RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SARDH (Homo sapiens)

Ensembl gene IDs: ENSG00000123453

Ensembl transcript IDs: ENST00000298628.6, ENST00000371867.5, ENST00000371868.5, ENST00000371872.8, ENST00000422262.6, ENST00000427237.6, ENST00000439388.6, ENST00000469828.1

Found 829 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTaGGAATGGATGGACAGCATGGGATGGGGCATGTGGTCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: LAGSRVLGPRAIWDL*EWMDSMGWGMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR GCA 90 bp CCCAGAAGCTGCCCGGGAAACAGCCCAGGCCAGGGGAAATGCCGCTaGAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTA +
Preference number: 1 (lower is better)
Translates to: PRSCPGNSPGQGKCR*SSWLGGQCHLLKDV
Trigger: TACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTGGCCTGGGCTGTTTCCCGGGCAGCTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR GCA 90 bp TATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTaGCCGGGAAACAGCCCAGGCCAGGGGAAATGCCGCTGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: YTHRTGLQGCPNPRS*PGNSPGQGKCRCSS
Trigger: GCTGCTGCAGCGGCATTTCCCCTGGCCTGGGCTGTTTCCCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR CCA 90 bp TGCCCGGGAAACAGCCCAGGCCAGGGGAAATGCCGCTGCAGCAGCTaGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTGTG +
Preference number: 1 (lower is better)
Translates to: CPGNSPGQGKCRCSS*LGGQCHLLKDVGLV
Trigger: CACAAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTGGCCTGGGCTGTTTCCCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR CCA 90 bp CAGTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGG +
Preference number: 1 (lower is better)
Translates to: QSVTTGWAILVSVRI*FGGFRRTRPRLRTG
Trigger: CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR TCA 90 bp GGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGA +
Preference number: 1 (lower is better)
Translates to: GPVRMDGQHGMGHVV*ALSRFPSPSCCWGR
Trigger: TCGACCCCAACAACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422262.6
3UTR CCA 90 bp TCACGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACA +
Preference number: 1 (lower is better)
Translates to: SRGAYQVFTKHLLEA*KGLQAMVPEPKTLT
Trigger: TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
3UTR-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR TCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTGCCTTCCAGTCAGTaGCCACAGGATGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLLPSSQ*PQDGPS
Trigger: AGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGLGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCC +
Preference number: 2 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGAFWED*GGLETA
Trigger: GGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR TCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGCTGCCTTCCAGTCAGTaGCCACAGGATGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLLPSSQ*PQDGPS
Trigger: AGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAG...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 2 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR CAA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGCCTTCCAGTCAGTGACCACAGGATG +
Preference number: 2 (lower is better)
Translates to: WSLSPRHLQVCFLGG*GWIRDCLPVSDHRM
Trigger: CATCCTGTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGG +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVTSHGP*AQDTYR
Trigger: CCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGT...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGGGTGGATTAGAGACTaGCTTCCAGTCAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLGWIRD*LPVSDH
Trigger: GTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCC...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGAGACACTTACAGGTTTaGTTTCTGGGAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWRHLQV*FLGGLG
Trigger: CCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAATGGATGGACAGCATaGGATGGGGCATGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTNGWTA*DGACGL
Trigger: CAGACCACATGCCCCATCCCATGCTGTCCATCCATT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGAATGGATGGACAGCATaGGATGGGGCATGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLNGWTA*DGACGL
Trigger: CAGACCACATGCCCCATCCCATGCTGTCCATCCATT...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 2 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVLGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCC +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVAFWED*GGLETA
Trigger: GGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATG +
Preference number: 2 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWHLLEA*KGLQAM
Trigger: CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTG...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR TCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCTGCCTTCCAGTCAGTaGCCACAGGATGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVLPSSQ*PQDGPS
Trigger: AGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR GCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCACAGGGGAAATGCCGCTaGAGCAGCTGGTTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSQGKCR*SSWLGG
Trigger: CCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR-3UTR GCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCAGGCCAGGGGAAATaGCGCTGCAGCAGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVPGQGK*RCSSWL
Trigger: CAACCAGCTGCTGCAGCGGCATTTCCCCTGGCCTGG...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTAGACACTTACAGGTTTaGTTTCTGGGAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVRHLQV*FLGGLG
Trigger: CCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCT...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR GCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTAGGGTGGATTAGAGACTaGCTTCCAGTCAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLGWIRD*LPVSDH
Trigger: GTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCC...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 2 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR GCA 90 bp TTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACCACATAGAACAGGGCTaGAGGGCTGCCCTAACCCCA +
Preference number: 2 (lower is better)
Translates to: LVSLFLQKLKQFLAQSSHHIEQG*RAALTP
Trigger: TGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTG...GTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR-3UTR CCA 90 bp TTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACGCTGCAGCAGCTGGTTaGGAGGGCAGTGTCATTTGC +
Preference number: 2 (lower is better)
Translates to: LVSLFLQKLKQFLAQSSHAAAAG*EGSVIC
Trigger: GCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGC...GTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCAGACACTTACAGGTTTaGTTTCTGGGAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVRHLQV*FLGGLG
Trigger: CCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 2 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR GCA 72 bp AGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTaGCCGGGAAACAGCCCAGGCCAGGGGAAATGCCGC +
Preference number: 3 (lower is better)
Translates to: RTGLQGCPNPRS*PGNSPGQGKCR
Trigger: GCGGCATTTCCCCTGGCCTGGGCTGTTTCCCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR CCA 72 bp TGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATaGACAGCATGGGATGGGGCATGTGGTCTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: WDPGPFGTCENG*TAWDGACGLSP
Trigger: AGGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
3UTR-3UTR CAA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGCTGCAGCAGCTGGTaGGGAGGGCAGTGTCATTTG +
Preference number: 3 (lower is better)
Translates to: MHIHIEQGCRAALTPEAARCSSW*GGQCHL
Trigger: CAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
3UTR-3UTR CAA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 3 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWTGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR CCA 72 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTA +
Preference number: 3 (lower is better)
Translates to: TTGWAILVSVRI*FGGFRRTRPRL
Trigger: TAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 3 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACATTCACCCTCTTGTTGTaGGGGTCGAAGGGCGACTTC +
Preference number: 3 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTFTLLL*GSKGDF
Trigger: GAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAA...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422262.6
3UTR CCA 72 bp GGATTAGAGACTGCCTTCCAGTCAGTGACCACAGGATaGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: GLETAFQSVTTG*AILVSVRIWFG
Trigger: CCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAGTCTCTAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 3 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 3 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLTGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR TCA 72 bp AGAATGGATGGACAGCATGGGATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCTTCACCCTCTTGTTGT +
Preference number: 3 (lower is better)
Translates to: RMDGQHGMGHVV*ALSRFPSPSCC
Trigger: ACAACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
3UTR CCA 72 bp GCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCCTTCCAGTCAGTGACC +
Preference number: 3 (lower is better)
Translates to: AQDTYRFAFWED*GGLETAFQSVT
Trigger: GGTCACTGACTGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 3 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR TCA 72 bp TCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGGTTTGCTTTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: SRSLERATSHGP*AQDTYRFAFWE
Trigger: CTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACGCACCTTCTAGAAGCTaGGAAAGGGCTACAAGCCAT +
Preference number: 3 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDAPSRS*ERATSH
Trigger: ATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGC...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 3 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCATTCCCTTCACCCTCTaGTTGTTGGGGTCGAAGGGC +
Preference number: 3 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVIPFTL*LLGSKG
Trigger: GCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAAT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
3UTR-3UTR CAA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 3 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR-3UTR CAA 90 bp TTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACGGAGGGCAGTGTCATTaGCTGAAGGACGTAGGACTT +
Preference number: 3 (lower is better)
Translates to: LVSLFLQKLKQFLAQSSHGGQCH*LKDVGL
Trigger: AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCC...GTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACAGGCCTGCGGCCCGCTaGTGCTCCAGGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDRPAAR*CSRASL
Trigger: GAGGGAGGCCCTGGAGCAGCAGCGGGCCGCAGGCCT...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCAGGGGGCTGTCGTCTaGCCGCAGGTCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTQGAVV*PQVRVP
Trigger: TGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCAGTGGGCCAGCTCCTaGCCACAGCCACCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTQWASS*PQPPPS
Trigger: GCTGGGTGGTGGCTGTGGGCAGGAGCTGGCCCACTG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCCACGTTGGCCGTGCTaGGCAGGGGCCGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCPRWPC*AGAGLG
Trigger: GCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCCACGGCCCCGCCCATaGCCAGGTAGTAACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTPRPRP*PGSNRP
Trigger: GGGACGGTTACTACCTGGCCATGGGCGGGGCCGTGG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGCTGGGCCTCGGGGATaGAACCATCCCGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDAGPRG*NHPGRS
Trigger: GGAGCGACCGGGATGGTTTCATCCCCGAGGCCCAGC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGCGCTGGACAGGTTaGATGGCCCCATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDLRWTG*MAPCPG
Trigger: CCCGGGGCATGGGGCCATGCAACCTGTCCAGCGCAG...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTCAGGCCTGCGGCCCGCTaGTGCTCCAGGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VEGRLQVSLGTIGHPHSLRPAAR*CSRASL
Trigger: GAGGGAGGCCCTGGAGCAGCAGCGGGCCGCAGGCCT...GAGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGGCTCAGTGAGGCCATaGGGGCTCCAGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDGSVRP*GLQASA
Trigger: CGCTGAGGCCTGGAGCCCCCATGGCCTCACTGAGCC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCACGGCCCCGCCCATaGCCAGGTAGTAACCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDPRPRP*PGSNRP
Trigger: GGGACGGTTACTACCTGGCCATGGGCGGGGCCGTGG...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACTGGGACCAGTTGTGCTaGGCCACGGCCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDWDQLC*ATAPPM
Trigger: CATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCA...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCGCCGGTTGGACGCGATaGAGAGGCCCCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTAGWTR*RGPHSG
Trigger: TCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGC...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCCACCAGCGGGACCTTaGCTCCAGCCATCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCPPAGP*LQPSGP
Trigger: TGGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCCACCACGTTGGCCGTaGTGGGCAGGGGCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWPPRWP*WAGAGL
Trigger: CAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATATGTGGGACCAGTTGTaGTGGGCCACGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDMWDQL*WATAPP
Trigger: GGGCGGGGCCGTGGCCCAGCACAACTGGTCCCACAT...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGGGCCGGCTTGGGCCTTaGGCCACCACCGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARGRLGP*ATTEVP
Trigger: GGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCC...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGCCACGTTGGCCGTGCTaGGCAGGGGCCGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QGKCRCSSWLGGQCHLLKPRWPC*AGAGLG
Trigger: GCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGG...CTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGGGCAGAAGCTGCCCTaGCGAGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDGQKLP*RGWYRC
Trigger: GCACCTGTACCACCCTCGCCAGGGCAGCTTCTGCCC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCGTACACGGTGGAGCCTaGGGGTCGGCTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTVHGGA*GSADIC
Trigger: GCAGATGTCAGCCGACCCCCAGGCTCCACCGTGTAC...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCCACGGCCCCGCCCATaGCCAGGTAGTAACCGTCCC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCPRPRP*PGSNRP
Trigger: GGGACGGTTACTACCTGGCCATGGGCGGGGCCGTGG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTTGGGACCAGTTGTGCTaGGCCACGGCCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCWDQLC*ATAPPM
Trigger: CATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCA...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCCTCGATGCGCTCGGTaGCGACATAGGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTPRCAR*RHRHGA
Trigger: TGCACCATGCCTATGTCGTCACCGAGCGCATCGAGG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTAGCCTGGGGGTCGGCTaGCATCTGCGGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCSLGVG*HLRRRA
Trigger: GGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCT...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGGCTGTGGGGCCAGCTaGGCTGGACAGGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWGCGAS*AGQVAW
Trigger: CCATGCAACCTGTCCAGCGCAGCTGGCCCCACAGCC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGGCTGTGGGGCCAGCTaGGCTGGACAGGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCGCGAS*AGQVAW
Trigger: CCATGCAACCTGTCCAGCGCAGCTGGCCCCACAGCC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGAGCAGGCCTGCCGTGTaGCAGGTGGTCCCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWSRPAV*QVVPEV
Trigger: GACCTCCGGGACCACCTGGCACACGGCAGGCCTGCT...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCCGGCCCACAGCACTTaGCCACACTCCTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTPAHST*PHSCTV
Trigger: AACTGTGCAGGAGTGTGGGCAAGTGCTGTGGGCCGG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGCCCCGGGTAGGGCTCTaGCGAGGGTGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGPRVGL*RGWAAA
Trigger: GGCTGCTGCCCACCCTCGCCAGAGCCCTACCCGGGG...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGGGCAGAAGCTGCCCTaGCGAGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCGQKLP*RGWYRC
Trigger: GCACCTGTACCACCCTCGCCAGGGCAGCTTCTGCCC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCAGCCATGCCGCTCCTaGAACACGCAGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTQPCRS*NTQPCP
Trigger: TGGACAAGGCTGCGTGTTCCAGGAGCGGCATGGCTG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTCGAGGACCGGAGCTaGGCCTCGGGGATGAAACCA +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDLEDRS*ASGMKP
Trigger: TGGTTTCATCCCCGAGGCCCAGCTCCGGTCCTCGAG...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCCAGAAACCGCAGGGTaGGGACGCGTCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWPETAG*GRVHSG
Trigger: GCCGCTGTGGACGCGTCCCCACCCTGCGGTTTCTGG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACCGGGCGCCCATGGATaGTCCAGTGGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAPGAHG*SSGPAP
Trigger: AGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGTGGGTGCCAGGCGGCTaGCAGTCAGGTCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWWVPGG*QSGHSR
Trigger: CCGAGAGTGACCTGACTGTCAGCCGCCTGGCACCCA...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTTGGGTGCCAGGCGGCTaGCAGTCAGGTCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: GRRATSGEPGHHRSPPFSWVPGG*QSGHSR
Trigger: CCGAGAGTGACCTGACTGTCAGCCGCCTGGCACCCA...AGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGCTGCCACAGCAGGCCTaGCGTGTGCCAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARLPQQA*RVPGGP
Trigger: GGGACCACCTGGCACACGGCAGGCCTGCTGTGGCAG...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCAGAGTCTTGGTCTCTaGCGGGCTCAGCACATGGGA +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTQSLGL*RAQHMG
Trigger: TCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCACTTGCCCACACTCCTaGACAGTTGACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTTCPHS*TVDHAG
Trigger: CCCTGCGTGGTCAACTGTGCAGGAGTGTGGGCAAGT...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGTCTCTCCTCATGTTaGGCCCGGCCAGCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDGLSSC*ARPAAH
Trigger: ATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACC...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGCGTCCAGCACCTCCTaGAAAATGGCTCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDASSTS*KMARLA
Trigger: AGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATCACTCTTCTCGGCTGTaGGGCCAGCTGCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDHSSRL*GQLRWT
Trigger: TGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTG...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCACTCTTCTCGGCTGTaGGGCCAGCTGCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWHSSRL*GQLRWT
Trigger: TGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTG...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGCTGCCGTGTGCCAGGTaGTCCCGGAGGTCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARLPCAR*SRRSAA
Trigger: AGCGGCTGACCTCCGGGACCACCTGGCACACGGCAG...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGCGGGTACAGAGTCTTaGTCTCTGCCGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDAGTES*SLPGSA
Trigger: TGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGTTCTCCGGGCGCCCATaGATGATCCAGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWFSGRP*MIQWAS
Trigger: GCTGGCCCACTGGATCATCCATGGGCGCCCGGAGAA...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATTTCTCCGGGCGCCCATaGATGATCCAGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDFSGRP*MIQWAS
Trigger: GCTGGCCCACTGGATCATCCATGGGCGCCCGGAGAA...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCTCGAGGACCGGAGCTaGGCCTCGGGGATGAAACCA +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWLEDRS*ASGMKP
Trigger: TGGTTTCATCCCCGAGGCCCAGCTCCGGTCCTCGAG...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTALSSL*VENGKA
Trigger: GGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGC...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDGRSSR*PPGQTW
Trigger: CCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGTCAGCCCTCCGGACATaGCCCACCACTTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWSALRT*PTTWPF
Trigger: GAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGA...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCCACCAGCGGGACCTTaGCTCCAGCCATCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGPPAGP*LQPSGP
Trigger: TGGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGG...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTCGCTTGTGGTCGGGCGTaGAGGATTCAGGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: VEGRLQVSLGTIGHPHSLACGRA*RIQGRR
Trigger: TCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGC...GAGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR TCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATAGCGGGGGTGGTCCGTaGGCGAGTGATGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDSGGGP*ASDGSA
Trigger: GGCGCTTCCATCACTCGCTCACGGACCACCCCCGCT...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGCTGGGCCTCGGGGATaGAACCATCCCGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGAGPRG*NHPGRS
Trigger: GGAGCGACCGGGATGGTTTCATCCCCGAGGCCCAGC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCTGGGCCCTGGATACTaGTCATACCCAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWLGPGY*SYPGPR
Trigger: CCGAGGACCTGGGTATGATCAGTATCCAGGGCCCAG...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCTTTGTCCTCCATGGTaGAGCACACCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWLCPPW*STPGAG
Trigger: GCCGGCGCCTGGTGTGCTTCACCATGGAGGACAAAG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATCTGCGCTGGACAGGTTaGATGGCCCCATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHLRWTG*MAPCPG
Trigger: CCCGGGGCATGGGGCCATGCAACCTGTCCAGCGCAG...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGGCACCGCCCCACTCATaGCCAGCTTGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARAPPHS*PAWPGG
Trigger: ACCACCTGGCCAAGCTGGGCATGAGTGGGGCGGTGC...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATCTGCCACAGCAGGCCTaGCGTGTGCCAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHLPQQA*RVPGGP
Trigger: GGGACCACCTGGCACACGGCAGGCCTGCTGTGGCAG...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTCACTGGGCCGCAGCTaGCACAGCAGGCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRSLGRS*HSRPAV
Trigger: CACGGCAGGCCTGCTGTGGCAGCTGCGGCCCAGTGA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGTCCTCGGGCAGAAGCTaGCCTGGCGAGGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWSSGRS*PGEGGT
Trigger: TGTACCACCCTCGCCAGGGCAGCTTCTGCCCGAGGA...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWVGSLP*IQPHQV
Trigger: TACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGAC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGATGTGGGACCAGTTGTaGTGGGCCACGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRMWDQL*WATAPP
Trigger: GGGCGGGGCCGTGGCCCAGCACAACTGGTCCCACAT...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDWDFWS*STVVMW
Trigger: CCACATCACCACCGTGCTGCAGGACCAGAAGTCCCA...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCTGAGCCCTGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: GTCENGWTAWDGACGLSPALMRP*LAPAAI
Trigger: GATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGC...AGGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGAGCCCCACAGCCCCATaGCCCTCCCTGGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWSPTAP*PSLAAA
Trigger: AGCAGCGGCCAGGGAGGGGCATGGGGCTGTGGGGCT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCTCTGGGCCAGCCCCTaGGGGAAGCGTCTTACACTC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWLWASP*GKRLTL
Trigger: GAGTGTAAGACGCTTCCCGCAGGGGCTGGCCCAGAG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAACGTGGTCCTCAGCCTaGCTCTTTGGCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGATWSSA*LFGPSP
Trigger: CGGGGAGGGGCCAAAGAGGCAGGCTGAGGACCACGT...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGAGCGAAACAGGGAGCTaGGGTGGTGTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWSETGS*GGVGVL
Trigger: CAGGACCCCCACACCACCCCAGCTCCCTGTTTCGCT...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGCTCAGTGAGGCCATaGGGGCTCCAGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDGSVRP*GLQASA
Trigger: CGCTGAGGCCTGGAGCCCCCATGGCCTCACTGAGCC...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCCCGGGTAGGGCTCTaGCGAGGGTGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPRVGL*RGWAAA
Trigger: GGCTGCTGCCCACCCTCGCCAGAGCCCTACCCGGGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGCCGGCTTGGGCCTTaGGCCACCACCGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTGRLGP*ATTEVP
Trigger: GGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGCTGCCGTGTGCCAGGTaGTCCCGGAGGTCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGLPCAR*SRRSAA
Trigger: AGCGGCTGACCTCCGGGACCACCTGGCACACGGCAG...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATTTGATCGTGTCGTGGTaGGGCGGGAAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDLIVSW*GGKAKV
Trigger: CACCTTCGCCTTCCCGCCCCACCACGACACGATCAA...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACTTCTTGATCGTGTCGTaGTGGGGCGGGAAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDFLIVS*WGGKAK
Trigger: CTTCGCCTTCCCGCCCCACCACGACACGATCAAGAA...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGTACACGGTGGAGCCTaGGGGTCGGCTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWVHGGA*GSADIC
Trigger: GCAGATGTCAGCCGACCCCCAGGCTCCACCGTGTAC...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTTCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTAC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCSVPPR*LSMHVY
Trigger: GTACACGTGCATGCTCAACCACCGTGGGGGCACCGA...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGCAGGGGGCTGTCGTCTaGCCGCAGGTCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGQGAVV*PQVRVP
Trigger: TGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTG...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDGRSSR*PPGQTW
Trigger: CCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCC...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWTWPTT*PFLQMA
Trigger: GGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGT...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRRATSGEPGHHRSPPFSGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...AGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR TCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATCCTTGCCCAGCGACATaGGCCTCTTGTACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDPCPAT*ASCTRP
Trigger: TGGACGAGTACAAGAGGCTCATGTCGCTGGGCAAGG...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAGCTTGTGGTCGGGCGTaGAGGATTCAGGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAACGRA*RIQGRR
Trigger: TCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGC...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGCTGGGCCTCGGGGATaGAACCATCCCGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFAAGPRG*NHPGRS
Trigger: GGAGCGACCGGGATGGTTTCATCCCCGAGGCCCAGC...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATTGGGTGCCAGGCGGCTaGCAGTCAGGTCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHWVPGG*QSGHSR
Trigger: CCGAGAGTGACCTGACTGTCAGCCGCCTGGCACCCA...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCACCACGTTGGCCGTaGTGGGCAGGGGCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPPRWP*WAGAGL
Trigger: CAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGCACCGCCCCACTCATaGCCAGCTTGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHAPPHS*PAWPGG
Trigger: ACCACCTGGCCAAGCTGGGCATGAGTGGGGCGGTGC...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGCAGGCCTGCCGTGTaGCAGGTGGTCCCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRSRPAV*QVVPEV
Trigger: GACCTCCGGGACCACCTGGCACACGGCAGGCCTGCT...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGTCACTGGGCCGCAGCTaGCACAGCAGGCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWSLGRS*HSRPAV
Trigger: CACGGCAGGCCTGCTGTGGCAGCTGCGGCCCAGTGA...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCCCTCGGAGCTCAGGTaGCTCCCCCATCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGPSELR*LPHQGL
Trigger: AAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGGG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTGGTCGCTCCCAGCCATaGCGCTCCTGGAACACGCAG +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGGRSQP*RSWNTQ
Trigger: CTGCGTGTTCCAGGAGCGGCATGGCTGGGAGCGACC...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGARLPAA*GRRSPR
Trigger: ACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGCAGCGGCGGCCCCTCTaGAGGCCAGGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWQRRPL*RPGTPS
Trigger: AGAAGGAGTGCCTGGCCTGCAGAGGGGCCGCCGCTG...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCAGCGGCGGCCCCTCTaGAGGCCAGGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRQRRPL*RPGTPS
Trigger: AGAAGGAGTGCCTGGCCTGCAGAGGGGCCGCCGCTG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGAGCCTCAGCGGCGGCCCCTCTaGAGGCCAGGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RFPSPSCCWGRRATSGEPQRRPL*RPGTPS
Trigger: AGAAGGAGTGCCTGGCCTGCAGAGGGGCCGCCGCTG...AGGCTCACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGCGTCCAGCACCTCCTaGAAAATGGCTCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWASSTS*KMARLA
Trigger: AGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGC...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGALMRP*LAPAAI
Trigger: GATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHALMRP*LAPAAI
Trigger: GATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGC...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTCGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VEGRLQVSLGTIGHPHSLDGAVP*VDEAVL
Trigger: AAGCACGGCCTCATCAACGCAGGGTACCGCGCCATC...GAGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGAGGCCTGCGGCCCGCTaGTGCTCCAGGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLRPAAR*CSRASL
Trigger: GAGGGAGGCCCTGGAGCAGCAGCGGGCCGCAGGCCT...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGGCCTCCCTGGGATCTaGCCCCATCAGACACCCCAC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGGLPGI*PHQTPH
Trigger: GTGGGGTGTCTGATGGGGGCAGATCCCAGGGAGGCC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAGCCCTCGGAGAGCCCTaGACTGAGTGCCCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAALGEP*TECPCV
Trigger: AACACACGGGCACTCAGTGCAGGGCTCTCCGAGGGC...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGGGCTCTGGCGAGGGTaGGCAGCAGCCACACGTAGG +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGGLWRG*AAATRR
Trigger: CCTACGTGTGGCTGCTGCCCACCCTCGCCAGAGCCC...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTGGGCTCTGGCGAGGGTaGGCAGCAGCCACACGTAGG +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGGLWRG*AAATRR
Trigger: CCTACGTGTGGCTGCTGCCCACCCTCGCCAGAGCCC...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTGCTGGACAGGTTGCATaGCCCCATGCCCCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGAGQVA*PHAPGR
Trigger: CCTACCCGGGGCATGGGGCCATGCAACCTGTCCAGC...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGACCACCCGCCGAGTGTaGGCCAGAAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGTTRRV*ARSSTS
Trigger: GGAGGTGGAGCTTCTGGCCCACACTCGGCGGGTGGT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGCGCCTTCAATGTGCTaGGTGAACACCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCAPSMC*VNTSQS
Trigger: GGACTGGGAGGTGTTCACCCAGCACATTGAAGGCGC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCGACGGAGTAGTTCTTaGCGTAGGACTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTRRSSS*RRTHGF
Trigger: GAAGCCATGAGTCCTACGCCAAGAACTACTCCGTCG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCELSMS*HWDFWS
Trigger: GGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCALSSL*VENGKA
Trigger: GGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACAAAGGACAGCCGCATaGCTCGGACCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAQRTAA*LGPGAL
Trigger: CAGGGCACCTGGTCCGAGCCATGCGGCTGTCCTTTG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTTCCTTCAGGGTCCGCTaGTATGGCACACTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCSFRVR*YGTLFS
Trigger: CGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGA...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCTTCAATGTGCTGGGTaGACACCTCCCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCLQCAG*TPPSPG
Trigger: ACCTGGACTGGGAGGTGTTCACCCAGCACATTGAAG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACACCGGGCGCCCATGGATaGTCCAGTGGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTPGAHG*SSGPAP
Trigger: AGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGG...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCGGGCGCCCATGGATaGTCCAGTGGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPGAHG*SSGPAP
Trigger: AGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGTGGTCCGTGAGCGAGTaGTGGAAGCGCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWWSVSE*WKRLMS
Trigger: TGACATCAGGCGCTTCCATCACTCGCTCACGGACCA...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATAGCGGGGGTGGTCCGTaGGCGAGTGATGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDSGGGP*ASDGSA
Trigger: GGCGCTTCCATCACTCGCTCACGGACCACCCCCGCT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAAGCCTGGGGGTCGGCTaGCATCTGCGGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFASLGVG*HLRRRA
Trigger: GGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCT...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCTGGGTGCCAGGCGGCTaGCAGTCAGGTCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRWVPGG*QSGHSR
Trigger: CCGAGAGTGACCTGACTGTCAGCCGCCTGGCACCCA...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACCTCGGAGCTGTCGATaGGCTGGCACTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAPRSCR*AGTGTS
Trigger: AGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACTGGGCCCTGGATACTaGTCATACCCAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGALGPGY*SYPGPR
Trigger: CCGAGGACCTGGGTATGATCAGTATCCAGGGCCCAG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGG +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWTSHGP*AQDTYR
Trigger: CCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGT...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACCTGAGCTAGGGCTGTaGTCACCCAACAGGGTGACG +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAPELGL*SPNRVT
Trigger: CGTCACCCTGTTGGGTGAGCACAGCCCTAGCTCAGG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGGGCCACCACCGAGGTaGCCTGTCCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLGPPPR*PVPPSG
Trigger: CCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCC...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTGCCACAGCAGGCCTaGCGTGTGCCAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLLPQQA*RVPGGP
Trigger: GGGACCACCTGGCACACGGCAGGCCTGCTGTGGCAG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGACTTGCCCACACTCCTaGACAGTTGACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWTCPHS*TVDHAG
Trigger: CCCTGCGTGGTCAACTGTGCAGGAGTGTGGGCAAGT...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTCAGGGGAAATGCCGCTaGAGCAGCTGGTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLQGKCR*SSWLGG
Trigger: CCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTCCAGGCCAGGGGAAATaGCGCTGCAGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLPGQGK*RCSSWL
Trigger: CAACCAGCTGCTGCAGCGGCATTTCCCCTGGCCTGG...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCCCTCGGAGCTCAGGTaGCTCCCCCATCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRPSELR*LPHQGL
Trigger: AAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGGG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACACAGTGGGCCAGCTCCTaGCCACAGCCACCACCCAGC +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTQWASS*PQPPPS
Trigger: GCTGGGTGGTGGCTGTGGGCAGGAGCTGGCCCACTG...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGGTCTCTCCTCATGTTaGGCCCGGCCAGCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGGLSSC*ARPAAH
Trigger: ATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGGGTCGCTCCCAGCCATaGCGCTCCTGGAACACGCAG +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWGRSQP*RSWNTQ
Trigger: CTGCGTGTTCCAGGAGCGGCATGGCTGGGAGCGACC...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGCGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRRLPAA*GRRSPR
Trigger: ACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACG...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTAGGAGGCCGCAGGGTTaGCTGGTGGGTCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGRRPQG*LVGLRA
Trigger: GGCTCTCAGACCCACCAGGCAACCCTGCGGCCTCCT...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGTGCCTTCACCTTCTTaGTTCCCAAGCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWVPSPS*FPSSGL
Trigger: CAGGCCACTGCTTGGGAAGCAAGAAGGTGAAGGCAC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGGCCGGCTTGGGCCTTaGGCCACCACCGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRGRLGP*ATTEVP
Trigger: GGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCC...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCACCACCTCCACGTCACTaGGCCGCAGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFAPPPRH*AAAATA
Trigger: TGCTGTGGCAGCTGCGGCCCAGTGACGTGGAGGTGG...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGGCCGGGCTCAGCACATaGGATTCCACACCATACGCC +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARAGLST*DSTPYA
Trigger: GGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGC...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGGCGGGTACAGAGTCTTaGTCTCTGCCGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARAGTES*SLPGSA
Trigger: TGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGC...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCTGCCCTGGCGAGGGTaGTACAGGTGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDLPWRG*YRCQRG
Trigger: ACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp AAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGGCAGAAGCTGCCCTaGCGAGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: KCRCSSWLGGQCHLLKDVGQKLP*RGWYRC
Trigger: GCACCTGTACCACCCTCGCCAGGGCAGCTTCTGCCC...TACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GGTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTTCGATGAGCTGGCACTaGGACTTCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRRATSGEPGHHRSPPFSSMSWH*DFWSCS
Trigger: GCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGA...AGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWRWSCR*RTQSQP
Trigger: GGGCTGACTTTGGGTTCGCCATCGACAAGACCATCG...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACATGGGATGGGGCATGTaGTCTGAGCCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDMGWGM*SEPSVD
Trigger: ATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGAAGGGCTACAAGCCATaGTCCCTGAGCCCAAGACAC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWKGYKP*SLSPRH
Trigger: GTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATGCCAGGGCTGCTCCCTaGAGCCACGGCAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDARAAP*SHGNPR
Trigger: CCTGGGATTGCCGTGGCTCCAGGGAGCAGCCCTGGC...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp CCAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAACCTTGCCCAGCGACATaGGCCTCTTGTACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PGEMPLQQLVGRAVSFAEPCPAT*ASCTRP
Trigger: TGGACGAGTACAAGAGGCTCATGTCGCTGGGCAAGG...TTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCCACCAGCGGGACCTTaGCTCCAGCCATCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVPPAGP*LQPSGP
Trigger: TGGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTCCTCGATGCGCTCGGTaGCGACATAGGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLPRCAR*RHRHGA
Trigger: TGCACCATGCCTATGTCGTCACCGAGCGCATCGAGG...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGGCACGGGGACCCTGTTaGTGGCGCCTTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRARGPC*WRLQCA
Trigger: AGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGC...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGGTCCGTGAGCGAGTaGTGGAAGCGCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAWSVSE*WKRLMS
Trigger: TGACATCAGGCGCTTCCATCACTCGCTCACGGACCA...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCCTGCAGCACGGTGGTaGTGTGGGACCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGPAARW*CGTSCA
Trigger: AGCACAACTGGTCCCACATCACCACCGTGCTGCAGG...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGCCTGCAGCACGGTGGTaGTGTGGGACCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRPAARW*CGTSCA
Trigger: AGCACAACTGGTCCCACATCACCACCGTGCTGCAGG...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGCCTCGGAGCTGTCGATaGGCTGGCACTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRPRSCR*AGTGTS
Trigger: AGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGG...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCCTCGGAGCTGTCGATaGGCTGGCACTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGPRSCR*AGTGTS
Trigger: AGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGTCCTGGACGTGCAAGTaGATGGGAGAAAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWSWTCK*MGEKRS
Trigger: GCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGA...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGGCCACCACCGAGGTaGCCTGTCCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGPPPR*PVPPSG
Trigger: CCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATTACTCGTCCAGGCGCTaGCGGTTGGACGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHYSSRR*RLDAMK
Trigger: CTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTA...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCTCCTCGGGCAGAAGCTaGCCTGGCGAGGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: MHIHIEQGCRAALTPEAASSGRS*PGEGGT
Trigger: TGTACCACCCTCGCCAGGGCAGCTTCTGCCCGAGGA...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGCCGTCCACACACGAATaGCGGTCACTGGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARPSTHE*RSLGSS
Trigger: AGAACTGCCCAGTGACCGGCATTCGTGTGTGGACGG...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGACTTGCCCACACTCCTaGACAGTTGACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGKCRCSSWLGGQCHLLKTCPHS*TVDHAG
Trigger: CCCTGCGTGGTCAACTGTGCAGGAGTGTGGGCAAGT...CTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGCACATAGAACAGGGCTaGAGGGCTGCCCTAACCCCA +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARHIEQG*RAALTP
Trigger: TGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTG...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCCTCGGAGCTCAGGTaGCTCCCCCATCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPSELR*LPHQGL
Trigger: AAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGACCCAGCATCATTCCTaGGCTGTTGAAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWTQHHS*AVEATA
Trigger: GGCTGTGGCTTCAACAGCGCAGGAATGATGCTGGGT...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSRLPAA*GRRSPR
Trigger: ACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACG...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTCAGCGGCGGCCCCTCTaGAGGCCAGGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIQRRPL*RPGTPS
Trigger: AGAAGGAGTGCCTGGCCTGCAGAGGGGCCGCCGCTG...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDVGSLP*IQPHQV
Trigger: TACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGAC...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAATGTGGGACCAGTTGTaGTGGGCCACGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTMWDQL*WATAPP
Trigger: GGGCGGGGCCGTGGCCCAGCACAACTGGTCCCACAT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGDAFGM*SSQPSS
Trigger: GGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGDGAVP*VDEAVL
Trigger: AAGCACGGCCTCATCAACGCAGGGTACCGCGCCATC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCACGTTGGCCGTGCTaGGCAGGGGCCGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEPRWPC*AGAGLG
Trigger: GCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGAGGTGGTACAGGGTCTaGCAGCCCAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRRWYRV*QPKLPP
Trigger: TGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCT...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCACCTCCACGTCACTaGGCCGCAGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPPPRH*AAAATA
Trigger: TGCTGTGGCAGCTGCGGCCCAGTGACGTGGAGGTGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATACCACCCGCCGAGTGTaGGCCAGAAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDTTRRV*ARSSTS
Trigger: GGAGGTGGAGCTTCTGGCCCACACTCGGCGGGTGGT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACTGCCCTGGCGAGGGTaGTACAGGTGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTLPWRG*YRCQRG
Trigger: ACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATACGAATGCCGGTCACTaGGCAGTTCTCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDTNAGH*AVLNDL
Trigger: CAGGTCATTGAGAACTGCCCAGTGACCGGCATTCGT...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GGTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTCCCAAAAGATGGGGTTaGCCTCATAGCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: GRRATSGEPGHHRSPPFSPKRWG*PHSHPQ
Trigger: CTGTGGGTGGCTATGAGGCCAACCCCATCTTTTGGG...AGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTTGCCGCTGCAGCAGCTaGTTGGGAGGGCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLCRCSS*LGGQCH
Trigger: ATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCA...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCTGAGCCCTCCCATCAGGGGCTTGTaGTCGGGCGTGAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: GTCENGWTAWDGACGLSPPIRGL*SGVKDS
Trigger: TGAATCCTTCACGCCCGACCACAAGCCCCTGATGGG...AGGGCTCAGACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGCCATGGATGATCCAGTaGGCCAGCTCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGPWMIQ*ASSCPQ
Trigger: CTGTGGGCAGGAGCTGGCCCACTGGATCATCCATGG...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTTGATCGTGTCGTGGTaGGGCGGGAAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRLIVSW*GGKAKV
Trigger: CACCTTCGCCTTCCCGCCCCACCACGACACGATCAA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGGTACACGGTGGAGCCTaGGGGTCGGCTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWVHGGA*GSADIC
Trigger: GCAGATGTCAGCCGACCCCCAGGCTCCACCGTGTAC...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTAC +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRSVPPR*LSMHVY
Trigger: GTACACGTGCATGCTCAACCACCGTGGGGGCACCGA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGTGGGACCAGTTGTGCTaGGCCACGGCCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLWDQLC*ATAPPM
Trigger: CATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCA...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGAGCACGGTGGTGATGTaGGACCAGTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGSTVVM*DQLCWA
Trigger: GGCCCAGCACAACTGGTCCCACATCACCACCGTGCT...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCGGCTGGCTGGGCCCTaGATACTGATCATACCCAGG +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGRLAGP*ILIIPR
Trigger: CCTGGGTATGATCAGTATCCAGGGCCCAGCCAGCCG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGCAAAGGACAGCCGCATaGCTCGGACCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWQRTAA*LGPGAL
Trigger: CAGGGCACCTGGTCCGAGCCATGCGGCTGTCCTTTG...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGAGCCTCAAAGGACAGCCGCATaGCTCGGACCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RFPSPSCCWGRRATSGEPQRTAA*LGPGAL
Trigger: CAGGGCACCTGGTCCGAGCCATGCGGCTGTCCTTTG...AGGCTCACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGACAGGGGGCTGTCGTCTaGCCGCAGGTCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRQGAVV*PQVRVP
Trigger: TGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTG...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHTWPTT*PFLQMA
Trigger: GGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGT...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTAGACCGGCCCACCGCTaGGGTCATGGATGTAACCGT +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGRPAHR*GHGCNR
Trigger: ACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTATGGGATGGGGCATGTaGTCTGAGCCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCMGWGM*SEPSVD
Trigger: ATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATAATGGATGGACAGCATaGGATGGGGCATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDNGWTA*DGACGL
Trigger: CAGACCACATGCCCCATCCCATGCTGTCCATCCATT...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTTTCTGCCACTGCCTTaGCCTCCCTGGGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRFLPLP*PPWDLP
Trigger: GGGCAGATCCCAGGGAGGCCAAGGCAGTGGCAGAAA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTGGCCCTAAGAGTGCTTaGCCCAGCAGAGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGGPKSA*PSRGAF
Trigger: GAAGGCACCTCTGCTGGGCCAAGCACTCTTAGGGCC...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439388.6
CDS-3UTR TCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGTGGATGGAACCATGCTaGGTCTCCACACCCGCGACC +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGWMEPC*VSTPAT
Trigger: GGTCGCGGGTGTGGAGACTCAGCATGGTTCCATCCA...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTACACTCCTGCACAGTTaGCCACGCAGGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGTLLHS*PRRVSG
Trigger: TCCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATACACTCCTGCACAGTTaGCCACGCAGGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDTLLHS*PRRVSG
Trigger: TCCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGT...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGCACGGGGACCCTGTTaGTGGCGCCTTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSARGPC*WRLQCA
Trigger: AGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATTGGTCCGTGAGCGAGTaGTGGAAGCGCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHWSVSE*WKRLMS
Trigger: TGACATCAGGCGCTTCCATCACTCGCTCACGGACCA...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTAGCCTGGGGGTCGGCTaGCATCTGCGGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVSLGVG*HLRRRA
Trigger: GGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCT...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAGCCTGGGGGTCGGCTaGCATCTGCGGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTSLGVG*HLRRRA
Trigger: GGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCTGCCTTCCAGTCAGTaGCCACAGGATGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGLPSSQ*PQDGPS
Trigger: AGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGGCGGCTCCTCCATGGTaGAGCACACCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEAAPPW*STPGAG
Trigger: GCCGGCGCCTGGTGTGCTTCACCATGGAGGAGCCGC...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCTACTCGTCCAGGCGCTaGCGGTTGGACGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: MHIHIEQGCRAALTPEAAYSSRR*RLDAMK
Trigger: CTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTA...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATACTTGCCCACACTCCTaGACAGTTGACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDTCPHS*TVDHAG
Trigger: CCCTGCGTGGTCAACTGTGCAGGAGTGTGGGCAAGT...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGGCAAAGCCCTCCAGCTaGCCTGGGTCTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: HIHIEQGCRAALTPEAARAKPSS*PGSVFD
Trigger: GTCAAATACAGACCCAGGGCAGCTGGAGGGCTTTGC...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGGTCGCTCCCAGCCATaGCGCTCCTGGAACACGCAG +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIGRSQP*RSWNTQ
Trigger: CTGCGTGTTCCAGGAGCGGCATGGCTGGGAGCGACC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSEGVLV*QQPAVG
Trigger: GCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGWDFWS*STVVMW
Trigger: CCACATCACCACCGTGCTGCAGGACCAGAAGTCCCA...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGCGTCCAGCACCTCCTaGAAAATGGCTCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSASSTS*KMARLA
Trigger: AGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGTGRPR*SGLRPA
Trigger: TGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGT...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGTGRPR*SGLRPA
Trigger: TGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGT...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATATGGCTCGGACCAGGTaGCCTGCGGCTCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDMARTR*PAALSS
Trigger: GCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCAT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGDAFGM*SSQPSS
Trigger: GGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTC...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSDAFGM*SSQPSS
Trigger: GGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIALMRP*LAPAAI
Trigger: GATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGGGTGGATTAGAGACTaGCTTCCAGTCAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWGWIRD*LPVSDH
Trigger: GTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCC...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAAGAGTCCAGCTTTTCTaGCACTGCCTTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: DPGPFGTCENGWTAWDGARVQLF*HCLGLP
Trigger: AGGGAGGCCAAGGCAGTGGCAGAAAAGCTGGACTCT...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGACCTCAGCCAGGGCTaGTCCCTGGAGCCACGGCAA +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLDLSQG*SLEPRQ
Trigger: TTGCCGTGGCTCCAGGGAGCAGCCCTGGCTGAGGTC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGTGGTGTGGGGGTCCTaGGGCAGAGGACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLVVWGS*GRGPPL
Trigger: AAGAGGAGGTCCTCTGCCCCAGGACCCCCACACCAC...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGTGGGGCCAGCTGCGCTaGACAGGTTGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLWGQLR*TGCMAP
Trigger: TGGGGCCATGCAACCTGTCCAGCGCAGCTGGCCCCA...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTTGGGGCCAGCTGCGCTaGACAGGTTGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIWGQLR*TGCMAP
Trigger: TGGGGCCATGCAACCTGTCCAGCGCAGCTGGCCCCA...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGCACTCATGCCCAGCTTaGCCAGGTGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRHSCPA*PGGTGS
Trigger: AGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTG...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGCCCATCAGGGGCTTGTaGTCGGGCGTGAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGPIRGL*SGVKDS
Trigger: TGAATCCTTCACGCCCGACCACAAGCCCCTGATGGG...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGCCATGGATGATCCAGTaGGCCAGCTCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGPWMIQ*ASSCPQ
Trigger: CTGTGGGCAGGAGCTGGCCCACTGGATCATCCATGG...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGTTGATCGTGTCGTGGTaGGGCGGGAAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGLIVSW*GGKAKV
Trigger: CACCTTCGCCTTCCCGCCCCACCACGACACGATCAA...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTCTTGATCGTGTCGTaGTGGGGCGGGAAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGFLIVS*WGGKAK
Trigger: CTTCGCCTTCCCGCCCCACCACGACACGATCAAGAA...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGTCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTAC +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGSVPPR*LSMHVY
Trigger: GTACACGTGCATGCTCAACCACCGTGGGGGCACCGA...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACTGGGACCAGTTGTGCTaGGCCACGGCCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDWDQLC*ATAPPM
Trigger: CATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCA...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTCGATGAGCTGGCACTaGGACTTCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRSMSWH*DFWSCS
Trigger: GCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGELSMS*HWDFWS
Trigger: GGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCACGGCTGGCTGGGCCCTaGATACTGATCATACCCAGG +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFARLAGP*ILIIPR
Trigger: CCTGGGTATGATCAGTATCCAGGGCCCAGCCAGCCG...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSTWPTT*PFLQMA
Trigger: GGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGT...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGTWPTT*PFLQMA
Trigger: GGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGT...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGCTCACCCAACAGGGTaGCGAATGAGCTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGAHPTG*RMSSRG
Trigger: CCCTCTTGAGCTCATTCGTCACCCTGTTGGGTGAGC...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR TCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATTCCTTCAGGGTCCGCTaGTATGGCACACTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDSFRVR*YGTLFS
Trigger: CGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGA...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGCCTTGCCCAGCGACATaGGCCTCTTGTACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGPCPAT*ASCTRP
Trigger: TGGACGAGTACAAGAGGCTCATGTCGCTGGGCAAGG...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGTGGATGGAACCATGCTaGGTCTCCACACCCGCGACC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLWMEPC*VSTPAT
Trigger: GGTCGCGGGTGTGGAGACTCAGCATGGTTCCATCCA...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCTCGATGCGCTCGGTaGCGACATAGGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPRCAR*RHRHGA
Trigger: TGCACCATGCCTATGTCGTCACCGAGCGCATCGAGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCGCAGACCGTGGACTTaGTTCCTGTCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGRRPWT*FLSSPA
Trigger: TGCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTCTGGGCCCTGGATACTaGTCATACCCAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSRFPSPSCCWGRRATSGLGPGY*SYPGPR
Trigger: CCGAGGACCTGGGTATGATCAGTATCCAGGGCCCAG...ACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCTACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR TCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTCTGCCTTCCAGTCAGTaGCCACAGGATGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGLPSSQ*PQDGPS
Trigger: AGATGGCCCATCCTGTGGTCACTGACTGGAAGGCAG...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTCCTCGGGCAGAAGCTaGCCTGGCGAGGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVSSGRS*PGEGGT
Trigger: TGTACCACCCTCGCCAGGGCAGCTTCTGCCCGAGGA...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CTCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTCCGGCCCACAGCACTTaGCCACACTCCTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: LSRFPSPSCCWGRRATSGPAHST*PHSCTV
Trigger: AACTGTGCAGGAGTGTGGGCAAGTGCTGTGGGCCGG...ACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCTACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACACCGGCCCACAGCACTTaGCCACACTCCTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTPAHST*PHSCTV
Trigger: AACTGTGCAGGAGTGTGGGCAAGTGCTGTGGGCCGG...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGATGGCGCCTTCAATGTaGTGGGTGAACACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGMAPSM*WVNTSQ
Trigger: CTGGGAGGTGTTCACCCAGCACATTGAAGGCGCCAT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATACCCAGCATCATTCCTaGGCTGTTGAAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHTQHHS*AVEATA
Trigger: GGCTGTGGCTTCAACAGCGCAGGAATGATGCTGGGT...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGTCTCTCCTCATGTTaGGCCCGGCCAGCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGLSSC*ARPAAH
Trigger: ATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTRLPAA*GRRSPR
Trigger: ACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLEGVLV*QQPAVG
Trigger: GCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTC...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSWDFWS*STVVMW
Trigger: CCACATCACCACCGTGCTGCAGGACCAGAAGTCCCA...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGCGTCCAGCACCTCCTaGAAAATGGCTCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTASSTS*KMARLA
Trigger: AGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTATGGCTCGGACCAGGTaGCCTGCGGCTCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVMARTR*PAALSS
Trigger: GCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCAT...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTDGAVP*VDEAVL
Trigger: AAGCACGGCCTCATCAACGCAGGGTACCGCGCCATC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGTCTTGTCAGCTGCAGTaGCCCTCGGCCCTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSSCQLQ*PSALRV
Trigger: CACTCTTAGGGCCGAGGGGCACTGCAGCTGACAAGA...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGTTCTCCCAGGAGTCCTaGACGTGCAAGTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGFSQES*TCKCMG
Trigger: TCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAA...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGAGGACCTCCTCTTTaGATGGTGTGGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGRGPPL*MVWLAQ
Trigger: CTGGGCAAGCCACACCATCCAAAGAGGAGGTCCTCT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGCAGGGTCCGCTGATATaGCACACTCTTCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRQGPLI*HTLLGC
Trigger: ACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTG...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAAGGTGGTACAGGGTCTaGCAGCCCAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTRWYRV*QPKLPP
Trigger: TGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCT...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATGCCGGGCTCAGCACATaGGATTCCACACCATACGCC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDAGLST*DSTPYA
Trigger: GGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGC...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGCCGGGCTCAGCACATaGGATTCCACACCATACGCC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLAGLST*DSTPYA
Trigger: GGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGC...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCAGCGGGGTCCATaGTACCGTCGTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVCQRGP*YRRAAH
Trigger: ATGTGCCGCACGACGGTACCATGGACCCCGCTGGCA...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTCGCAGGGTGTCTGGATaGAACCATGCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLRRVSG*NHAESP
Trigger: TGGAGACTCAGCATGGTTCCATCCAGACACCCTGCG...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGCGCCTTCAATGTGCTaGGTGAACACCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRAPSMC*VNTSQS
Trigger: GGACTGGGAGGTGTTCACCCAGCACATTGAAGGCGC...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCCATGGATGATCCAGTaGGCCAGCTCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDPWMIQ*ASSCPQ
Trigger: CTGTGGGCAGGAGCTGGCCCACTGGATCATCCATGG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACTCGAGGACCGGAGCTaGGCCTCGGGGATGAAACCA +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTLEDRS*ASGMKP
Trigger: TGGTTTCATCCCCGAGGCCCAGCTCCGGTCCTCGAG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGTCGATGAGCTGGCACTaGGACTTCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGSMSWH*DFWSCS
Trigger: GCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGA...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTCAGTAGCTTGTGGGTaGAGAACGGGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRSVACG*RTGRPR
Trigger: ACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTCAGTAGCTTGTGGGTaGAGAACGGGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGSVACG*RTGRPR
Trigger: ACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGA...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRALSSL*VENGKA
Trigger: GGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGC...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGALSSL*VENGKA
Trigger: GGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGC...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGRWSCR*RTQSQP
Trigger: GGGCTGACTTTGGGTTCGCCATCGACAAGACCATCG...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGAGACCGGCCCACCGCTaGGGTCATGGATGTAACCGT +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLRPAHR*GHGCNR
Trigger: ACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGAAGGGCTACAAGCCATaGTCCCTGAGCCCAAGACAC +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGKGYKP*SLSPRH
Trigger: GTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAAGGGCTACAAGCCATaGTCCCTGAGCCCAAGACAC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGKGYKP*SLSPRH
Trigger: GTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAAGCAGTAGAGAAAGCTaGGGCCCCAGAAACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFASSRES*GPRNRR
Trigger: CCTGCGGTTTCTGGGGCCCCAGCTTTCTCTACTGCT...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGGATGGAACCATGCTaGGTCTCCACACCCGCGACC +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVWMEPC*VSTPAT
Trigger: GGTCGCGGGTGTGGAGACTCAGCATGGTTCCATCCA...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGACACTCCTGCACAGTTaGCCACGCAGGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLTLLHS*PRRVSG
Trigger: TCCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGCCTCGATGCGCTCGGTaGCGACATAGGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLPRCAR*RHRHGA
Trigger: TGCACCATGCCTATGTCGTCACCGAGCGCATCGAGG...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCTTCAATGTGCTGGGTaGACACCTCCCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSLQCAG*TPPSPG
Trigger: ACCTGGACTGGGAGGTGTTCACCCAGCACATTGAAG...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGCTTGTGGTCGGGCGTaGAGGATTCAGGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRACGRA*RIQGRR
Trigger: TCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGC...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACCTGCAGCACGGTGGTaGTGTGGGACCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTPAARW*CGTSCA
Trigger: AGCACAACTGGTCCCACATCACCACCGTGCTGCAGG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCCTGCAGCACGGTGGTaGTGTGGGACCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVPAARW*CGTSCA
Trigger: AGCACAACTGGTCCCACATCACCACCGTGCTGCAGG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTCCTCGGAGCTGTCGATaGGCTGGCACTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIPRSCR*AGTGTS
Trigger: AGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGG...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGG +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSTSHGP*AQDTYR
Trigger: CCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGT...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGTTCTCAATGACCTGTaGTCCTCGGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KCRCSSWLGGQCHLLKDVVLNDL*SSGRSC
Trigger: GCAGCTTCTGCCCGAGGAGCACAGGTCATTGAGAAC...TACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGGTTCTCAATGACCTGTaGTCCTCGGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWVLNDL*SSGRSC
Trigger: GCAGCTTCTGCCCGAGGAGCACAGGTCATTGAGAAC...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAATGGCGCCTTCAATGTaGTGGGTGAACACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFAMAPSM*WVNTSQ
Trigger: CTGGGAGGTGTTCACCCAGCACATTGAAGGCGCCAT...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ATGGGATGGGGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTCCAAGGAGTTCCTCGTaGAGCGGGTCTCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: MGWGMWSEPSVDSLHPLVPRSSS*SGSLLM
Trigger: CATGAGGAGAGACCCGCTGCACGAGGAACTCCTTGG...AACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCAAGGAGTTCCTCGTaGAGCGGGTCTCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPRSSS*SGSLLM
Trigger: CATGAGGAGAGACCCGCTGCACGAGGAACTCCTTGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLEGVLV*QQPAVG
Trigger: GCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVEGVLV*QQPAVG
Trigger: GCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVTGRPR*SGLRPA
Trigger: TGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGT...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLDAFGM*SSQPSS
Trigger: GGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTC...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGGACGTGCAAGTGCATaGGAGAAAAACGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGGRASA*EKNAAV
Trigger: GACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGCGGGTACAGAGTCTTaGTCTCTGCCGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTAGTES*SLPGSA
Trigger: TGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGC...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATACGAATGCCGGTCACTaGGCAGTTCTCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHTNAGH*AVLNDL
Trigger: CAGGTCATTGAGAACTGCCCAGTGACCGGCATTCGT...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCGCAGGGTGTCTGGATaGAACCATGCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRRRVSG*NHAESP
Trigger: TGGAGACTCAGCATGGTTCCATCCAGACACCCTGCG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGCATGATCACGGACATTaGGCATGTTCTGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWHDHGH*ACSESP
Trigger: AGGGGATTCAGAACATGCCCAATGTCCGTGATCATG...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTAATGGCTCGGCTGGCTaGGCCCTGGATACTGATCAT +
Preference number: 4 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGNGSAG*ALDTDH
Trigger: ATGATCAGTATCCAGGGCCCAGCCAGCCGAGCCATT...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAGGGGGCTGTCGTCTaGCCGCAGGTCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLQGAVV*PQVRVP
Trigger: TGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTG...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIGRSSR*PPGQTW
Trigger: CCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGACCGGCCCACCGCTaGGGTCATGGATGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIRPAHR*GHGCNR
Trigger: ACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCT...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGTCACCCTCTTGTTGTTaGGGTCGAAGGGCGACTTCA +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGSPSCC*GRRATS
Trigger: TGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGA...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTTCACCCTCTTGTTGTTaGGGTCGAAGGGCGACTTCA +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGSPSCC*GRRATS
Trigger: TGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGA...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTATGGGATGGGGCATGTaGTCTGAGCCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GPFGTCENGWTAWDGACGMGWGM*SEPSVD
Trigger: ATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGATGGGATGGGGCATGTaGTCTGAGCCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRMGWGM*SEPSVD
Trigger: ATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAATGGATGGACAGCATaGGATGGGGCATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGNGWTA*DGACGL
Trigger: CAGACCACATGCCCCATCCCATGCTGTCCATCCATT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGAFWED*GGLETA
Trigger: GGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCAGTGCCCGTGTGTTGTaGACGCGGGCAGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVSARVL*TRAGGP
Trigger: GGGGCCCCCTGCCCGCGTCCACAACACACGGGCACT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGAGCTGCCTCCACCAATaGCCACCACGTTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPESCLHQ*PPRWPC
Trigger: GCACGGCCAACGTGGTGGTCATTGGTGGAGGCAGCT...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACGCACGGGGACCCTGTTaGTGGCGCCTTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDARGPC*WRLQCA
Trigger: AGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGC...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTAAGCGGGGGTGGTCCGTaGGCGAGTGATGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLSGGGP*ASDGSA
Trigger: GGCGCTTCCATCACTCGCTCACGGACCACCCCCGCT...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGG +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDTSHGP*AQDTYR
Trigger: CCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATCAGGAGTCCTGGACGTaGAAGTGCATGGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDQESWT*KCMGEK
Trigger: TTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTG...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAATGGCGCCTTCAATGTaGTGGGTGAACACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTMAPSM*WVNTSQ
Trigger: CTGGGAGGTGTTCACCCAGCACATTGAAGGCGCCAT...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRTGRPR*SGLRPA
Trigger: TGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGATGGCTCGGACCAGGTaGCCTGCGGCTCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEMARTR*PAALSS
Trigger: GCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCAT...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGCAAGGAAGGAGTGTaGCCCAAGTTCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGKEGV*PKFSQE
Trigger: CTCCTGGGAGAACTTGGGCCACACTCCTTCCTTGCC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACACAGGGTCCGCTGATATaGCACACTCTTCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTQGPLI*HTLLGC
Trigger: ACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTG...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCACGAATGCCGGTCACTaGGCAGTTCTCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: MHIHIEQGCRAALTPEAATNAGH*AVLNDL
Trigger: CAGGTCATTGAGAACTGCCCAGTGACCGGCATTCGT...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCCAAAAGATGGGGTTaGCCTCATAGCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPKRWG*PHSHPQ
Trigger: CTGTGGGTGGCTATGAGGCCAACCCCATCTTTTGGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGCGCCTTCAATGTGCTaGGTGAACACCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIAPSMC*VNTSQS
Trigger: GGACTGGGAGGTGTTCACCCAGCACATTGAAGGCGC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGCCCATCAGGGGCTTGTaGTCGGGCGTGAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLPIRGL*SGVKDS
Trigger: TGAATCCTTCACGCCCGACCACAAGCCCCTGATGGG...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGCGACGGAGTAGTTCTTaGCGTAGGACTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGRRSSS*RRTHGF
Trigger: GAAGCCATGAGTCCTACGCCAAGAACTACTCCGTCG...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACCAGCCATGCCGCTCCTaGAACACGCAGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDQPCRS*NTQPCP
Trigger: TGGACAAGGCTGCGTGTTCCAGGAGCGGCATGGCTG...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTTTCTTGATCGTGTCGTaGTGGGGCGGGAAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIFLIVS*WGGKAK
Trigger: CTTCGCCTTCCCGCCCCACCACGACACGATCAAGAA...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGATCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTAC +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRSVPPR*LSMHVY
Trigger: GTACACGTGCATGCTCAACCACCGTGGGGGCACCGA...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTTCGATGAGCTGGCACTaGGACTTCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWISMSWH*DFWSCS
Trigger: GCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGA...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGACACGCAGGACGCCTTTaGAATGTGCAGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRHAGRL*NVQLPA
Trigger: GGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTG...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRGRSSR*PPGQTW
Trigger: CCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCC...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGTCAGCCCTCCGGACATaGCCCACCACTTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPESALRT*PTTWPF
Trigger: GAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGA...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDRWSCR*RTQSQP
Trigger: GGGCTGACTTTGGGTTCGCCATCGACAAGACCATCG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCTGTAACCGTAGGCGATaGTCTTGTCGATGGCGAACC +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRCNRRR*SCRWRT
Trigger: GGTTCGCCATCGACAAGACCATCGCCTACGGTTACA...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACAGACCGGCCCACCGCTaGGGTCATGGATGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDRPAHR*GHGCNR
Trigger: ACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCT...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGATGGACAGCATGGGATaGGGCATGTGGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLMDSMG*GMWSEP
Trigger: GGGCTCAGACCACATGCCCCATCCCATGCTGTCCAT...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGGGAGGGCACAAGTTCTaGCTGGGTCCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEGGHKF*LGPGSW
Trigger: CCAGGACCCTGGACCCAGCCAGAACTTGTGCCCTCC...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCACTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFALGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSLGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ATGGGATGGGGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTAAGGGCTACAAGCCATaGTCCCTGAGCCCAAGACAC +
Preference number: 4 (lower is better)
Translates to: MGWGMWSEPSVDSLHPLVKGYKP*SLSPRH
Trigger: GTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT...AACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAACGACAGGGAGAGGTaGTTACCCAGGACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTNDRER*LPRTSA
Trigger: GGCTGAGGTCCTGGGTAACCACCTCTCCCTGTCGTT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGTGGATGCACCCAAGGTaGGGAACGACAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLWMHPR*GTTGRG
Trigger: ACCTCTCCCTGTCGTTCCCCACCTTGGGTGCATCCA...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCTCGTACTCGAGGACCTaGGAAGAAAAGACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRSYSRT*EEKTWS
Trigger: GGACCACGTCTTTTCTTCCCAGGTCCTCGAGTACGA...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGCCACCAGCGGGACCTTaGCTCCAGCCATCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVPPAGP*LQPSGP
Trigger: TGGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGG...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCTTCAATGTGCTGGGTaGACACCTCCCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVLQCAG*TPPSPG
Trigger: ACCTGGACTGGGAGGTGTTCACCCAGCACATTGAAG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCTGGGCCCTGGATACTaGTCATACCCAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPELGPGY*SYPGPR
Trigger: CCGAGGACCTGGGTATGATCAGTATCCAGGGCCCAG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLMGHVV*ALSRFP
Trigger: AGGGAATCTACTGAGGGCTCAGACCACATGCCCCAT...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIMGHVV*ALSRFP
Trigger: AGGGAATCTACTGAGGGCTCAGACCACATGCCCCAT...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGACAAGCCATGGTCCCTaGGCCCAAGACACTTACAGG +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLTSHGP*AQDTYR
Trigger: CCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGT...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCGTTGCCTGGTGGGTCTaGGAGCCCAGCCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAVAWWV*EPSQGP
Trigger: TGGGCCCTGGCTGGGCTCTCAGACCCACCAGGCAAC...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGCCACCACGTTGGCCGTaGTGGGCAGGGGCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQPPRWP*WAGAGL
Trigger: CAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGG...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGCACCGCCCCACTCATaGCCAGCTTGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVAPPHS*PAWPGG
Trigger: ACCACCTGGCCAAGCTGGGCATGAGTGGGGCGGTGC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGTCCATGGTACCGTCGTaGGGCACATACAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPESMVPS*GTYRVP
Trigger: CGGGACCCTGTATGTGCCGCACGACGGTACCATGGA...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGTTCTCAATGACCTGTaGTCCTCGGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLVLNDL*SSGRSC
Trigger: GCAGCTTCTGCCCGAGGAGCACAGGTCATTGAGAAC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEVGSLP*IQPHQV
Trigger: TACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGAC...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGTGGATTAGAGACTaGCTTCCAGTCAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTGWIRD*LPVSDH
Trigger: GTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp ATGGGATGGGGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTGGGTGGATTAGAGACTaGCTTCCAGTCAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: MGWGMWSEPSVDSLHPLVGWIRD*LPVSDH
Trigger: GTGGTCACTGACTGGAAGGCAGTCTCTAATCCACCC...AACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR GCA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGACACTTACAGGTTTaGTTTCTGGGAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGRHLQV*FLGGLG
Trigger: CCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGCTGGACAGGTTGCATaGCCCCATGCCCCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVAGQVA*PHAPGR
Trigger: CCTACCCGGGGCATGGGGCCATGCAACCTGTCCAGC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAAGAGGCCCCCATTCTaGATCCAGCCCGTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTKRPPF*IQPVCS
Trigger: ACTACACACGGGCTGGATCCAGAATGGGGGCCTCTT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATCATGATCACGGACATTaGGCATGTTCTGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDHDHGH*ACSESP
Trigger: AGGGGATTCAGAACATGCCCAATGTCCGTGATCATG...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGCCCAAAAGATGGGGTTaGCCTCATAGCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLPKRWG*PHSHPQ
Trigger: CTGTGGGTGGCTATGAGGCCAACCCCATCTTTTGGG...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGAGCACGGTGGTGATGTaGGACCAGTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPESTVVM*DQLCWA
Trigger: GGCCCAGCACAACTGGTCCCACATCACCACCGTGCT...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRELSMS*HWDFWS
Trigger: GGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAATGGCTCGGCTGGCTaGGCCCTGGATACTGATCAT +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWINGSAG*ALDTDH
Trigger: ATGATCAGTATCCAGGGCCCAGCCAGCCGAGCCATT...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAATGGCTCGGCTGGCTaGGCCCTGGATACTGATCAT +
Preference number: 4 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTNGSAG*ALDTDH
Trigger: ATGATCAGTATCCAGGGCCCAGCCAGCCGAGCCATT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCACGCAGGACGCCTTTaGAATGTGCAGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEHAGRL*NVQLPA
Trigger: GGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGTGTAACCGTAGGCGATaGTCTTGTCGATGGCGAACC +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLCNRRR*SCRWRT
Trigger: GGTTCGCCATCGACAAGACCATCGCCTACGGTTACA...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGTAACCGTAGGCGATaGTCTTGTCGATGGCGAACC +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDCNRRR*SCRWRT
Trigger: GGTTCGCCATCGACAAGACCATCGCCTACGGTTACA...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGTCACCCTCTTGTTGTTaGGGTCGAAGGGCGACTTCA +
Preference number: 4 (lower is better)
Translates to: SVDSLHPLVVGVEGRLQVSPSCC*GRRATS
Trigger: TGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGA...CACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGTCACCCTCTTGTTGTTaGGGTCGAAGGGCGACTTCA +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLSPSCC*GRRATS
Trigger: TGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGA...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGAATGGATGGACAGCATaGGATGGGGCATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLNGWTA*DGACGL
Trigger: CAGACCACATGCCCCATCCCATGCTGTCCATCCATT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHHLLEA*KGLQAM
Trigger: CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTG...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCCTCCAGGCCAAACATaGGTACTTTGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRPPGQT*VLCWKK
Trigger: CTTCTTCCAGCAAAGTACCCATGTTTGGCCTGGAGG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR TCA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGGAAGGCAAACTTGTCTaGCACCTCCTCCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSEGKLV*HLLPKD
Trigger: ATCTTTTGGGAGGAGGTGTCAGACAAGTTTGCCTTC...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGACGCAGACCGTGGACTTaGTTCCTGTCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRRRPWT*FLSSPA
Trigger: TGCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCG...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRMGHVV*ALSRFP
Trigger: AGGGAATCTACTGAGGGCTCAGACCACATGCCCCAT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCGGAGAGCCCTGCACTaGGTGCCCGTGTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVRRALH*VPVCCG
Trigger: TCCACAACACACGGGCACTCAGTGCAGGGCTCTCCG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTGGGCCACCACCGAGGTaGCCTGTCCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVGPPPR*PVPPSG
Trigger: CCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCC...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAAGCAGGCCTGCCGTGTaGCAGGTGGTCCCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSRPAV*QVVPEV
Trigger: GACCTCCGGGACCACCTGGCACACGGCAGGCCTGCT...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCATCACTGGGCCGCAGCTaGCACAGCAGGCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSLGRS*HSRPAV
Trigger: CACGGCAGGCCTGCTGTGGCAGCTGCGGCCCAGTGA...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCGAGGGTGGTACAGGTaGCAGCGGGGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVRGWYR*QRGPWY
Trigger: GTACCATGGACCCCGCTGGCACCTGTACCACCCTCG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCGTCCACACACGAATaGCGGTCACTGGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEPSTHE*RSLGSS
Trigger: AGAACTGCCCAGTGACCGGCATTCGTGTGTGGACGG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAACCCAGCATCATTCCTaGGCTGTTGAAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRTQHHS*AVEATA
Trigger: GGCTGTGGCTTCAACAGCGCAGGAATGATGCTGGGT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCACGAAGCCAGGCAGGTaGGTGGGCTCCAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVTKPGR*VGSRVQ
Trigger: CTGGACTCTGGAGCCCACGCACCTGCCTGGCTTCGT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGTGTGGCTTGCCCAGTaGCCTGAGCTAGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVVWLAQ*PELGLC
Trigger: GCACAGCCCTAGCTCAGGCCACTGGGCAAGCCACAC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCACTCATGCCCAGCTTaGCCAGGTGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEHSCPA*PGGTGS
Trigger: AGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGCTGCCGTGTGCCAGGTaGTCCCGGAGGTCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMLPCAR*SRRSAA
Trigger: AGCGGCTGACCTCCGGGACCACCTGGCACACGGCAG...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACAAGAGGCCCCCATTCTaGATCCAGCCCGTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDKRPPF*IQPVCS
Trigger: ACTACACACGGGCTGGATCCAGAATGGGGGCCTCTT...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTATGCCAGCGGGGTCCATaGTACCGTCGTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLCQRGP*YRRAAH
Trigger: ATGTGCCGCACGACGGTACCATGGACCCCGCTGGCA...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCACTGCCCTGGCGAGGGTaGTACAGGTGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKALPWRG*YRCQRG
Trigger: ACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAG...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCAAAGGACAGCCGCATaGCTCGGACCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVQRTAA*LGPGAL
Trigger: CAGGGCACCTGGTCCGAGCCATGCGGCTGTCCTTTG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTCCTCCAGGCCAAACATaGGTACTTTGTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIPPGQT*VLCPPW
Trigger: CCATGGAGGACAAAGTACCCATGTTTGGCCTGGAGG...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTATCAGCCCTCCGGACATaGCCCACCACTTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLSALRT*PTTWPF
Trigger: GAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGA...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDRWSCR*RTQSQP
Trigger: GGGCTGACTTTGGGTTCGCCATCGACAAGACCATCG...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGTCTCTGTCCGTATCTaGTTTGGGGGTTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLVSVRI*FGGFRR
Trigger: CCTGCGAAAACCCCCAAACCAGATACGGACAGAGAC...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGCTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLLGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLAFWED*GGLETA
Trigger: GGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCGCCGGTTGGACGCGATaGAGAGGCCCCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAAGWTR*RGPHSG
Trigger: TCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGC...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR TCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCTTTGTCCTCCATGGTaGAGCACACCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQALCPPW*STPGAG
Trigger: GCCGGCGCCTGGTGTGCTTCACCATGGAGGACAAAG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCTACTCGTCCAGGCGCTaGCGGTTGGACGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVYSSRR*RLDAMK
Trigger: CTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTA...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGACAGGGCTGCAGGGCTaGCCTAACCCCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVTGLQG*PNPRSC
Trigger: GCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGT...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGCTCGGACCAGGTaGCCTGCGGCTCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAMARTR*PAALSS
Trigger: GCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCAT...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVDGAVP*VDEAVL
Trigger: AAGCACGGCCTCATCAACGCAGGGTACCGCGCCATC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATAGACACTTACAGGTTTaGTTTCTGGGAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDRHLQV*FLGGLG
Trigger: CCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGCCACCTCCACGTCACTaGGCCGCAGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQPPPRH*AAAATA
Trigger: TGCTGTGGCAGCTGCGGCCCAGTGACGTGGAGGTGG...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAACCACCCGCCGAGTGTaGGCCAGAAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKATTRRV*ARSSTS
Trigger: GGAGGTGGAGCTTCTGGCCCACACTCGGCGGGTGGT...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGTGCCAGCGGGGTCCATaGTACCGTCGTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVCQRGP*YRRAAH
Trigger: ATGTGCCGCACGACGGTACCATGGACCCCGCTGGCA...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCGCAGGGTGTCTGGATaGAACCATGCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPERRVSG*NHAESP
Trigger: TGGAGACTCAGCATGGTTCCATCCAGACACCCTGCG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTATTGATCGTGTCGTGGTaGGGCGGGAAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLLIVSW*GGKAKV
Trigger: CACCTTCGCCTTCCCGCCCCACCACGACACGATCAA...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACACGCAGGACGCCTTTaGAATGTGCAGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLHAGRL*NVQLPA
Trigger: GGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTG...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCGGCACAAGTTCTGGCTaGGTCCAGGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAGTSSG*VQGPGT
Trigger: GGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCC...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACCAGGATGGGCCATCTTaGTCTCTGTCCGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDQDGPS*SLSVSG
Trigger: ACCAGATACGGACAGAGACCAAGATGGCCCATCCTG...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDHLLEA*KGLQAM
Trigger: CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
3UTR CAA 72 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGCCTTCCAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SPRHLQVCFLGG*GWIRDCLPVSD
Trigger: GTCACTGACTGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAAGCTGCCTCCACCAATaGCCACCACGTTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSCLHQ*PPRWPC
Trigger: GCACGGCCAACGTGGTGGTCATTGGTGGAGGCAGCT...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGGCCGGTTGGACGCGATaGAGAGGCCCCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQAGWTR*RGPHSG
Trigger: TCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGC...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGAAGGCAAACTTGTCTaGCACCTCCTCCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVEGKLV*HLLPKD
Trigger: ATCTTTTGGGAGGAGGTGTCAGACAAGTTTGCCTTC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCGAGGGTGGTACAGGTaGCAGCGGGGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVRGWYR*QRGPWY
Trigger: GTACCATGGACCCCGCTGGCACCTGTACCACCCTCG...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCAAGGAGTTCCTCGTaGAGCGGGTCTCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVPRSSS*SGSLLM
Trigger: CATGAGGAGAGACCCGCTGCACGAGGAACTCCTTGG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTCTTTGGATGGTGTaGCTTGCCCAGTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVPLWMV*LAQWPE
Trigger: CTCAGGCCACTGGGCAAGCCACACCATCCAAAGAGG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371872.8
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCAGCCATGCCGCTCCTaGAACACGCAGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAQPCRS*NTQPCP
Trigger: TGGACAAGGCTGCGTGTTCCAGGAGCGGCATGGCTG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCAGCACGGTGGTGATGTaGGACCAGTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQASTVVM*DQLCWA
Trigger: GGCCCAGCACAACTGGTCCCACATCACCACCGTGCT...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCGGCTGGCTGGGCCCTaGATACTGATCATACCCAGG +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQARLAGP*ILIIPR
Trigger: CCTGGGTATGATCAGTATCCAGGGCCCAGCCAGCCG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCTGGGAGGATTGGGGTaGATTAGAGACTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPELGGLG*IRDCLP
Trigger: TGGAAGGCAGTCTCTAATCCACCCCAATCCTCCCAG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIHLLEA*KGLQAM
Trigger: CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTG...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCATGGATGGAACCATGCTaGGTCTCCACACCCGCGACC +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAWMEPC*VSTPAT
Trigger: GGTCGCGGGTGTGGAGACTCAGCATGGTTCCATCCA...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTCCATGGTACCGTCGTaGGGCACATACAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQSMVPS*GTYRVP
Trigger: CGGGACCCTGTATGTGCCGCACGACGGTACCATGGA...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGTCCATGGTACCGTCGTaGGGCACATACAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMSMVPS*GTYRVP
Trigger: CGGGACCCTGTATGTGCCGCACGACGGTACCATGGA...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR GCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCACCGGCCCACAGCACTTaGCCACACTCCTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSPAHST*PHSCTV
Trigger: AACTGTGCAGGAGTGTGGGCAAGTGCTGTGGGCCGG...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMVGSLP*IQPHQV
Trigger: TACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGAC...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTAGGTGGTACAGGGTCTaGCAGCCCAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVRWYRV*QPKLPP
Trigger: TGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCT...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGGCTGCAGCAGCTGGTTaGGAGGGCAGTGTCATTTGC +
Preference number: 4 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVAAAAG*EGSVIC
Trigger: GCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGC...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCAGTCGTTCCATGTGTaGACTAAATGCATATACACA +
Preference number: 4 (lower is better)
Translates to: MHIHIEQGCRAALTPEAAQSFHV*TKCIYT
Trigger: TGTGTATATGCATTTAGTCCACACATGGAACGACTG...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCTTCTTGATCGTGTCGTaGTGGGGCGGGAAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAFLIVS*WGGKAK
Trigger: CTTCGCCTTCCCGCCCCACCACGACACGATCAAGAA...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAELSMS*HWDFWS
Trigger: GGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGACACTCCTGCACAGTTaGCCACGCAGGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQTLLHS*PRRVSG
Trigger: TCCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGT...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCACAGAGTCTTGGTCTCTaGCGGGCTCAGCACATGGGA +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAQSLGL*RAQHMG
Trigger: TCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTG...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMWDFWS*STVVMW
Trigger: CCACATCACCACCGTGCTGCAGGACCAGAAGTCCCA...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR GCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCTTGGCCCAGCAGAGGTaGCTTCACCTTCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQALAQQR*LHLLAS
Trigger: GGAAGCAAGAAGGTGAAGGCACCTCTGCTGGGCCAA...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439388.6
CDS-3UTR CCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCACTCATGCCCAGCTTaGCCAGGTGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVHSCPA*PGGTGS
Trigger: AGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTG...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGAAGAGGCCCCCATTCTaGATCCAGCCCGTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVKRPPF*IQPVCS
Trigger: ACTACACACGGGCTGGATCCAGAATGGGGGCCTCTT...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCGCAGGGTGTCTGGATaGAACCATGCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQARRVSG*NHAESP
Trigger: TGGAGACTCAGCATGGTTCCATCCAGACACCCTGCG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCATGATCACGGACATTaGGCATGTTCTGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEHDHGH*ACSESP
Trigger: AGGGGATTCAGAACATGCCCAATGTCCGTGATCATG...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACCTCCAGGCCAAACATaGGTACTTTGTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLPPGQT*VLCPPW
Trigger: CCATGGAGGACAAAGTACCCATGTTTGGCCTGGAGG...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTCCAGGCCAAACATaGGTACTTTGTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVPPGQT*VLCPPW
Trigger: CCATGGAGGACAAAGTACCCATGTTTGGCCTGGAGG...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGCTTTCTGGGAGGATTaGGGTGGATTAGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVAFWED*GGLETA
Trigger: GGCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGCTCTCATGCCCTTCTaGGGTCATCACTCCACACTG +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAALMPF*GHHSTL
Trigger: CAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGC...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGATGGGGCATGTGGTCTaGGCCCTCAGTAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMMGHVV*ALSRFP
Trigger: AGGGAATCTACTGAGGGCTCAGACCACATGCCCCAT...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGCCCAAAAGATGGGGTTaGCCTCATAGCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQPKRWG*PHSHPQ
Trigger: CTGTGGGTGGCTATGAGGCCAACCCCATCTTTTGGG...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCGACGGAGTAGTTCTTaGCGTAGGACTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQARRSSS*RRTHGF
Trigger: GAAGCCATGAGTCCTACGCCAAGAACTACTCCGTCG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGTCAGTAGCTTGTGGGTaGAGAACGGGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMSVACG*RTGRPR
Trigger: ACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGA...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR TCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCACCCTGGGTCTGTATTTaGCTGCCTCCTCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAPWVCI*LPPPKR
Trigger: TCTTTTGGGAGGAGGCAGTCAAATACAGACCCAGGG...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR TCA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCATCTCTGTGGATGTTTTaGGGCAAAGCCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSLWMF*GKALQL
Trigger: CAGCTGGAGGGCTTTGCCTCAAAACATCCACAGAGA...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTCATCACTCCACACTaGGCAGACCTTCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAVITPH*ADLLCG
Trigger: TCCACAGAGAAGGTCTGCGCAGTGTGGAGTGATGAC...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR GCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGGACGTAGGACTTGTGTaGTCTCATGCCCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQDVGLV*SHALLR
Trigger: CCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTC...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCTGGGAAGAAAAGACGTaGTCCTCAGCCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAWEEKT*SSACLF
Trigger: AAAGAGGCAGGCTGAGGACCACGTCTTTTCTTCCCA...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR GCA 90 bp CCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGACTTGTGTGCTCTCATaGCCTTCTGAGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: PESGTFILVSLFLQKLKQTCVLS*PSEVIT
Trigger: AGTGATGACCTCAGAAGGGCATGAGAGCACACAAGT...CTGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCATGATCACGGACATTaGGCATGTTCTGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVHDHGH*ACSESP
Trigger: AGGGGATTCAGAACATGCCCAATGTCCGTGATCATG...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CCA 90 bp TATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGCACCTTCTAGAAGCTTaGAAAGGGCTACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: YQVFTKHLLEAWKGLQAMHLLEA*KGLQAM
Trigger: CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTG...CATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp TCCATGGTGAAGCACACCAGGCGCCGGCGGAGGCCTGCGGCCCGCTaGTGCTCCAGGGCCTCCCTCCCCAGGAAGGGCACCGGCGACTTG +
Preference number: 5 (lower is better)
Translates to: SMVKHTRRRRRPAAR*CSRASLPRKGTGDL
Trigger: CAAGTCGCCGGTGCCCTTCCTGGGGAGGGAGGCCCTGGAGCAGCAGCGGGCCGCAGGCCTCCGCCGGCGCCTGGTGTGCTTCACCATGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp TCCCGGAGGTCAGCCGCTCCCGCTCCAGCAGCACCGCCCCACTCATaGCCAGCTTGGCCAGGTGGTACAGGGTCTGGCAGCCCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRRSAAPAPAAPPHS*PAWPGGTGSGSPSC
Trigger: GCAGCTTGGGCTGCCAGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGGGGCGGTGCTGCTGGAGCGGGAGCGGCTGACCTCCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp CGTGGTGGGGCGGGAAGGCGAAGGTGTACTCGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGTGCGCGCGGCTCCCGTAAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: RGGAGRRRCTRLPAA*GRRSPRARGSRKPR
Trigger: ACGGGGCTTACGGGAGCCGCGCGCACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTCGCCTTCCCGCCCCACCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp CAGGAAGGGCACCGGCGACTTGAGCTTGCAGGTGAAGGCCAGGCCTaGCTCCAGGGGGCTGTCGTCTGGCCGCAGGTCCGCGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: QEGHRRLELAGEGQA*LQGAVVWPQVRVPV
Trigger: CACTGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTGGAGGCAGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GACAGGTTGCATGGCCCCATGCCCCGGGTAGGGCTCTGGCGAGGGTaGGCAGCAGCCACACGTAGGGCTCGGCTCAGTGAGGCCATGGGG +
Preference number: 5 (lower is better)
Translates to: DRLHGPMPRVGLWRG*AAATRRARLSEAMG
Trigger: CCCCATGGCCTCACTGAGCCGAGCCCTACGTGTGGCTGCTGCCCACCCTCGCCAGAGCCCTACCCGGGGCATGGGGCCATGCAACCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp TCACCACCCGCCGAGTGTGGGCCAGAAGCTCCACCTCCACGTCACTaGGCCGCAGCTGCCACAGCAGGCCTGCCGTGTGCCAGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SPPAECGPEAPPPRH*AAAATAGLPCARWS
Trigger: GGACCACCTGGCACACGGCAGGCCTGCTGTGGCAGCTGCGGCCCAGTGACGTGGAGGTGGAGCTTCTGGCCCACACTCGGCGGGTGGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp TCCACCAATGACCACCACGTTGGCCGTGCTGGGCAGGGGCCGGCTTaGGCCTTGGGCCACCACCGAGGTGCCCTGTCCCTCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: STNDHHVGRAGQGPA*ALGHHRGALSLLQG
Trigger: ACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGTGGGCAGGGGCCGGCTaGGGCCTTGGGCCACCACCG +
Preference number: 5 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWWAGAG*GLGPPP
Trigger: CGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCA...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS TCA 90 bp TGGCCAGGTGGTACAGGGTCTGGCAGCCCAAGCTGCCTCCACCAATaGCCACCACGTTGGCCGTGCTGGGCAGGGGCCGGCTTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: WPGGTGSGSPSCLHQ*PPRWPCWAGAGLGL
Trigger: AAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGGTGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp CCGTGCTGGGCAGGGGCCGGCTTGGGCCTTGGGCCACCACCGAGGTaGCCTGTCCCTCCTTCAGGGTCCGCTGATATGGCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: PCWAGAGLGLGPPPR*PVPPSGSADMAHSS
Trigger: AGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp CTTGATCGTGTCGTGGTGGGGCGGGAAGGCGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGCGTAGTCCTCGTGCGCGCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LDRVVVGREGEGVLV*QQPAVGVVLVRAAP
Trigger: GGGAGCCGCGCGCACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTCGCCTTCCCGCCCCACCACGACACGATCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp TCAGCCGCTCCCGCTCCAGCAGCACCGCCCCACTCATGCCCAGCTTaGCCAGGTGGTACAGGGTCTGGCAGCCCAAGCTGCCTCCACCAA +
Preference number: 5 (lower is better)
Translates to: SAAPAPAAPPHSCPA*PGGTGSGSPSCLHQ
Trigger: TTGGTGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGGGGCGGTGCTGCTGGAGCGGGAGCGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp GGTGCCAGGCGGCTGACAGTCAGGTCACTCTCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTACACGGTGGAGCCTGGGGGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: GARRLTVRSLSVPPR*LSMHVYTVEPGGRL
Trigger: CAGCCGACCCCCAGGCTCCACCGTGTACACGTGCATGCTCAACCACCGTGGGGGCACCGAGAGTGACCTGACTGTCAGCCGCCTGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCGGGTCTCTCCTCATGTaGCGCCCGGCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTGSLLM*RPASGS
Trigger: TGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCC...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS TCA 90 bp CCTTGGGCCACCACCGAGGTGCCCTGTCCCTCCTTCAGGGTCCGCTaGTATGGCACACTCTTCTCGGCTGTGGGGCCAGCTGCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PWATTEVPCPSFRVR*YGTLFSAVGPAALD
Trigger: GTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp ATGCTCAGGGAGTCGATGGCGCGGTACCCTGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATCACAGCCCGGTACACAGGCACGCAG +
Preference number: 5 (lower is better)
Translates to: MLRESMARYPALMRP*LAPAAITARYTGTQ
Trigger: CTGCGTGCCTGTGTACCGGGCTGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTCCCTGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GTCCCTCCTTCAGGGTCCGCTGATATGGCACACTCTTCTCGGCTGTaGGGCCAGCTGCGCTGGACAGGTTGCATGGCCCCATGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: VPPSGSADMAHSSRL*GQLRWTGCMAPCPG
Trigger: CCCGGGGCATGGGGCCATGCAACCTGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp TCGTCCAGGCGCTGCCGGTTGGACGCGATGAAGAGGCCCCCATTCTaGATCCAGCCCGTGTGTAGTCCCGTCTCCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SSRRCRLDAMKRPPF*IQPVCSPVSSSSSR
Trigger: CCGGGAGCTGGAGGAGGAGACGGGACTACACACGGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp GAGGAGGAGCTGGATGCACCCAAGGTGGGGAACGACAGGGAGAGGTaGTTACCCAGGACCTCAGCCAGGGCTGCTCCCTGGAGCCACGGC +
Preference number: 5 (lower is better)
Translates to: EEELDAPKVGNDRER*LPRTSARAAPWSHG
Trigger: GCCGTGGCTCCAGGGAGCAGCCCTGGCTGAGGTCCTGGGTAACCACCTCTCCCTGTCGTTCCCCACCTTGGGTGCATCCAGCTCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CAA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGCTGCGCTGGACAGGTaGCATGGCCCCATGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWAALDR*HGPMPR
Trigger: CCGGGGCATGGGGCCATGCAACCTGTCCAGCGCAGC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp CAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGGGCCGGCTTGGGCCTaGGGCCACCACCGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: QGKCRCSSWLGGQCHLLKGPAWA*GHHRGA
Trigger: GGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCC...CTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCAATGACCACCACGTaGGCCGTGCTGGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDPMTTT*AVLGRG
Trigger: GCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGG...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGCCACCAGCGGGACCTaGACTCCAGCCATCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDATSGT*TPAIRP
Trigger: GGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGGC...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp CCGGTAGCCTTTCTCAATGCTCAGGGAGTCGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTTGGCACCCGCGGCCATCACAGCCCG +
Preference number: 5 (lower is better)
Translates to: PVAFLNAQGVDGAVP*VDEAVLGTRGHHSP
Trigger: CGGGCTGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTCCCTGAGCATTGAGAAAGGCTACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GGCCACCACCGAGGTGCCCTGTCCCTCCTTCAGGGTCCGCTGATATaGCACACTCTTCTCGGCTGTGGGGCCAGCTGCGCTGGACAGGTT +
Preference number: 5 (lower is better)
Translates to: GHHRGALSLLQGPLI*HTLLGCGASCAGQV
Trigger: AACCTGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp CAGAAGCTGCCCTGGCGAGGGTGGTACAGGTGCCAGCGGGGTCCATaGTACCGTCGTGCGGCACATACAGGGTCCCGTAGAGGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: QKLPWRGWYRCQRGP*YRRAAHTGSRRGRP
Trigger: TGGACGACCTCTACGGGACCCTGTATGTGCCGCACGACGGTACCATGGACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp GCCCGGCCAGCGGCTCATCGTGGGGGAAGACGACGGAGTAGTTCTTaGCGTAGGACTCATGGCTTCGCTCTCGGATCCAGCGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: ARPAAHRGGRRRSSS*RRTHGFALGSSGGG
Trigger: ACCACCCCCGCTGGATCCGAGAGCGAAGCCATGAGTCCTACGCCAAGAACTACTCCGTCGTCTTCCCCCACGATGAGCCGCTGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp AGCCGCATGGCTCGGACCAGGTGCCCTGCGGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCCTCGTTGCTCAGGTCTGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRMARTRCPAALSSL*VENGKASLLRSASS
Trigger: GCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCATGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp AGGTCCTCGGAGCTGTCGATGAGCTGGCACTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGGGACCAGTTGTGCTGGGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RSSELSMSWHWDFWS*STVVMWDQLCWATA
Trigger: GGCCGTGGCCCAGCACAACTGGTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp GCCATCACAGCCCGGTACACAGGCACGCAGGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCCCCCACAAAGGACAGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: AITARYTGTQDAFGM*SSQPSSPTKDSRMA
Trigger: AGCCATGCGGCTGTCCTTTGTGGGGGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGCCTGTGTACCGGGCTGTGATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GTGGTGTGGGGGTCCTGGGGCAGAGGACCTCCTCTTTGGATGGTGTaGCTTGCCCAGTGGCCTGAGCTAGGGCTGTGCTCACCCAACAGG +
Preference number: 5 (lower is better)
Translates to: VVWGSWGRGPPLWMV*LAQWPELGLCSPNR
Trigger: CCTGTTGGGTGAGCACAGCCCTAGCTCAGGCCACTGGGCAAGCCACACCATCCAAAGAGGAGGTCCTCTGCCCCAGGACCCCCACACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 90 bp GCATGGCTCGGACCAGGTGCCCTGCGGCTCTCAGTAGCTTGTGGGTaGAGAACGGGAAGGCCTCGTTGCTCAGGTCTGCGTCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: AWLGPGALRLSVACG*RTGRPRCSGLRPAP
Trigger: AGGTGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGGCCGGCTTGGGCCTaGGGCCACCACCGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFAGPAWA*GHHRGA
Trigger: GGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCC...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp AAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTATGGGCAGGGGCCGGCTaGGGCCTTGGGCCACCACCG +
Preference number: 5 (lower is better)
Translates to: KCRCSSWLGGQCHLLKDVWAGAG*GLGPPP
Trigger: CGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCA...TACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCACTCATGCCCAGCTaGGCCAGGTGGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDPLMPS*ARWYRV
Trigger: GACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGG...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACGCCAGGCACTCCTTCTaGATCGTGTCGTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDARHSF*IVSWWG
Trigger: GCCCCACCACGACACGATCAAGAAGGAGTGCCTGGC...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACTTGATGAGGCCGTGCTaGGCACCCGCGGCCATCACA +
Preference number: 5 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDLMRPC*APAAIT
Trigger: TGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAA...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGGCGCGGTACCCTGCGTaGATGAGGCCGTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWARYPA*MRPCLA
Trigger: TGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGC...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp TACGCCTTGCCCAGCGACATGAGCCTCTTGTACTCGTCCAGGCGCTaGCGGTTGGACGCGATGAAGAGGCCCCCATTCTGGATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: YALPSDMSLLYSSRR*RLDAMKRPPFWIQP
Trigger: GGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCTGGGCAAGGCGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp AGCCTTGTCCAAGGAGTTCCTCGTGCAGCGGGTCTCTCCTCATGTTaGGCCCGGCCAGCGGCTCATCGTGGGGGAAGACGACGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SLVQGVPRAAGLSSC*ARPAAHRGGRRRSS
Trigger: ACTACTCCGTCGTCTTCCCCCACGATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCCGCTGCACGAGGAACTCCTTGGACAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp GCGAGACCGGCCCACCGCTGGGGTCATGGATGTAACCGTAGGCGATaGTCTTGTCGATGGCGAACCCAAAGTCAGCCCTCCGGACATGGC +
Preference number: 5 (lower is better)
Translates to: ARPAHRWGHGCNRRR*SCRWRTQSQPSGHG
Trigger: GCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCTACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
ENST00000469828.1
CDS-3UTR CAA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGCTGCGCTGGACAGGTaGCATGGCCCCATGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGAALDR*HGPMPR
Trigger: CCGGGGCATGGGGCCATGCAACCTGTCCAGCGCAGC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATAGCGGGTACAGAGTCTaGGTCTCTGCCGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDSGYRV*VSAGLS
Trigger: GCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCT...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTGCCACCAGCGGGACCTaGACTCCAGCCATCCGGCCC +
Preference number: 5 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLATSGT*TPAIRP
Trigger: GGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGGC...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGGCCACCAGCGGGACCTaGACTCCAGCCATCCGGCCC +
Preference number: 5 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRATSGT*TPAIRP
Trigger: GGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGGC...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGCCACCAGCGGGACCTaGACTCCAGCCATCCGGCCC +
Preference number: 5 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGATSGT*TPAIRP
Trigger: GGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGGC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGAACGGGAAGGCCTCGTaGCTCAGGTCTGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWNGKAS*LRSASS
Trigger: GCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTT...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTTTGATGAGGCCGTGCTaGGCACCCGCGGCCATCACA +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCLMRPC*APAAIT
Trigger: TGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAA...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTACCGGCGACTTGAGCTaGCAGGTGAAGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCTGDLS*QVKARP
Trigger: AGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGT...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATAAGGGCACCGGCGACTaGAGCTTGCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDKGTGD*SLQVKA
Trigger: GGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTT...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp ATGTCCTTCTCCGGGCGCCCATGGATGATCCAGTGGGCCAGCTCCTaGCCACAGCCACCACCCAGCATCATTCCTGCGCTGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: MSFSGRPWMIQWASS*PQPPPSIIPALLKP
Trigger: TGGCTTCAACAGCGCAGGAATGATGCTGGGTGGTGGCTGTGGGCAGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGGAGAAGGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 90 bp CTGCGGCTCTCAGTAGCTTGTGGGTGGAGAACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCACCTCCTGCAAAATGGCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRLSVACGWRTGRPR*SGLRPAPPAKWLGW
Trigger: CCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GCGATGGTCTTGTCGATGGCGAACCCAAAGTCAGCCCTCCGGACATaGCCCACCACTTGGCCGTTCCTCCAGATGGCCTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: AMVLSMANPKSALRT*PTTWPFLQMASRPN
Trigger: GTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
ENST00000469828.1
CDS-3UTR CAA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGGCCGGCTTGGGCCTaGGGCCACCACCGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLGPAWA*GHHRGA
Trigger: GGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp TCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATCCAATGACCACCACGTaGGCCGTGCTGGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SWDPGPFGTCENGWTAWDPMTTT*AVLGRG
Trigger: GCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGG...ATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATCACACTCCTGCACAGTaGACCACGCAGGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GWVQGPGTQGHLGPVRMDHTPAQ*TTQGVW
Trigger: CCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGTG...ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGAGTCGGCAGCCTTCCTaGCATCCAGCCCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWSRQPS*HPAPPG
Trigger: ACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACT...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGATGTGGGACCAGTaGTGCTGGGCCACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHVMWDQ*CWATAP
Trigger: CGGGGCCGTGGCCCAGCACAACTGGTCCCACATCAC...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAG +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCAALSS*WVENGK
Trigger: CTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGC...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTCACCGGCGACTTGAGCTaGCAGGTGAAGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VEGRLQVSLGTIGHPHSLTGDLS*QVKARP
Trigger: AGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGT...GAGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp GGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGC +
Preference number: 5 (lower is better)
Translates to: GSWDPGPFGTCENGWTAWDMAHH*AVPPDG
Trigger: GCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTC...CCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGCCCTTCACCCTCTTGTaGTTGGGGTCGAAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LGPGSWDPGPFGTCENGWPFTLL*LGSKGD
Trigger: GTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGG...CCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp GAGTGTGGCCCAAGTTCTCCCAGGAGTCCTGGACGTGCAAGTGCATaGGAGAAAAACGCAGCAGTCACCACAGCTCCAGGGCAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: ECGPSSPRSPGRASA*EKNAAVTTAPGQWP
Trigger: CGGCCACTGCCCTGGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 90 bp CACCGCTGGGGTCATGGATGTAACCGTAGGCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCCTCCGGACATGGCCCACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: HRWGHGCNRRRWSCR*RTQSQPSGHGPPLG
Trigger: GCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCTACGGTTACATCCATGACCCCAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
ENST00000469828.1
CDS CCA 90 bp AGGGAGCTCTTGTCAGCTGCAGTGCCCCTCGGCCCTAAGAGTGCTTaGCCCAGCAGAGGTGCCTTCACCTTCTTGCTTCCCAAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RELLSAAVPLGPKSA*PSRGAFTFLLPKQW
Trigger: CCACTGCTTGGGAAGCAAGAAGGTGAAGGCACCTCTGCTGGGCCAAGCACTCTTAGGGCCGAGGGGCACTGCAGCTGACAAGAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427237.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGGTCTCTCCTCATGTaGCGCCCGGCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFAGSLLM*RPASGS
Trigger: TGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCC...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGGGTCTCTCCTCATGTaGCGCCCGGCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRGSLLM*RPASGS
Trigger: TGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCC...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACG +
Preference number: 5 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAVPPRW*SMHVYT
Trigger: CGTGTACACGTGCATGCTCAACCACCGTGGGGGCAC...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAACCGGCGACTTGAGCTaGCAGGTGAAGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DPGPFGTCENGWTAWDGATGDLS*QVKARP
Trigger: AGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGT...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 5 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: GHKFWLGPGSWDPGPFGTCFLGG*GWIRDC
Trigger: GCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCA...GGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp GGGTCGGCTGACATCTGCGGAGAAGAGCCAGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTAGAACTTCCCGAAGTAGGACATGTC +
Preference number: 5 (lower is better)
Translates to: GSADICGEEPVGSLP*IQPHQVELPEVGHV
Trigger: GACATGTCCTACTTCGGGAAGTTCTACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACTGGCTCTTCTCCGCAGATGTCAGCCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp CCCTGGATACTGATCATACCCAGGTCCTCGGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCCTGCAGCACGGTGGTGATGTGGGAC +
Preference number: 5 (lower is better)
Translates to: PWILIIPRSSELSMS*HWDFWSCSTVVMWD
Trigger: GTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGGACCTGGGTATGATCAGTATCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 90 bp TCGATGGCGAACCCAAAGTCAGCCCTCCGGACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCCTCCAGGCCAAACATGGGTACTTTG +
Preference number: 5 (lower is better)
Translates to: SMANPKSALRTWPTT*PFLQMASRPNMGTL
Trigger: CAAAGTACCCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
ENST00000469828.1
CDS-3UTR CAA 90 bp CGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTCCACTCATGCCCAGCTaGGCCAGGTGGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: RCSSWLGGQCHLLKDVGLPLMPS*ARWYRV
Trigger: GACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGG...AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCCGGAGCGACATGAGCCTCTaGTACTCGTCCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: HIHIEQGCRAALTPEAARSDMSL*YSSRRC
Trigger: GCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCT...CCGGGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CCAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTTGCTGAACACACTCCTGCACAGTaGACCACGCAGGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PGEMPLQQLVGRAVSFAEHTPAQ*TTQGVW
Trigger: CCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGTG...TTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCAAGCACGGGGACCCTGTaGATGGCGCCTTCAATGTGC +
Preference number: 5 (lower is better)
Translates to: DPGPFGTCENGWTAWDGASTGTL*MAPSMC
Trigger: GCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCT...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTTCCCCCATCAGGGGCTaGTGGTCGGGCGTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGSPIRG*WSGVKD
Trigger: ATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGA...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGAGTCGGCAGCCTTCCTaGCATCCAGCCCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGSRQPS*HPAPPG
Trigger: ACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACT...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACG +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGVPPRW*SMHVYT
Trigger: CGTGTACACGTGCATGCTCAACCACCGTGGGGGCAC...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGGTGATGTGGGACCAGTaGTGCTGGGCCACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SVDSLHPLVVGVEGRLQVVMWDQ*CWATAP
Trigger: CGGGGCCGTGGCCCAGCACAACTGGTCCCACATCAC...CACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAACGGGAAGGCCTCGTaGCTCAGGTCTGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGNGKAS*LRSASS
Trigger: GCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTT...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGCACGCAGGACGCCTTaGGAATGTGCAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHARRTP*ECAAPS
Trigger: GCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGC...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGTTGATGAGGCCGTGCTaGGCACCCGCGGCCATCACA +
Preference number: 5 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRLMRPC*APAAIT
Trigger: TGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAA...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTGCGCGGTACCCTGCGTaGATGAGGCCGTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGARYPA*MRPCLA
Trigger: TGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGC...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGAGGAAGGGCACCGGCGACTaGAGCTTGCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RIWFGGFRRTRPRLRTGRKGTGD*SLQVKA
Trigger: GGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTT...CCTCCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTAAGGGCACCGGCGACTaGAGCTTGCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGKGTGD*SLQVKA
Trigger: GGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTATTCCCTTCACCCTCTaGTTGTTGGGGTCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCIPFTL*LLGSKG
Trigger: GCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAAT...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp GAAGGAGTGTGGCCCAAGTTCTCCCAGGAGTCCTGGACGTGCAAGTaGATGGGAGAAAAACGCAGCAGTCACCACAGCTCCAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: EGVWPKFSQESWTCK*MGEKRSSHHSSRAV
Trigger: CACTGCCCTGGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCACACTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS GCA 90 bp GGCAAGGAAGGAGTGTGGCCCAAGTTCTCCCAGGAGTCCTGGACGTaGAAGTGCATGGGAGAAAAACGCAGCAGTCACCACAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GKEGVWPKFSQESWT*KCMGEKRSSHHSSR
Trigger: CCTGGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCACACTCCTTCCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 90 bp GGGTCCCGTAGAGGTCGTCCACATTCATCAGCGGGTACAGAGTCTTaGTCTCTGCCGGGCTCAGCACATGGGATTCCACACCATACGCCT +
Preference number: 5 (lower is better)
Translates to: GSRRGRPHSSAGTES*SLPGSAHGIPHHTP
Trigger: AGGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCTGATGAATGTGGACGACCTCTACGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTTCCACACCATACGCCTaGCCCAGCGACATGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGSTPYA*PSDMSL
Trigger: GAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGA...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTCCACACCATACGCCTaGCCCAGCGACATGAGCCTC +
Preference number: 5 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGSTPYA*PSDMSL
Trigger: GAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGA...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTAGCACGGGGACCCTGTaGATGGCGCCTTCAATGTGC +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGSTGTL*MAPSMC
Trigger: GCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCACCGCAGACCGTGGACTaGATTCCTGTCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAPQTVD*IPVFSS
Trigger: GCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCGG...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCTCCCCCATCAGGGGCTaGTGGTCGGGCGTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GMWSEPSVDSLHPLVVGVSPIRG*WSGVKD
Trigger: ATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGA...GACCCCAACAACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGCCAGGCACTCCTTCTaGATCGTGTCGTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRARHSF*IVSWWG
Trigger: GCCCCACCACGACACGATCAAGAAGGAGTGCCTGGC...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACG +
Preference number: 5 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRVPPRW*SMHVYT
Trigger: CGTGTACACGTGCATGCTCAACCACCGTGGGGGCAC...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGTGATGTGGGACCAGTaGTGCTGGGCCACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLVMWDQ*CWATAP
Trigger: CGGGGCCGTGGCCCAGCACAACTGGTCCCACATCAC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGTGATGTGGGACCAGTaGTGCTGGGCCACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLVMWDQ*CWATAP
Trigger: CGGGGCCGTGGCCCAGCACAACTGGTCCCACATCAC...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAG +
Preference number: 5 (lower is better)
Translates to: VRIWFGGFRRTRPRLRTGAALSS*WVENGK
Trigger: CTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGC...CCCTGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAG +
Preference number: 5 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGAALSS*WVENGK
Trigger: CTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGC...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGC +
Preference number: 5 (lower is better)
Translates to: PQDGPSWSLSVSGLGVFADMAHH*AVPPDG
Trigger: GCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTC...TGCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGTCGAAGGGCGACTTCAGGTGAGCCTGGGCACCATAGGTCACCCCCATTCTCTTTCACCCTCTTGTTGTaGGGGTCGAAGGGCGACTTC +
Preference number: 5 (lower is better)
Translates to: GRRATSGEPGHHRSPPFSFTLLL*GSKGDF
Trigger: GAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAA...AGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTCCCTTCACCCTCTTGTaGTTGGGGTCGAAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGPFTLL*LGSKGD
Trigger: GTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGG...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp GTAGAGGTCGTCCACATTCATCAGCGGGTACAGAGTCTTGGTCTCTaGCGGGCTCAGCACATGGGATTCCACACCATACGCCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VEVVHIHQRVQSLGL*RAQHMGFHTIRLAQ
Trigger: CTGGGCAAGGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCTGATGAATGTGGACGACCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp AGTGCATGGGAGAAAAACGCAGCAGTCACCACAGCTCCAGGGCAGTaGCCGGGTAGCCCACACTTCTCCTGTCCCTGCACTCAAAGACAA +
Preference number: 5 (lower is better)
Translates to: SAWEKNAAVTTAPGQ*PGSPHFSCPCTQRQ
Trigger: TTGTCTTTGAGTGCAGGGACAGGAGAAGTGTGGGCTACCCGGCCACTGCCCTGGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298628.6
CDS CCA 90 bp TTCATCAGCGGGTACAGAGTCTTGGTCTCTGCCGGGCTCAGCACATaGGATTCCACACCATACGCCTTGCCCAGCGACATGAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FISGYRVLVSAGLST*DSTPYALPSDMSLL
Trigger: CAAGAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCTGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 90 bp ATACTGATCATACCCAGGTCCTCGGAGCTGTCGATGAGCTGGCACTaGGACTTCTGGTCCTGCAGCACGGTGGTGATGTGGGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: ILIIPRSSELSMSWH*DFWSCSTVVMWDQL
Trigger: CAACTGGTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGGACCTGGGTATGATCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCCACTCATGCCCAGCTaGGCCAGGTGGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLPLMPS*ARWYRV
Trigger: GACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGG...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGAGCGACATGAGCCTCTaGTACTCGTCCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWSDMSL*YSSRRC
Trigger: GCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGCCGCAGACCGTGGACTaGATTCCTGTCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGPQTVD*IPVFSS
Trigger: GCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCGG...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGAGCCTGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAG +
Preference number: 5 (lower is better)
Translates to: RFPSPSCCWGRRATSGEPAALSS*WVENGK
Trigger: CTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGC...AGGCTCACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGCACGCAGGACGCCTTaGGAATGTGCAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTARRTP*ECAAPS
Trigger: GCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTTGATGAGGCCGTGCTaGGCACCCGCGGCCATCACA +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDLMRPC*APAAIT
Trigger: TGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAA...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGCGCGGTACCCTGCGTaGATGAGGCCGTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLARYPA*MRPCLA
Trigger: TGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATACCGGCGACTTGAGCTaGCAGGTGAAGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDTGDLS*QVKARP
Trigger: AGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACCTGTCCAAACATGGGTACTTaGTCCTCCATGGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: HKFWLGPGSWDPGPFGTCPNMGT*SSMVKH
Trigger: GTGCTTCACCATGGAGGACAAAGTACCCATGTTTGG...ACAGGTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATTCACCCTCTTGTTGTaGGGGTCGAAGGGCGACTTC +
Preference number: 5 (lower is better)
Translates to: DPGPFGTCENGWTAWDGAFTLLL*GSKGDF
Trigger: GAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAA...TGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGGGCACAAGTTCTGGCTGGGTCCAGGGTCCTGGGACCCAGGGCCATTTGGGACAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 5 (lower is better)
Translates to: RAQVLAGSRVLGPRAIWDKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...GTCCCAAATGGCCCTGGGTCCCAGGACCCTGGACCCAGCCAGAACTTGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATGTGGTACCGTGGCGATGGTCTaGTCGATGGCGAACCCAAAG +
Preference number: 5 (lower is better)
Translates to: GPFGTCENGWTAWDGACGTVAMV*SMANPK
Trigger: CTTTGGGTTCGCCATCGACAAGACCATCGCCACGGT...ACCACATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGAGCGACATGAGCCTCTaGTACTCGTCCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLSDMSL*YSSRRC
Trigger: GCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCACACTCCTGCACAGTaGACCACGCAGGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDHTPAQ*TTQGVW
Trigger: CCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGTG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTAGATTCCCTTCACCCTCTTGTTGTTGGGGTCGAAGGGCGACTTCAGGTGAGCCTGGAACACGCAGCCTaGTCCAAGGAGTTCCTCGTG +
Preference number: 5 (lower is better)
Translates to: VDSLHPLVVGVEGRLQVSLEHAA*SKEFLV
Trigger: CACGAGGAACTCCTTGGACAAGGCTGCGTGTTCCAG...GCTCACCTGAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGCCAGGCACTCCTTCTaGATCGTGTCGTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTARHSF*IVSWWG
Trigger: GCCCCACCACGACACGATCAAGAAGGAGTGCCTGGC...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAAGTCGGCAGCCTTCCTaGCATCCAGCCCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTSRQPS*HPAPPG
Trigger: ACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACT...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACG +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTVPPRW*SMHVYT
Trigger: CGTGTACACGTGCATGCTCAACCACCGTGGGGGCAC...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGAACGGGAAGGCCTCGTaGCTCAGGTCTGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KPWSLSPRHLQVCFLGGLNGKAS*LRSASS
Trigger: GCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTT...CAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGCACGCAGGACGCCTTaGGAATGTGCAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVARRTP*ECAAPS
Trigger: GCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAAGGGCACCGGCGACTaGAGCTTGCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIKGTGD*SLQVKA
Trigger: GGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTT...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGC +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTDMAHH*AVPPDG
Trigger: GCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTC...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGC +
Preference number: 5 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWIDMAHH*AVPPDG
Trigger: GCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTC...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCCAGGGCCATTTGGGACCTGTGAGAATGGATGGACAGCATGGGATGGGGCATTTCACCCTCTTGTTGTaGGGGTCGAAGGGCGACTTC +
Preference number: 5 (lower is better)
Translates to: TQGHLGPVRMDGQHGMGHFTLLL*GSKGDF
Trigger: GAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAA...ATGCCCCATCCCATGCTGTCCATCCATTCTCACAGGTCCCAAATGGCCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp TGGTTGGGAGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTGTGTaGTCTCATGCCCTTCTGAGGTCATCACTCCACACTGCGCAGACC +
Preference number: 5 (lower is better)
Translates to: WLGGQCHLLKDVGLV*SHALLRSSLHTAQT
Trigger: GGTCTGCGCAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGAGACAAGGCATCCCCTaGGAGGCGGAGGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLRQGIP*EAEVDR
Trigger: TCTGTCTACCTCCGCCTCCAAGGGGATGCCTTGTCT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGAGGCCGAAGGCAAACTaGTCTGACACCTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWRPKAN*SDTSSQ
Trigger: TTGGGAGGAGGTGTCAGACAAGTTTGCCTTCGGCCT...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATCTGGAACACGCAGCCTaGTCCAAGGAGTTCCTCGTG +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDLEHAA*SKEFLV
Trigger: CACGAGGAACTCCTTGGACAAGGCTGCGTGTTCCAG...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACAGTCGGCAGCCTTCCTaGCATCCAGCCCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDSRQPS*HPAPPG
Trigger: ACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACT...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACAACGGGAAGGCCTCGTaGCTCAGGTCTGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDNGKAS*LRSASS
Trigger: GCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTT...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACCCTTCACCCTCTTGTaGTTGGGGTCGAAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTPFTLL*LGSKGD
Trigger: GTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGATTCCCTTCACCCTCTaGTTGTTGGGGTCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: AMVPEPKTLTGLLSGRIGIPFTL*LLGSKG
Trigger: GCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAAT...CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGATTCCCTTCACCCTCTaGTTGTTGGGGTCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSIPFTL*LLGSKG
Trigger: GCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAAT...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACAGGGACCCAGGGCCATTaGGGACCTGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTGTQGH*GPVRMD
Trigger: ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCC...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 5 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRTGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 90 bp AGGACTTGTGTGCTCTCATGCCCTTCTGAGGTCATCACTCCACACTaGGCAGACCTTCTCTGTGGATGTTTTGAGGCAAAGCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RTCVLSCPSEVITPH*ADLLCGCFEAKPSS
Trigger: GCTGGAGGGCTTTGCCTCAAAACATCCACAGAGAAGGTCTGCGCAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCACACAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTATCCAGGCGCTGCCGGTaGGACGCGATGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLSRRCR*DAMKRP
Trigger: GGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGA...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCTCCAGGCGCTGCCGGTaGGACGCGATGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVSRRCR*DAMKRP
Trigger: GGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGA...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGAGCGGGTACAGAGTCTaGGTCTCTGCCGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPESGYRV*VSAGLS
Trigger: GCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCT...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371872.8
ENST00000439388.6
CDS-3UTR CAA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGAGGCCGAAGGCAAACTaGTCTGACACCTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLRPKAN*SDTSSQ
Trigger: TTGGGAGGAGGTGTCAGACAAGTTTGCCTTCGGCCT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACACCGCAGACCGTGGACTaGATTCCTGTCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LEAWKGLQAMVPEPKTLTPQTVD*IPVFSS
Trigger: GCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCGG...TGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ATGGGATGGGGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTATCATTCCTGCGCTGTaGAAGCCACAGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: MGWGMWSEPSVDSLHPLVIIPAL*KPQPRK
Trigger: CTTCCTGGGCTGTGGCTTCAACAGCGCAGGAATGAT...AACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTCTGGAACACGCAGCCTaGTCCAAGGAGTTCCTCGTG +
Preference number: 5 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWILEHAA*SKEFLV
Trigger: CACGAGGAACTCCTTGGACAAGGCTGCGTGTTCCAG...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ATGGGATGGGGCATGTGGTCTGAGCCCTCAGTAGATTCCCTTCACCCTCTTGTTATTCCCTTCACCCTCTaGTTGTTGGGGTCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: MGWGMWSEPSVDSLHPLVIPFTL*LLGSKG
Trigger: GCCCTTCGACCCCAACAACAAGAGGGTGAAGGGAAT...AACAAGAGGGTGAAGGGAATCTACTGAGGGCTCAGACCACATGCCCCATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS-3UTR CAA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGGGACCCAGGGCCATTaGGGACCTGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVGTQGH*GPVRMD
Trigger: ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGGACCCAGGGCCATTaGGGACCTGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: KGYKPWSLSPRHLQVCFLGTQGH*GPVRMD
Trigger: ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCC...CAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDTGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTTGACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 5 (lower is better)
Translates to: AWKGLQAMVPEPKTLTGLTGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...CAAACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TGGTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGTGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: WSLSPRHLQVCFLGGLGWCFLGG*GWIRDC
Trigger: GCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCA...CCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCTGAGTGCCCGTGTGTaGTGGACGCGGGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQALSARV*WTRAGG
Trigger: GCCCCCTGCCCGCGTCCACAACACACGGGCACTCAG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS GCA 90 bp AGGGCAGTGTCATTTGCTGAAGGACGTAGGACTTGTGTGCTCTCATaGCCTTCTGAGGTCATCACTCCACACTGCGCAGACCTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RAVSFAEGRRTCVLS*PSEVITPHCADLLC
Trigger: ACAGAGAAGGTCTGCGCAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGACACTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCGCGCGGTACCCTGCGTaGATGAGGCCGTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVARYPA*MRPCLA
Trigger: TGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGC...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp ACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGCCCAAACATGGGTACTTaGTCCTCCATGGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: TTGWAILVSVRIWFGGFRPNMGT*SSMVKH
Trigger: GTGCTTCACCATGGAGGACAAAGTACCCATGTTTGG...GCGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTACAGGATGGGCCATCTaGGTCTCTGTCCGTATCTGG +
Preference number: 5 (lower is better)
Translates to: SLSPRHLQVCFLGGLGWITGWAI*VSVRIW
Trigger: CCAGATACGGACAGAGACCAAGATGGCCCATCCTGT...AATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 5 (lower is better)
Translates to: VSDHRMGHLGLCPYLVWGKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...CCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCAGTGACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTGCACCTTCTAGAAGCTaGGAAAGGGCTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SVTTGWAILVSVRIWFGGAPSRS*ERATSH
Trigger: ATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGC...ACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCATCCAGGCGCTGCCGGTaGGACGCGATGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSRRCR*DAMKRP
Trigger: GGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGA...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGAGACAAGGCATCCCCTaGGAGGCGGAGGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPERQGIP*EAEVDR
Trigger: TCTGTCTACCTCCGCCTCCAAGGGGATGCCTTGTCT...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAATCATTCCTGCGCTGTaGAAGCCACAGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRIIPAL*KPQPRK
Trigger: CTTCCTGGGCTGTGGCTTCAACAGCGCAGGAATGAT...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACATCATTCCTGCGCTGTaGAAGCCACAGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDIIPAL*KPQPRK
Trigger: CTTCCTGGGCTGTGGCTTCAACAGCGCAGGAATGAT...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TCTGTCCGTATCTGGTTTGGGGGTTTTCGCAGGACTAGGCCTAGGCTAAGGACACCAAACATGGGTACTTaGTCCTCCATGGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: SVRIWFGGFRRTRPRLRTPNMGT*SSMVKH
Trigger: GTGCTTCACCATGGAGGACAAAGTACCCATGTTTGG...TGTCCTTAGCCTAGGCCTAGTCCTGCGAAAACCCCCAAACCAGATACGGACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGATTCACCCTCTTGTTGTaGGGGTCGAAGGGCGACTTC +
Preference number: 5 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRFTLLL*GSKGDF
Trigger: GAAGTCGCCCTTCGACCCCAACAACAAGAGGGTGAA...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTCTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 5 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GACCACAGGATGGGCCATCTTGGTCTCTGTCCGTATCTGGTTTGGGGGTTTTCGAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 5 (lower is better)
Translates to: DHRMGHLGLCPYLVWGFSKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...CGAAAACCCCCAAACCAGATACGGACAGAGACCAAGATGGCCCATCCTGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACCCAATGACCACCACGTaGGCCGTGCTGGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVSLFLQKLKQFLAQSSHPMTTT*AVLGRG
Trigger: GCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGG...GTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACACACTCCTGCACAGTaGACCACGCAGGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLHTPAQ*TTQGVW
Trigger: CCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGTG...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCAGCACGGGGACCCTGTaGATGGCGCCTTCAATGTGC +
Preference number: 5 (lower is better)
Translates to: QVFTKHLLEAWKGLQAMVSTGTL*MAPSMC
Trigger: GCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCT...GACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGACTGTCCGTATCTGGTTaGGGGGTTTTCGCAGGACTA +
Preference number: 5 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRLSVSG*GVFAGL
Trigger: TAGTCCTGCGAAAACCCCCAAACCAGATACGGACAG...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGATGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: LSPRHLQVCFLGGLGWIRCFLGG*GWIRDC
Trigger: GCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCA...TCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp GTCCCTGAGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATAAGACACTTACAGGTTaGCTTTCTGGGAGGATTGGG +
Preference number: 5 (lower is better)
Translates to: VPEPKTLTGLLSGRIGVDKTLTG*LSGRIG
Trigger: CCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTT...ATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGCCCAAGACACTTACAGGTTGCACCTTCTAGAAGCTaGGAAAGGGCTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: KLGKGYKPWSLSPRHLQVAPSRS*ERATSH
Trigger: ATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGC...AACCTGTAAGTGTCTTGGGCTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CGTGGGGCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACGAAACAGGGAGCTCTaGTCAGCTGCAGTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: RGAYQVFTKHLLEAWKGLRNREL*SAAVPL
Trigger: GAGGGGCACTGCAGCTGACAAGAGCTCCCTGTTTCG...TAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439388.6
CDS-3UTR CAA 90 bp GTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAAGCGGGTACAGAGTCTaGGTCTCTGCCGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VSLFLQKLKQFLAQSSHSSGYRV*VSAGLS
Trigger: GCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCT...TGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGCGCTGCAGCAGCTGGTaGGGAGGGCAGTGTCATTTG +
Preference number: 5 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVRCSSW*GGQCHL
Trigger: CAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCG...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp ATGCATATACACATAGAACAGGGCTGCAGGGCTGCCCTAACCCCAGAAGCTGCCTGCCCAGCCATTTGTTaGTTTATTGTATGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: MHIHIEQGCRAALTPEAACPAIC*FIVCLS
Trigger: GGAGAGACATACAATAAACAAACAAATGGCTGGGCA...GGCAGCTTCTGGGGTTAGGGCAGCCCTGCAGCCCTGTTCTATGTGTATATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCCCCTTCACCCTCTTGTaGTTGGGGTCGAAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAPFTLL*LGSKGD
Trigger: GTCGCCCTTCGACCCCAACAACAAGAGGGTGAAGGG...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTCCATGTGTGAGACAAGGCATCCCCTaGGAGGCGGAGGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: QKLKQFLAQSSHSVVPCVRQGIP*EAEVDR
Trigger: TCTGTCTACCTCCGCCTCCAAGGGGATGCCTTGTCT...CACACATGGAACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCGGGACCCAGGGCCATTaGGGACCTGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQAGTQGH*GPVRMD
Trigger: ATCCATTCTCACAGGTCCCAAATGGCCCTGGGTCCC...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp TTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCATGGTCCCTGAGGCACCTTCTAGAAGCTaGGAAAGGGCTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: FTKHLLEAWKGLQAMVPEAPSRS*ERATSH
Trigger: ATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGC...CTCAGGGACCATGGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp AGCCCAAGACACTTACAGGTTTGCTTTCTGGGAGGATTGGGGTGGATTAGAGACCCAAACATGGGTACTTaGCTGGAAGAAGCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SPRHLQVCFLGGLGWIRDPNMGT*LEEAVE
Trigger: CTCTACTGCTTCTTCCAGCAAAGTACCCATGTTTGG...GTCTCTAATCCACCCCAATCCTCCCAGAAAGCAAACCTGTAAGTGTCTTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS-3UTR CAA 90 bp TTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCCACACCATACGCCTaGCCCAGCGACATGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LVSLFLQKLKQFLAQSSHSTPYA*PSDMSL
Trigger: GAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGA...GTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAGGGAAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCAGGCCGAAGGCAAACTaGTCTGACACCTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQARPKAN*SDTSSQ
Trigger: TTGGGAGGAGGTGTCAGACAAGTTTGCCTTCGGCCT...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CCCAGAGTCAGGGACTTTTATCTTAGTTTCCCTCTTTCTCCAGAAATTAAAGCAGCCCTGGGTCTGTATTaGACTGCCTCCTCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: PRVRDFYLSFPLSPEIKAALGLY*TASSQK
Trigger: CTTTTGGGAGGAGGCAGTCAAATACAGACCCAGGGC...TGCTTTAATTTCTGGAGAAAGAGGGAAACTAAGATAAAAGTCCCTGACTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp GCTTATCAAGTATTTACTAAGCACCTTCTAGAAGCTTGGAAAGGGCTACAAGCCTGCTTTCTGGGAGGATaGGGGTGGATTAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: AYQVFTKHLLEAWKGLQACFLGG*GWIRDC
Trigger: GCAGTCTCTAATCCACCCCAATCCTCCCAGAAAGCA...GGCTTGTAGCCCTTTCCAAGCTTCTAGAAGGTGCTTAGTAAATACTTGATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS-3UTR CAA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTGGAGGGCAGTGTCATTaGCTGAAGGACGTAGGACTT +
Preference number: 5 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVGGQCH*LKDVGL
Trigger: AAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCC...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS-3UTR CAA 90 bp CTCTTTCTCCAGAAATTAAAGCAGTTTTTAGCCCAAAGTAGCCACTCAGTCGTTACCGTGCCCAGCCATTaGTTTGTTTATTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: LFLQKLKQFLAQSSHSVVTVPSH*FVYCMS
Trigger: AGACATACAATAAACAAACAAATGGCTGGGCACGGT...AACGACTGAGTGGCTACTTTGGGCTAAAAACTGCTTTAATTTCTGGAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS GCA 72 bp AAGCACACCAGGCGCCGGCGGAGGCCTGCGGCCCGCTaGTGCTCCAGGGCCTCCCTCCCCAGGAAGGGCACC +
Preference number: 6 (lower is better)
Translates to: KHTRRRRRPAAR*CSRASLPRKGT
Trigger: GGTGCCCTTCCTGGGGAGGGAGGCCCTGGAGCAGCAGCGGGCCGCAGGCCTCCGCCGGCGCCTGGTGTGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 72 bp CACGTTGGCCGTGCTGGGCAGGGGCCGGCTTGGGCCTaGGGCCACCACCGAGGTGCCCTGTCCCTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: HVGRAGQGPAWA*GHHRGALSLLQ
Trigger: CTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CATGGCCCCATGCCCCGGGTAGGGCTCTGGCGAGGGTaGGCAGCAGCCACACGTAGGGCTCGGCTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: HGPMPRVGLWRG*AAATRRARLSE
Trigger: CTCACTGAGCCGAGCCCTACGTGTGGCTGCTGCCCACCCTCGCCAGAGCCCTACCCGGGGCATGGGGCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp GCCGAGTGTGGGCCAGAAGCTCCACCTCCACGTCACTaGGCCGCAGCTGCCACAGCAGGCCTGCCGTGTGCC +
Preference number: 6 (lower is better)
Translates to: AECGPEAPPPRH*AAAATAGLPCA
Trigger: GGCACACGGCAGGCCTGCTGTGGCAGCTGCGGCCCAGTGACGTGGAGGTGGAGCTTCTGGCCCACACTCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CCCTCGGAGAGCCCTGCACTGAGTGCCCGTGTGTTGTaGACGCGGGCAGGGGGCCCCCATGAGGTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: PSESPALSARVL*TRAGGPHEVQA
Trigger: TGCCTGGACCTCATGGGGGCCCCCTGCCCGCGTCCACAACACACGGGCACTCAGTGCAGGGCTCTCCGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CAA 72 bp CTGCCCTCGGAGAGCCCTGCACTGAGTGCCCGTGTGTaGTGGACGCGGGCAGGGGGCCCCCATGAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: LPSESPALSARV*WTRAGGPHEVQ
Trigger: CTGGACCTCATGGGGGCCCCCTGCCCGCGTCCACAACACACGGGCACTCAGTGCAGGGCTCTCCGAGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CAA 90 bp AATGACCACCACGTTGGCCGTGCTGGGCAGGGGCCGGCTTGGGCCTaGGGCCACCACCGAGGTGCCCTGTCCCTCCTTCAGGGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: NDHHVGRAGQGPAWA*GHHRGALSLLQGPL
Trigger: CAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGGTCATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp TACAGGGTCTGGCAGCCCAAGCTGCCTCCACCAATGACCACCACGTaGGCCGTGCTGGGCAGGGGCCGGCTTGGGCCTTGGGCCACCACC +
Preference number: 6 (lower is better)
Translates to: YRVWQPKLPPPMTTT*AVLGRGRLGPWATT
Trigger: GGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTGGTCATTGGTGGAGGCAGCTTGGGCTGCCAGACCCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp GCAGGGGCCGGCTTGGGCCTTGGGCCACCACCGAGGTaGCCTGTCCCTCCTTCAGGGTCCGCTGATATGGCA +
Preference number: 6 (lower is better)
Translates to: AGAGLGLGPPPR*PVPPSGSADMA
Trigger: TGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp GCGGGAAGGCGAAGGTGTACTCGTCTGCCAGCAGCCTaGGGTAGGCGTAGTCCTCGTGCGCGCGGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: AGRRRCTRLPAA*GRRSPRARGSR
Trigger: ACGGGAGCCGCGCGCACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTCGCCTTCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp TCCAGGGCCTCCCTCCCCAGGAAGGGCACCGGCGACTaGAGCTTGCAGGTGAAGGCCAGGCCTGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRASLPRKGTGD*SLQVKARPASR
Trigger: CCTGGAGGCAGGCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTTCCTGGGGAGGGAGGCCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 90 bp CTCAGGGAGTCGATGGCGCGGTACCCTGCGTTGATGAGGCCGTGCTaGGCACCCGCGGCCATCACAGCCCGGTACACAGGCACGCAGGAC +
Preference number: 6 (lower is better)
Translates to: LRESMARYPALMRPC*APAAITARYTGTQD
Trigger: GTCCTGCGTGCCTGTGTACCGGGCTGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTCCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp GTCGTGGTGGGGCGGGAAGGCGAAGGTGTACTCGTCTaGCAGCAGCCTGCGGTAGGCGTAGTCCTCGTGCGC +
Preference number: 6 (lower is better)
Translates to: VVVGREGEGVLV*QQPAVGVVLVR
Trigger: GCGCACGAGGACTACGCCTACCGCAGGCTGCTGGCAGACGAGTACACCTTCGCCTTCCCGCCCCACCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CCTCGGAGCTCAGGTGCCTCCCCCATCAGGGGCTTGTaGTCGGGCGTGAAGGATTCAGGGCCGCAGACCGTG +
Preference number: 6 (lower is better)
Translates to: PRSSGASPIRGL*SGVKDSGPQTV
Trigger: CACGGTCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp TGTGGGACCAGTTGTGCTGGGCCACGGCCCCGCCCATaGCCAGGTAGTAACCGTCCCCTTCAAAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: CGTSCAGPRPRP*PGSNRPLQRRG
Trigger: CCCCCGCCTTTGAAGGGGACGGTTACTACCTGGCCATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 90 bp GCCAGGCGGCTGACAGTCAGGTCACTCTCGGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACGGTGGAGCCTGGGGGTCGGCTGACA +
Preference number: 6 (lower is better)
Translates to: ARRLTVRSLSVPPRW*SMHVYTVEPGGRLT
Trigger: TGTCAGCCGACCCCCAGGCTCCACCGTGTACACGTGCATGCTCAACCACCGTGGGGGCACCGAGAGTGACCTGACTGTCAGCCGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 90 bp CACCCGCGGCCATCACAGCCCGGTACACAGGCACGCAGGACGCCTTaGGAATGTGCAGCTCCCAGCCCAGCTCCCCCACAAAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: HPRPSQPGTQARRTP*ECAAPSPAPPQRTA
Trigger: GGCTGTCCTTTGTGGGGGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGCCTGTGTACCGGGCTGTGATGGCCGCGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp GAGTCGATGGCGCGGTACCCTGCGTTGATGAGGCCGTaGTTGGCACCCGCGGCCATCACAGCCCGGTACACA +
Preference number: 6 (lower is better)
Translates to: ESMARYPALMRP*LAPAAITARYT
Trigger: TGTGTACCGGGCTGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp CCCTGGCGAGGGTGGTACAGGTGCCAGCGGGGTCCATaGTACCGTCGTGCGGCACATACAGGGTCCCGTAGA +
Preference number: 6 (lower is better)
Translates to: PWRGWYRCQRGP*YRRAAHTGSRR
Trigger: TCTACGGGACCCTGTATGTGCCGCACGACGGTACCATGGACCCCGCTGGCACCTGTACCACCCTCGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CACTGGGACTTCTGGTCCTGCAGCACGGTGGTGATGTaGGACCAGTTGTGCTGGGCCACGGCCCCGCCCATG +
Preference number: 6 (lower is better)
Translates to: HWDFWSCSTVVM*DQLCWATAPPM
Trigger: CATGGGCGGGGCCGTGGCCCAGCACAACTGGTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp GCAGTAGAGAAAGCTGGGGCCCCAGAAACCGCAGGGTaGGGACGCGTCCACAGCGGCCTGGAGGAGAATGGG +
Preference number: 6 (lower is better)
Translates to: AVEKAGAPETAG*GRVHSGLEENG
Trigger: CCCATTCTCCTCCAGGCCGCTGTGGACGCGTCCCCACCCTGCGGTTTCTGGGGCCCCAGCTTTCTCTACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469828.1
CDS CAA 72 bp AACCCTCGGAGCTCAGGTGCCTCCCCCATCAGGGGCTaGTGGTCGGGCGTGAAGGATTCAGGGCCGCAGACC +
Preference number: 6 (lower is better)
Translates to: NPRSSGASPIRG*WSGVKDSGPQT
Trigger: GGTCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp CCAAGGAGTTCCTCGTGCAGCGGGTCTCTCCTCATGTaGCGCCCGGCCAGCGGCTCATCGTGGGGGAAGACG +
Preference number: 6 (lower is better)
Translates to: PRSSSCSGSLLM*RPASGSSWGKT
Trigger: CGTCTTCCCCCACGATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCCGCTGCACGAGGAACTCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp CCCAGGAAGAACCCTCGGAGCTCAGGTGCCTCCCCCATCAGGGGCTaGTGGTCGGGCGTGAAGGATTCAGGGCCGCAGACCGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: PRKNPRSSGASPIRG*WSGVKDSGPQTVDL
Trigger: CAAGTCCACGGTCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGAGGCACCTGAGCTCCGAGGGTTCTTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp GACAGCCGCATGGCTCGGACCAGGTGCCCTGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAGGCCTCGTTGCTCAGGTCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: DSRMARTRCPAALSS*WVENGKASLLRSAS
Trigger: GGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCATGCGGCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp GCAGTTCTCAATGACCTGTGCTCCTCGGGCAGAAGCTaGCCTGGCGAGGGTGGTACAGGTGCCAGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: AVLNDLCSSGRS*PGEGGTGASGV
Trigger: GACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAGCTTCTGCCCGAGGAGCACAGGTCATTGAGAACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp CAAGGAGTTCCTCGTGCAGCGGGTCTCTCCTCATGTTaGGCCCGGCCAGCGGCTCATCGTGGGGGAAGACGA +
Preference number: 6 (lower is better)
Translates to: QGVPRAAGLSSC*ARPAAHRGGRR
Trigger: TCGTCTTCCCCCACGATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCCGCTGCACGAGGAACTCCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp GCCCGGTACACAGGCACGCAGGACGCCTTTGGAATGTaGAGCTCCCAGCCCAGCTCCCCCACAAAGGACAGC +
Preference number: 6 (lower is better)
Translates to: ARYTGTQDAFGM*SSQPSSPTKDS
Trigger: GCTGTCCTTTGTGGGGGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGCCTGTGTACCGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp CGAGGTGCCCTGTCCCTCCTTCAGGGTCCGCTGATATaGCACACTCTTCTCGGCTGTGGGGCCAGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: RGALSLLQGPLI*HTLLGCGASCA
Trigger: AGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CGCTGCCGGTTGGACGCGATGAAGAGGCCCCCATTCTaGATCCAGCCCGTGTGTAGTCCCGTCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RCRLDAMKRPPF*IQPVCSPVSSS
Trigger: GGAGGAGGAGACGGGACTACACACGGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CGGCTGACAGTCAGGTCACTCTCGGTGCCCCCACGGTaGTTGAGCATGCACGTGTACACGGTGGAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RLTVRSLSVPPR*LSMHVYTVEPG
Trigger: CCCAGGCTCCACCGTGTACACGTGCATGCTCAACCACCGTGGGGGCACCGAGAGTGACCTGACTGTCAGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp CTGGATGCACCCAAGGTGGGGAACGACAGGGAGAGGTaGTTACCCAGGACCTCAGCCAGGGCTGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LDAPKVGNDRER*LPRTSARAAPW
Trigger: CCAGGGAGCAGCCCTGGCTGAGGTCCTGGGTAACCACCTCTCCCTGTCGTTCCCCACCTTGGGTGCATCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CCA 72 bp GCAGTAGAGAAAGCTGGGGCCCCAGAAACCGCAGGGTaGGGACGCGTCCACAGCGGCTCCTCCATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: AVEKAGAPETAG*GRVHSGSSMVK
Trigger: CTTCACCATGGAGGAGCCGCTGTGGACGCGTCCCCACCCTGCGGTTTCTGGGGCCCCAGCTTTCTCTACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CCA 72 bp CAGCAGCCACACGTAGGGCTCGGCTCAGTGAGGCCATaGGGGCTCCAGGCCTCAGCGAAACAGGGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: QQPHVGLGSVRP*GLQASAKQGAL
Trigger: AAGAGCTCCCTGTTTCGCTGAGGCCTGGAGCCCCCATGGCCTCACTGAGCCGAGCCCTACGTGTGGCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp GACCGGCCCACCGCTGGGGTCATGGATGTAACCGTGGCGATGGTCTaGTCGATGGCGAACCCAAAGTCAGCCCTCCGGACATGGCCCACC +
Preference number: 6 (lower is better)
Translates to: DRPTAGVMDVTVAMV*SMANPKSALRTWPT
Trigger: GGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCACGGTTACATCCATGACCCCAGCGGTGGGCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS TCA 72 bp ACCACCGAGGTGCCCTGTCCCTCCTTCAGGGTCCGCTaGTATGGCACACTCTTCTCGGCTGTGGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: TTEVPCPSFRVR*YGTLFSAVGPA
Trigger: AGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAAGGAGGGACAGGGCACCTCGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS TCA 72 bp CGACATAGGCATGGTGCATGGCCACCAGCGGGACCTTaGCTCCAGCCATCCGGCCCACAGCACTTGCCCACA +
Preference number: 6 (lower is better)
Translates to: RHRHGAWPPAGP*LQPSGPQHLPT
Trigger: TGTGGGCAAGTGCTGTGGGCCGGATGGCTGGAGTCAAGGTCCCGCTGGTGGCCATGCACCATGCCTATGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS TCA 72 bp CATAGCCATGCATGTCCTTCTCCGGGCGCCCATGGATaGTCCAGTGGGCCAGCTCCTGCCCACAGCCACCAC +
Preference number: 6 (lower is better)
Translates to: HSHACPSPGAHG*SSGPAPAHSHH
Trigger: GTGGTGGCTGTGGGCAGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGGAGAAGGACATGCATGGCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp CCCAGCGACATGAGCCTCTTGTACTCGTCCAGGCGCTaGCGGTTGGACGCGATGAAGAGGCCCCCATTCTGG +
Preference number: 6 (lower is better)
Translates to: PSDMSLLYSSRR*RLDAMKRPPFW
Trigger: CCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp CGTGTACACGGTGGAGCCTGGGGGTCGGCTGACATCTaGGGAGAAGAGCCAGTCGGCAGCCTTCCTTGCATC +
Preference number: 6 (lower is better)
Translates to: RVHGGAWGSADI*GEEPVGSLPCI
Trigger: GATGCAAGGAAGGCTGCCGACTGGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCTCCACCGTGTACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp GTGGGTGGAGAACGGGAAGGCCTCGTTGCTCAGGTCTaGGTCCAGCACCTCCTGCAAAATGGCTCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: VGGEREGLVAQV*VQHLLQNGSAG
Trigger: GCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp AGTCCTGGACCTGGCAGTGGCACGAAGCCAGGCAGGTaGGTGGGCTCCAGAGTCCAGCTTTTCTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: SPGPGSGTKPGR*VGSRVQLFCHC
Trigger: GCAGTGGCAGAAAAGCTGGACTCTGGAGCCCACGCACCTGCCTGGCTTCGTGCCACTGCCAGGTCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS GCA 72 bp GGCCTCAGCGAAACAGGGAGCTCTTGTCAGCTGCAGTaGCCCTCGGCCCTAAGAGTGCTTGGCCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GLSETGSSCQLQ*PSALRVLGPAE
Trigger: CTCTGCTGGGCCAAGCACTCTTAGGGCCGAGGGGCACTGCAGCTGACAAGAGCTCCCTGTTTCGCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp GGGTCCTGGGGCAGAGGACCTCCTCTTTGGATGGTGTaGCTTGCCCAGTGGCCTGAGCTAGGGCTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: GSWGRGPPLWMV*LAQWPELGLCS
Trigger: TGAGCACAGCCCTAGCTCAGGCCACTGGGCAAGCCACACCATCCAAAGAGGAGGTCCTCTGCCCCAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 72 bp TCAGGGTCCGCTGATATGGCACACTCTTCTCGGCTGTaGGGCCAGCTGCGCTGGACAGGTTGCATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: SGSADMAHSSRL*GQLRWTGCMAP
Trigger: TGGGGCCATGCAACCTGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298628.6
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp GGACCAGGTGCCCTGCGGCTCTCAGTAGCTTGTGGGTaGAGAACGGGAAGGCCTCGTTGCTCAGGTCTGCGT +
Preference number: 6 (lower is better)
Translates to: GPGALRLSVACG*RTGRPRCSGLR
Trigger: ACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp GCTCGGACCAGGTGCCCTGCGGCTCTCAGTAGCTTGTaGGTGGAGAACGGGAAGGCCTCGTTGCTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ARTRCPAALSSL*VENGKASLLRS
Trigger: AGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 72 bp TCGCTCCCAGCCATGCCGCTCCTGGAACACGCAGCCTaGTCCAAGGAGTTCCTCGTGCAGCGGGTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SLPAMPLLEHAA*SKEFLVQRVSP
Trigger: AGGAGAGACCCGCTGCACGAGGAACTCCTTGGACAAGGCTGCGTGTTCCAGGAGCGGCATGGCTGGGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp CTGACAGTCAGGTCACTCTCGGTGCCCCCACGGTGGTaGAGCATGCACGTGTACACGGTGGAGCCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LTVRSLSVPPRW*SMHVYTVEPGG
Trigger: ACCCCCAGGCTCCACCGTGTACACGTGCATGCTCAACCACCGTGGGGGCACCGAGAGTGACCTGACTGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 72 bp ATGGCTCGGACCAGGTGCCCTGCGGCTCTCAGTAGCTaGTGGGTGGAGAACGGGAAGGCCTCGTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: MARTRCPAALSS*WVENGKASLLR
Trigger: CCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 72 bp CCATCACAGCCCGGTACACAGGCACGCAGGACGCCTTaGGAATGTGCAGCTCCCAGCCCAGCTCCCCCACAA +
Preference number: 6 (lower is better)
Translates to: PSQPGTQARRTP*ECAAPSPAPPQ
Trigger: TTGTGGGGGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGCCTGTGTACCGGGCTGTGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CAA 90 bp TTGCCCAGCGACATGAGCCTCTTGTACTCGTCCAGGCGCTGCCGGTaGGACGCGATGAAGAGGCCCCCATTCTGGATCCAGCCCGTGTGT +
Preference number: 6 (lower is better)
Translates to: LPSDMSLLYSSRRCR*DAMKRPPFWIQPVC
Trigger: ACACACGGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp CCTGCGGCTCTCAGTAGCTTGTGGGTGGAGAACGGGAAGGCCTCGTaGCTCAGGTCTGCGTCCAGCACCTCCTGCAAAATGGCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: PAALSSLWVENGKAS*LRSASSTSCKMARL
Trigger: CAGCCGAGCCATTTTGCAGGAGGTGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp AAGGCCTCGTTGCTCAGGTCTGCGTCCAGCACCTCCTaGAAAATGGCTCGGCTGGCTGGGCCCTGGATACTG +
Preference number: 6 (lower is better)
Translates to: KASLLRSASSTS*KMARLAGPWIL
Trigger: CAGTATCCAGGGCCCAGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGCAGACCTGAGCAACGAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp TTTCTCAATGCTCAGGGAGTCGATGGCGCGGTACCCTaGGTTGATGAGGCCGTGCTTGGCACCCGCGGCCAT +
Preference number: 6 (lower is better)
Translates to: FLNAQGVDGAVP*VDEAVLGTRGH
Trigger: ATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTCCCTGAGCATTGAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp AGGTGCGTGGGCTCCAGAGTCCAGCTTTTCTGCCACTaGCTTGGCCTCCCTGGGATCTGCCCCCATCAGACA +
Preference number: 6 (lower is better)
Translates to: RCVGSRVQLFCH*LGLPGICPHQT
Trigger: TGTCTGATGGGGGCAGATCCCAGGGAGGCCAAGGCAGTGGCAGAAAAGCTGGACTCTGGAGCCCACGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CCA 72 bp TATATCTCGCCCAAGGGCACAGACAAGTCCTGGACCTaGCAGTGGCACGAAGCCAGGCAGGTGCGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: YISPKGTDKSWT*QWHEARQVRGL
Trigger: GAGCCCACGCACCTGCCTGGCTTCGTGCCACTGCCAGGTCCAGGACTTGTCTGTGCCCTTGGGCGAGATATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CAA 72 bp TCCACACCATACGCCTTGCCCAGCGACATGAGCCTCTaGTACTCGTCCAGGCGCTGCCGGTTGGACGCGATG +
Preference number: 6 (lower is better)
Translates to: STPYALPSDMSL*YSSRRCRLDAM
Trigger: CATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS TCA 72 bp TCTTGTACTCGTCCAGGCGCTGCCGGTTGGACGCGATaGAGAGGCCCCCATTCTGGATCCAGCCCGTGTGTA +
Preference number: 6 (lower is better)
Translates to: SCTRPGAAGWTR*RGPHSGSSPCV
Trigger: TACACACGGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp GAGCTGTCGATGAGCTGGCACTGGGACTTCTGGTCCTaGAGCACGGTGGTGATGTGGGACCAGTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: ELSMSWHWDFWS*STVVMWDQLCW
Trigger: CCAGCACAACTGGTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp GAGAAAAACGCAGCAGTCACCACAGCTCCAGGGCAGTaGCCGGGTAGCCCACACTTCTCCTGTCCCTGCACT +
Preference number: 6 (lower is better)
Translates to: EKNAAVTTAPGQ*PGSPHFSCPCT
Trigger: AGTGCAGGGACAGGAGAAGTGTGGGCTACCCGGCCACTGCCCTGGAGCTGTGGTGACTGCTGCGTTTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298628.6
CDS CCA 72 bp GCGGCTCATCGTGGGGGAAGACGACGGAGTAGTTCTTaGCGTAGGACTCATGGCTTCGCTCTCGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: AAHRGGRRRSSS*RRTHGFALGSS
Trigger: GCTGGATCCGAGAGCGAAGCCATGAGTCCTACGCCAAGAACTACTCCGTCGTCTTCCCCCACGATGAGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CTGATCATACCCAGGTCCTCGGAGCTGTCGATGAGCTaGCACTGGGACTTCTGGTCCTGCAGCACGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LIIPRSSELSMS*HWDFWSCSTVV
Trigger: CACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTCCGAGGACCTGGGTATGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp AACCCAAAGTCAGCCCTCCGGACATGGCCCACCACTTaGCCGTTCCTCCAGATGGCCTCCAGGCCAAACATG +
Preference number: 6 (lower is better)
Translates to: NPKSALRTWPTT*PFLQMASRPNM
Trigger: CATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
ENST00000469828.1
CDS CCA 72 bp GCCCACCGCTGGGGTCATGGATGTAACCGTAGGCGATaGTCTTGTCGATGGCGAACCCAAAGTCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AHRWGHGCNRRR*SCRWRTQSQPS
Trigger: GGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCTACGGTTACATCCATGACCCCAGCGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
ENST00000469828.1
CDS CCA 72 bp TTGTCAGCTGCAGTGCCCCTCGGCCCTAAGAGTGCTTaGCCCAGCAGAGGTGCCTTCACCTTCTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: LSAAVPLGPKSA*PSRGAFTFLLP
Trigger: GGGAAGCAAGAAGGTGAAGGCACCTCTGCTGGGCCAAGCACTCTTAGGGCCGAGGGGCACTGCAGCTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp GACATGAGCCTCTTGTACTCGTCCAGGCGCTGCCGGTaGGACGCGATGAAGAGGCCCCCATTCTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: DMSLLYSSRRCR*DAMKRPPFWIQ
Trigger: CTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACGAGTACAAGAGGCTCATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp TCGGGCGTGAAGGATTCAGGGCCGCAGACCGTGGACTaGATTCCTGTCTTCTCCAGCACGGGGACCCTGTTG +
Preference number: 6 (lower is better)
Translates to: SGVKDSGPQTVD*IPVFSSTGTLL
Trigger: CAACAGGGTCCCCGTGCTGGAGAAGACAGGAATCAAGTCCACGGTCTGCGGCCCTGAATCCTTCACGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp GAACCCAAAGTCAGCCCTCCGGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGCCTCCAGGCCAAACAT +
Preference number: 6 (lower is better)
Translates to: EPKVSPPDMAHH*AVPPDGLQAKH
Trigger: ATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
ENST00000469828.1
CDS CAA 90 bp GTCGATGGCGAACCCAAAGTCAGCCCTCCGGACATGGCCCACCACTaGGCCGTTCCTCCAGATGGCCTCCAGGCCAAACATGGGTACTTT +
Preference number: 6 (lower is better)
Translates to: VDGEPKVSPPDMAHH*AVPPDGLQAKHGYF
Trigger: AAAGTACCCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
ENST00000469828.1
CDS TCA 72 bp CATTGGGCATGTTCTGAATCCCCTCGATGCGCTCGGTaGCGACATAGGCATGGTGCATGGCCACCAGCGGGA +
Preference number: 6 (lower is better)
Translates to: HWACSESPRCAR*RHRHGAWPPAG
Trigger: TCCCGCTGGTGGCCATGCACCATGCCTATGTCGTCACCGAGCGCATCGAGGGGATTCAGAACATGCCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371867.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp ATGGTGTGGCTTGCCCAGTGGCCTGAGCTAGGGCTGTaGTCACCCAACAGGGTGACGAATGAGCTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: MVWLAQWPELGL*SPNRVTNELKR
Trigger: CCTCTTGAGCTCATTCGTCACCCTGTTGGGTGAGCACAGCCCTAGCTCAGGCCACTGGGCAAGCCACACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 72 bp GGGTACAGAGTCTTGGTCTCTGCCGGGCTCAGCACATaGGATTCCACACCATACGCCTTGCCCAGCGACATG +
Preference number: 6 (lower is better)
Translates to: GYRVLVSAGLST*DSTPYALPSDM
Trigger: CATGTCGCTGGGCAAGGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp TCCGGACATGGCCCACCACTTGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGGGTACTTTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SGHGPPLGRSSR*PPGQTWVLCPP
Trigger: TGGAGGACAAAGTACCCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS CCA 72 bp CATGGGTACTTTGCTGGAAGAAGCAGTAGAGAAAGCTaGGGCCCCAGAAACCGCAGGGTGGGGACGCGTCCA +
Preference number: 6 (lower is better)
Translates to: HGYFAGRSSRES*GPRNRRVGTRP
Trigger: TGGACGCGTCCCCACCCTGCGGTTTCTGGGGCCCCAGCTTTCTCTACTGCTTCTTCCAGCAAAGTACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371868.5
ENST00000469828.1
CDS CCA 72 bp TCCGGACATGGCCCACCACTTGGCCGTTCCTCCAGATaGCCTCCAGGCCAAACATGGGTACTTTGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SGHGPPLGRSSR*PPGQTWVLCWK
Trigger: CTTCCAGCAAAGTACCCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371868.5
ENST00000469828.1
CDS CAA 72 bp ACCGCTGGGGTCATGGATGTAACCGTGGCGATGGTCTaGTCGATGGCGAACCCAAAGTCAGCCCTCCGGACA +
Preference number: 6 (lower is better)
Translates to: TAGVMDVTVAMV*SMANPKSALRT
Trigger: TGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCACGGTTACATCCATGACCCCAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422262.6
CDS CAA 90 bp CAGACCGTGGACTTGATTCCTGTCTTCTCCAGCACGGGGACCCTGTaGATGGCGCCTTCAATGTGCTGGGTGAACACCTCCCAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QTVDLIPVFSSTGTL*MAPSMCWVNTSQSR
Trigger: CCTGGACTGGGAGGTGTTCACCCAGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCTGGAGAAGACAGGAATCAAGTCCACGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS CAA 90 bp CAGGGGAAATGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTaGCTGAAGGACGTAGGACTTGTGTGCTCTCATGCCCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: QGKCRCSSWLGGQCH*LKDVGLVCSHALLR
Trigger: CCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCATTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS GCA 72 bp TGGCCCAAGTTCTCCCAGGAGTCCTGGACGTGCAAGTaGATGGGAGAAAAACGCAGCAGTCACCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: WPKFSQESWTCK*MGEKRSSHHSS
Trigger: GGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS GCA 72 bp GGAGTGTGGCCCAAGTTCTCCCAGGAGTCCTGGACGTaGAAGTGCATGGGAGAAAAACGCAGCAGTCACCAC +
Preference number: 6 (lower is better)
Translates to: GVWPKFSQESWT*KCMGEKRSSHH
Trigger: GTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCACACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS GCA 72 bp GACATCTGCGGAGAAGAGCCAGTCGGCAGCCTTCCTTaGATCCAGCCCCACCAGGTAGAACTTCCCGAAGTA +
Preference number: 6 (lower is better)
Translates to: DICGEEPVGSLP*IQPHQVELPEV
Trigger: TACTTCGGGAAGTTCTACCTGGTGGGGCTGGATGCAAGGAAGGCTGCCGACTGGCTCTTCTCCGCAGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS GCA 72 bp TCAGTAGCTTGTGGGTGGAGAACGGGAAGGCCTCGTTaGTCAGGTCTGCGTCCAGCACCTCCTGCAAAATGG +
Preference number: 6 (lower is better)
Translates to: SVACGWRTGRPR*SGLRPAPPAKW
Trigger: CCATTTTGCAGGAGGTGCTGGACGCAGACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000422262.6
ENST00000439388.6
CDS GCA 72 bp GCCCCTGCGGGAAGCGTCTTACACTCCTACCAGGTGTaGCCCTTTCTACAGATGAGGAAAGTGAGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: APAGSVLHSYQV*PFLQMRKVRRR
Trigger: TCTGCGCCTCACTTTCCTCATCTGTAGAAAGGGGCACACCTGGTAGGAGTGTAAGACGCTTCCCGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371868.5
CDS CCA 72 bp CCAAGTTCTCCCAGGAGTCCTGGACGTGCAAGTGCATaGGAGAAAAACGCAGCAGTCACCACAGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PSSPRSPGRASA*EKNAAVTTAPG
Trigger: CCCTGGAGCTGTGGTGACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS CCA 72 bp GGTCATGGATGTAACCGTAGGCGATGGTCTTGTCGATaGCGAACCCAAAGTCAGCCCTCCGGACATGGCCCA +
Preference number: 6 (lower is better)
Translates to: GHGCNRRRWSCR*RTQSQPSGHGP
Trigger: TGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGACCATCGCCTACGGTTACATCCATGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371868.5
ENST00000371872.8
ENST00000439388.6
ENST00000469828.1
CDS CAA 72 bp TGCCGCTGCAGCAGCTGGTTGGGAGGGCAGTGTCATTaGCTGAAGGACGTAGGACTTGTGTGCTCTCATGCC +
Preference number: 6 (lower is better)
Translates to: CRCSSWLGGQCH*LKDVGLVCSHA
Trigger: GGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGACACTGCCCTCCCAACCAGCTGCTGCAGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS CAA 90 bp ACTTGGCCGTTCCTCCAGATGGCCTCCAGGCCAAACATGGGTACTTaGCTGGAAGAAGCAGTAGAGAAAGCTGGGGCCCCAGAAACCGCA +
Preference number: 6 (lower is better)
Translates to: TWPFLQMASRPNMGT*LEEAVEKAGAPETA
Trigger: TGCGGTTTCTGGGGCCCCAGCTTTCTCTACTGCTTCTTCCAGCAAAGTACCCATGTTTGGCCTGGAGGCCATCTGGAGGAACGGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371868.5
ENST00000469828.1
CDS GCA 72 bp GTCCACATTCATCAGCGGGTACAGAGTCTTGGTCTCTaGCGGGCTCAGCACATGGGATTCCACACCATACGC +
Preference number: 6 (lower is better)
Translates to: VHIHQRVQSLGL*RAQHMGFHTIR
Trigger: GCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCTGATGAATGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp AGAGGTCGTCCACATTCATCAGCGGGTACAGAGTCTTaGTCTCTGCCGGGCTCAGCACATGGGATTCCACAC +
Preference number: 6 (lower is better)
Translates to: RGRPHSSAGTES*SLPGSAHGIPH
Trigger: GTGTGGAATCCCATGTGCTGAGCCCGGCAGAGACCAAGACTCTGTACCCGCTGATGAATGTGGACGACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CCA 72 bp CCCAAAATCATCCGTCCACACACGAATGCCGGTCACTaGGCAGTTCTCAATGACCTGTGCTCCTCGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PKIIRPHTNAGH*AVLNDLCSSGR
Trigger: TCTGCCCGAGGAGCACAGGTCATTGAGAACTGCCCAGTGACCGGCATTCGTGTGTGGACGGATGATTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298628.6
ENST00000371867.5
ENST00000371872.8
ENST00000427237.6
ENST00000439388.6
CDS CAA 72 bp GACTTGATTCCTGTCTTCTCCAGCACGGGGACCCTGTaGATGGCGCCTTCAATGTGCTGGGTGAACACCTCC +
Preference number: 6 (lower is better)
Translates to: DLIPVFSSTGTL*MAPSMCWVNTS
Trigger: GGAGGTGTTCACCCAGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCTGGAGAAGACAGGAATCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371872.8
ENST00000422262.6
ENST00000427237.6
ENST00000439388.6
CDS TCA 72 bp CACTCCACACTGCGCAGACCTTCTCTGTGGATGTTTTaGGGCAAAGCCCTCCAGCTGCCCTGGGTCTGTATT +
Preference number: 6 (lower is better)
Translates to: HSTLRRPSLWMF*GKALQLPWVCI
Trigger: AATACAGACCCAGGGCAGCTGGAGGGCTTTGCCTCAAAACATCCACAGAGAAGGTCTGCGCAGTGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS CCA 72 bp AAGGAAGGAGTGTGGCCCAAGTTCTCCCAGGAGTCCTaGACGTGCAAGTGCATGGGAGAAAAACGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: KEGVWPKFSQES*TCKCMGEKRSS
Trigger: ACTGCTGCGTTTTTCTCCCATGCACTTGCACGTCCAGGACTCCTGGGAGAACTTGGGCCACACTCCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298628.6
ENST00000371872.8
CDS GCA 72 bp GTGCTCTCATGCCCTTCTGAGGTCATCACTCCACACTaGGCAGACCTTCTCTGTGGATGTTTTGAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: VLSCPSEVITPH*ADLLCGCFEAK
Trigger: CTTTGCCTCAAAACATCCACAGAGAAGGTCTGCGCAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS GCA 72 bp TCATTTGCTGAAGGACGTAGGACTTGTGTGCTCTCATaGCCTTCTGAGGTCATCACTCCACACTGCGCAGAC +
Preference number: 6 (lower is better)
Translates to: SFAEGRRTCVLS*PSEVITPHCAD
Trigger: GTCTGCGCAGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5
CDS GCA 72 bp GGGCAGTGTCATTTGCTGAAGGACGTAGGACTTGTGTaGTCTCATGCCCTTCTGAGGTCATCACTCCACACT +
Preference number: 6 (lower is better)
Translates to: GQCHLLKDVGLV*SHALLRSSLHT
Trigger: AGTGTGGAGTGATGACCTCAGAAGGGCATGAGAGCACACAAGTCCTACGTCCTTCAGCAAATGACACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371867.5