATTCCCCAACCACAGCAAAGGCAACAC...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGTCTCTCACAGGATGCTaGAAAAGGCTGATCCTCACC +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWSLTGC*KRLILT
Trigger: GGTGAGGATCAGCCTTTTCCAGCATCCTGTGAGAGA...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTGCTAACATTGCTGCTTaGCAAGGCTGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSANIAA*QGCVLS
Trigger: AGAGAGAACACAGCCTTGCCAAGCAGCAATGTTAGC...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGTACCACCGGGCTGAATaGAAGCAGTCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQYHRAE*KQSAGS
Trigger: ACTGCCTGCTGACTGCTTCCATTCAGCCCGGTGGTA...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAGGCCAGCTGGGAACCTaGGTTCCGGCGGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGGQLGT*VPAVAD
Trigger: ATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCC...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR TCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGACTCGAAGCCATCAATaGTGGGCACAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWTRSHQ*WAQCSC
Trigger: GCAAGAACATTGTGCCCATCATTGATGGCTTCGAGT...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TGGTTAGGTTGGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTGCTCCCTCTCCAGATACTaGGGAAAGTGGGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: WLGWTHGCSTLQTGVRACSLSRY*GKWVGG
Trigger: ACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGA...GCAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR TCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCTCCCTCTCCAGATACTaGGGAAAGTGGGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGSLSRY*GKWVGG
Trigger: ACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGA...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCAGCCCAGCCTCAGAATaGTTCTCAGGAAAGCAATTC +
Preference number: 4 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSSPASE*FSGKQF
Trigger: GAATTGCTTTCCTGAGAATCATTCTGAGGCTGGGCT...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGCTTGACCTGGTGATCTaGGCTGTGTTTGTCCTAGTA +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKELDLVI*AVFVLV
Trigger: TACTAGGACAAACACAGCTCAGATCACCAGGTCAAG...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAAGGTGCTTGACCTGGTaGTCTGAGCTGTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSRCLTW*SELCLS
Trigger: GGACAAACACAGCTCAGATCACCAGGTCAAGCACCT...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAACTCGCTGTGCAACCTTaGGCAAGCCCCACTAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGELAVQP*ASPTRN
Trigger: GTTCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAG...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCGTAAGAGGGGCTTGGTaGTCTCTGGAGGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGVRGAW*SLEEEC
Trigger: ACACTCTTCCTCCAGAGATCACCAAGCCCCTCTTAC...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGGCCACAGGCTAGCTTaGCCCGCTGACTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHGHRLA*PADFFL
Trigger: CAGGAAAAAGTCAGCGGGTCAAGCTAGCCTGTGGCC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCGTCTCCATTCCTCCTTaGCTACTGTCTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVVSIPP*LLSSHP
Trigger: AGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGAC...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTACTGCGAGGCAGGCGTaGAGCCGAAGCAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRATARQA*SRSSSS
Trigger: GGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCACCTTGGTCTTGCCTTaGAGGCTCTTGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVTLVLP*RLLMAA
Trigger: GGCTGCCATCAAGAGCCTGCAAGGCAAGACCAAGGT...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGTCTTCCAGCAGCTGCTaGTCAGACACGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGSSSSC*SDTRCS
Trigger: GCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGA...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCTATGCACCCAATCCTTaGAGTCATGGTCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQAYAPNP*SHGLAC
Trigger: GCATGCAAGACCATGACTGCAAGGATTGGGTGCATA...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCGGGCAGTGTCCAGGCTaGCCTGCTTGTCATATCCAT +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVGQCPG*PACHIH
Trigger: ATGGATATGACAAGCAGGGCAGCCTGGACACTGCCC...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CTCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATAGTTCTAACCTCCCGTaGCCAAGCCTGACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LNGGLLVFVGPPVGTGANSSNLP*PSLTSL
Trigger: AAGGGAAGTCAGGCTTGGGCACGGGAGGTTAGAACT...ATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR GCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGAGGGAGGGCTGGTTTaGCTCAACCCTCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLEGGLV*LNPRPG
Trigger: TCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAACTAGGCTGCTTTTACTaGCATGGGGGCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGELGCFY*HGGCLV
Trigger: GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAG...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCCATTCTACAATGAGATaGCTCTCTTCATGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQAHSTMR*LSSWAW
Trigger: CCAGGCCCATGAAGAGAGGCATCTCATTGTAGAATG...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCCCAGGCATGGTGGTATaGACTGGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVPGMVV*TGSPSY
Trigger: GTAGCTGGGACTACCAGTGCATACCACCATGCCTGG...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAACCTCATGTCCAGTGCTaGCCGAAACGGGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: RREPFPPADGPGGCRDDKPHVQC*PKRADG
Trigger: CCCATCAGCCCGTTTCGGGCAGCACTGGACATGAGG...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGGGTCCTCACCATTTTaGCCAGTCCAGGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSGSSPF*PVQVSN
Trigger: GTTAGAGACCTGGACTGGGCAAAATGGTGAGGACCC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGCAATCCTTGCAGTCATaGTCTTGCATGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWQSLQS*SCMHLS
Trigger: GGACAAGTGCATGCAAGACCATGACTGCAAGGATTG...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGATCAATGGTGGCCTCCTaGTATTCGTGGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGSMVAS*YSWDHL
Trigger: CAAGTGGTCCCACGAATACCAGGAGGCCACCATTGA...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGGGGACTGGTTAGGTTaGACCCATGGGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGGDWLG*THGCST
Trigger: GGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTCTTCAGAAAGGACGATaGAAATGGAAGTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSLQKGR*KWKSQQ
Trigger: CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAG...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGTCAGCCCAGGGAGACTaGTTTCAGGAGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQSAQGD*FQELFL
Trigger: AAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCTGA...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGAGGAGACTGGCCAGCTaGGAACCTGAGTTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HQYRAAGSVAFLLWLKHKRRLAS*EPEFRR
Trigger: CCGCCGGAACTCAGGTTCCCAGCTGGCCAGTCTCCT...CTTATGCTTCAACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGCTGGGGAAGCCAGCTaGGCCAGACCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHAGEAS*ARPGRS
Trigger: GCTCCTTCCTGGTCTGGCCCAGCTGGCTTCCCCAGC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCACATCGAGGCTGGCACTaGCCAAGACAGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSHRGWH*PRQTLA
Trigger: TGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATG...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGACACTGTATTGTTATTaGCGCTGTCCTGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWTLYCY*RCPVRA
Trigger: TGCCCTCACAGGACAGCGCCAATAACAATACAGTGT...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAGCTGGGGCTGGATGCTaGACTCTGATTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSAGAGC*TLIPSE
Trigger: CTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGC...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACGCAGTTCTTGGCCCTTaGGGAGAAGTAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHAVLGP*GEVGGG
Trigger: TCCTCCCCCTACTTCTCCCCAAGGGCCAAGAACTGC...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGGGGGCGCAGCCAGCTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGAATGAATGTGGTACCTaGTTAGTGCCAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGAQPALRCQHLALAGKENECGT*LVPALG
Trigger: TCCCAAGGCTGGCACTAACCAGGTACCACATTCATT...CTCTTTCCCCGCAAGGGCCAGGTGTTGACACCTTAAAGCTGGCTGCGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCGGCAGAGGAGCTATTTaGGACAGGAGTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVGRGAI*DRSQFS
Trigger: GGAGAACTGACTCCTGTCCCAAATAGCTCCTCTGCC...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCCTCAGCTTCTCAGCTTaGGGAAGGAGGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLLLALSCEGSVQAALLVLSFSA*GRRRFR
Trigger: CCTGAACCTCCTCCTTCCCCAAGCTGAGAAGCTGAG...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCATCACCCAGGCATGGTaGTATGCACTGGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGITQAW*YALVVP
Trigger: TGGGACTACCAGTGCATACCACCATGCCTGGGTGAT...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGAACCCACCTGTGTCTaGTTCCTCATGTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGEPTCV*FLMSSA
Trigger: AGCACTGGACATGAGGAACCAGACACAGGTGGGTTC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCCTACTAAGTGCCAAGTaGGTGGGTGATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTLLSAK*VGDACC
Trigger: ACAGCAGGCATCACCCACCCACTTGGCACTTAGTAG...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGAGCTTCTGGGGCTGCTaGCATTCCTTGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLSFWGC*HSLAWG
Trigger: GCCCCAAGCCAAGGAATGCCAGCAGCCCCAGAAGCT...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGGTCCAGGCCGCAGCTaGCCAGGCCGTAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSGPGRS*PGRRCT
Trigger: AGTACACCTACGGCCTGGTCAGCTGCGGCCTGGACC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGCCAGGCACAGTCTaGGTGGAGAGCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAGPGTV*VESHDG
Trigger: GCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTTGGCTCTGGCCCCGGTaGGCACTTGTGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAWLWPR*ALVLHE
Trigger: CTCATGCAGCACAAGTGCTCACCGGGGCCAGAGCCA...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAGGCCTGGGGAAAGGATaGATGAGTGTGGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSGLGKG*MSVAGL
Trigger: AAGTCCAGCCACACTCATTCATCCTTTCCCCAGGCC...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGGGTACAGTGAGCTATaGTTATGTCACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGGYSEL*LCHCPP
Trigger: TGGAGGGCAGTGACATAATCATAGCTCACTGTACCC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAATAGCCTGGCCATGCTaGCGGCCTCCGGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGIAWPC*RPPASS
Trigger: TGAAGATGCCGGAGGCCGTCAGCATGGCCAGGCTAT...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTAGGTCGCCATCCACCTaGTGCTCCCGGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRARSPST*CSRKLS
Trigger: CGAGAGCTTCCGGGAGCAGCAGGTGGATGGCGACCT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCTGCTCAGACACGCGGTaGAGCAGGGAGCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSCSDTR*SRERSR
Trigger: CCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCA...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCTGGGCACAATGTTCTTaGCGCAGCTTAAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSWAQCS*RSLKQS
Trigger: TGACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCA...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTCTGAAGCCATGCAGCTaGAGGTGCACCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGLPPVQGSGECSISALVLKPCS*RCTFRR
Trigger: TCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAG...AACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACACTGAAGCCATGCAGCTaGAGGTGCACCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETLKPCS*RCTFRR
Trigger: TCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAG...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGGAATCTGTAAGAAATaGAGAGTCCTAGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSGICKK*RVLGPT
Trigger: GGTGGGGCCTAGGACTCTGCATTTCTTACAGATTCC...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGTTAGACAACAGAAGCTaGTGGGCTGGGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGLDNRS*WAGQEP
Trigger: GGGCTCCTGCCCAGCCCAGCAGCTTCTGTTGTCTAA...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCATGGGTGGGTGATGCCTaGTGTGACCACAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSWVGDA*CDHKRF
Trigger: GAACCTCTTGTGGTCACAGCAGGCATCACCCACCCA...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSRCTPR*MPQSSS
Trigger: GCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCG...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGRCTPR*MPQSSS
Trigger: GCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCG...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAGCAGGGCTGGGGAACTaGGGACTGGTTAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGAGLGN*GLVRLD
Trigger: GTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGC...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGAGGAGACTGGCCAGCTaGGAACCTGAGTTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRRRLAS*EPEFRR
Trigger: CCGCCGGAACTCAGGTTCCCAGCTGGCCAGTCTCCT...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCGAAAGGAGGATCAGGTaGGGTCAAAACCAAAGCATC +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSERRIR*GQNQSI
Trigger: GATGCTTTGGTTTTGACCCCACCTGATCCTCCTTTC...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACCGCCATCGAGGCGGATaGCGTCGCACAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYRHRGG*RRTDPG
Trigger: CCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCG...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGATGTTCCAGCTGGGGCTaGATGCTGGACTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRCSSWG*MLDSDS
Trigger: GGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACA...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACACCACTGCAGGACAGGTaGCAGAGGAGCTATTTGGGA +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETPLQDR*QRSYLG
Trigger: TCCCAAATAGCTCCTCTGCCACCTGTCCTGCAGTGG...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCCCTCCCAACCAGAAATaGCAGCTTCATTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPPPNQK*QLHSWN
Trigger: ATTCCAGGAATGAAGCTGCCATTTCTGGTTGGGAGG...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAAGCCCACTGTGGGTTCTaGTGTCCCCAGAATCCATGT +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGEAHCGF*CPQNPC
Trigger: ACATGGATTCTGGGGACACCAGAACCCACAGTGGGC...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTCAAAACCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGCAGGGAGAGTTCCCTGTTTCTCTaGGGTCAGCGTGTACAAGCC +
Preference number: 4 (lower is better)
Translates to: VKTKASRLALAKTDSGRESSLFL*GQRVQA
Trigger: GGCTTGTACACGCTGACCCCAGAGAAACAGGGAACT...CTCCCTGCCAGAGTCTGTCTTGGCCAGTGCCAGCCTCGATGCTTTGGTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCAGGATCATGCCACCTTaGATTTTCAAACCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCRIMPP*IFKPQS
Trigger: ACTCTGCGGTTTGAAAATCCAAGGTGGCATGATCCT...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAAGTAGCTGGGACCACTaGTGCACATTACCACACCTT +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGSSWDH*CTLPHL
Trigger: AAGGTGTGGTAATGTGCACCAGTGGTCCCAGCTACT...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGACAGGCTAGAGTGCAGTaGCACGATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRQARVQ*HDHGSL
Trigger: CAGTGAGCCATGATCGTGCCACTGCACTCTAGCCTG...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp AGAGTGTTGCCTTTGCTGTGGTTGGGGAATCGATCCTaGGCTATGGCCTACCCACTCCCCTGGCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RVLPLLWLGNRS*AMAYPLPWLKS
Trigger: ACTCTTCAGCCAGGGGAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp AGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTaGCTGTGGTTGGGGAATCGATCCTTGGCTATGGCC +
Preference number: 4 (lower is better)
Translates to: RGLVISGGRVLP*LWLGNRSLAMA
Trigger: GGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp ACAGGCCCACTGCAGGACAGGTGGCAGAGGAGCTATTaGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: TGPLQDRWQRSY*GQESVLPFCYP
Trigger: TGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATAGCTCCTCTGCCACCTGTCCTGCAGTGGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp TGGCCAAGCCCAGACAAGGGCAGTCTCCATTCCTCCTaGACTACTGTCTTCCCACCCTCACCATCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WPSPDKGSLHSS*TTVFPPSPSRK
Trigger: CTTCCTTGATGGTGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCTTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCCAGCTGGGAACCTaGGTTCCGGCGGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQGQLGT*VPAVAD
Trigger: ATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR TCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAACTCGAAGCCATCAATaGTGGGCACAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGTRSHQ*WAQCSC
Trigger: GCAAGAACATTGTGCCCATCATTGATGGCTTCGAGT...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGCCTGCAGGAAGCGGATaGTCTTCTCAATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGPAGSG*SSQWWP
Trigger: AGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGG...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAAGCCTTAATTCCTGTCTaGGGCTGCCTTCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: RREPFPPADGPGGCRDDKALIPV*GCLPSS
Trigger: GGATGACGGAAGGCAGCCTCAGACAGGAATTAAGGC...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGGTGGCAGTCACCTCTaGACACACTGGCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMGGSHL*THWPWL
Trigger: AAGCCAAGGCCAGTGTGTTCAGAGGTGACTGCCACC...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACAGCAAGAGGAGCAAAGTaGACACCAAGCAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETARGAK*TPSNWR
Trigger: CCTCCAGTTGCTTGGTGTTCACTTTGCTCCTCTTGC...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCATCCCCCGGGCCCAGATaGTCCTCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPSPGPR*SSHLGL
Trigger: GAGGCCAAGGTGGGAGGATCATCTGGGCCCGGGGGA...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTGTGCTCCAAGATGCCTaGCACGCTCCGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGVLQDA*HAPRQL
Trigger: GAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCAC...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGCACGCCCAGGTGGATaGCGCAGTCTTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSARPGG*RSLPAA
Trigger: AGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGATTGCAGTCATGGTCTTaGATGCACTTGTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PARASTDSLCNLEQAPLGLQSWS*MHLSSA
Trigger: AGCACTGGACAAGTGCATGCAAGACCATGACTGCAA...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCTGGGCACAATGTTCTTaGCGCAGCTTAAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGWAQCS*RSLKQS
Trigger: TGACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCA...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCGGGAGGAGCGGCCCTaGAGGAAGCGGATGATCTTC +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSREERP*RKRMIF
Trigger: GAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCG...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACCCTCCTCAAGCTGACTaGTATCAGCAGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHPPQAD*YQQEKG
Trigger: TCCCTTCTCCTGCTGATAGCAGTCAGCTTGAGGAGG...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCACGTCCTGCACCTCGGTaGCTGCCCCCGGCGACACTT +
Preference number: 4 (lower is better)
Translates to: YLGQESVLPFCYPSLITPRPAPR*LPPATL
Trigger: AAGTGTCGCCGGGGGCAGGCACCGAGGTGCAGGACG...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACAAACAAACCTTCTGGTaGCTTGGGCTTTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHKQTFW*LGLWGP
Trigger: AGGGCCCCAAAGCCCAAGGCACCAGAAGGTTTGTTT...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCATTACCCAGGCTAGAGTaGAGTGGCACGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSLPRLE*SGTIMA
Trigger: AGCCATGATCGTGCCACTGCACTCTAGCCTGGGTAA...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACAGGCGTTTCAGGCTCTaGATGGCGCCGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHRRFRL*MAPMSL
Trigger: CAGCGACATCGGCGCCATCCAGAGCCTGAAACGCCT...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTATGCCCAGGTCGGTCTaGAGTTCCTCCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAMPRSV*SSSSVS
Trigger: GCTCACGGAGGAGGAACTCCAGACCGACCTGGGCAT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGRCTPR*MPQSSS
Trigger: GCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCG...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGTCCTCAGGCAGGACCTaGGGCTCAGGCCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQSSGRT*GSGHSK
Trigger: CTTCGAGTGGCCTGAGCCCCAGGTCCTGCCTGAGGA...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGAGACAGACAACCCAATaGCAGGGCCTGGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMRQTTQ*QGLGEF
Trigger: GAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCT...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAAGTTGCTCTGATGACTaGAGACCATGGAGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSSCSDD*RPWSGV
Trigger: CACTCCGCTCCATGGTCTCCAGTCATCAGAGCAACT...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGCCACGGCCTGGAGCCTaGGTTTATTGGAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMPRPGA*VYWRVL
Trigger: AAGCACCCTCCAATAAACCCAGGCTCCAGGCCGTGG...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATATACAGAGCCCACTGTaGGTTCTGGTGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHIQSPL*VLVSPE
Trigger: TTCTGGGGACACCAGAACCCACAGTGGGCTCTGTAT...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTTTTCTCCACAGGATATaGGTTGCTTTTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: GTLPMTETDNPMAGPGGVFLHRI*VAFPVI
Trigger: AATGACAGGAAAAGCAACCCATATCCTGTGGAGAAA...AACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATGAGGTCTCAACAGAGTaGGATTTGAGGGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHEVSTE*DLRGLT
Trigger: TGTCAGGCCCCTCAAATCCCACTCTGTTGAGACCTC...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp GTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTaGGGGAATCGATCCTTGGCTATGGCCTACCCACTC +
Preference number: 4 (lower is better)
Translates to: VISGGRVLPLLW*GNRSLAMAYPL
Trigger: GAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp GATGGCGAGCTAGGTGGAGGAAGGATCAGGCTAACATaGCTGCTTGGCAAGGCTGTGTTCTCTCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: DGELGGGRIRLT*LLGKAVFSLPV
Trigger: AACTGGGAGAGAGAACACAGCCTTGCCAAGCAGCAATGTTAGCCTGATCCTTCCTCCACCTAGCTCGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGGGCCAGCTGGGAACCTaGGTTCCGGCGGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GSVAFLLWLKHKNAAKAQGQLGT*VPAVAD
Trigger: ATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCC...CTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAGCAGAAATGCTACACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTCTGAGTGGAGAGCCATaGTGGCACTCATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRALSGEP*WHSSLA
Trigger: AGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAG...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTCGCAGGAAACCTCTCTaGATACTGCCCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRARRKPL*ILPLGT
Trigger: GGTCCCCAAGGGCAGTATTCAGAGAGGTTTCCTGCG...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCATTGTTGAATCGTGGTaGTCACATTTGGATGGACAA +
Preference number: 4 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQAIVESW*SHLDGQ
Trigger: TTGTCCATCCAAATGTGATCACCACGATTCAACAAT...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCAATGCCCCAAATTGTTaGATCGTGGTGATCACATTT +
Preference number: 4 (lower is better)
Translates to: DGDRQPNGRAWGSSNLPCNAPNC*IVVITF
Trigger: AAATGTGATCACCACGATTCAACAATTTGGGGCATT...GCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAAACCCACTCCCCTGGCTaGAGAGTGCCAATCATTACA +
Preference number: 4 (lower is better)
Translates to: RREPFPPADGPGGCRDDKTHSPG*RVPIIT
Trigger: TGTAATGATTGGCACTCTTCAGCCAGGGGAGTGGGT...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCAGTCTTCCAGCAGCTaGTGCTCAGACACGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSQSSSS*CSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTG...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGTGTCCCCACTGGGTTTaGCACCAGTACAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQCPHWV*HQYRAA
Trigger: CGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR GCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGTGTCCCCACTGGGTTTaGCACCAGTACAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGCPHWV*HQYRAA
Trigger: CGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp CTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTTTGCAGTCATGGTCTTaGATGCACTTGTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVFVGPPVGTGANVVQTALQSWS*MHLSSA
Trigger: AGCACTGGACAAGTGCATGCAAGACCATGACTGCAA...AGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGCTGAAGCCATGCAGCTaGAGGTGCACCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMLKPCS*RCTFRR
Trigger: TCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAG...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGTTGGACCCATGGGTaGAGCACCCTCCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAGWTHG*STLQTG
Trigger: ACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGACCCGGTGAGCACTTGTaGTGCATGAGGAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGPGEHL*CMRKGG
Trigger: TCCTCCTTTCCTCATGCAGCACAAGTGCTCACCGGG...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATGCTCCCAGTCTGCCTaGCATACGTTAGACAACAGA +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGECSQSA*HTLDNR
Trigger: TCTGTTGTCTAACGTATGGCAGGCAGACTGGGAGCA...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAATGGGCAGAGGATCATaGCACCTTGGATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSMGRGS*HLGFSN
Trigger: GTTTGAAAATCCAAGGTGGCATGATCCTCTGCCCAT...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCCATGCTTGTTTTCTGTaGCCTGCCATATCCCTACTA +
Preference number: 4 (lower is better)
Translates to: QREGWFASTLALDVAKDTHACFL*PAISLL
Trigger: TAGTAGGGATATGGCAGGGCACAGAAAACAAGCATG...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAAAGCTCTCGCAGTACTTaGAGAAACCGATCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGESSRST*RNRSAA
Trigger: TGCAGCAGATCGGTTTCTCCAAGTACTGCGAGAGCT...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCCTGGTCCCAGGGCCCTaGGGCTCACTTGATACCGTT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSLVPGP*GSLDTV
Trigger: AACGGTATCAAGTGAGCCCCAGGGCCCTGGGACCAG...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTGCCTCCTGGTATTCGTaGGACCACCTGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSASWYS*DHLWAQ
Trigger: CTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGC...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGCAGGGCTGGGGAACTaGGGACTGGTTAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQAGLGN*GLVRLD
Trigger: GTCCAACCTAACCAGTCCCCAGTTCCCCAGCCCTGC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAAGTCACAGCAGGGCTaGGGAACTGGGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGKSQQG*GTGDWL
Trigger: TAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTT...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAGATGGCACTCATCCCTaGCTGGCTCCTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPDGTHP*LAPGPR
Trigger: CCTGGGCCCAGGAGCCAGCCAGGGATGAGTGCCATC...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCCCAAGCAGAACACCCTaGCCCTACAGACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLPSRTP*PYRPVS
Trigger: AGACACAGGTCTGTAGGGCCAGGGTGTTCTGCTTGG...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCTCCCTGAGCAGTTCTTaGCCCTTGGGGAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLSLSSS*PLGRSR
Trigger: CCTACTTCTCCCCAAGGGCCAAGAACTGCTCAGGGA...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp AGGACAAGCAACTCTTGTCTAAGGGCAGTGCTCTCTTaGGACGAGGTAGTCAAGAGAGACCAAGGCACCACC +
Preference number: 4 (lower is better)
Translates to: RTSNSCLRAVLS*DEVVKRDQGTT
Trigger: GGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACTGCCCTTAGACAAGAGTTGCTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGCTGAGTGGAGAGCCATaGTGGCACTCATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQLSGEP*WHSSLA
Trigger: AGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAG...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGATCAGCTTCAGCAAACTaGAACAAACCTTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRSASAN*NKPSGA
Trigger: GGCACCAGAAGGTTTGTTTCAGTTTGCTGAAGCTGA...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACCCGGTCACACAGCTGTaGGGTGGTGGTGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYPVTQL*GGGARV
Trigger: AACTCTGGCACCACCACCTCACAGCTGTGTGACCGG...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACACCATCTGTCCTGGAATaGGGATCTGATGATGACAGA +
Preference number: 4 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETPSVLE*GSDDDR
Trigger: TCTGTCATCATCAGATCCTCATTCCAGGACAGATGG...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGAGTTTGCAGTTTTGCTaGGGAGTCAGCAGTCGCACA +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLSLQFC*GVSSRT
Trigger: TGTGCGACTGCTGACTCCTCAGCAAAACTGCAAACT...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATCATGTCTCCTCCGAATaGTTGAACATGTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHHVSSE*LNMCSK
Trigger: CTTGGAGCACATGTTCAAGCATTCGGAGGAGACATG...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCTTCCAGCAGCTGCTaGTCAGACACGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSVAFLLWLKHKNAAKAQSSSSC*SDTRCS
Trigger: GCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGA...CTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAGCAGAAATGCTACACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp GGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGCAGTCTTCCAGCAGCTaGTGCTCAGACACGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSVAFLLWLKHKNAAKAQQSSSS*CSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTG...CTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAGCAGAAATGCTACACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGTTTGTCCTCGAACTTaGCTGCTTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGVCPRT*LLPASP
Trigger: TGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAAC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTGGTTGGACCCATGGGTaGAGCACCCTCCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSGWTHG*STLQTG
Trigger: ACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACC...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTGGCCCGCCTGGGCATTaGCTTAATTCCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSGPPGH*LNSCLR
Trigger: CCTCAGACAGGAATTAAGGCAATGCCCAGGCGGGCC...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCTTGCTCAGAATACAGTaGCCAGGCCCGCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSLLRIQ*PGPPGH
Trigger: ATGCCCAGGCGGGCCTGGGCACTGTATTCTGAGCAA...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGCAATGGGATATTCCTaGTCTGTATGGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLAMGYS*SVWPLG
Trigger: ACCCAGAGGCCATACAGAGCAGGAATATCCCATTGC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGAGGTACCAGGCAAGGGTaGCGGTCAGAAGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGGTRQG*RSEVWG
Trigger: CCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACC...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCCCAGAGCCCCTGATCTaGCTGGACCAGAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSPEPLI*LDQKTE
Trigger: CTCTGTCTTCTGGTCCAGGCAGATCAGGGGCTCTGG...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGGCTAGGGTCCCTGGATaGCTCATCGTATACCTTCTT +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLARVPG*LIVYLL
Trigger: AAGAAGGTATACGATGAGGCATCCAGGGACCCTAGC...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTTGGGGAACTGGGGACTaGTTAGGTTGGACCCATGGG +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSWGTGD*LGWTHG
Trigger: CCCATGGGTCCAACCTAACCAGTCCCCAGTTCCCCA...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTAAGTCACAGCAGGGCTaGGGAACTGGGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAKSQQG*GTGDWL
Trigger: TAACCAGTCCCCAGTTCCCCAGCCCTGCTGTGACTT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGCACCTTCAGGAGACTaGCCAGCTGGGAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSAPSGD*PAGNLS
Trigger: ACTCAGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGGCACCTTCAGGAGACTaGCCAGCTGGGAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGAPSGD*PAGNLS
Trigger: ACTCAGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGC...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACAAGGAGCCCCAAACCTaGAGTGAGACCTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHKEPQT*SETFDF
Trigger: AAAGTCAAAGGTCTCACTCCAGGTTTGGGGCTCCTT...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGTTCAGCTGTTCCAGCTaGGGCTGGATGCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVFSCSS*GWMLDS
Trigger: AGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCCTACCCACTCCCCTaGCTGAAGAGTGCCAATCAT +
Preference number: 4 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRAYPLP*LKSANH
Trigger: ATGATTGGCACTCTTCAGCCAGGGGAGTGGGTAGGC...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTTGGGGAATCGATCCTTaGCTATGGCCTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAWGIDP*LWPTHS
Trigger: GGAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCA...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACGCCCCACGTGGGGTATaGATAGGAGCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYAPRGV*IGALLP
Trigger: AGGCAGCAGAGCTCCTATCCATACCCCACGTGGGGC...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGAGAACCTCTTGCGGGTaGTGCCCGATTTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGRTSCG*CPISCP
Trigger: TGGGCATGAAATCGGGCATCACCCGCAAGAGGTTCT...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR TCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGCCTTAATTCCTGTCTaGGGCTGCCTTCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSALIPV*GCLPSS
Trigger: GGATGACGGAAGGCAGCCTCAGACAGGAATTAAGGC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGATGCTGGAAAAGGCTaGTCCTCACCTCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRADAGKG*SSPRVP
Trigger: TGGAACTCGAGGTGAGGATCAGCCTTTTCCAGCATC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTTCAGTACCACCGGGCTaGATGGAAGCAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGSVPPG*MEAVSR
Trigger: CCTGCTGACTGCTTCCATTCAGCCCGGTGGTACTGA...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTTCGCCATCCACCTGCTaGTCCCGGAAGCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTSPSTC*SRKLSQ
Trigger: CTGCGAGAGCTTCCGGGAGCAGCAGGTGGATGGCGA...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCATGGTCTTGCATaGACTTGTCCAGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGSHGLA*TCPVLQ
Trigger: CTGGAGCACTGGACAAGTGCATGCAAGACCATGACT...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACAAAGTAAGCACAGCCTaGATGTCCTCAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHKVSTA*MSSGRT
Trigger: GGTCCTGCCTGAGGACATGCAGGCTGTGCTTACTTT...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACTTTGTGAGGGCTTCGTaGTTTAGAGATTTGCTACCC +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHFVRAS*FRDLLP
Trigger: GGGTAGCAAATCTCTAAAGCACGAAGCCCTCACAAA...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGCTTGTGTCTTGTGGGTaGTTAGTCTGTAATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLGLPPVQGSGECSISALLVSCG*LVCNCS
Trigger: AGAGCAATTACAGACTAAGCACCCACAAGACACAAG...CAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR GCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGTGTCTTGTCCCAGGTTaGCCCTCTCCTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQCLVPG*PSPCRW
Trigger: CCATCTGCAAGGAGAGGGGCAACCTGGGACAAGACA...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCTGCCAAATCTCCGTCTaGTTTCCTCTTATAAAGATA +
Preference number: 4 (lower is better)
Translates to: PMTETDNPMAGPGGVLTSCQISV*FPLIKI
Trigger: TATCTTTATAAGAGGAAAGCAGACGGAGATTTGGCA...GGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAGCTGATGAAGACATCTaGAGTGTCCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGADEDI*SVPTGF
Trigger: AAACCCAGTGGGGACACTCCAGATGTCTTCATCAGC...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp TCTCAGGATCTGGGTTTTAGTCCGAGCCCTGCCACAGGCCTGTTTCTTCATCTGCAATCCTTGCAGTCATaGTCTTGCATGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SQDLGFSPSPATGLFLHLQSLQS*SCMHLS
Trigger: GGACAAGTGCATGCAAGACCATGACTGCAAGGATTG...CAGATGAAGAAACAGGCCTGTGGCAGGGCTCGGACTAAAACCCAGATCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGCCTCCTGGTATTCGTaGGACCACTTGATACCGTTG +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAASWYS*DHLIPL
Trigger: CAACGGTATCAAGTGGTCCCACGAATACCAGGAGGC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTTAGGTTGGACCCATaGGTGCAGCACCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQVRLDP*VQHPPN
Trigger: GTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAAC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCCAGGCACAGTCTGAGTaGAGAGCCATGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSQAQSE*RAMMAL
Trigger: GAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTG...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATCAGCATCAGCTCACCTaGGAATCTGTAAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHQHQLT*ESVRNA
Trigger: TGCATTTCTTACAGATTCCCAGGTGAGCTGATGCTG...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACCCAGAGCCATGTCCCTaGATATTGTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHPEPCP*ILSSSS
Trigger: AGAGCTGGAGGACAATATCCAGGGACATGGCTCTGG...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCTTCCCATTTTATAGATaGAACTATGGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPFPFYR*NYGSRT
Trigger: AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAA...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCATCGGACTCCAGAGTATaGTATTTATTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSSDSRV*YLFLHR
Trigger: CCTGTGAAGAAATAAATACCATACTCTGGAGTCCGA...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGAACCTAAGCCCCACGTaGGGTATGGATAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRNLSPT*GMDRSS
Trigger: AGAGCTCCTATCCATACCCCACGTGGGGCTTAGGTT...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGACTCGAAGCCATCAATaGTGGGCACAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMTRSHQ*WAQCSC
Trigger: GCAAGAACATTGTGCCCATCATTGATGGCTTCGAGT...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTGACCAGGAAGGAGCCTaGGGCACAGCACCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTDQEGA*GTAPRH
Trigger: ATGCCTTGGTGCTGTGCCTCAGGCTCCTTCCTGGTC...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGATATCCTCAACCTTTCTaGGCCTCAGTGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRYPQPF*ASVSLS
Trigger: AGATAATGACACTGAGGCTCAGAAAGGTTGAGGATA...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCACCAGGCCTAGGTGCTTaGCCTGGTGATCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPPGLGA*PGDLSC
Trigger: ACAGCTCAGATCACCAGGTCAAGCACCTAGGCCTGG...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ACAGGGCAGTGGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAATCATCCCGGCTGTTCTaGTTGGGTAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGQWTTVEGIPNRNKTQESSRLF*LGNAGP
Trigger: GGGCCCTGCATTACCCAATCAGAACAGCCGGGATGA...TTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATCTGTTTCTTCATCTGTaGTGTGGGTGGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHLFLHL*CGWFAF
Trigger: AAAAGCAAACCACCCACATCACAGATGAAGAAACAG...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAAAGTAAGCACAGCCTaGATGTCCTCAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSKVSTA*MSSGRT
Trigger: GGTCCTGCCTGAGGACATGCAGGCTGTGCTTACTTT...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGTTGTTTTCTGTGCCCTaGCATATCCCTACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGLFSVP*HIPTKC
Trigger: GCACTTAGTAGGGATATGGCAGGGCACAGAAAACAA...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTTCAATGGTGGCCTCCTaGTATTCGTGGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSSMVAS*YSWDHL
Trigger: CAAGTGGTCCCACGAATACCAGGAGGCCACCATTGA...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCTCAGCCCAGGGAGACTaGTTTCAGGAGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSSAQGD*FQELFL
Trigger: AAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCTGA...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp AGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCACCCCATCCACATGGAGCGGAGTGTTTaGGAAATGGCAAAGATTTGT +
Preference number: 4 (lower is better)
Translates to: SALFGRGSQERPRHHPIHMERSV*EMAKIC
Trigger: ACAAATCTTTGCCATTTCCCAAACACTCCGCTCCAT...GTGGATGGGGTGGTGCCTTGGTCTCTCTTGACTACCTCGTCCAAAGAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGCTCTGTATGGCCTCTaGGTCAGCTTTTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLALYGL*VSFLLQ
Trigger: TTGCAACAAAAAGCTGACCCAGAGGCCATACAGAGC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTTGGATTGGTACCAAGTaGGGCCAGCCAGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGWIGTK*GQPGLL
Trigger: TAGAAGCCCTGGCTGGCCCCACTTGGTACCAATCCA...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGAATCCTTACCCTCTaGGTGTCTTGTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQGILTL*VSCPRL
Trigger: CAACCTGGGACAAGACACCCAGAGGGTAAGGATTCC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGCACACAGCTGTGAGGTaGTGGTGCCAGAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQHTAVR*WCQSWN
Trigger: ATTCCAACTCTGGCACCACCACCTCACAGCTGTGTG...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp TGGCAAAGATTTGTGAGGGCTTCGTGCTTTAGAGATTaGCTACCCTTAACCACCAGCATCAGCTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: WQRFVRASCFRD*LPLTTSISSPG
Trigger: CCCAGGTGAGCTGATGCTGGTGGTTAAGGGTAGCAAATCTCTAAAGCACGAAGCCCTCACAAATCTTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGAATGGCAAAGATTTGTaGGGGCTTCGTGCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMNGKDL*GLRALE
Trigger: CTCTAAAGCACGAAGCCCTCACAAATCTTTGCCATT...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTTATGCACCCAATCCTTaGAGTCATGGTCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAYAPNP*SHGLAC
Trigger: GCATGCAAGACCATGACTGCAAGGATTGGGTGCATA...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGTCACAATCTCCTTATaGACCCAATCCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMVTISL*TQSLQS
Trigger: TGACTGCAAGGATTGGGTGCATAAGGAGATTGTGAC...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTGGGCACAATGTTCTTaGCGCAGCTTAAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRWAQCS*RSLKQS
Trigger: TGACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCA...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAACTTCTGTTGGGTTGTTaGACATTTTGTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGELLLGC*TFCKLW
Trigger: CCACAGTTTACAAAATGTGCAACAACCCAACAGAAG...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACCTCTCCTCCTCTTTGTaGCTTCTCAATTCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHLSSSL*LLNSVG
Trigger: ACCGACAGAATTGAGAAGGCACAAAGAGGAGGAGAG...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTGATGGCCCTGGGGGATaGAGAGATGATAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSDGPGG*RDDKDA
Trigger: AGCATCTTTATCATCTCTGCATCCCCCAGGGCCATC...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGGCTGATGAAGACATCTaGAGTGTCCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGADEDI*SVPTGF
Trigger: AAACCCAGTGGGGACACTCCAGATGTCTTCATCAGC...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTGCCTCCTGGTATTCGTaGGACCACTTGATACCGTTG +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGASWYS*DHLIPL
Trigger: CAACGGTATCAAGTGGTCCCACGAATACCAGGAGGC...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGCTTCAGAAAGGACGATaGAAATGGAAGTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMLQKGR*KWKSQQ
Trigger: CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAG...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp CCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGACTTCAGAAAGGACGATaGAAATGGAAGTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PRETGFRSCSFRKDDGNGLQKGR*KWKSQQ
Trigger: CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAG...TCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACTCAGCCCAGGGAGACTaGTTTCAGGAGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYSAQGD*FQELFL
Trigger: AAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCTGA...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGTATTCCTGCTCTGTATaGCCTCTGGGTCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMYSCSV*PLGQLF
Trigger: AAAAAGCTGACCCAGAGGCCATACAGAGCAGGAATA...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGCCAGAAATCATCCCCTaGAGATACTCAGACACTGTA +
Preference number: 4 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMPEIIP*RYSDTV
Trigger: TACAGTGTCTGAGTATCTCCAGGGGATGATTTCTGG...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACCTGAAACAAACCTTCTaGTGCCTTGGGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYLKQTF*CLGLWG
Trigger: GCCCCAAAGCCCAAGGCACCAGAAGGTTTGTTTCAG...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCATTTTTCCATCTGTCCTaGAATGAGGATCTGATGATG +
Preference number: 4 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSFFHLS*NEDLMM
Trigger: CATCATCAGATCCTCATTCCAGGACAGATGGAAAAA...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTATGAGAGCTAGCAGGTaGCCAAGCCCAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTMRASR*PSPDKG
Trigger: GCCCTTGTCTGGGCTTGGCCACCTGCTAGCTCTCAT...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTATTTCTTCCAGCTTCTaGGGCTGCTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSISSSF*GCWHSL
Trigger: CAAGGAATGCCAGCAGCCCCAGAAGCTGGAAGAAAT...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGAGTGTGGCTGGACTTTTaGCCTTTAATGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGVWLDF*PLMSLS
Trigger: GCTCAGGGACATTAAAGGTCAAAAGTCCAGCCACAC...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTTTGCAGTCATGGTCTTaGATGCACTTGTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSLQSWS*MHLSSA
Trigger: AGCACTGGACAAGTGCATGCAAGACCATGACTGCAA...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAAGTTCTAACCTCCCGTaGCCAAGCCTGACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPSSNLP*PSLTSL
Trigger: AAGGGAAGTCAGGCTTGGGCACGGGAGGTTAGAACT...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGCGGCTAGATCAGCAATaGCCCAAATTGTTGAATCGT +
Preference number: 4 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVRLDQQ*PKLLNR
Trigger: ACGATTCAACAATTTGGGGCATTGCTGATCTAGCCG...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGAAGAGTGTTGCCTTTaGTGTGGTTGGGGAATCGAT +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQEECCL*CGWGID
Trigger: ATCGATTCCCCAACCACAGCAAAGGCAACACTCTTC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCTTAGTAGCCCCTCTGTaGCAGCTACTGTCCACATAT +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSLVAPL*QLLSTY
Trigger: ATATGTGGACAGTAGCTGGCACAGAGGGGCTACTAA...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTGCCTCTGGGTCTTTATaGCCCAGTCTGGAAACATTC +
Preference number: 4 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGASGSL*PSLETF
Trigger: GAATGTTTCCAGACTGGGGCATAAAGACCCAGAGGC...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCAAGCTGGGACCACTGGTaGACATTACCACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: YLGQESVLPFCYPSLITPSWDHW*TLPHLA
Trigger: AGCAAGGTGTGGTAATGTGCACCAGTGGTCCCAGCT...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCCAATCCTTGCAGTCATaGTCTTGCATGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSQSLQS*SCMHLS
Trigger: GGACAAGTGCATGCAAGACCATGACTGCAAGGATTG...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTAGCATTTCTGAAGTaGGCAATAGGCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQVAFLK*AIGSMV
Trigger: CACCATGCTGCCTATTGCCCACTTCAGAAATGCTAC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578128.5
CDS-3UTR CCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGGACTTTCTGATGATGTaGCCAAGAACTAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVDFLMM*PRTRSH
Trigger: GTGACTCCTAGTTCTTGGCCACATCATCAGAAAGTC...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGCAGTGGACAACAGTaGAGGGTATACCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAGSGQQ*RVYQIE
Trigger: TTCTATTTGGTATACCCTCCACTGTTGTCCACTGCC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATTTTTCTTTTATGTGCTaGGTTCTGTCAGATCACATG +
Preference number: 4 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHFSFMC*VLSDHM
Trigger: CATGTGATCTGACAGAACCCAGCACATAAAAGAAAA...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCATCTCCTCCGAATGCTTaGACATGTGCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPSPPNA*TCAPRC
Trigger: GCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGA...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCATCATCCTCCTCAAGCTaGCTGCTATCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPSSSSS*LLSAGE
Trigger: TTCTCCTGCTGATAGCAGTCAGCTTGAGGAGGATGA...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAGTAAGATGGGTGTGGTaGTGCCAGAGTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPVRWVW*CQSSLF
Trigger: AAACAGGGAACTCTGGCATCACCACACCCATCTTAC...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTACTCAACTGCTTGTCTaGCAATTAAGCAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRATQLLV*QLSRRE
Trigger: TTCCCTTCTGCTTAATTGTCAGACAAGCAGTTGAGT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTCACAATCTCCTTATaGACCCAATCCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQVTISL*TQSLQS
Trigger: TGACTGCAAGGATTGGGTGCATAAGGAGATTGTGAC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCGTCACAATCTCCTTATaGACCCAATCCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSVTISL*TQSLQS
Trigger: TGACTGCAAGGATTGGGTGCATAAGGAGATTGTGAC...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR GCA 90 bp ACAGGGCAGTGGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAATGCAGCAAAGCTGGCTaGAGTGACAAGGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TGQWTTVEGIPNRNKTQECSKAG*SDKEVR
Trigger: TCTGACTTCCTTGTCACTGCAGCCAGCTTTGCTGCA...TTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp ATATCTATAAAGAACAGCTTCTCCAGCCTCTGGGTCTTTATGCCCCAGTCTGGAAAAGGAACTCCCATTTaGTGTGTCCCTATGCCATGC +
Preference number: 4 (lower is better)
Translates to: ISIKNSFSSLWVFMPQSGKGTPI*CVPMPC
Trigger: GCATGGCATAGGGACACAGCAAATGGGAGTTCCTTT...TCCAGACTGGGGCATAAAGACCCAGAGGCTGGAGAAGCTGTTCTTTATAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAGGAGCCTGGGTTTATTaGAGGGTGCTTTCTTACCCT +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPGAWVY*RVLSYP
Trigger: AGGGTAAGAAAGCACCCTCCAATAAACCCAGGCTCC...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTGAACTAGGAGTCACCTaGCCAGCACAGCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVELGVT*PAQPRV
Trigger: CACTCTTGGCTGTGCTGGCCAGGTGACTCCTAGTTC...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTGAAGCAGTAGCATTTCTGCTTTaGTTGAAGCATAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: LPPVQGSGECSISALVEAVAFLL*LKHKNA
Trigger: TGCATTCTTATGCTTCAACCAAAGCAGAAATGCTAC...TGCTTCAACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACCGTGGTGATCACATTTaGATGGACAAGTTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHRGDHI*MDKLGN
Trigger: GTTTCCTAACTTGTCCATCCAAATGTGATCACCACG...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCATGGCAGCTTCATTCCTaGAATCCTTACCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPWQLHS*NPYPLG
Trigger: ACCCAGAGGGTAAGGATTCCAGGAATGAAGCTGCCA...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp AGAAGGGAACCTTTCCCTCCTGCTGATGGCCCTGGGGGATGCAGAGATGATAAAAACTGTGGGTTCTCCTaGTATATCTATAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: RREPFPPADGPGGCRDDKNCGFS*YIYKEQ
Trigger: CTGTTCTTTATAGATATACCAGGAGAACCCACAGTT...TTTATCATCTCTGCATCCCCCAGGGCCATCAGCAGGAGGGAAAGGTTCCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAAATCTCAACTTCTGTTaGGTTGTTGCACATTTTGTA +
Preference number: 4 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRNLNFC*VVAHFV
Trigger: TACAAAATGTGCAACAACCCAACAGAAGTTGAGATT...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACATCGTATACCTTCTTTaGAGGATCCACTGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHIVYLL*RIHCPV
Trigger: TACAGGACAGTGGATCCTCCAAAGAAGGTATACGAT...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp GTTAAAGTTGGAGAAGCTGCCCTAAGTGACAACCCTTaGCCTTTTCAGGACTTTGCCTCTTTCCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: VKVGEAALSDNP*PFQDFASFHRA
Trigger: AGCTCTGTGGAAAGAGGCAAAGTCCTGAAAAGGCAAAGGGTTGTCACTTAGGGCAGCTTCTCCAACTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp TTGACAGATAAAGAAACAGAGACCCAGGGGGTTACATaGGCTCACCCAAGGTTACTCAGTAAATGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LTDKETETQGVT*AHPRLLSKWWS
Trigger: GCTCCACCATTTACTGAGTAACCTTGGGTGAGCCAATGTAACCCCCTGGGTCTCTGTTTCTTTATCTGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
3UTR CAA 72 bp GTATTTACAGGTTCCAGGGCTATGAATCTGATGCCATaGGGCACCATTATTCAGCCTCCTATGCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VFTGSRAMNLMP*GTIIQPPMPQN
Trigger: GTTCTGAGGCATAGGAGGCTGAATAATGGTGCCCAATGGCATCAGATTCATAGCCCTGGAACCTGTAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp CTTTGGTTGAAGCATAAGAATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGCATTTCTGCTTTGGTTaGAGCATAAGAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LWLKHKNAAKAQSLVSCGHFCFG*SIRMQP
Trigger: TGGCTGCATTCTTATGCTTCAACCAAAGCAGAAATG...CCCACAAGACACAAGGGACTGAGCTTTGGCTGCATTCTTATGCTTCAACCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR TCA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGAAGCCTGTAAGTAACTaGATGCAAAGGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRKPVSN*MQREKE
Trigger: TTCCTTTTCCCTTTGCATTCAGTTACTTACAGGCTT...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTTTCCTGCTCCCAGTCTaGCTGCCATACGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTFLLPV*LPYVRQ
Trigger: TTGTCTAACGTATGGCAGGCAGACTGGGAGCAGGAA...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGTCAGTTCTCCCTTTCTaGTATCCATCACTTATAACC +
Preference number: 4 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVSVLPF*YPSLIT
Trigger: GGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGA...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCACCAGCACTTTCTCTGTaGCCAGAGATGTCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: YLGQESVLPFCYPSLITPPALSL*PEMSRE
Trigger: TTCTCTTGACATCTCTGGGCACAGAGAAAGTGCTGG...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACTCTCAATTCTGTCGGTaGCAAATCTCCGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYSQFCR*QISVCF
Trigger: AAAGCAGACGGAGATTTGGCACCGACAGAATTGAGA...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR GCA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTTTTGCTGTGTCCCTATaGCATGCTCTTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSFAVSL*HALHRC
Trigger: ACATCTATGAAGAGCATGGCATAGGGACACAGCAAA...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTCCTCAACCCTCGCCCTaGATGTGGCAAAAGATACCA +
Preference number: 4 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVPQPSP*MWQKIP
Trigger: TGGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGG...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGCTAATGACAGGAAAGTaGGCTTATCCTCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQLMTGK*AYPQPF
Trigger: GAAAGGTTGAGGATAAGCCCACTTTCCTGTCATTAG...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TATTTGGGACAGGAGTCAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCAGGGAGTGGGACTGATTaGAGACAAAGAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YLGQESVLPFCYPSLITPGSGTD*RQRARN
Trigger: ATTTCTGGCTCTTTGTCTCCAATCAGTCCCACTCCC...TGGGGTTATAAGTGATGGATAGCAGAAAGGGAGAACTGACTCCTGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp ACAGGGCAGTGGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAGGAAGTGTTTGTCCTAGTATaGGTGGCAGTCACCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TGQWTTVEGIPNRNKTQEVFVLV*VAVTSE
Trigger: TTCAGAGGTGACTGCCACCCATACTAGGACAAACAC...TTCCTGCGTTTTATTTCTATTTGGTATACCCTCCACTGTTGTCCACTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTTTCAAACCGCAGAGTTaGGATTTGCAGTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTFKPQS*DLQSAE
Trigger: CTCTGCTGACTGCAAATCCCAACTCTGCGGTTTGAA...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAGTTAGGAAACTTAGCTaGTTCTCTGAGATACTTCCC +
Preference number: 4 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPVRKLS*FSEILP
Trigger: GGGAAGTATCTCAGAGAATCAGCTAAGTTTCCTAAC...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR TCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTTCATACATTCTACAATaGGATGCCTCTCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVSYILQ*DASLHG
Trigger: CCCATGAAGAGAGGCATCTCATTGTAGAATGTATGA...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CCA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTTTTTACCTCATGTATTaGTTCCCTGAGATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVFYLMY*FPEIAV
Trigger: TACAGCAATCTCAGGGAACCAATACATGAGGTAAAA...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp ACACTTCGCGGGGCCCGCGGCCACCCGCAGCCCACCATGGGCCCGTaGCACCGCCCCCATCTGGCCCAGGCACCGCCAGCCGCTCGGCGC +
Preference number: 5 (lower is better)
Translates to: TLRGARGHPQPTMGP*HRPHLAQAPPAARR
Trigger: GCGCCGAGCGGCTGGCGGTGCCTGGGCCAGATGGGGGCGGTGGCACGGGCCCATGGTGGGCTGCGGGTGGCCGCGGGCCCCGCGAAGTGT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp CAGCTCCGGCAGCGCGCGCTCCAGGGCGTCCTGCACCTCGGTGCCTaGCCCCGGCGACACTTCGCGGGGCCCGCGGCCACCCGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: QLRQRALQGVLHLGA*PRRHFAGPAATRSP
Trigger: TGGGCTGCGGGTGGCCGCGGGCCCCGCGAAGTGTCGCCGGGGGCAGGCACCGAGGTGCAGGACGCCCTGGAGCGCGCGCTGCCGGAGCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp CCCACGGCCCGCGCGCCGCCCGCCTGCTTCAGCGCGGACAAGGCCTaGTGCAGCTCCGGCAGCGCGCGCTCCAGGGCGTCCTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: PTARAPPACFSADKA*CSSGSARSRASCTS
Trigger: CGAGGTGCAGGACGCCCTGGAGCGCGCGCTGCCGGAGCTGCAGCAGGCCTTGTCCGCGCTGAAGCAGGCGGGCGGCGCGCGGGCCGTGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp CTACCATGCGTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGCAGTTaGCCAGCGCCAGCGCGCAGTGGCGCAGCAGCGCGGGGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: LPCVAAPPGPRAARS*PAPARSGAAARGPC
Trigger: GCACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp GCCTGGCCCCCGTGCAGCGCGCAGTTGCCCAGCGCCAGCGCGCAGTaGCGCAGCAGCGCGGGGTCCGTGCGGCGGCACCAATACAGCACC +
Preference number: 5 (lower is better)
Translates to: AWPPCSAQLPSASAQ*RSSAGSVRRHQYST
Trigger: GGTGCTGTATTGGTGCCGCCGCACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp CGAGGCGCTGCAGGTCGTCGGGCCCGCGGCCCTGGCTTGTGTCGCTaGCGTCCACCAGACAGCGGGCGAAGCGGCCAGGGTCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: RGAAGRRARGPGLCR*RPPDSGRSGQGPAR
Trigger: CCTCGCTGGACCCTGGCCGCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp GCTGCGCGCTTCTCTACCATGCGTCGCTGCACCGCCTGGCCCCCGTaGAGCGCGCAGTTGCCCAGCGCCAGCGCGCAGTGGCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AARFSTMRRCTAWPP*SAQLPSASAQWRSS
Trigger: GCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp AGCAGGTCGAGGCCGCCATCGAGGCGGATGGCGTCGCACAGACCCTaGGCTACCTCGCGGCCCACGGCCGGCAGCAGCCAGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRSRPPSRRMASHRP*ATSRPTAGSSQASS
Trigger: GGAGGAGGCCTGGCTGCTGCCGGCCGTGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCGGCCTCGACCTGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 90 bp AGCCACTCGGCTGCGCGCTTCTCTACCATGCGTCGCTGCACCGCCTaGCCCCCGTGCAGCGCGCAGTTGCCCAGCGCCAGCGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SHSAARFSTMRRCTA*PPCSAQLPSASAQW
Trigger: CCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp TCGAGCAACGGCACGAGGCGCTGCAGGTCGTCGGGCCCGCGGCCCTaGCTTGTGTCGCTGGCGTCCACCAGACAGCGGGCGAAGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SSNGTRRCRSSGPRP*LVSLASTRQRAKRP
Trigger: TGGCCGCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTTGCTCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp CCTGCAGCAGCCGCAACAGCAGGTCGAGGCCGCCATCGAGGCGGATaGCGTCGCACAGACCCTGGGCTACCTCGCGGCCCACGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: PAAAATAGRGRHRGG*RRTDPGLPRGPRPA
Trigger: TGCCGGCCGTGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCGGCCTCGACCTGCTGTTGCGGCTGCTGCAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp AGCGGGAAGAGCCACTCGGCTGCGCGCTTCTCTACCATGCGTCGCTaGACCGCCTGGCCCCCGTGCAGCGCGCAGTTGCCCAGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SGKSHSAARFSTMRR*TAWPPCSAQLPSAS
Trigger: GCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp CGGGCGCGGTGCACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTaGTGCTCAGACACGCGGTGCAGCAGGGAGCGGTCCAGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: RARCTPRWMPQSSSS*CSDTRCSRERSRPQ
Trigger: CTGCGGCCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 90 bp TCCAGCAGGCGCGCGGCCTGCACACGCGTCTCCAACTCCGGCGCCTaGAGCAGCCGCAACAGCAGGTCGAGGCCGCCATCGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SSRRAACTRVSNSGA*SSRNSRSRPPSRRM
Trigger: CATCCGCCTCGATGGCGGCCTCGACCTGCTGTTGCGGCTGCTGCAGGCGCCGGAGTTGGAGACGCGTGTGCAGGCCGCGCGCCTGCTGGA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 90 bp ACGTCTGAACCTCGGCCTCCTTCCAGCTGGGCACGGAGGGCAGGATaGGCCGTGGCACCTCCTCGCCCAGCAGGCGCAGCGCGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: TSEPRPPSSWARRAG*AVAPPRPAGAARAW
Trigger: CCAAGCGCGCGCTGCGCCTGCTGGGCGAGGAGGTGCCACGGCCCATCCTGCCCTCCGTGCCCAGCTGGAAGGAGGCCGAGGTTCAGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS TCA 90 bp GCTGCTCAGACACGCGGTGCAGCAGGGAGCGGTCCAGGCCGCAGCTaGCCAGGCCGTAGGTGTACTGGCGGAAGCGCGGGTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AAQTRGAAGSGPGRS*PGRRCTGGSAGPGC
Trigger: GCAGCCTGGACCCGCGCTTCCGCCAGTACACCTACGGCCTGGTCAGCTGCGGCCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 90 bp CACTGCGCCTCCAAGCGGTTAGAGTCGAGCAACGGCACGAGGCGCTaGAGGTCGTCGGGCCCGCGGCCCTGGCTTGTGTCGCTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: HCASKRLESSNGTRR*RSSGPRPWLVSLAS
Trigger: GGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTTGCTCGACTCTAACCGCTTGGAGGCGCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp GCGCGGTGCACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTGCTaGTCAGACACGCGGTGCAGCAGGGAGCGGTCCAGGCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ARCTPRWMPQSSSSC*SDTRCSRERSRPQL
Trigger: CAGCTGCGGCCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS CCA 90 bp GCCCAGGCACCGCCAGCCGCTCGGCGCCCGGCCGTGGGCCCGACATaGCGAAGAAGCGACACAGCTTGTAGGCGGAGAGAAGCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: AQAPPAARRPAVGPT*RRSDTACRRREAAS
Trigger: TGACGCTGCTTCTCTCCGCCTACAAGCTGTGTCGCTTCTTCGCCATGTCGGGCCCACGGCCGGGCGCCGAGCGGCTGGCGGTGCCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp AGAAGGCGAGCGGGAAGAGCCACTCGGCTGCGCGCTTCTCTACCATaGGTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGCAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RRRAGRATRLRASLP*VAAPPGPRAARSCP
Trigger: TGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp CTCACTCTGGCCGCCGTGAGGATGCGGGCGCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGCAGCTGCTGCTCAGACACGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LTLAAVRMRARCTPR*MPQSSSSCCSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578128.5
CDS GCA 90 bp CAGCTCGTCCTCCTTGGAGAAGGCGAGCGGGAAGAGCCACTCGGCTaGGCGCTTCTCTACCATGCGTCGCTGCACCGCCTGGCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: QLVLLGEGEREEPLG*ALLYHASLHRLAPV
Trigger: CACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp CCCTCCGCATCACTCACTCTGGCCGCCGTGAGGATGCGGGCGCGGTaGACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PSASLTLAAVRMRAR*TPRWMPQSSSSCCS
Trigger: TGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGTGAGTGATGCGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578128.5
CDS CCA 90 bp ATTGCTCTGGCCGCCGTGAGGATGCGGGCGCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGCAGCTGCTGCTCAGACACGCGGTGC +
Preference number: 5 (lower is better)
Translates to: IALAAVRMRARCTPR*MPQSSSSCCSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGCAAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS CCA 90 bp AACCGATCTGCTGCAGCCACGTCTGAACCTCGGCCTCCTTCCAGCTaGGCACGGAGGGCAGGATGGGCCGTGGCACCTCCTCGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: NRSAAATSEPRPPSS*ARRAGWAVAPPRPA
Trigger: TGCTGGGCGAGGAGGTGCCACGGCCCATCCTGCCCTCCGTGCCCAGCTGGAAGGAGGCCGAGGTTCAGACGTGGCTGCAGCAGATCGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp ATTTCTCTGGCCGCCGTGAGGATGCGGGCGCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGCAGCTGCTGCTCAGACACGCGGTGC +
Preference number: 5 (lower is better)
Translates to: ISLAAVRMRARCTPR*MPQSSSSCCSDTRC
Trigger: GCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGAAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379061.8
ENST00000585453.5
ENST00000585482.6
CDS GCA 90 bp TCCAGGCCGCCGGCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATaGTTGAACATGTGCTCCAAGATGCCTGCCACGCTCCGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRPPAATSLWHVSSE*LNMCSKMPATLRAS
Trigger: GCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGGCGGCCTGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp GGGGAGTGTAGCATTTCTCTGGCCGCCGTGAGGATGCGGGCGCGGTaGACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GECSISLAAVRMRAR*TPRWMPQSSSSCCS
Trigger: TGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGAAATGCTACACTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379061.8
ENST00000585453.5
ENST00000585482.6
CDS CCA 90 bp CCGCTACTGCGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTCCTTaGAGAAGGCGAGCGGGAAGAGCCACTCGGCTGCGCGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: PLLRGRRAAEAARPP*RRRAGRATRLRASL
Trigger: TAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 90 bp TCCTCCGTGAGCCGCAGAAGCAGGTCGCCATCCACCTGCTGCTCCTaGGGGAGGAGTCGGGTGTCAGGAAGGGCTTCGCTACTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: SSVSRRSRSPSTCCS*GRSRVSGRASLLRP
Trigger: AGGGCGGAGTAGCGAAGCCCTTCCTGACACCCGACTCCTCCCCCAGGAGCAGCAGGTGGATGGCGACCTGCTTCTGCGGCTCACGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS TCA 90 bp GGCCGCCGGCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATGCTTaGACATGTGCTCCAAGATGCCTGCCACGCTCCGCGCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: GRRPPPASGMSPPNA*TCAPRCLPRSAPAL
Trigger: TAGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGGCGGCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCGCCCGCGGCCCTGGCTaGTGTCGCTGGCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: QREGWFASTLALDVAKDTARGPG*CRWRPP
Trigger: TGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGC...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp AGTTCCTCCTCCGTGAGCCGCAGAAGCAGGTCGCCATCCACCTGCTaGTCCTGGGGGAGGAGTCGGGTGTCAGGAAGGGCTTCGCTACTC +
Preference number: 5 (lower is better)
Translates to: SSSSVSRRSRSPSTC*SWGRSRVSGRASLL
Trigger: GAGTAGCGAAGCCCTTCCTGACACCCGACTCCTCCCCCAGGAGCAGCAGGTGGATGGCGACCTGCTTCTGCGGCTCACGGAGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS GCA 90 bp GCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATGCTTGAACATGTaGTCCAAGATGCCTGCCACGCTCCGCGCCAGCTCTACGGGTTCG +
Preference number: 5 (lower is better)
Translates to: AATSLWHVSSECLNM*SKMPATLRASSTGS
Trigger: CGAACCCGTAGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp TCCACCTCCTTGTTAGTCGCCAACACCGCTACTGCGAGGCAGGCGTaGAGCCGAAGCAGCTCGTCCTCCTTGGAGAAGGCGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: STSLLVANTATARQA*SRSSSSSLEKASGK
Trigger: CTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp CTCCACCTCGCGCTCCACCTCCTTGTTAGTCGCCAACACCGCTACTaGGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTCCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: LHLALHLLVSRQHRY*EAGVQPKQLVLLGE
Trigger: TTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGCGAGGTGGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS-3UTR CAA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGGGGGTAGGGTGGGCTTaGAGGCACGGCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQGVGWA*RHGLPM
Trigger: CATGGGGAGGCCGTGCCTCAAAGCCCACCCTACCCC...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTGCAGGCAGTGCTCCCTaGCAAGCCTCCAGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GTLPMTETDNPMAGPGGVAGSAP*QASRRE
Trigger: TTCTCTCCTGGAGGCTTGCAAGGGAGCACTGCCTGC...AACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS TCA 90 bp CCCGGTGAGCACTTGTGCCTCCAAACTGGTGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGATGATCTTCTC +
Preference number: 5 (lower is better)
Translates to: PGEHLCLQTGVRACR*VPGGAALQEADDLL
Trigger: GAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGACACCAGTTTGGAGGCACAAGTGCTCACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS CCA 90 bp CACCAATACAGCACCGCGTCCAGGCCGCCGGCCGCCACCAGCCTCTaGCATGTCTCCTCCGAATGCTTGAACATGTGCTCCAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: HQYSTASRPPAATSL*HVSSECLNMCSKMP
Trigger: AGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGGCGGCCTGGACGCGGTGCTGTATTGGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS-3UTR CAA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATAGGCGCAGCGCGCGCTaGGCCAGCGCCGACTTAGTG +
Preference number: 5 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHRRSAR*ASADLV
Trigger: CACTAAGTCGGCGCTGGCCAAGCGCGCGCTGCGCCT...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTACTGAGGAAAGTGGGTaGGAGGTGGGCCATGAGGGT +
Preference number: 5 (lower is better)
Translates to: RDPPHDGDRQPNGRAWGSTEESG*EVGHEG
Trigger: ACCCTCATGGCCCACCTCCAACCCACTTTCCTCAGT...ACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAGGAGAGACCCGGGTTTaGGGAAAAGAGGGACCCGAG +
Preference number: 5 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPGETRV*GKEGPE
Trigger: CTCGGGTCCCTCTTTTCCCAAAACCCGGGTCTCTCC...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCAGCAGTTCTTGGCCCTaGGGGAGAAGTAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSSSSWP*GRSRGR
Trigger: CCTCCCCCTACTTCTCCCCAAGGGCCAAGAACTGCT...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCCCCCACGGCCTGGAGCCTCAACAGAGTGGGATTaGAGGGGCCTGACACTGCTA +
Preference number: 5 (lower is better)
Translates to: NTWPLRGKSLQQPPRPGASTEWD*RGLTLL
Trigger: TAGCAGTGTCAGGCCCCTCAAATCCCACTCTGTTGA...GGCTCCAGGCCGTGGGGGCTGCTGAAGGCTCTTTCCCCGCAAGGGCCAGGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp CTGGCATGTCTCCTCCGAATGCTTGAACATGTGCTCCAAGATGCCTaGCACGCTCCGCGCCAGCTCTACGGGTTCGCGTTCCTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LACLLRMLEHVLQDA*HAPRQLYGFAFLRQ
Trigger: CTGGCGAAGGAACGCGAACCCGTAGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 90 bp TGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCATATCCATaGCCTGGCTCTGGCCCCGGTGAGCACTTGTGCCTCCAAACTGGT +
Preference number: 5 (lower is better)
Translates to: CPVRAVSRLPCLSYP*PGSGPGEHLCLQTG
Trigger: ACCAGTTTGGAGGCACAAGTGCTCACCGGGGCCAGAGCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS CCA 90 bp AAGAACCTCTTGCGGGTGATGCCCGATTTCATGCCCAGGTCGGTCTaGAGTTCCTCCTCCGTGAGCCGCAGAAGCAGGTCGCCATCCACC +
Preference number: 5 (lower is better)
Translates to: KNLLRVMPDFMPRSV*SSSSVSRRSRSPST
Trigger: GGTGGATGGCGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCCAGACCGACCTGGGCATGAAATCGGGCATCACCCGCAAGAGGTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379061.8
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS CCA 90 bp TGGGGGAGGAGTCGGGTGTCAGGAAGGGCTTCGCTACTCCGCCCTTaGACCTCGAGCACAAGATGCAAGGGAAGGAACTGGAGATGGCGT +
Preference number: 5 (lower is better)
Translates to: WGRSRVSGRASLLRP*TSSTRCKGRNWRWR
Trigger: ACGCCATCTCCAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAAGGGCGGAGTAGCGAAGCCCTTCCTGACACCCGACTCCTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS CCA 90 bp AGGAATGGAGAGAAGGGTACCAGGCAAGGGTGCCGGTCAGAAGTTTaGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGTTGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: RNGEKGTRQGCRSEV*GRSVGRIGGAVGKG
Trigger: ACCTTTGCCAACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACCCTTCTCTCCATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCACACCTTGGTCTTGCCTaGCAGGCTCTTGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPHLGLA*QALDGS
Trigger: GCTGCCATCAAGAGCCTGCAAGGCAAGACCAAGGTG...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGAGCCAGTCCGCCAGGTaGCTGCGGTCGCACGTAGAA +
Preference number: 5 (lower is better)
Translates to: CPHWVCHQYRAAGSVAFLSQSAR*LRSHVE
Trigger: TTCTACGTGCGACCGCAGCAACCTGGCGGACTGGCT...CAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CAA 90 bp TGTCCCCACTGGGTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGGTGTCCCCACTGGGTTaGCCACCAGTACAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CPHWVCHQYRAAGSVAFLVSPLG*PPVQGS
Trigger: GCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACAC...CAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CAA 90 bp TATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCCCTGGGCCCAGGCCCTaGCTCAGAATACAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: YSWDHLWAQEPMWFRQLGPGPRP*LRIQCP
Trigger: TGGGCACTGTATTCTGAGCAAGGGCCTGGGCCCAGG...GCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCACCTGGGCCCAGGCCCTaGCTCAGAATACAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSPGPRP*LRIQCP
Trigger: TGGGCACTGTATTCTGAGCAAGGGCCTGGGCCCAGG...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGAGAGCTGCCTGGTGGATaGGTACCAAGTGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PARASTDSLCNLEQAPLGELPGG*VPSGAS
Trigger: GCTGGCCCCACTTGGTACCAATCCACCAGGCAGCTC...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 90 bp CTACTCCGCCCTTGGACCTCGAGCACAAGATGCAAGGGAAGGAACTaGAGATGGCGTGGAGGAGGCGGATGGGACCTAGATCAGAGCCGA +
Preference number: 5 (lower is better)
Translates to: LLRPWTSSTRCKGRN*RWRGGGGWDLDQSR
Trigger: TCGGCTCTGATCTAGGTCCCATCCGCCTCCTCCACGCCATCTCCAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAAGGGCGGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCATGGGGACTGGTTAGGTaGGACCCATGGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSWGLVR*DPWVQH
Trigger: GTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCA...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp AGCCCAGACAAGGGCAGTCTCCATTCCTCCTTGACTACTGTCTTCCCACCCTCAGGATCGGGGGAGCGGTaGGCAAAGGTGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SPDKGSLHSSLTTVFPPSGSGER*AKVMQA
Trigger: GGCCTGCATCACCTTTGCCAACCGCTCCCCCGATCC...TGAGGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACTGCCCTTGTCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGGCAGGAGGACCACTaGAGCCCGGGAATTCAAGAT +
Preference number: 5 (lower is better)
Translates to: GDRQPNGRAWGSSNLPCPRQEDH*SPGIQD
Trigger: ATCTTGAATTCCCGGGCTCAAGTGGTCCTCCTGCCT...TGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGGCTGCTGGCATTCCTaGGCTTGGGGCGGCCATCAC +
Preference number: 5 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRGCWHS*AWGGHH
Trigger: GTGATGGCCGCCCCAAGCCAAGGAATGCCAGCAGCC...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CTGACTTCCCTTCCCTCTCCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATAGCAGCTCGTCCTCCTaGGAGAAGGCGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: LTSLPSPDTEESGLEVGHSSSSS*EKASGK
Trigger: CTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCT...ATGGCCCACCTCCAACCCACTTTCCTCAGTATCTGGAGAGGGAAGGGAAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAGCACCAACACAAAGTaGCGGGCACCCATGACACTC +
Preference number: 5 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPSTNTK*RAPMTL
Trigger: GAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCT...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGGGCCAGGCACAGTCTGAGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGTGGTCTTGCATGCACTaGTCCAGTGCTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: RGQAQSEWRAMMALIPGWWSCMH*SSAPGD
Trigger: ATCACCTGGAGCACTGGACAAGTGCATGCAAGACCA...CCAGCCAGGGATGAGTGCCATCATGGCTCTCCACTCAGACTGTGCCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp GGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGGCCTGGGGGAGTTGCTCACTTGATACCGTaGAAAGTAAGCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GTLPMTETDNPMAGPGGVAHLIP*KVSTAC
Trigger: GCAGGCTGTGCTTACTTTCAACGGTATCAAGTGAGC...AACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCACTGAGGAAAGTGGGTaGGAGGTGGGCCATGAGGGT +
Preference number: 5 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGTEESG*EVGHEG
Trigger: ACCCTCATGGCCCACCTCCAACCCACTTTCCTCAGT...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS CCA 90 bp GTTTGCCACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGAAGTaGGCAATAGGCAGCATGGTGAAGGTGGCCCCTCCGCATCACTCA +
Preference number: 5 (lower is better)
Translates to: VCHQYRAAGSVAFLK*AIGSMVKVAPPHHS
Trigger: TGAGTGATGCGGAGGGGCCACCTTCACCATGCTGCCTATTGCCCACTTCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000580711.1
CDS CCA 90 bp TTGGACCTCGAGCACAAGATGCAAGGGAAGGAACTGGAGATGGCGTaGAGGAGGCGGATGGGACCTAGATCAGAGCCGAGTGACCCTAAC +
Preference number: 5 (lower is better)
Translates to: LDLEHKMQGKELEMA*RRRMGPRSEPSDPN
Trigger: GTTAGGGTCACTCGGCTCTGATCTAGGTCCCATCCGCCTCCTCCACGCCATCTCCAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS-3UTR CAA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGATCGCGCTCCACCTCCTaGTTAGTCGCCAACACCGCT +
Preference number: 5 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLRSRSTS*LVANTA
Trigger: AGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGCGA...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGAGCCAGTCCGCCAGGTaGCTGCGGTCGCACGTAGAA +
Preference number: 5 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGSQSAR*LRSHVE
Trigger: TTCTACGTGCGACCGCAGCAACCTGGCGGACTGGCT...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCACACTCTGGATGAGTTaGTCCTCGAACTTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DRQPNGRAWGSSNLPCPSTLWMS*SSNLPA
Trigger: AGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGT...GCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp CTCAATGGTGGCCTCCTGGTATTCGTGGGACCACCTGTGGGCACAGGAGCCAATAGCACCAACACAAAGTaGCGGGCACCCATGACACTC +
Preference number: 5 (lower is better)
Translates to: LNGGLLVFVGPPVGTGANSTNTK*RAPMTL
Trigger: GAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCT...ATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATACCAGGAGGCCACCATTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp TGGTTAGGTTGGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCAGAGCCTGCGGCCCTGGGGCTCACTaGATACCGTTGAAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: WLGWTHGCSTLQTGVRACGPGAH*IPLKVS
Trigger: GCTTACTTTCAACGGTATCAAGTGAGCCCCAGGGCC...GCAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp ACAGACAACCCAATGGCAGGGCCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCTGCCTTTTCAGGACTTaGCCTCTTTCCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TDNPMAGPGGVLTSRAQACLFRT*PLSTEL
Trigger: CAGCTCTGTGGAAAGAGGCAAAGTCCTGAAAAGGCA...GGCTTGGGCACGGGAGGTTAGAACTCCCCCAGGCCCTGCCATTGGGTTGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCTCTCAGCTTCTCAGCTaGGGGAAGGAGGAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGSQLLS*GKEEVQ
Trigger: CTGAACCTCCTCCTTCCCCAAGCTGAGAAGCTGAGA...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CCAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTAGGATGGTCTTGCATGCACTaGTCCAGTGCTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: PARASTDSLCNLEQAPLGWSCMH*SSAPGD
Trigger: ATCACCTGGAGCACTGGACAAGTGCATGCAAGACCA...TCCTAGTGGGGCTTGCTCAAGGTTGCACAGCGAGTCAGTAGAAGCCCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCACTTGCAGTCATGGTCTaGCATGCACTTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSLAVMV*HALVQC
Trigger: GCACTGGACAAGTGCATGCAAGACCATGACTGCAAG...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCCAGGACAAGCAACTCTaGTCTAAGGGCAGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: QREGWFASTLALDVAKDTQDKQL*SKGSAL
Trigger: GAGAGCACTGCCCTTAGACAAGAGTTGCTTGTCCTG...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCAGTCTCCATTCCTCCTaGACTACTGTCTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: QREGWFASTLALDVAKDTSLHSS*TTVFPP
Trigger: GGGTGGGAAGACAGTAGTCAAGGAGGAATGGAGACT...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp TTGCCTGCTTCCAGCTTCTCCACATCAATGAAGACACTGAAGCCATaGAGCTGCAGGTGCACCTTCAGGAGACTGGCCAGCTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: LPASSFSTSMKTLKP*SCRCTFRRLASWEP
Trigger: AGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAGTGTCTTCATTGATGTGGAGAAGCTGGAAGCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000585453.5
ENST00000585482.6
CDS-3UTR CAA 90 bp TCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCGTCTCCTCCGAATGCTaGAACATGTGCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: SPELSRDPPHDGDRQPNGVSSEC*NMCSKM
Trigger: CATCTTGGAGCACATGTTCAAGCATTCGGAGGAGAC...GCCATTGGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TCACAGACCCCTCTAGATGTGACAGAATTTAATCTCAACTTCTGTTGGGTTGTTCCGTGCAGCGCGCAGTaGCCCAGCGCCAGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: SQTPLDVTEFNLNFCWVVPCSAQ*PSASAQ
Trigger: CTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGG...AACAACCCAACAGAAGTTGAGATTAAATTCTGTCACATCTAGAGGGGTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGTGTCCCCACTGGGTTaGCCACCAGTACAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAVSPLG*PPVQGS
Trigger: GCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACAC...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CAA 90 bp TATTCGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGCATGGGCACAATGTTCTaGCCGCAGCTTAAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: YSWDHLWAQEPMWFRQLGMGTMF*PQLKAV
Trigger: GACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCAT...GCCCAGCTGTCTGAACCACATTGGCTCCTGTGCCCACAGGTGGTCCCACGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGGCCCCGGTGAGCACTaGTGCTGCATGAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLGPGEH*CCMRKG
Trigger: TCCTTTCCTCATGCAGCACAAGTGCTCACCGGGGCC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGCCCTGCTTGTCGACACTGTATTGTTATaGGCGCTGTCCTGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: VLLLALSCEGSVQAALLVDTVLL*ALSCEG
Trigger: GCCCTCACAGGACAGCGCCAATAACAATACAGTGTC...GACAAGCAGGGCAGCCTGGACACTGCCCTCACAGGACAGCGCCAATAACAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACGTGCCGGTCAGAAGTTaGGGGGAGGAGTGTCGGCAG +
Preference number: 5 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHVPVRS*GEECRQ
Trigger: CTGCCGACACTCCTCCCCCAAACTTCTGACCGGCAC...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATTGGGGAATCGATCCTaGGCTATGGCCTACCCACTC +
Preference number: 5 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGELGNRS*AMAYPL
Trigger: GAGTGGGTAGGCCATAGCCAAGGATCGATTCCCCAA...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTGACTTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAAGGCCAGGAAGCTTaGTCAGCTAGTTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CDFSCSSWGWMLDSDSLREGQEA*SASCGW
Trigger: CCAGCCACAACTAGCTGACAAAGCTTCCTGGCCTTC...TCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGGTGTCTTGTCCCAGGTaGCCCCTCTCCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGVSCPR*PLSLQM
Trigger: CATCTGCAAGGAGAGGGGCAACCTGGGACAAGACAC...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGTACCCTCTGGGTGTCTaGTCCCAGGTTGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMYPLGV*SQVAPL
Trigger: GAGAGGGGCAACCTGGGACAAGACACCCAGAGGGTA...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAGGAGGATCATGCCACCTaGGATTTTCAAACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: DRGRESHFLRRAQVVSAQEDHAT*DFQTAE
Trigger: CTCTGCGGTTTGAAAATCCAAGGTGGCATGATCCTC...CTGGGCTGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CCAGTGTCTCCAGAACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAAAAGGAACTCCCATTaGCTGTGTCCCTATGCCATG +
Preference number: 5 (lower is better)
Translates to: PVSPELSRDPPHDGDRQPKRNSH*LCPYAM
Trigger: CATGGCATAGGGACACAGCAAATGGGAGTTCCTTTT...GGGTTGTCTGTCTCCGTCATGGGGAGGGTCCCTGCTCAGTTCTGGAGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGAGCACCAACACAAAGTaGCGGGCACCCATGACACTC +
Preference number: 5 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGSTNTK*RAPMTL
Trigger: GAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCT...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAACTTGCAGTCATGGTCTaGCATGCACTTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGELAVMV*HALVQC
Trigger: GCACTGGACAAGTGCATGCAAGACCATGACTGCAAG...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp ACTGGGGACTGGTTAGGTTGGACCCATGGGTGCAGCACCCTCCAAACTGGTGTCTTATGCACCCAATCCTaGCAGTCATGGTCTTGCATG +
Preference number: 5 (lower is better)
Translates to: TGDWLGWTHGCSTLQTGVLCTQS*QSWSCM
Trigger: CATGCAAGACCATGACTGCAAGGATTGGGTGCATAA...GACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579593.1
CDS-3UTR CAA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTGGGGACTGGTTAGGTaGGACCCATGGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRWGLVR*DPWVQH
Trigger: GTGCTGCACCCATGGGTCCAACCTAACCAGTCCCCA...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp GAAGGCCTTATTATCTTCCTCATACAGGGAGTCAGGATCAGAGAGGGTAAGTACAGAGGGAGGGCTGGTTaGCCTCAACCCTCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EGLIIFLIQGVRIREGKYRGRAG*PQPSPW
Trigger: CCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCT...GTACTTACCCTCTCTGATCCTGACTCCCTGTATGAGGAAGATAATAAGGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCACTCTGGGTCAGCTTTTaGTTGCAAAATCCTATCCCC +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSLWVSF*LQNPIP
Trigger: GGGGATAGGATTTTGCAACAAAAAGCTGACCCAGAG...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCAGCTGTTCCAGCTGGGGCTGGATGCTGGACTCTGATTCCCTCAGAGAGACATTGCCTTTGCTGTGGTaGGGGAATCGATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FSCSSWGWMLDSDSLRETLPLLW*GNRSLA
Trigger: AGCCAAGGATCGATTCCCCAACCACAGCAAAGGCAA...TGTCTCTCTGAGGGAATCAGAGTCCAGCATCCAGCCCCAGCTGGAACAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGCCATGGGGGCTGCCTGGTCTTTCAAACCGCAGAGTaGGGATTTGCAGTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: QSCRFCLGCFYCHGGCLVFQTAE*GFAVSR
Trigger: TCTGCTGACTGCAAATCCCAACTCTGCGGTTTGAAA...GACCAGGCAGCCCCCATGGCAGTAAAAGCAGCCTAGACAGAACCTGCAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCACATCGTATACCTTCTTaGGAGGATCCACTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSHRIPS*EDPLSC
Trigger: ACAGGACAGTGGATCCTCCAAAGAAGGTATACGATG...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGTCCCTAAAGAACCTCTaGCGGGTGATGCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGSLKNL*RVMPDF
Trigger: GAAATCGGGCATCACCCGCAAGAGGTTCTTTAGGGA...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTGTGTCCCCACTGGGTTaGCCACCAGTACAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGVSPLG*PPVQGS
Trigger: GCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACAC...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GAGGGGCTTGGTGATCTCTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAAATGGGCACAATGTTCTaGCCGCAGCTTAAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: EGLGDLWRKSVAFAVVGEMGTMF*PQLKAV
Trigger: GACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCAT...TTCCCCAACCACAGCAAAGGCAACACTCTTCCTCCAGAGATCACCAAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGGGGGACAGGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCATATTCGTGGGACCACTaGATACCGTTGAAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: VGDRGRESHFLRRAQVVSYSWDH*IPLKVS
Trigger: GCTTACTTTCAACGGTATCAAGTGGTCCCACGAATA...TGAGACAACCTGGGCTCTTCTTAGGAAATGGCTCTCCCTCCCCCTGTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp ACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCTCCAGGCTGCCCTGCTaGTCATATCCATGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: TGFRSCSFRKDDGNGSHSSRLPC*SYPCPG
Trigger: GCCAGGGCATGGATATGACAAGCAGGGCAGCCTGGA...GCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTAAACCTTCTGGTGCCTaGGGCTTTGGGGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAKPSGA*GFGALC
Trigger: ACAGAGGGCCCCAAAGCCCAAGGCACCAGAAGGTTT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGGAGGTAAGAGGGGCTaGGTGATCTCTGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLGGKRG*VISGGR
Trigger: TCTTCCTCCAGAGATCACCAAGCCCCTCTTACCTCC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp AGCTTCTCCACATCAATGAAGACACTGAAGCCATGCAGCTGCAGGTaGACCTTCAGGAGACTGCAAGTAAGTCCTGTGTCAGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: SFSTSMKTLKPCSCR*TFRRLQVSPVSVPQ
Trigger: CTGTGGCACTGACACAGGACTTACTTGCAGTCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAGTGTCTTCATTGATGTGGAGAAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577870.2
CDS GCA 90 bp TTGCCTGCTTCCAGCTTCTCCACATCAATGAAGACACTGAAGCCATaGAGCTGCAGGTGCACCTTCAGGAGACTGCAAGTAAGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LPASSFSTSMKTLKP*SCRCTFRRLQVSPV
Trigger: CACAGGACTTACTTGCAGTCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAGTGTCTTCATTGATGTGGAGAAGCTGGAAGCAGGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577870.2
CDS-3UTR CAA 90 bp CACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGTCCCTAAAGAACCTCTaGCGGGTGATGCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: HQYRAAGSVAFLLWLKHKSLKNL*RVMPDF
Trigger: GAAATCGGGCATCACCCGCAAGAGGTTCTTTAGGGA...CTTATGCTTCAACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CAA 90 bp CAGAGGGAGGGCTGGTTTGCCTCAACCCTCGCCCTGGATGTGGCAAAAGATACCCAATGCCCCAAATTGTaGAATCGTGGTGATCACATT +
Preference number: 5 (lower is better)
Translates to: QREGWFASTLALDVAKDTQCPKL*NRGDHI
Trigger: AATGTGATCACCACGATTCAACAATTTGGGGCATTG...GGTATCTTTTGCCACATCCAGGGCGAGGGTTGAGGCAAACCAGCCCTCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCGGAAGAGTGTTGCCTTaGCTGTGGTTGGGGAATCGA +
Preference number: 5 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLGRVLP*LWLGNR
Trigger: TCGATTCCCCAACCACAGCAAAGGCAACACTCTTCC...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTATGTCGCTGAACACCTaGGTCTTGCCTTGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSMSLNT*VLPCRL
Trigger: GAGCCTGCAAGGCAAGACCAAGGTGTTCAGCGACAT...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CAAAGCCCATGCTTGTTTTCTGTGCCCTGCCATATCCCTACTAAGTGCCAAGTGAAGCTCTCGCAGTACTaGGAGAAACCGATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QSPCLFSVPCHIPTKCQVKLSQY*EKPICC
Trigger: GCAGCAGATCGGTTTCTCCAAGTACTGCGAGAGCTT...CACTTGGCACTTAGTAGGGATATGGCAGGGCACAGAAAACAAGCATGGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGTGGTCTTGCATGCACTaGTCCAGTGCTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: GFRSCSFRKDDGNGSHSRWSCMH*SSAPGD
Trigger: ATCACCTGGAGCACTGGACAAGTGCATGCAAGACCA...CCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTGGGTTATGCACCCAATCCTaGCAGTCATGGTCTTGCATG +
Preference number: 5 (lower is better)
Translates to: RSCSFRKDDGNGSHSRAGLCTQS*QSWSCM
Trigger: CATGCAAGACCATGACTGCAAGGATTGGGTGCATAA...CCCAGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp GATTTACTGGTGAGGAAGGGGAGACATAGGTTAAGTGACTACTCCCGGTCACACAGGGCAGTGCTCTCTTaGGACGAGGTAGTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: DLLVRKGRHRLSDYSRSHRAVLS*DEVVKR
Trigger: TCTCTTGACTACCTCGTCCAAAGAGAGCACTGCCCT...GTGTGACCGGGAGTAGTCACTTAACCTATGTCTCCCCTTCCTCACCAGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTCTCCAAAGCCCATGCTaGTTTTCTGTGCCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRALQSPC*FSVPCH
Trigger: ATGGCAGGGCACAGAAAACAAGCATGGGCTTTGGAG...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTCTGGCATTCCTTGGCTaGGGGCGGCCATCACCAGTC +
Preference number: 5 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTLAFLG*GRPSPV
Trigger: GACTGGTGATGGCCGCCCCAAGCCAAGGAATGCCAG...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp GCAGTCACAATCTCCTTATGCACCCAATCCTTGCAGTCATGGTCTTaGATGCACTTGTCCAGTGCTCCAGGTGATAGCACCAACACAAAG +
Preference number: 5 (lower is better)
Translates to: AVTISLCTQSLQSWS*MHLSSAPGDSTNTK
Trigger: CTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGATTGTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS-3UTR CAA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGCTTGCAGTCATGGTCTaGCATGCACTTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQLAVMV*HALVQC
Trigger: GCACTGGACAAGTGCATGCAAGACCATGACTGCAAG...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGGCTATGGGCACAATGTTCTaGCCGCAGCTTAAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: FRSCSFRKDDGNGSHSRAMGTMF*PQLKAV
Trigger: GACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCAT...AGCCCTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGTGGAGCCTGGGTTTATaGGAGGGTGCTTTCTTACCC +
Preference number: 5 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQWSLGL*EGAFLP
Trigger: GGGTAAGAAAGCACCCTCCAATAAACCCAGGCTCCA...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp GTGTCACTTCTCCAGACAGGCCTTGAGGGTTCCCCACATGAAATCCAAACTCTCAGTGTGGCTGGACTTTaGACCTTTAATGTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: VSLLQTGLEGSPHEIQTLSVAGL*TFNVPE
Trigger: CTCAGGGACATTAAAGGTCAAAAGTCCAGCCACACT...GAGAGTTTGGATTTCATGTGGGGAACCCTCAAGGCCTGTCTGGAGAAGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 90 bp TCACAATCTCCTTATGCACCCAATCCTTGCAGTCATGGTCTTGCATaGACTTGTCCAGTGCTCCAGGTGATAGCACCAACACAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: SQSPYAPNPCSHGLA*TCPVLQVIAPTQSC
Trigger: GCAACTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGATTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CCA 90 bp CTTAAAGCAGTCACAATCTCCTTATGCACCCAATCCTTGCAGTCATaGTCTTGCATGCACTTGTCCAGTGCTCCAGGTGATAGCACCAAC +
Preference number: 5 (lower is better)
Translates to: LKAVTISLCTQSLQS*SCMHLSSAPGDSTN
Trigger: GTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGATTGTGACTGCTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS-3UTR CAA 90 bp AGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTACACTCTGGATGAGTTaGTCCTCGAACTTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RETGFRSCSFRKDDGNGSTLWMS*SSNLPA
Trigger: AGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGT...ACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578128.5
ENST00000579593.1
ENST00000585482.6
CDS-3UTR CAA 90 bp TGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAAGTCACAGCAGGACCACTTGATACCGTaGAAAGTAAGCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: WFQELFLQKGRWKWKSQQDHLIP*KVSTAC
Trigger: GCAGGCTGTGCTTACTTTCAACGGTATCAAGTGGTC...CTGCTGTGACTTCCATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CAA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGTATTCGTGGGACCACTaGATACCGTTGAAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMYSWDH*IPLKVS
Trigger: GCTTACTTTCAACGGTATCAAGTGGTCCCACGAATA...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578128.5
ENST00000585482.6
CDS-3UTR CAA 90 bp CACCAGTACAGGGCAGCGGGGAGTGTAGCATTTCTGCTTTGGTTGAAGCATAAGGCATTTCTGCTTTGGTaGAAGCATAAGAATGCAGCC +
Preference number: 5 (lower is better)
Translates to: HQYRAAGSVAFLLWLKHKAFLLW*KHKNAA
Trigger: GGCTGCATTCTTATGCTTCAACCAAAGCAGAAATGC...CTTATGCTTCAACCAAAGCAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS-3UTR CAA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTGACCACTTGATACCGTaGAAAGTAAGCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGDHLIP*KVSTAC
Trigger: GCAGGCTGTGCTTACTTTCAACGGTATCAAGTGGTC...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAAGGATCAGGCTAACATaGCTGCTTGGCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPRIRLT*LLGKAV
Trigger: CACAGCCTTGCCAAGCAGCAATGTTAGCCTGATCCT...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp AGCCCAGGGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGTTTAATAGCAGCCATTaGTTTAGTAGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SPGRLVSGAVPSERTMEMFNSSH*FSSPSV
Trigger: CACAGAGGGGCTACTAAACAAATGGCTGCTATTAAA...CATTTCCATCGTCCTTTCTGAAGGAACAGCTCCTGAAACCAGTCTCCCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAACACTCTGGATGAGTTaGTCCTCGAACTTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPTLWMS*SSNLPA
Trigger: AGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGT...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTTGGCAGAGGAGCTATTaGGGACAGGAGTCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTWQRSY*GQESVL
Trigger: GAGAACTGACTCCTGTCCCAAATAGCTCCTCTGCCA...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCATTATGCACCCAATCCTaGCAGTCATGGTCTTGCATG +
Preference number: 5 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPLCTQS*QSWSCM
Trigger: CATGCAAGACCATGACTGCAAGGATTGGGTGCATAA...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp CAGGTTCCCAACACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTTACTCAGACACTGTATaGTTATTGGCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: QVPNTCSSHQPFLNNECGYSDTV*LLALSC
Trigger: ACAGGACAGCGCCAATAACAATACAGTGTCTGAGTA...ACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACACGTGTTGGGAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTGTGGGTGGTTTGCTTTaGATGACATCACAGACCCCT +
Preference number: 5 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTVGGLL*MTSQTP
Trigger: AGGGGTCTGTGATGTCATCAAAAGCAAACCACCCAC...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTCCGCTGCTAGATTCTTaGAAGCAAGGGAGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTPLLDS*KQGRSN
Trigger: ATTGCTTCTCCCTTGCTTCAAAGAATCTAGCAGCGG...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTTAGTGCCAATGAATCTGATGCCATaGGGCACCATTATTCAGCCT +
Preference number: 5 (lower is better)
Translates to: CSSHQPFLNNECGTWLVPMNLMP*GTIIQP
Trigger: AGGCTGAATAATGGTGCCCAATGGCATCAGATTCAT...TGGCACTAACCAGGTACCACATTCATTGTTAAGGAATGGCTGATGACTGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS-3UTR CAA 90 bp TTCCCCTATTTCCCTCCATTCCCATTTTATAGATGGAACTATGGCAGCAGAACTTTTCCTGATGAGTGTTaGTTTCTCCACAGGATATGG +
Preference number: 5 (lower is better)
Translates to: FPYFPPFPFYRWNYGSRTFPDEC*FLHRIW
Trigger: CCATATCCTGTGGAGAAACAAACACTCATCAGGAAA...AGTTCTGCTGCCATAGTTCCATCTATAAAATGGGAATGGAGGGAAATAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 72 bp GTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGCAGTTaGCCAGCGCCAGCGCGCAGTGGCGCAGCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: VAAPPGPRAARS*PAPARSGAAAR
Trigger: CCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp CGCGCGCCGCCCGCCTGCTTCAGCGCGGACAAGGCCTaGTGCAGCTCCGGCAGCGCGCGCTCCAGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: RAPPACFSADKA*CSSGSARSRAS
Trigger: GGACGCCCTGGAGCGCGCGCTGCCGGAGCTGCAGCAGGCCTTGTCCGCGCTGAAGCAGGCGGGCGGCGCGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 72 bp CGTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGCAGTaGCCCAGCGCCAGCGCGCAGTGGCGCAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: RRCTAWPPCSAQ*PSASAQWRSSA
Trigger: CGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp GCGCCAGCGCGCAGTGGCGCAGCAGCGCGGGGTCCGTaGGGCGGCACCAATACAGCACCGCGTCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: APARSGAAARGP*GGTNTAPRPGR
Trigger: GCGGCCTGGACGCGGTGCTGTATTGGTGCCGCCGCACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 72 bp CCGTGCAGCGCGCAGTTGCCCAGCGCCAGCGCGCAGTaGCGCAGCAGCGCGGGGTCCGTGCGGCGGCACCAA +
Preference number: 6 (lower is better)
Translates to: PCSAQLPSASAQ*RSSAGSVRRHQ
Trigger: TTGGTGCCGCCGCACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 90 bp TCTACCATGCGTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGCAGTaGCCCAGCGCCAGCGCGCAGTGGCGCAGCAGCGCGGGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: STMRRCTAWPPCSAQ*PSASAQWRSSAGSV
Trigger: CACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 72 bp GGCACGAGGCGCTGCAGGTCGTCGGGCCCGCGGCCCTaGCTTGTGTCGCTGGCGTCCACCAGACAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GTRRCRSSGPRP*LVSLASTRQRA
Trigger: CGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 72 bp GCAGGTCGTCGGGCCCGCGGCCCTGGCTTGTGTCGCTaGCGTCCACCAGACAGCGGGCGAAGCGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: AGRRARGPGLCR*RPPDSGRSGQG
Trigger: ACCCTGGCCGCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CCA 72 bp AGGCCGCCATCGAGGCGGATGGCGTCGCACAGACCCTaGGCTACCTCGCGGCCCACGGCCGGCAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RPPSRRMASHRP*ATSRPTAGSSQ
Trigger: CTGGCTGCTGCCGGCCGTGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCGGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 72 bp CGAGGCGCTGCAGGTCGTCGGGCCCGCGGCCCTGGCTaGTGTCGCTGGCGTCCACCAGACAGCGGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: RGAAGRRARGPG*CRWRPPDSGRS
Trigger: GCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 90 bp GCAACGGCACGAGGCGCTGCAGGTCGTCGGGCCCGCGGCCCTGGCTaGTGTCGCTGGCGTCCACCAGACAGCGGGCGAAGCGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ATARGAAGRRARGPG*CRWRPPDSGRSGQG
Trigger: ACCCTGGCCGCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp GCGGGAAGAGCCACTCGGCTGCGCGCTTCTCTACCATaGGTCGCTGCACCGCCTGGCCCCCGTGCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: AGRATRLRASLP*VAAPPGPRAAR
Trigger: GCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp CGCGCGGCCTGCACACGCGTCTCCAACTCCGGCGCCTaGAGCAGCCGCAACAGCAGGTCGAGGCCGCCATCG +
Preference number: 6 (lower is better)
Translates to: RAACTRVSNSGA*SSRNSRSRPPS
Trigger: CGATGGCGGCCTCGACCTGCTGTTGCGGCTGCTGCAGGCGCCGGAGTTGGAGACGCGTGTGCAGGCCGCGCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 72 bp GCTGCGCGCTTCTCTACCATGCGTCGCTGCACCGCCTaGCCCCCGTGCAGCGCGCAGTTGCCCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: AARFSTMRRCTA*PPCSAQLPSAS
Trigger: GCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp TTCTCTACCATGCGTCGCTGCACCGCCTGGCCCCCGTaGAGCGCGCAGTTGCCCAGCGCCAGCGCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: FSTMRRCTAWPP*SAQLPSASAQW
Trigger: CCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp AGCCACTCGGCTGCGCGCTTCTCTACCATGCGTCGCTaGACCGCCTGGCCCCCGTGCAGCGCGCAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: SHSAARFSTMRR*TAWPPCSAQLP
Trigger: GGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp CCAGCGAGGCCACAAGCGGCTCCACGAGCGCCAGCGTaGCCGAGCGCTCCACCTCGCGCTCCACCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: PARPQAAPRAPA*PSAPPRAPPPC
Trigger: ACAAGGAGGTGGAGCGCGAGGTGGAGCGCTCGGGCACGCTGGCGCTCGTGGAGCCGCTTGTGGCCTCGCTGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp GGCCGTAGGTGTACTGGCGGAAGCGCGGGTCCAGGCTaGCCAGCCAGTCCGCCAGGTTGCTGCGGTCGCACG +
Preference number: 6 (lower is better)
Translates to: GRRCTGGSAGPG*PASPPGCCGRT
Trigger: CGTGCGACCGCAGCAACCTGGCGGACTGGCTGGGCAGCCTGGACCCGCGCTTCCGCCAGTACACCTACGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379061.8
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp CGCGCCACGCGGTCTCGGTTCTCAGCCACCAGGATCTaGTCCAGCAGGCGCGCGGCCTGCACACGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: RATRSRFSATRI*SSRRAACTRVS
Trigger: GGAGACGCGTGTGCAGGCCGCGCGCCTGCTGGAGCAGATCCTGGTGGCTGAGAACCGAGACCGCGTGGCGCG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 72 bp GCCGCAACAGCAGGTCGAGGCCGCCATCGAGGCGGATaGCGTCGCACAGACCCTGGGCTACCTCGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: AATAGRGRHRGG*RRTDPGLPRGP
Trigger: TGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCGGCCTCGACCTGCTGTTGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS GCA 72 bp TCAGCCACCAGGATCTGCTCCAGCAGGCGCGCGGCCTaGACACGCGTCTCCAACTCCGGCGCCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SATRICSSRRAA*TRVSNSGACSS
Trigger: GCTGCTGCAGGCGCCGGAGTTGGAGACGCGTGTGCAGGCCGCGCGCCTGCTGGAGCAGATCCTGGTGGCTGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 72 bp GCCGCCGTGAGGATGCGGGCGCGGTGCACGCCCAGGTaGATGCCGCAGTCTTCCAGCAGCTGCTGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: AAVRMRARCTPR*MPQSSSSCCSD
Trigger: GTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS CCA 72 bp CCGCCAGCCGCTCGGCGCCCGGCCGTGGGCCCGACATaGCGAAGAAGCGACACAGCTTGTAGGCGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: PPAARRPAVGPT*RRSDTACRRRE
Trigger: TTCTCTCCGCCTACAAGCTGTGTCGCTTCTTCGCCATGTCGGGCCCACGGCCGGGCGCCGAGCGGCTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 90 bp ACGAGCGCCAGCGTGCCCGAGCGCTCCACCTCGCGCTCCACCTCCTaGTTAGTCGCCAACACCGCTACTGCGAGGCAGGCGTGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: TSASVPERSTSRSTS*LVANTATARQACSR
Trigger: TCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGCGAGGTGGAGCGCTCGGGCACGCTGGCGCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp TCCAAGCGGTTAGAGTCGAGCAACGGCACGAGGCGCTaGAGGTCGTCGGGCCCGCGGCCCTGGCTTGTGTCG +
Preference number: 6 (lower is better)
Translates to: SKRLESSNGTRR*RSSGPRPWLVS
Trigger: CGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTTGCTCGACTCTAACCGCTTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp CCGCAGTCTTCCAGCAGCTGCTGCTCAGACACGCGGTaGAGCAGGGAGCGGTCCAGGCCGCAGCTGACCAGG +
Preference number: 6 (lower is better)
Translates to: PQSSSSCCSDTR*SRERSRPQLTR
Trigger: CCTGGTCAGCTGCGGCCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp TCACTCACTCTGGCCGCCGTGAGGATGCGGGCGCGGTaGACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SLTLAAVRMRAR*TPRWMPQSSSS
Trigger: GCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGTGAGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578128.5
CDS CCA 72 bp CGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTCCTTaGAGAAGGCGAGCGGGAAGAGCCACTCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: RGRRAAEAARPP*RRRAGRATRLR
Trigger: GCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 72 bp GCGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTCCTaGGAGAAGGCGAGCGGGAAGAGCCACTCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: ARQACSRSSSSS*EKASGKSHSAA
Trigger: CGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp ACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTGCTaGTCAGACACGCGGTGCAGCAGGGAGCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TPRWMPQSSSSC*SDTRCSRERSR
Trigger: CCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp TGCACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGCTaGTGCTCAGACACGCGGTGCAGCAGGGAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CTPRWMPQSSSS*CSDTRCSRERS
Trigger: GGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp AGCATTTCTCTGGCCGCCGTGAGGATGCGGGCGCGGTaGACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SISLAAVRMRAR*TPRWMPQSSSS
Trigger: GCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGAAATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379061.8
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp GTAATTGCTCTGGCCGCCGTGAGGATGCGGGCGCGGTaGACGCCCAGGTGGATGCCGCAGTCTTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VIALAAVRMRAR*TPRWMPQSSSS
Trigger: GCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGCAATTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS CAA 72 bp AGCGTGCCCGAGCGCTCCACCTCGCGCTCCACCTCCTaGTTAGTCGCCAACACCGCTACTGCGAGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: SVPERSTSRSTS*LVANTATARQA
Trigger: CGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGCGAGGTGGAGCGCTCGGGCACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 90 bp ACCGCTACTGCGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTCCTaGGAGAAGGCGAGCGGGAAGAGCCACTCGGCTGCGCGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TATARQACSRSSSSS*EKASGKSHSAARFS
Trigger: AGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp CTCCTTGGAGAAGGCGAGCGGGAAGAGCCACTCGGCTaGGCGCTTCTCTACCATGCGTCGCTGCACCGCCTG +
Preference number: 6 (lower is better)
Translates to: LLGEGEREEPLG*ALLYHASLHRL
Trigger: CAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 90 bp AGGCCGCCGGCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATGCTaGAACATGTGCTCCAAGATGCCTGCCACGCTCCGCGCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: RPPAATSLWHVSSEC*NMCSKMPATLRASS
Trigger: AGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGGCGGCCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp GTTCCTTCGCCAGGTTCAGGATCACGCCCAGCCCAATaGGCGCCACGCGGTCTCCTTTGCCAGCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: VPSPGSGSRPAQ*APRGLLCQLHA
Trigger: GGCATGGAGCTGGCAAAGGAGACCGCGTGGCGCGCATTGGGCTGGGCGTGATCCTGAACCTGGCGAAGGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS GCA 72 bp GCGCTCCACCTCCTTGTTAGTCGCCAACACCGCTACTaGGAGGCAGGCGTGCAGCCGAAGCAGCTCGTCCTC +
Preference number: 6 (lower is better)
Translates to: ALHLLVSRQHRY*EAGVQPKQLVL
Trigger: GAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp GTTCCTTCGCCAGGTTCAGGATCACGCCCAGCCCAATaGGCGCCACGCGGTCTCGGTTCTCAGCCACCAGGA +
Preference number: 6 (lower is better)
Translates to: VPSPGSGSRPAQ*APRGLGSQPPG
Trigger: TCCTGGTGGCTGAGAACCGAGACCGCGTGGCGCGCATTGGGCTGGGCGTGATCCTGAACCTGGCGAAGGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 72 bp AGCCGCAGAAGCAGGTCGCCATCCACCTGCTGCTCCTaGGGGAGGAGTCGGGTGTCAGGAAGGGCTTCGCTA +
Preference number: 6 (lower is better)
Translates to: SRRSRSPSTCCS*GRSRVSGRASL
Trigger: TAGCGAAGCCCTTCCTGACACCCGACTCCTCCCCCAGGAGCAGCAGGTGGATGGCGACCTGCTTCTGCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS GCA 72 bp CCAATGCGCGCCACGCGGTCTCCTTTGCCAGCTCCATaGCCAGCCCTGTGGATGCATCCTCAGCAGGTGATC +
Preference number: 6 (lower is better)
Translates to: PMRATRSPLPAP*PALWMHPQQVI
Trigger: GATCACCTGCTGAGGATGCATCCACAGGGCTGGGCATGGAGCTGGCAAAGGAGACCGCGTGGCGCGCATTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS CCA 72 bp GAGAAGGGTACCAGGCAAGGGTGCCGGTCAGAAGTTTaGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGTT +
Preference number: 6 (lower is better)
Translates to: EKGTRQGCRSEV*GRSVGRIGGAV
Trigger: AACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 72 bp TTTGGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGTaGGCAAAGGTGATGCAGGCCCAGATGCAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: FGGGVSAGSGER*AKVMQAQMQGV
Trigger: CACTCCCTGCATCTGGGCCTGCATCACCTTTGCCAACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 72 bp AGAGAAGGGTACCAGGCAAGGGTGCCGGTCAGAAGTTaGGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGT +
Preference number: 6 (lower is better)
Translates to: REGYQARVPVRS*GEECRQDRGSG
Trigger: ACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACCCTTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 90 bp GGTCAGAAGTTTGGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGTaGGCAAAGGTGATGCAGGCCCAGATGCAGGGAGTGGGCGAAAGG +
Preference number: 6 (lower is better)
Translates to: GQKFGGGVSAGSGER*AKVMQAQMQGVGER
Trigger: CCTTTCGCCCACTCCCTGCATCTGGGCCTGCATCACCTTTGCCAACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAACTTCTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CAA 90 bp CTGGGGGAGGAGTCGGGTGTCAGGAAGGGCTTCGCTACTCCGCCCTaGGACCTCGAGCACAAGATGCAAGGGAAGGAACTGGAGATGGCG +
Preference number: 6 (lower is better)
Translates to: LGEESGVRKGFATPP*DLEHKMQGKELEMA
Trigger: CGCCATCTCCAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAAGGGCGGAGTAGCGAAGCCCTTCCTGACACCCGACTCCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS CAA 90 bp GAGGAATGGAGAGAAGGGTACCAGGCAAGGGTGCCGGTCAGAAGTTaGGGGGAGGAGTGTCGGCAGGATCGGGGGAGCGGTTGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: EEWREGYQARVPVRS*GEECRQDRGSGWQR
Trigger: CCTTTGCCAACCGCTCCCCCGATCCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACCCTTCTCTCCATTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS TCA 72 bp CCGCCACCAGCCTCTGGCATGTCTCCTCCGAATGCTTaGACATGTGCTCCAAGATGCCTGCCACGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: PPPASGMSPPNA*TCAPRCLPRSA
Trigger: CGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS TCA 72 bp CACTTGTGCCTCCAAACTGGTGTCAGAGCCTGCAGATaGGTCCCGGGAGGAGCGGCCCTGCAGGAAGCGGAT +
Preference number: 6 (lower is better)
Translates to: HLCLQTGVRACR*VPGGAALQEAD
Trigger: ATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGACACCAGTTTGGAGGCACAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS GCA 72 bp CCGGCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATaGTTGAACATGTGCTCCAAGATGCCTGCCACGCTC +
Preference number: 6 (lower is better)
Translates to: PAATSLWHVSSE*LNMCSKMPATL
Trigger: GAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp TTGTTAGTCGCCAACACCGCTACTGCGAGGCAGGCGTaGAGCCGAAGCAGCTCGTCCTCCTTGGAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: LLVANTATARQA*SRSSSSSLEKA
Trigger: CGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS GCA 72 bp AGGGGGAGGAATGGAGAGAAGGGTACCAGGCAAGGGTaGCGGTCAGAAGTTTGGGGGAGGAGTGTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RGRNGEKGTRQG*RSEVWGRSVGR
Trigger: CCTGCCGACACTCCTCCCCCAAACTTCTGACCGGCACCCTTGCCTGGTACCCTTCTCTCCATTCCTCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585482.6
CDS CCA 72 bp TTGCGGGTGATGCCCGATTTCATGCCCAGGTCGGTCTaGAGTTCCTCCTCCGTGAGCCGCAGAAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LRVMPDFMPRSV*SSSSVSRRSRS
Trigger: CGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCCAGACCGACCTGGGCATGAAATCGGGCATCACCCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379061.8
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 72 bp GCCGCCACCAGCCTCTGGCATGTCTCCTCCGAATGCTaGAACATGTGCTCCAAGATGCCTGCCACGCTCCGC +
Preference number: 6 (lower is better)
Translates to: AATSLWHVSSEC*NMCSKMPATLR
Trigger: GCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS TCA 72 bp ATTTCATGCCCAGGTCGGTCTGGAGTTCCTCCTCCGTaGGCCGCAGAAGCAGGTCGCCATCCACCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ISCPGRSGVPPP*AAEAGRHPPAA
Trigger: AGCAGCAGGTGGATGGCGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCCAGACCGACCTGGGCATGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379061.8
ENST00000582323.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp CTCCTCCGAATGCTTGAACATGTGCTCCAAGATGCCTaGCACGCTCCGCGCCAGCTCTACGGGTTCGCGTTC +
Preference number: 6 (lower is better)
Translates to: LLRMLEHVLQDA*HAPRQLYGFAF
Trigger: GAACGCGAACCCGTAGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000585482.6
CDS CAA 90 bp CAGGTGATCTCAGTGTGTCGACATAGCTCCTGTCCAGCTCCTGGCTaGAGTCCACGGCAGGGCTGGGAAGGGGCTAAAGCTGTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: QVISVCRHSSCPAPG*SPRQGWEGAKAVAP
Trigger: TGGGGCTACAGCTTTAGCCCCTTCCCAGCCCTGCCGTGGACTCAAGCCAGGAGCTGGACAGGAGCTATGTCGACACACTGAGATCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS TCA 72 bp CATGCAGCTGCAGGTGCACCTGGCCAGCTGGGAACCTaGGTTCCGGCGGTAGCTGATGAAGACATCTGGAGT +
Preference number: 6 (lower is better)
Translates to: HAAAGAPGQLGT*VPAVADEDIWS
Trigger: ACTCCAGATGTCTTCATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCCAGGTGCACCTGCAGCTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379061.8
ENST00000580711.1
CDS CCA 72 bp AGTCGGGTGTCAGGAAGGGCTTCGCTACTCCGCCCTTaGACCTCGAGCACAAGATGCAAGGGAAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: SRVSGRASLLRP*TSSTRCKGRNW
Trigger: CCAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAAGGGCGGAGTAGCGAAGCCCTTCCTGACACCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS CAA 72 bp TCAGTGTGTCGACATAGCTCCTGTCCAGCTCCTGGCTaGAGTCCACGGCAGGGCTGGGAAGGGGCTAAAGCT +
Preference number: 6 (lower is better)
Translates to: SVCRHSSCPAPG*SPRQGWEGAKA
Trigger: AGCTTTAGCCCCTTCCCAGCCCTGCCGTGGACTCAAGCCAGGAGCTGGACAGGAGCTATGTCGACACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379061.8
CDS CAA 72 bp GAGTCGGGTGTCAGGAAGGGCTTCGCTACTCCGCCCTaGGACCTCGAGCACAAGATGCAAGGGAAGGAACTG +
Preference number: 6 (lower is better)
Translates to: ESGVRKGFATPP*DLEHKMQGKEL
Trigger: CAGTTCCTTCCCTTGCATCTTGTGCTCGAGGTCCAAGGGCGGAGTAGCGAAGCCCTTCCTGACACCCGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585453.5
CDS GCA 72 bp AATGCAGCCAAAGCTCAGTCCCTTGTGTCTTGTGGGTaGTTAGTCTGTAATTGCTCTGGCCGCCGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: NAAKAQSLVSCG*LVCNCSGRRED
Trigger: ATCCTCACGGCGGCCAGAGCAATTACAGACTAAGCACCCACAAGACACAAGGGACTGAGCTTTGGCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582323.1
CDS CAA 72 bp ACAAAGTTGCGGGCACCCATGACACTCTGGATGAGTTaGTCCTCGAACTTGCCTGCTTCCAGCTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: TKLRAPMTLWMS*SSNLPASSFST
Trigger: TGTGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGTCATGGGTGCCCGCAACTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 72 bp TTGTCCAGTGCTCCAGGTGATAGCACCAACACAAAGTaGCGGGCACCCATGACACTCTGGATGAGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LSSAPGDSTNTK*RAPMTLWMSLS
Trigger: GGACAAACTCATCCAGAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 90 bp TGGGGCTCAGGCCACTCGAAGCCATCAATGATGGGCACAATGTTCTaGCCGCAGCTTAAAGCAGTCACAATCTCCTTATGCACCCAATCC +
Preference number: 6 (lower is better)
Translates to: WGSGHSKPSMMGTMF*PQLKAVTISLCTQS
Trigger: GGATTGGGTGCATAAGGAGATTGTGACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCATCATTGATGGCTTCGAGTGGCCTGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 90 bp AGCACCAACACAAAGTTGCGGGCACCCATGACACTCTGGATGAGTTaGTCCTCGAACTTGCCTGCTTCCAGCTTCTCCACATCAATGAAG +
Preference number: 6 (lower is better)
Translates to: STNTKLRAPMTLWMS*SSNLPASSFSTSMK
Trigger: CTTCATTGATGTGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 90 bp ATCTCCTTATGCACCCAATCCTTGCAGTCATGGTCTTGCATGCACTaGTCCAGTGCTCCAGGTGATAGCACCAACACAAAGTTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: ISLCTQSLQSWSCMH*SSAPGDSTNTKLRA
Trigger: TGCCCGCAACTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CAA 72 bp TGCACCCAATCCTTGCAGTCATGGTCTTGCATGCACTaGTCCAGTGCTCCAGGTGATAGCACCAACACAAAG +
Preference number: 6 (lower is better)
Translates to: CTQSLQSWSCMH*SSAPGDSTNTK
Trigger: CTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS GCA 72 bp ACATCAATGAAGACACTGAAGCCATGCAGCTGCAGGTaGACCTTCAGGAGACTGCAAGTAAGTCCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: TSMKTLKPCSCR*TFRRLQVSPVS
Trigger: TGACACAGGACTTACTTGCAGTCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAGTGTCTTCATTGATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577870.2
CDS CCA 72 bp GTCACAATCTCCTTATGCACCCAATCCTTGCAGTCATaGTCTTGCATGCACTTGTCCAGTGCTCCAGGTGAT +
Preference number: 6 (lower is better)
Translates to: VTISLCTQSLQS*SCMHLSSAPGD
Trigger: ATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGATTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379061.8
ENST00000577870.2
ENST00000578128.5
ENST00000579593.1
ENST00000580711.1
ENST00000585453.5
ENST00000585482.6
CDS CCA 72 bp TGCAGGAAGCGGATGATCTTCTCAATGGTGGCCTCCTaGTATTCGTGGGACCACTTGATACCGTTGAAAGTA +
Preference number: 6 (lower is better)
Translates to: CRKRMIFSMVAS*YSWDHLIPLKV
Trigger: TACTTTCAACGGTATCAAGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379061.8
ENST00000578128.5
ENST00000585453.5
ENST00000585482.6