RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000152700

Ensembl transcript IDs: ENST00000402673.7, ENST00000502286.1, ENST00000502539.5, ENST00000503318.5, ENST00000504242.1, ENST00000505758.5, ENST00000507419.5, ENST00000508363.5, ENST00000509730.5

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGGTTCTCAAAGCTGGACAGTAAGTCCTCTGGCTCAGGAACTCTaGCCCCTAAAGCTGGGAGGAAAGCTGGTTGCTCCTAAACATGGC +
Preference number: 1 (lower is better)
Translates to: RGSQSWTVSPLAQEL*PLKLGGKLVAPKHG
Trigger: GCCATGTTTAGGAGCAACCAGCTTTCCTCCCAGCTTTAGGGGGCAGAGTTCCTGAGCCAGAGGACTTACTGTCCAGCTTTGAGAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CCA 90 bp AAAGAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTaGACAGTAAGTCCTCTGGCTCAGGAACTCTGCCCCCTAAAGCTG +
Preference number: 1 (lower is better)
Translates to: KEQYPVHILWRGSQS*TVSPLAQELCPLKL
Trigger: CAGCTTTAGGGGGCAGAGTTCCTGAGCCAGAGGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CCA 90 bp TGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATaGAACTATAGAGCCTACCAAACTGAGAATCAACCTTGTGTACCA +
Preference number: 1 (lower is better)
Translates to: WAPIRLEHFRIRQLG*NYRAYQTENQPCVP
Trigger: TGGTACACAAGGTTGATTCTCAGTTTGGTAGGCTCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR TCA 90 bp TCTGTGCTTCTACTGTTTCTTGCCATCCTCTTAATTTGGTTCTCTTaGAAAAGAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: SVLLLFLAILLIWFS*KRAVPSAYTLERFS
Trigger: TGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAGAGGATGGCAAGAAACAGTAGAAGCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR TCA 90 bp CACAGAACAAGCTGTTTTATTCCTCAGATATACATGTCTCTACAATaGAACTGCACACAAGGTCCTACTTATTGCTTGCCCCAGAGAGTA +
Preference number: 1 (lower is better)
Translates to: HRTSCFIPQIYMSLQ*NCTQGPTYCLPQRV
Trigger: TACTCTCTGGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGAGGAATAAAACAGCTTGTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR TCA 90 bp AATAAAAATACACATGATTCAGGGATACATGGTATCAGGTGCAACTaGCCACAACCATCTCATGGTAAATACCTAAGCCTTGAGAGCCTT +
Preference number: 1 (lower is better)
Translates to: NKNTHDSGIHGIRCN*PQPSHGKYLSLESL
Trigger: AAGGCTCTCAAGGCTTAGGTATTTACCATGAGATGGTTGTGGTCAGTTGCACCTGATACCATGTATCCCTGAATCATGTGTATTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR GCA 90 bp CTTAAGGAGTACTTTAAACCTATCTGGAAGAAGAAATCAATAGGCTaGAATGTCATGTTCTACTTTTCCCATAGTGTTACTGAGGTTTCC +
Preference number: 1 (lower is better)
Translates to: LKEYFKPIWKKKSIG*NVMFYFSHSVTEVS
Trigger: GGAAACCTCAGTAACACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGATAGGTTTAAAGTACTCCTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCGGCGGGCAGATCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSGGQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCTGCCCGCC...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCAGCTGGGAGGAAAGCTaGTTGCTCCTAAACATGGCT +
Preference number: 2 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSSWEES*LLLNMA
Trigger: AGCCATGTTTAGGAGCAACCAGCTTTCCTCCCAGCT...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGGAGCAATCAAATCTCTaGGTAAGCCTGAACGTTGAG +
Preference number: 2 (lower is better)
Translates to: NYALASCSVGHTISLCPQEQSNL*VSLNVE
Trigger: CTCAACGTTCAGGCTTACTCAGAGATTTGATTGCTC...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR GCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCCAAGGTCCTACTTATTaGTTGCCCCAGAGAGTACTG +
Preference number: 2 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSQGPTY*LPQRVL
Trigger: CAGTACTCTCTGGGGCAAGCAATAAGTAGGACCTTG...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGGGTATCAGGTGCAACTaGCCACAACCATCTCATGGT +
Preference number: 2 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQGIRCN*PQPSHG
Trigger: ACCATGAGATGGTTGTGGTCAGTTGCACCTGATACC...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTGGCACGAGAATCGCTTaGACCTGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCGTRIA*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGCGATTCTCGTGCC...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR GCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCGTACTGCTGGAAAGTTaGTCTTTACAAATGGCGCTG +
Preference number: 2 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSVLLES*SLQMAL
Trigger: CAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTAC...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR GCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTCTGGGAAGCAGAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCLGSRG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTCTGCTTCCCAG...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR GCA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCAGTGCTTCAAATGTACTaGTGGAAAGTTGCTCTTTAC +
Preference number: 2 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSVLQMY*WKVALY
Trigger: GTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTGCCTGGACAACATGGTaGAACCCCGTCTCTAAAACA +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCAWTTW*NPVSKT
Trigger: TGTTTTAGAGACGGGGTTTCACCATGTTGTCCAGGC...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR GCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCATGTGGAGACACTGGTaGCTGTCATTGCTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: YTCLYNETAHKVLLIACPMWRHW*LSLLLG
Trigger: CCCCAAAAGCAATGACAGGCACCAGTGTCTCCACAT...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTGTTGCTCTTTACAAATaGCGCTGGGGTGATGTCAGA +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCVALYK*RWGDVR
Trigger: TCTGACATCACCCCAGCGCCATTTGTAAAGAGCAAC...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTCACAGATTACCCCATTaGGCACCAATAAGACTGGAG +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCHRLPH*APIRLE
Trigger: CTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 90 bp CTCTGTGCTTCTACTGTTTCTTGCCATCCTCTTAATTTGGTTCTCTaGAAAAAGAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: LCASTVSCHPLNLVL*KKSSTQCIYSGEVL
Trigger: GAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAGAGGATGGCAAGAAACAGTAGAAGCACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 90 bp TTTCATCTGTCATTAGTGACTGGACTTTTCCACACGTACAAGTATTaGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATCAACCTTCAA +
Preference number: 2 (lower is better)
Translates to: FHLSLVTGLFHTYKY*FACSGQSHGMINLQ
Trigger: TTGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGACAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
3UTR-3UTR TCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTTTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 2 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAA...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 90 bp GATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATaGCTTGCCCCAGAGAGTACTGTTAAATGTACAGAGACTGGGAAT +
Preference number: 2 (lower is better)
Translates to: DIHVSTMKLHTRSYL*LAPESTVKCTETGN
Trigger: ATTCCCAGTCTCTGTACATTTAACAGTACTCTCTGGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 90 bp TTGTCTTTCCTCTGTGCTTCTACTGTTTCTTGCCATCCTCTTAATTaGGTTCTCTTGAAAAAGAGCAGTACCCAGTGCATATACTCTGGA +
Preference number: 2 (lower is better)
Translates to: LSFLCASTVSCHPLN*VLLKKSSTQCIYSG
Trigger: TCCAGAGTATATGCACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAGAGGATGGCAAGAAACAGTAGAAGCACAGAGGAAAGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGAGCAATCAAATCTCTaGGTAAGCCTGAACGTTGAG +
Preference number: 2 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAEQSNL*VSLNVE
Trigger: CTCAACGTTCAGGCTTACTCAGAGATTTGATTGCTC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
3UTR-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTTCAAGTTATGCATGTTaGGCAATCAAATCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCSSYAC*AIKSLS
Trigger: ACTCAGAGATTTGATTGCTCAACATGCATAACTTGA...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTCAAATGGCGCTGGGGTaGTGTCAGATTATAAACTGT +
Preference number: 2 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSQMALG*CQIINC
Trigger: ACAGTTTATAATCTGACATCACCCCAGCGCCATTTG...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTTTAATTTGGTTCTCTTaGAAAAGAGCAGTACCCAGT +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCLIWFS*KRAVPS
Trigger: ACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAA...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTACTGAAATACCACATTaGGTCACATACCAAATACAG +
Preference number: 2 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCTEIPH*VTYQIQ
Trigger: CTGTATTTGGTATGTGACTCAATGTGGTATTTCAGT...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGACTTCAAATGTACTGCTaGAAAGTTGCTCTTTACAAA +
Preference number: 2 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRLQMYC*KVALYK
Trigger: TTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAG...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTATTAGACAGCTGGGATaGAACTATAGAGCCTACCAA +
Preference number: 2 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSIRQLG*NYRAYQ
Trigger: TTGGTAGGCTCTATAGTTCCATCCCAGCTGTCTAAT...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTTCAAGTTATGCATGTTaGGCAATCAAATCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGASSYAC*AIKSLS
Trigger: ACTCAGAGATTTGATTGCTCAACATGCATAACTTGA...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
3UTR GCA 72 bp CAAAGCTGGACAGTAAGTCCTCTGGCTCAGGAACTCTaGCCCCTAAAGCTGGGAGGAAAGCTGGTTGCTCCT +
Preference number: 3 (lower is better)
Translates to: QSWTVSPLAQEL*PLKLGGKLVAP
Trigger: AGGAGCAACCAGCTTTCCTCCCAGCTTTAGGGGGCAGAGTTCCTGAGCCAGAGGACTTACTGTCCAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CCA 72 bp TACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTaGACAGTAAGTCCTCTGGCTCAGGAACTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: YPVHILWRGSQS*TVSPLAQELCP
Trigger: GGGGCAGAGTTCCTGAGCCAGAGGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CCA 72 bp TCTAAATGTGGAGACACTGGTGCCTGTCATTGCTTTTaGGGAAGAGGCACAGATTACCCCATTGGGCACCAA +
Preference number: 3 (lower is better)
Translates to: SKCGDTGACHCF*GRGTDYPIGHQ
Trigger: TTGGTGCCCAATGGGGTAATCTGTGCCTCTTCCCCAAAAGCAATGACAGGCACCAGTGTCTCCACATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CAA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGCTTAATTTGGTTCTCTaGAAAAAGAGCAGTACCCAG +
Preference number: 3 (lower is better)
Translates to: NYALASCSVGHTISLCPQLNLVL*KKSSTQ
Trigger: CTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAG...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR GCA 72 bp TATGTATACCACAGTGTTAACTACGCCCTAGCATCTTaGAGTGTGGGACACACAATTAGCCTATGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: YVYHSVNYALAS*SVGHTISLCPQ
Trigger: CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTTAACACTGTGGTATACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR GCA 72 bp AGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTaGCTGCTCTGGGCAGAGCCATGGTATGATCAACCT +
Preference number: 3 (lower is better)
Translates to: SDWTFPHVQVFV*LLWAEPWYDQP
Trigger: AGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
3UTR CCA 72 bp TCTCTTGAAAAAGAGCAGTACCCAGTGCATATACTCTaGAGAGGTTCTCAAAGCTGGACAGTAAGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: SLEKEQYPVHIL*RGSQSWTVSPL
Trigger: CAGAGGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTCTTTTTCAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CAA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTTGCCTGTCATTGCTTTaGGGGAAGAGGCACAGATTA +
Preference number: 3 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCCLSLL*GKRHRL
Trigger: TAATCTGTGCCTCTTCCCCAAAAGCAATGACAGGCA...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR-3UTR CAA 90 bp AGAATCAGTATAGGCACATTAGCAATGGTTTCATCTGTCATTAGTGACTGGACTCGTACAAGTATTTGTTaGCCTGCTCTGGGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: RISIGTLAMVSSVISDWTRTSIC*PALGRA
Trigger: GGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACG...AGTCCAGTCACTAATGACAGATGAAACCATTGCTAATGTGCCTATACTGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
3UTR TCA 72 bp ACACATGATTCAGGGATACATGGTATCAGGTGCAACTaGCCACAACCATCTCATGGTAAATACCTAAGCCTT +
Preference number: 3 (lower is better)
Translates to: THDSGIHGIRCN*PQPSHGKYLSL
Trigger: AAGGCTTAGGTATTTACCATGAGATGGTTGTGGTCAGTTGCACCTGATACCATGTATCCCTGAATCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR TCA 72 bp CATATAAACCAAACATCTCTCGCAACCTCTCTTCACTaGTGGCTTCAGGTCTGTCGATCTTATTCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: HINQTSLATSLH*WLQVCRSYSQE
Trigger: TTCTTGGGAATAAGATCGACAGACCTGAAGCCATCAGTGAAGAGAGGTTGCGAGAGATGTTTGGTTTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
3UTR TCA 72 bp CTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTaGTGTCAGATTATAAACTGTAAAAACCAAGTACTT +
Preference number: 3 (lower is better)
Translates to: LLESCSLQMALG*CQIINCKNQVL
Trigger: AAGTACTTGGTTTTTACAGTTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
3UTR TCA 72 bp AGCTGTTTTATTCCTCAGATATACATGTCTCTACAATaGAACTGCACACAAGGTCCTACTTATTGCTTGCCC +
Preference number: 3 (lower is better)
Translates to: SCFIPQIYMSLQ*NCTQGPTYCLP
Trigger: GGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGAGGAATAAAACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR GCA 72 bp TACTTTAAACCTATCTGGAAGAAGAAATCAATAGGCTaGAATGTCATGTTCTACTTTTCCCATAGTGTTACT +
Preference number: 3 (lower is better)
Translates to: YFKPIWKKKSIG*NVMFYFSHSVT
Trigger: AGTAACACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGATAGGTTTAAAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTGGCCGCCGGTGGCCTaGGGAGAGTGCGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDWPPVA*GECGAM
Trigger: CATGGCGCCGCACTCTCCCCAGGCCACCGGCGGCCA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATGCGCGGCCGGCGGCTaGCAGGCACTTCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKCAAGG*QALPAR
Trigger: CCTGGCCGGAAGTGCCTGTCAGCCGCCGGCCGCGCA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCCAGGAGCTGTCAGGTaGCCTCGGGGCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDPGAVR*PRGSPA
Trigger: AGCCGGGCTGCCCCGAGGCCACCTGACAGCTCCTGG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCGCAAAGCGCGATGGCTaGCGTGGCCCCAGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSAKRDG*RGPSSH
Trigger: ATGCGAACTGGGGCCACGGCAGCCATCGCGCTTTGC...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGTCCCCTACTTGGCGTTaGCCGTACACCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQSPTWR*PYTRRP
Trigger: CGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGA...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCAGCCTGGCCAGGGCTaGCTGACCTTTGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDQPGQG*LTFACH
Trigger: GTGGCACGCAAAGGTCAGTCAGCCCTGGCCAGGCTG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGCCGTGAGAGTCGGTaGCGTGGCGGCGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAGRESR*RGGEAG
Trigger: CCCGGCCTCGCCGCCACGTCACCGACTCTCACGGCC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAACTTCCGGCCGGCCGTaGGAGTCGGTGACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKTSGRP*ESVTWR
Trigger: CCGCCACGTCACCGACTCTCACGGCCGGCCGGAAGT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATCCCAGGCTAGGCTGTaGCCGCCGGTGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKSQARL*PPVAWG
Trigger: TCCCCAGGCCACCGGCGGCCACAGCCTAGCCTGGGA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGGGCAGGAGAATCACTTaGAGCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQGRRIT*SWEVEV
Trigger: AACCTCCACCTCCCAGCTTCAAGTGATTCTCCTGCC...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCTGGCCAGGGCTGACTaGCCTTTGCGTGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDLARAD*PLRATA
Trigger: AGCAGTGGCACGCAAAGGTCAGTCAGCCCTGGCCAG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAAGTGCCACGTGTCCTaGTTGCGGCTGCGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKKCHVS*LRLRGR
Trigger: CCGGCCGCGCAGCCGCAATCAGGACACGTGGCACTT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGCCACGTGTCCTGATTaGGGCTGCGCGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAATCPD*GCAAGG
Trigger: GCCGCCGGCCGCGCAGCCGCAATCAGGACACGTGGC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGACCAGGAGACCGAACTaGAAAGCGCGATGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQTRRPN*KARWLP
Trigger: CGGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGT...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGAGAGTGCGGCGCCATaGCTCGGGCTTAATGCGCCC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKESAAP*LGLNAP
Trigger: GGGCGCATTAAGCCCGAGGCATGGCGCCGCACTCTC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGTGGCCTGGGGAGAGTaGGGCGCCATGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAVAWGE*GAMPRA
Trigger: AGCCCGAGGCATGGCGCCGCACTCTCCCCAGGCCAC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp TCATTAGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCCCCAGATCTGGTGCTaGCCTTGCCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLVTGLFHTYKYLFACSGPQIWC*PCLLLL
Trigger: CAACAGCAGCAGGCAAGGTCAGCACCAGATCTGGGG...CCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR GCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGCTCAGGAACTCTaGCCCCTAAAGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQLAQEL*PLKLGG
Trigger: TCCTCCCAGCTTTAGGGGGCAGAGTTCCTGAGCCAG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTAGCTGACCTTGCCTGCTaGTGTTGGGCCCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: DFSTRTSICLPALGRAMVADLAC*CWAPLQ
Trigger: TTGTAAAGGGGCCCAACAGCAGCAGGCAAGGTCAGC...TACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTTCGGGGCAGCCCGGCTaGCAGAGAAGAGTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGASGQPG*QRRVRR
Trigger: CCGGCGAACTCTTCTCTGCCAGCCGGGCTGCCCCGA...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCCCAGCTCCCAGTGGTaGTACGGTCTCAACAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDPSSQW*YGLNRG
Trigger: TCCTCTGTTGAGACCGTACCACCACTGGGAGCTGGG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGCTGAGGCAGGAGAATaGTGTGAACTTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDAEAGE*CELGRR
Trigger: CCGCCTCCCAAGTTCACACCATTCTCCTGCCTCAGC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCGCAACCTCTCTTCACTaGTGGCTTCAGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTATSLH*WLQVCR
Trigger: TCGACAGACCTGAAGCCATCAGTGAAGAGAGGTTGC...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCACGAAAGCGGCTACTaGATCTCAGATTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDHESGY*ISDCPT
Trigger: CGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp TCATTAGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGGGTGCTGACCTTGCCTaGTGCTGTTGGGCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLVTGLFHTYKYLFACSGGADLA*CCWAPL
Trigger: TAAAGGGGCCCAACAGCAGCAGGCAAGGTCAGCACC...CCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR GCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTCAGCTCTCTTCTTGTaGGCTGTTGTCGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDSALFL*AVVDPD
Trigger: GTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACTCTCTAGGTTTGGCTaGCGCCTTCTAGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKLSRFG*RLLAGR
Trigger: ACGCCCGGCTAGAAGGCGGCAGCCAAACCTAGAGAG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAACTGCAAAGCGCGATaGCTGCCGTGGCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKNCKAR*LPWPQF
Trigger: GAACTGGGGCCACGGCAGCCATCGCGCTTTGCAGTT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGGCCTGTCATTGCTTTTaGGGAAGAGGCACAGATTAC +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQACHCF*GRGTDY
Trigger: GTAATCTGTGCCTCTTCCCCAAAAGCAATGACAGGC...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGGGCCAGTTGAAAATTaGCCGGGCATGGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKGPVEN*PGMAAH
Trigger: GTGAGCCGCCATGCCCGGCCAATTTTCAACTGGCCC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACGCCCCAGCTCCCAGTaGTGGTACGGTCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKRPSSQ*WYGLNR
Trigger: TCTGTTGAGACCGTACCACCACTGGGAGCTGGGGCG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp GTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATCAACCTTCAGCAACCTCTCTTCACTaGTGGCTTCAGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: VQVFVCLLWAEPWYDQPSATSLH*WLQVCR
Trigger: TCGACAGACCTGAAGCCATCAGTGAAGAGAGGTTGC...TGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR TCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCGGTATCAGGTGCAACTaGCCACAACCATCTCATGGT +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTGIRCN*PQPSHG
Trigger: ACCATGAGATGGTTGTGGTCAGTTGCACCTGATACC...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCGCCTGGACAACATGGTaGAACCCCGTCTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTAWTTW*NPVSKT
Trigger: TGTTTTAGAGACGGGGTTTCACCATGTTGTCCAGGC...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGGGCAGGGGACACACCTaGAACAAAGTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQGRGHT*NKVGFG
Trigger: TCCAAAGCCAACTTTGTTTCAGGTGTGTCCCCTGCC...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCAAAGAGCAGTACCCAGTaGATATACTCTGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSKSSTQ*IYSGEV
Trigger: AACCTCTCCAGAGTATATGCACTGGGTACTGCTCTT...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGACTGGGAAGCAGAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRLGSRG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTCTGCTTCCCAG...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCAAGTATTTGTTTGCCTaGTCTGGGCAGAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: VTGLFHTYKYLFACSGQSKYLFA*SGQSHG
Trigger: ACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTT...GCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTACGCAATCCCCTACTTaGCGTTGGCCGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCTQSPT*RWPYTR
Trigger: CCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGT...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCTTGCCTGCTGCTGTTaGGCCCCTTTACAAAATATC +
Preference number: 4 (lower is better)
Translates to: VTGLFHTYKYLFACSGQSLACCC*APLQNI
Trigger: GATATTTTGTAAAGGGGCCCAACAGCAGCAGGCAAG...GCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTAGAACGGAGCCGCCTTaGCCTCGGGGTCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGARTEPP*PRGLPT
Trigger: TGTAGGGAGACCCCGAGGCCAAGGCGGCTCCGTTCT...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGGCACGAGAATCGCTTaGACCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKGTRIA*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGCGATTCTCGTGCC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTACAGCCTTTCGTGGTCTaGACAATCCACCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: DFSTRTSICLPALGRAMVQPFVV*TIHQKY
Trigger: GTATTTCTGGTGGATTGTGCAGACCACGAAAGGCTG...TACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR GCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCAAGGTCCTACTTATTaGTTGCCCCAGAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTQGPTY*LPQRVL
Trigger: CAGTACTCTCTGGGGCAAGCAATAAGTAGGACCTTG...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGAAGCCACTTTTAAAATaGATGCTGGCCGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQKPLLK*MLAGRS
Trigger: ACTGCGCCCGGCCAGCATGCATTTTAAAAGTGGCTT...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCACCCTGAGTGCTCTTaGCTCAGTATGGCAACTGAT +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQHPECS*LSMATD
Trigger: ATCAGTTGCCATACTGAGGCAAGAGCACTCAGGGTG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCCACGATCCTGGCTCTaGGAGCGAGGTCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAPRSWL*ERGHVH
Trigger: GTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCGTTGCTCTTTACAAATaGCGCTGGGGTGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTVALYK*RWGDVR
Trigger: TCTGACATCACCCCAGCGCCATTTGTAAAGAGCAAC...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGATTAGACAGCTGGGATaGAACTATAGAGCCTACCAA +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQIRQLG*NYRAYQ
Trigger: TTGGTAGGCTCTATAGTTCCATCCCAGCTGTCTAAT...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCCTTCAATCAAATCATaGACCTGCTTACTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VTGLFHTYKYLFACSGQSPSIKS*TCLLCG
Trigger: GCCACAGAGTAAGCAGGTCCATGATTTGATTGAAGG...GCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp CACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATCAACCTCTCTGGGCAGAGCCATaGTATGATCAACCTTCAATC +
Preference number: 4 (lower is better)
Translates to: HVQVFVCLLWAEPWYDQPLWAEP*YDQPSI
Trigger: GATTGAAGGTTGATCATACCATGGCTCTGCCCAGAG...AGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTATTGCCCCACGATCCTaGCTCTGCGAGCGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAIAPRS*LCERGH
Trigger: GTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAAT...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATACGTCATGCCAGCAATaGTCAGTTCTTCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDTSCQQ*SVLRKL
Trigger: CAGCTTCCGAAGAACTGACCATTGCTGGCATGACGT...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGGTGTTACAATTAGAATaGGGGTTCTGGAGCAAGATA +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQVLQLE*GFWSKI
Trigger: TATCTTGCTCCAGAACCCTCATTCTAATTGTAACAC...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTCTGTGGCTTCCCTTaGCACTGGAGGATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQLCGFP*HWRIFK
Trigger: TTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGCATTCAGCCAAATACTaGAGGTTTCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQHSAKY*RFHHGK
Trigger: TTTTCCATGGTGAAACCTTCAGTATTTGGCTGAATG...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp AACTACGCCCTAGCATCTTGCAGTGTGGGACACACAATTAGCCTATGTCCCCAGGTGCTTCAAATGTACTaGTGGAAAGTTGCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: NYALASCSVGHTISLCPQVLQMY*WKVALY
Trigger: GTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC...CTGGGGACATAGGCTAATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAATGTGGAGACACTGGTaGCTGTCATTGCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRMWRHW*LSLLLG
Trigger: CCCCAAAAGCAATGACAGGCACCAGTGTCTCCACAT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTACGCCCTAGCATCTTaGAGTGTGGGACACACAATT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDYALAS*SVGHTI
Trigger: AATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAACCTTTGCGTGCCACTaGTGCTTGAGGCGACATAGA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKTFACH*CLRRHR
Trigger: TCTATGTCGCCTCAAGCAGCAGTGGCACGCAAAGGT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGCTGACTGACCTTTaGGTGCCACTGCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAGLTDL*VPLLLE
Trigger: CTCAAGCAGCAGTGGCACGCAAAGGTCAGTCAGCCC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp TCACTGATGGCTTCAGGTCTGTCGATCTTATTCCCAAGAATCAGTATAGGCACAACGTCATGCCAGCAATaGTCAGTTCTTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLMASGLSILFPRISIGTTSCQQ*SVLRKW
Trigger: CCACTTCCGAAGAACTGACCATTGCTGGCATGACGT...TGTGCCTATACTGATTCTTGGGAATAAGATCGACAGACCTGAAGCCATCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATCAACCTTCATCTAACAGCCTTTCGTaGTCTGCACAATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VQVFVCLLWAEPWYDQPSSNSLS*SAQSTR
Trigger: TCTGGTGGATTGTGCAGACCACGAAAGGCTGTTAGA...TGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTTGCTCTTTACAAATaGCGCTGGGGTGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDVALYK*RWGDVR
Trigger: TCTGACATCACCCCAGCGCCATTTGTAAAGAGCAAC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCACAGATTACCCCATTaGGCACCAATAAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDHRLPH*APIRLE
Trigger: CTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCCAGTGCATATACTCTaGAGAGGTTCTCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQPVHIL*RGSQSW
Trigger: CCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTTAAAATCCAGGTGTTaGGTGGGGATTTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDLKSRC*VGICEG
Trigger: CCCCTCACAAATCCCCACCCAACACCTGGATTTTAA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATTTTGTTTGCCTGCTCTaGGCAGAGCCATGGTATGAT +
Preference number: 4 (lower is better)
Translates to: TFPHVQVFVCLLWAEPWYFVCLL*AEPWYD
Trigger: ATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAA...ATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCGTGCCACTGCTGCTTaGGGCGACATAGATAGAGAG +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGARATAA*GDIDRE
Trigger: CTCTCTATCTATGTCGCCTCAAGCAGCAGTGGCACG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTACTGCTGGAAAGTTaGTCTTTACAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDVLLES*SLQMAL
Trigger: CAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTAC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR GCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGAAATACTCCATGGATaGACACATTCACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDEILHG*THSHRH
Trigger: GTGCCTGTGTGAATGTGTGCATCCATGGAGTATTTC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCTCAGTTCTTCGGAAGTaGGATGTAATGTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTSVLRK*DVMLGH
Trigger: ATGTCCCAACATTACATCCCACTTCCGAAGAACTGA...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGATCTAACAGCCTTTCGTaGTCTGCACAATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRSNSLS*SAQSTR
Trigger: TCTGGTGGATTGTGCAGACCACGAAAGGCTGTTAGA...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCAGCTGGGAGGAAAGCTaGTTGCTCCTAAACATGGCT +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPSWEES*LLLNMA
Trigger: AGCCATGTTTAGGAGCAACCAGCTTTCCTCCCAGCT...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCGCTCTTGCCTCAGTATaGCAACTGATTATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTALASV*QLIMSS
Trigger: TGAACTCATAATCAGTTGCCATACTGAGGCAAGAGC...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 72 bp TCATTAGTGACTGGACTTTTCCACACGTACAAGTATTaGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATC +
Preference number: 4 (lower is better)
Translates to: SLVTGLFHTYKY*FACSGQSHGMI
Trigger: GATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGCAACCTCTCTTCACTaGTGGCTTCAGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAATSLH*WLQVCR
Trigger: TCGACAGACCTGAAGCCATCAGTGAAGAGAGGTTGC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATTACATGTCTCTACAATaGAACTGCACACAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDYMSLQ*NCTQGP
Trigger: AGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTA...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTTTTGGACAGTGCCTaGTTTGTATGTATACCACAG +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQLLDSA*FVCIPQ
Trigger: CTGTGGTATACATACAAATCAGGCACTGTCCAAAAG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp CATAAATGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCTGTAAACCTTTCCCCTaGAACTCTCCAATCATGTTA +
Preference number: 4 (lower is better)
Translates to: HKCAFLQKANPTGTRTQTCKPFP*NSPIML
Trigger: TAACATGATTGGAGAGTTTCAGGGGAAAGGTTTACA...GGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACATTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTAAGCAGAGGTTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSKQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCTT...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTAGGTGGAGGTTGCAGTaGGTGGAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLRWRLQ*VEITPL
Trigger: CAGTGGTGTGATCTCCACTCACTGCAACCTCCACCT...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACAGCCTTTCGTGGTCTaGACAATCCACCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKQPFVV*TIHQKY
Trigger: GTATTTCTGGTGGATTGTGCAGACCACGAAAGGCTG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR CCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGATAGGGTCTGCGACTaGAGGGAACGCAATCCCCTA +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLDRVCD*RERNPL
Trigger: TAGGGGATTGCGTTCCCTCCAGTCGCAGACCCTATC...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATCTAACAGCCTTTCGTaGTCTGCACAATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKSNSLS*SAQSTR
Trigger: TCTGGTGGATTGTGCAGACCACGAAAGGCTGTTAGA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR CCA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCACTTCAAATGTACTGCTaGAAAGTTGCTCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSLQMYC*KVALYK
Trigger: TTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAG...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCAGAGGTTCTCAAAGCTaGACAGTAAGTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPRGSQS*TVSPLA
Trigger: AGCCAGAGGACTTACTGTCCAGCTTTGAGAACCTCT...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCAGAACCTGTGAAATGCTaGGTTTTGAATGTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSEPVKC*VLNVVN
Trigger: ATTAACTACATTCAAAACCCAGCATTTCACAGGTTC...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGACCTGGAACCAATGTaGGTTTGTGTTAATCAATGT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDDLEPM*VCVNQC
Trigger: ACATTGATTAACACAAACTCACATTGGTTCCAGGTC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR TCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTGAGCAATCAAATCTCTaGGTAAGCCTGAACGTTGAG +
Preference number: 4 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCEQSNL*VSLNVE
Trigger: CTCAACGTTCAGGCTTACTCAGAGATTTGATTGCTC...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGAGCAATCAAATCTCTaGGTAAGCCTGAACGTTGAG +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKEQSNL*VSLNVE
Trigger: CTCAACGTTCAGGCTTACTCAGAGATTTGATTGCTC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR TCA 90 bp GAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTTTAATTTGGTTCTCTTaGAAAAGAGCAGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: EQYPVHILWRGSQSWTVSLIWFS*KRAVPS
Trigger: ACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAA...ACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ACTGATGGCTTCAGGTCTGTCGATCTTATTCCCAAGAATCAGTATAGGCACATTGGCAGAGCCATGGTATaGTCAACCTTCAATCAAATC +
Preference number: 4 (lower is better)
Translates to: TDGFRSVDLIPKNQYRHIGRAMV*STFNQI
Trigger: GATTTGATTGAAGGTTGATCATACCATGGCTCTGCC...AATGTGCCTATACTGATTCTTGGGAATAAGATCGACAGACCTGAAGCCATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAATGAAATACTGCGATaGACATTAACCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKNEILR*TLTAPA
Trigger: AGCTGGGGCGGTTAATGTTCATCGCAGTATTTCATT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATTAATCAATGTACTGTaGCATCCAGCGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKLINVL*HPAEAF
Trigger: GAAGGCTTCCGCTGGATGGCACAGTACATTGATTAA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR GCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTGCTTCAAATGTACTaGTGGAAAGTTGCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDVLQMY*WKVALY
Trigger: GTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR GCA 90 bp TCATCTGTCATTAGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGATCAAATCATGGACCTaGTTACTCTGTGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSVISDWTFPHVQVFVCLIKSWT*LLCGPR
Trigger: TCTGGGGCCACAGAGTAAGCAGGTCCATGATTTGAT...CAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGACAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp GAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTATTCTCAGTGCACTCTaGTCAAATTTTACTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EQYPVHILWRGSQSWTVSILSAL*SNFTWQ
Trigger: TTGCCAAGTAAAATTTGACCAGAGTGCACTGAGAAT...ACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGTAATCCAAGCTACTTaGAAGGTTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKVIQAT*KVEAGE
Trigger: TTCTCCTGCCTCAACCTTCCAAGTAGCTTGGATTAC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCCTGAAGGTTTCACCATaGAAAAACACTTTTATCACT +
Preference number: 4 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSLKVSP*KNTFIT
Trigger: AGTGATAAAAGTGTTTTTCCATGGTGAAACCTTCAG...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAGAGCGAGACTCCATTaGGATGTAATGTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKRARLH*DVMLGH
Trigger: ATGTCCCAACATTACATCCCAATGGAGTCTCGCTCT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
3UTR CAA 72 bp GTCTCTACAATGAAACTGCACACAAGGTCCTACTTATaGCTTGCCCCAGAGAGTACTGTTAAATGTACAGAG +
Preference number: 4 (lower is better)
Translates to: VSTMKLHTRSYL*LAPESTVKCTE
Trigger: CTCTGTACATTTAACAGTACTCTCTGGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 72 bp TTTGGGGCAGGGGACACACCTGAAACAAAGTTGGCTTaGGATAACTTCGCTTACTTTCCTTTGAATACTTTG +
Preference number: 4 (lower is better)
Translates to: FGAGDTPETKLA*DNFAYFPLNTL
Trigger: CAAAGTATTCAAAGGAAAGTAAGCGAAGTTATCCAAAGCCAACTTTGTTTCAGGTGTGTCCCCTGCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCCTGTGGTCCACAAAGTaGCTTTGTTTCTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPLWSTK*LCFFDP
Trigger: AGGATCAAAGAAACAAAGTCACTTTGTGGACCACAG...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCTCAACAGAGGACGATaGCTTCTATGGTCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGALNRGR*LLWSQV
Trigger: TACCTGAGACCATAGAAGTCATCGTCCTCTGTTGAG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATAAATTAAAATTCCTCTaGGTCCTCCAGTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDKLKFL*VLQSKT
Trigger: TGTCTTTGACTGGAGGACTCAGAGGAATTTTAATTT...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAGCGTGACTATGCTGTaGATCAGCGAGTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKSVTML*ISEFQN
Trigger: ATTTTGAAACTCGCTGATTCACAGCATAGTCACGCT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGTTGGCAATAAATCCTTaGAAACGTCAGTCATGTAAG +
Preference number: 4 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQLAINP*KRQSCK
Trigger: CTTACATGACTGACGTTTGCAAGGATTTATTGCCAA...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTACGTCATGCCAGCAATaGTCAGTTCTTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLTSCQQ*SVLRKW
Trigger: CCACTTCCGAAGAACTGACCATTGCTGGCATGACGT...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAAAAATTAACTGGGCATaGTGTGGTGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKKINWA*CGAPVI
Trigger: GATTACAGGTGCACCACACCATGCCCAGTTAATTTT...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCTCCGCTTTCAGCAGTaGTCTTTCAGCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGALRFQQ*SFSSLL
Trigger: AAGAAGAGAGCTGAAAGACCACTGCTGAAAGCGGAG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACAAAGGCCTCCTTCTTaGCTTGATCACACTATTAAC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKQRPPS*LDHTIN
Trigger: GTTAATAGTGTGATCAAGCCAAGAAGGAGGCCTTTG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
3UTR CAA 72 bp AATCTATTTGGGGCAGGGGACACACCTGAAACAAAGTaGGCTTTGGATAACTTCGCTTACTTTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: NLFGAGDTPETK*ALDNFAYFPLN
Trigger: ATTCAAAGGAAAGTAAGCGAAGTTATCCAAAGCCAACTTTGTTTCAGGTGTGTCCCCTGCCCCAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCAAATGGCGCTGGGGTaGTGTCAGATTATAAACTGT +
Preference number: 4 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAQMALG*CQIINC
Trigger: ACAGTTTATAATCTGACATCACCCCAGCGCCATTTG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
CDS-3UTR TCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACACGAAGACGAAATGTaGATGAAATACTGCGATGAA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKHEDEM*MKYCDE
Trigger: TTCATCGCAGTATTTCATTCACATTTCGTCTTCGTG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR GCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTCAGCCTTTCGTGGTCTaGACAATCCACCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLQPFVV*TIHQKY
Trigger: GTATTTCTGGTGGATTGTGCAGACCACGAAAGGCTG...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAAAACAGAACTGTTCCTaGCTTTCACCCCAAAATATT +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRKQNCS*LSPQNI
Trigger: AATATTTTGGGGTGAAAGGCAGGAACAGTTCTGTTT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ATCAGTATAGGCACATTAGCAATGGTTTCATCTGTCATTAGTGACTGGACTTTTGTACAAGTATTTGTTTaGCTGCTCTGGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ISIGTLAMVSSVISDWTFVQVFV*LLWAEP
Trigger: TGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTAC...AAAAGTCCAGTCACTAATGACAGATGAAACCATTGCTAATGTGCCTATACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGTACTAGTATTTACCTaGGAAATACTCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKVLVFT*EILHGC
Trigger: GCATCCATGGAGTATTTCCCAGGTAAATACTAGTAC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCAATACAAAAATTAACTaGGCATGGTGTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPNTKIN*AWCGAP
Trigger: AGGTGCACCACACCATGCCCAGTTAATTTTTGTATT...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATACATATCCCAAGAGCTaGTTCTTCTTTTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDTYPKS*FFFYLV
Trigger: AACCAAATAAAAGAAGAACCAGCTCTTGGGATATGT...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCTCAAGTTATGCATGTTaGGCAATCAAATCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPSSYAC*AIKSLS
Trigger: ACTCAGAGATTTGATTGCTCAACATGCATAACTTGA...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTATTAACGGCAGTCAGTaGAACAGGTATGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLINGSQ*NRYGIS
Trigger: AGAGATCCCATACCTGTTTCACTGACTGCCGTTAAT...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTTTAATCAATGTACTGTaGCATCCAGCGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSLINVL*HPAEAF
Trigger: GAAGGCTTCCGCTGGATGGCACAGTACATTGATTAA...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTTTTGCCCAACAAGGATaGCAAACATTAGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCFAQQG*QTLEFV
Trigger: AACAAACTCTAATGTTTGGCATCCTTGTTGGGCAAA...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATGTAGCTATTCTCAGTaGACTCTGGTCAAATTTTAC +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKCSYSQ*TLVKFY
Trigger: GTAAAATTTGACCAGAGTGCACTGAGAATAGCTACA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAAAAGTCTTTGTTGTATaGAGTAAGAACTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRKVFVV*SKNYLR
Trigger: TCTCAGGTAGTTCTTACTCCATACAACAAAGACTTT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAAAACAAAGTTGGCTTTaGATAACTTCGCTTACTTTC +
Preference number: 4 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRKQSWL*ITSLTF
Trigger: GAAAGTAAGCGAAGTTATCCAAAGCCAACTTTGTTT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
3UTR CAA 72 bp TCTACTGTTTCTTGCCATCCTCTTAATTTGGTTCTCTaGAAAAAGAGCAGTACCCAGTGCATATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: STVSCHPLNLVL*KKSSTQCIYSG
Trigger: TCCAGAGTATATGCACTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAGAGGATGGCAAGAAACAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTCCACATATCTCAGACTaGCACAGAACAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSPHISD*HRTSCF
Trigger: AAAACAGCTTGTTCTGTGTCAGTCTGAGATATGTGG...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp TATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCCCCAAATCTTTTGGACAGTaGCTGATTTGTATGTATACC +
Preference number: 4 (lower is better)
Translates to: YTCLYNETAHKVLLIACPKSFGQ*LICMYT
Trigger: GGTATACATACAAATCAGGCACTGTCCAAAAGATTT...GGGGCAAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACTTCAAATGTACTGCTaGAAAGTTGCTCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKLQMYC*KVALYK
Trigger: TTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000507419.5
3UTR CAA 72 bp TGTAGCTATTCTCAGTGCACTCTGGTCAAATTTTACTaGGCAATAAATCCTTGCAAACGTCAGTCATGTAAG +
Preference number: 4 (lower is better)
Translates to: CSYSQCTLVKFY*AINPCKRQSCK
Trigger: CTTACATGACTGACGTTTGCAAGGATTTATTGCCAAGTAAAATTTGACCAGAGTGCACTGAGAATAGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGACCTGGAACCAATGTaGGTTTGTGTTAATCAATGT +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLDLEPM*VCVNQC
Trigger: ACATTGATTAACACAAACTCACATTGGTTCCAGGTC...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR TCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTCGTCAGTCATGTAAGTaGCTAACAAGACTGAAATAC +
Preference number: 4 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSRQSCK*LTRLKY
Trigger: GTATTTCAGTCTTGTTAGTCACTTACATGACTGACG...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTCACCTGAAACAAAGTTaGCTTTGGATAACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSHLKQS*LWITSL
Trigger: AAGCGAAGTTATCCAAAGCCAACTTTGTTTCAGGTG...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CCA 90 bp ATCAGTATAGGCACATTAGCAATGGTTTCATCTGTCATTAGTGACTGGACTTTTTCTGTCATTAGTGACTaGACTTTTCCACACGTACAA +
Preference number: 4 (lower is better)
Translates to: ISIGTLAMVSSVISDWTFSVISD*TFPHVQ
Trigger: TTGTACGTGTGGAAAAGTCCAGTCACTAATGACAGA...AAAAGTCCAGTCACTAATGACAGATGAAACCATTGCTAATGTGCCTATACTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR TCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGAACAGAAGGAATTTTaGGAGATTTCCCCTTATGTA +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLEQKEF*EISPYV
Trigger: TACATAAGGGGAAATCTCTCAAAATTCCTTCTGTTC...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR GCA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTGCTTCTACTGTTTCTTaGCATCCTCTTAATTTGGTT +
Preference number: 4 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLASTVS*HPLNLV
Trigger: AACCAAATTAAGAGGATGGCAAGAAACAGTAGAAGC...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS CCA 90 bp GGTCGGGGCACCAGGAGCTGTCAGGTGGCCTCGGGGCAGCCCGGCTaGCAGAGAAGAGTTCGCCGGCGCGGCGGCGGCTGCTGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: GRGTRSCQVASGQPG*QRRVRRRGGGCCEP
Trigger: GGGCTCGCAGCAGCCGCCGCCGCGCCGGCGAACTCTTCTCTGCCAGCCGGGCTGCCCCGAGGCCACCTGACAGCTCCTGGTGCCCCGACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp GCCCCGCCGGCCCGACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTaGCCGCCGGTGGCCTGGGGAGAGTGCGGCGCCATGCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: APPARLSSLSSQARL*PPVAWGECGAMPRA
Trigger: AGCCCGAGGCATGGCGCCGCACTCTCCCCAGGCCACCGGCGGCCACAGCCTAGCCTGGGAGCTGAGGCTTGAGAGTCGGGCCGGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 90 bp GCGGGAATTTCCGTAGCGGTGACACACGGCACTTCCGGCCGGCCGTaGGAGTCGGTGACGTGGCGGCGAGGCCGGGCACGGTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: AGISVAVTHGTSGRP*ESVTWRRGRARSSG
Trigger: CCCCGACGACCGTGCCCGGCCTCGCCGCCACGTCACCGACTCTCACGGCCGGCCGGAAGTGCCGTGTGTCACCGCTACGGAAATTCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp CCCGACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTGGCCGCCGGTaGCCTGGGGAGAGTGCGGCGCCATGCCTCGGGCTTAATGCGCCC +
Preference number: 5 (lower is better)
Translates to: PDSQASAPRLGCGRR*PGESAAPCLGLNAP
Trigger: GGGCGCATTAAGCCCGAGGCATGGCGCCGCACTCTCCCCAGGCCACCGGCGGCCACAGCCTAGCCTGGGAGCTGAGGCTTGAGAGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp AGGGAAACTCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTTaGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: RETLRLEGTQSPTWR*PYTRRPNCKARWLP
Trigger: CGGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGAGTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504242.1
CDS TCA 90 bp ACCCGAGGAGAGGAACTGTCAGTCCCACCCCACGAAAGCGGCTACTaGATCTCAGATTGCCCCACGATCCTGGCTCTGCGAGCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TRGEELSVPPHESGY*ISDCPTILALRARS
Trigger: TGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTGGGGTGGGACTGACAGTTCCTCTCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp AAACTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTTaGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: KLCLRLEGTQSPTWR*PYTRRPNCKARWLP
Trigger: CGGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS GCA 90 bp CCTCCTCCCTCCGCTTTCAGCAGTGGTCTTTCAGCTCTCTTCTTGTaGGCTGTTGTCGACCCCGACCAGCCCCTTCCAACCCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: PPPSAFSSGLSALFL*AVVDPDQPLPTQSS
Trigger: TGATGACTGGGTTGGAAGGGGCTGGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCACTGCTGAAAGCGGAGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp AGAGGGAAACTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTTaGCGTTGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGG +
Preference number: 5 (lower is better)
Translates to: RGKLCLRLEGTQSPT*RWPYTRRPNCKARW
Trigger: CCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAGTTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS CCA 90 bp CACCCCACGAAAGCGGCTACTGAATCTCAGATTGCCCCACGATCCTaGCTCTGCGAGCGAGGTCACGTTCACAACGGCGGGAATTTCCGT +
Preference number: 5 (lower is better)
Translates to: HPTKAATESQIAPRS*LCERGHVHNGGNFR
Trigger: ACGGAAATTCCCGCCGTTGTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS GCA 90 bp ACGAAAGCGGCTACTGAATCTCAGATTGCCCCACGATCCTGGCTCTaGGAGCGAGGTCACGTTCACAACGGCGGGAATTTCCGTAGCGGT +
Preference number: 5 (lower is better)
Translates to: TKAATESQIAPRSWL*ERGHVHNGGNFRSG
Trigger: ACCGCTACGGAAATTCCCGCCGTTGTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 90 bp AACCGCCCCAGCTCCCAGTGGTGGTACGGTCTCAACAGAGGACGATaGCTTCTATGGTCTCAGGTAATCTTCACAAAACCCGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: NRPSSQWWYGLNRGR*LLWSQVIFTKPEER
Trigger: CCTCTCCTCGGGTTTTGTGAAGATTACCTGAGACCATAGAAGTCATCGTCCTCTGTTGAGACCGTACCACCACTGGGAGCTGGGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 90 bp GTCTTCAGTCTTAAGTCGTTAGCCTCCTCCCTCCGCTTTCAGCAGTaGTCTTTCAGCTCTCTTCTTGTGCGCTGTTGTCGACCCCGACCA +
Preference number: 5 (lower is better)
Translates to: VFSLKSLASSLRFQQ*SFSSLLVRCCRPRP
Trigger: TGGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCACTGCTGAAAGCGGAGGGAGGAGGCTAACGACTTAAGACTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCACACTGGTGCCTGTCATaGCTTTTGGGGAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSHWCLS*LLGKRH
Trigger: GTGCCTCTTCCCCAAAAGCAATGACAGGCACCAGTG...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATGATCAACCTTCAGATCTGGTGCTGACCTaGCCTGCTGCTGTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: VQVFVCLLWAEPWYDQPSDLVLT*PAAVGP
Trigger: GGGCCCAACAGCAGCAGGCAAGGTCAGCACCAGATC...TGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CAA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAG +
Preference number: 5 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQNAIPY*ALAVHQ
Trigger: CTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTT...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCAGAACGGAGCCGCCTaGGCCTCGGGGTCTCCCTAC +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAQNGAA*ASGSPY
Trigger: GTAGGGAGACCCCGAGGCCAAGGCGGCTCCGTTCTG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAAGGCAGGAGAATCACTaGAAGCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRRQENH*KLGGGG
Trigger: ACCTCCACCTCCCAGCTTCAAGTGATTCTCCTGCCT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTACACACGTACAAGTATTaGTTTGCCTGCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: DFSTRTSICLPALGRAMVHTYKY*FACSGQ
Trigger: CTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTG...TACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTTCTTCTTGTGCGCTGTaGTCGACCCCGACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGASSCAL*STPTSP
Trigger: GGGGCTGGTCGGGGTCGACAACAGCGCACAAGAAGA...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCTACTGAATCTCAGATaGCCCCACGATCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDLLNLR*PHDPGS
Trigger: AGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 90 bp ACACGTACAAGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATaGTCAACCTTCAATCAAATCATGGACCTGCTTACTCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: TRTSICLPALGRAMV*STFNQIMDLLTLWP
Trigger: GGGCCACAGAGTAAGCAGGTCCATGATTTGATTGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS TCA 90 bp GTGAATCAAGTGGCAAAGTCCTCACTGAAGATGATTGTTGGTAGGTaGGAGCTAAAGAATGGTGAAAAGCCTGCGACTGGAGGGAACGCA +
Preference number: 5 (lower is better)
Translates to: VNQVAKSSLKMIVGR*ELKNGEKPATGGNA
Trigger: TGCGTTCCCTCCAGTCGCAGGCTTTTCACCATTCTTTAGCTCTCACCTACCAACAATCATCTTCAGTGAGGACTTTGCCACTTGATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505758.5
CDS TCA 90 bp ATGGAAACCGGACACAGCAGTAGGGTGGACGCATCAGATTATAAATaGCCCTGTCTCCTTTGTTCGGTGTACTCTTGTGGCAAAACTGCT +
Preference number: 5 (lower is better)
Translates to: METGHSSRVDASDYK*PCLLCSVYSCGKTA
Trigger: AGCAGTTTTGCCACAAGAGTACACCGAACAAAGGAGACAGGGTCATTTATAATCTGATGCGTCCACCCTACTGCTGTGTCCGGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS GCA 90 bp CTCCTCCCTTCCACTTCTGGGACTTCAGTTGCAGGTTTGTTAGACTaGCTGATGTTGTCTCACCAGTCATTGAGGCTCTGTTTATTTTGC +
Preference number: 5 (lower is better)
Translates to: LLPSTSGTSVAGLLD*LMLSHQSLRLCLFC
Trigger: GCAAAATAAACAGAGCCTCAATGACTGGTGAGACAACATCAGGCAGTCTAACAAACCTGCAACTGAAGTCCCAGAAGTGGAAGGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS-3UTR CAA 90 bp CACAGATTACCCCATTGGGCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCAGGCACATGCAGAGTaGTCTTTCCTCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HRLPHWAPIRLEHFRIRQQAHAE*SFLCAS
Trigger: AGAAGCACAGAGGAAAGACAACTCTGCATGTGCCTG...CTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp TCATTAGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTGCCTGCTCTGGGCGTACAAGTATTTGTTaGCCTGCTCTGGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SLVTGLFHTYKYLFACSGRTSIC*PALGRA
Trigger: GGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACG...CCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS CCA 90 bp AGCCAATCAGGACAAATACAGAATGTGAGGTCCCATTCCAGCCAATaGAAACCGGACACAGCAGTAGGGTGGACGCATCAGATTATAAAT +
Preference number: 5 (lower is better)
Translates to: SQSGQIQNVRSHSSQ*KPDTAVGWTHQIIN
Trigger: ATTTATAATCTGATGCGTCCACCCTACTGCTGTGTCCGGTTTCCATTGGCTGGAATGGGACCTCACATTCTGTATTTGTCCTGATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS-3UTR CAA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTATCCCCTACTTGGCGTaGGCCGTACACCAGGAGACC +
Preference number: 5 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSIPYLA*AVHQET
Trigger: GGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGAT...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp TGTGCTTTTCTTCAGAAGGCCAATCCCACAGGGACTAGGACACAGACCCCATCATGCCATCCTCTTAATTaGGTTCTCTTGAAAAAGAGC +
Preference number: 5 (lower is better)
Translates to: CAFLQKANPTGTRTQTPSCHPLN*VLLKKS
Trigger: GCTCTTTTTCAAGAGAACCAAATTAAGAGGATGGCA...TGATGGGGTCTGTGTCCTAGTCCCTGTGGGATTGGCCTTCTGAAGAAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTCTACGCCCTAGCATCTaGCAGTGTGGGACACACAAT +
Preference number: 5 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCLRPSI*QCGTHN
Trigger: ATTGTGTGTCCCACACTGCAAGATGCTAGGGCGTAG...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCACACCTGAAACAAAGTaGGCTTTGGATAACTTCGCT +
Preference number: 5 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSTPETK*ALDNFA
Trigger: AGCGAAGTTATCCAAAGCCAACTTTGTTTCAGGTGT...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATAAGCTACTTGGAAGGTaGAGGCAGGAGAATCACTTG +
Preference number: 5 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDKLLGR*RQENHL
Trigger: CAAGTGATTCTCCTGCCTCAACCTTCCAAGTAGCTT...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS TCA 90 bp TTTACATCTGAAACACGAAGACGAAATGTGAATGAAATACTGCGATaGACATTAACCGCCCCAGCTCCCAGTGGTGGTACGGTCTCAACA +
Preference number: 5 (lower is better)
Translates to: FTSETRRRNVNEILR*TLTAPAPSGGTVST
Trigger: TGTTGAGACCGTACCACCACTGGGAGCTGGGGCGGTTAATGTTCATCGCAGTATTTCATTCACATTTCGTCTTCGTGTTTCAGATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GCACCAATAAGACTGGAGCACTTCAGAATTAGACAGCTGGGATGGAACTATAGAACAAGGTCCTACTTATaGCTTGCCCCAGAGAGTACT +
Preference number: 5 (lower is better)
Translates to: APIRLEHFRIRQLGWNYRTRSYL*LAPEST
Trigger: AGTACTCTCTGGGGCAAGCAATAAGTAGGACCTTGT...TCTATAGTTCCATCCCAGCTGTCTAATTCTGAAGTGCTCCAGTCTTATTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCTTTCAGCTCTCTTCTaGTGCGCTGTTGTCGACCCC +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGALSALF*CAVVDP
Trigger: GGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATCATTGGGATGTAATGTaGGGACATGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDHWDVM*GHVVQV
Trigger: GACTTGGACAACATGTCCCAACATTACATCCCAATG...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAACAGAGCGAGACTCCATaGGGATGTAATGTTGGGACA +
Preference number: 5 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKQSETP*GCNVGT
Trigger: TGTCCCAACATTACATCCCAATGGAGTCTCGCTCTG...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGAGAATGGTGTGAACTaGGGAGGCGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAENGVN*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCCAAGTTCACACCATTCTC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS-3UTR CAA 90 bp GCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTCCATTGGAAACAAGCACTaGTTTTCTTCTACCAGGATA +
Preference number: 5 (lower is better)
Translates to: AVPSAYTLERFSKLDSKSIGNKH*FSSTRI
Trigger: TATCCTGGTAGAAGAAAACAAGTGCTTGTTTCCAAT...GGACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GAGCAGTACCCAGTGCATATACTCTGGAGAGGTTCTCAAAGCTGGACAGTAAGTAGGGAGGGAGCACTTTaGTTTTCATTTAGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: EQYPVHILWRGSQSWTVSREGAL*FSFRKK
Trigger: CTTCTTTCTAAATGAAAACAAAAGTGCTCCCTCCCT...ACTTACTGTCCAGCTTTGAGAACCTCTCCAGAGTATATGCACTGGGTACTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTTGGGAGGAAAGCTGGTaGCTCCTAAACATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAWEESW*LLNMAS
Trigger: GGAAGCCATGTTTAGGAGCAACCAGCTTTCCTCCCA...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS GCA 90 bp TCTGTCATTAGTGACTGGACTTTTCCACACGTACAAGTATTTGTTTaGCTGCTCTGGGCAGAGCCATGGTATGATCAACCTTCAATCAAA +
Preference number: 5 (lower is better)
Translates to: SVISDWTFPHVQVFV*LLWAEPWYDQPSIK
Trigger: TTTGATTGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACTTGTACGTGTGGAAAAGTCCAGTCACTAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS CCA 90 bp CCTTTCCAAATTCTGGTCTACATCTCCTCAACTCAGCAAGACTATTaGACTATGTTTGGGTGTCCTCTCTTTGCACCATGGTCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: PFQILVYISSTQQDY*TMFGCPLFAPWSEN
Trigger: ATTTTCAGACCATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCTGAGTTGAGGAGATGTAGACCAGAATTTGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS-3UTR CAA 90 bp TTAATAGACTCTGTGGCTTCCCTTGACACTGGAGGATCTTTAAAATCCAGGTGTAAGTGGGATGTAATGTaGGGACATGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LIDSVASLDTGGSLKSRCKWDVM*GHVVQV
Trigger: GACTTGGACAACATGTCCCAACATTACATCCCACTT...ACACCTGGATTTTAAAGATCCTCCAGTGTCAAGGGAAGCCACAGAGTCTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp TCAGATATACATGTCTCTACAATGAAACTGCACACAAGGTCCTACTTATTGCTTCCACACTCTTCGAGCTaGAACATGTCCACCCAGATC +
Preference number: 5 (lower is better)
Translates to: SDIHVSTMKLHTRSYLLLPHSSS*NMSTQI
Trigger: GATCTGGGTGGACATGTTCAAGCTCGAAGAGTGTGG...AAGCAATAAGTAGGACCTTGTGTGCAGTTTCATTGTAGAGACATGTATATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGGCCTCCTTCTTGGCTaGATCACACTATTAACATGT +
Preference number: 5 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKGLLLG*ITLLTC
Trigger: ACATGTTAATAGTGTGATCAAGCCAAGAAGGAGGCC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 90 bp TGGTCCAAGCAAGCATTAGGTCATAGCCTGTTCCTCTTCCTTATTTaGAGGTGTTTTTACCTTTCTCAGCATTCCACAAGTTACTTCCTC +
Preference number: 5 (lower is better)
Translates to: WSKQALGHSLFLFLI*RCFYLSQHSTSYFL
Trigger: GAGGAAGTAACTTGTGGAATGCTGAGAAAGGTAAAAACACCTTCAAATAAGGAAGAGGAACAGGCTATGACCTAATGCTTGCTTGGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508363.5
ENST00000509730.5
CDS-3UTR CAA 90 bp ATCTGGAAGAAGAAATCAATAGGCTGCAATGTCATGTTCTACTTTTCCCATAGTGCACAGATTACCCCATaGGGCACCAATAAGACTGGA +
Preference number: 5 (lower is better)
Translates to: IWKKKSIGCNVMFYFSHSAQITP*GTNKTG
Trigger: TCCAGTCTTATTGGTGCCCAATGGGGTAATCTGTGC...ACTATGGGAAAAGTAGAACATGACATTGCAGCCTATTGATTTCTTCTTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGTCCTACTTATTGCTaGCCCCAGAGAGTACTGTTA +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAGPTYC*PQRVLL
Trigger: TAACAGTACTCTCTGGGGCAAGCAATAAGTAGGACC...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAATGGACAGTGCCTGATTaGTATGTATACCACAGTGTT +
Preference number: 5 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKWTVPD*YVYHSV
Trigger: AACACTGTGGTATACATACAAATCAGGCACTGTCCA...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp ATCAGTATAGGCACATTAGCAATGGTTTCATCTGTCATTAGTGACTGGACTTTTCCTTGCCTGCTGCTGTaGGGCCCCTTTACAAAATAT +
Preference number: 5 (lower is better)
Translates to: ISIGTLAMVSSVISDWTFPCLLL*GPFTKY
Trigger: ATATTTTGTAAAGGGGCCCAACAGCAGCAGGCAAGG...AAAAGTCCAGTCACTAATGACAGATGAAACCATTGCTAATGTGCCTATACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CAA 90 bp GTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGCATGTGTAGCAATGTaGTTTTTCCTTACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: VLQMYCWKVALYKWRWGDACVAM*FFLTVN
Trigger: GTTTACAGTAAGGAAAAACAACATTGCTACACATGC...ATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS GCA 90 bp GCTTTCAGTCACTTTTCTCTCTGTGCTTCATTCTGGAGTTTCTGTTaGATTGAGTTAAGTTTAGTGGTCTTTCTTTCTGCAGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: AFSHFSLCASFWSFC*IELSLVVFLSAVLA
Trigger: TGCCAGTACTGCAGAAAGAAAGACCACTAAACTTAACTCAATGCAACAGAAACTCCAGAATGAAGCACAGAGAGAAAAGTGACTGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS-3UTR CAA 90 bp AGTATAGGCACATTAGCAATGGTTTCATCTGTCATTAGTGACTGGACTTTTCCAAAGTGGGATGTAATGTaGGGACATGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SIGTLAMVSSVISDWTFPKWDVM*GHVVQV
Trigger: GACTTGGACAACATGTCCCAACATTACATCCCACTT...TGGAAAAGTCCAGTCACTAATGACAGATGAAACCATTGCTAATGTGCCTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS-3UTR CAA 90 bp ACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTGGGGTGATGTCAGATTATAAAGAAACAAAGTTGGCTTaGGATAACTTCGCTTACTTT +
Preference number: 5 (lower is better)
Translates to: TAGKLLFTNGAGVMSDYKETKLA*DNFAYF
Trigger: AAAGTAAGCGAAGTTATCCAAAGCCAACTTTGTTTC...TTTATAATCTGACATCACCCCAGCGCCATTTGTAAAGAGCAACTTTCCAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCTTAATTTGGTTCTCTaGAAAAAGAGCAGTACCCAG +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGALNLVL*KKSSTQ
Trigger: CTGGGTACTGCTCTTTTTCAAGAGAACCAAATTAAG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS TCA 90 bp AGCTCTAGTAATTATTTGGCTAACAGCATTCTTACAATTGTTCTTTaGCTAGCCTTTTGGAGCTTTACCCATTGCATGCACAGATTGGTA +
Preference number: 5 (lower is better)
Translates to: SSSNYLANSILTIVL*LAFWSFTHCMHRLV
Trigger: TACCAATCTGTGCATGCAATGGGTAAAGCTCCAAAAGGCTAGTCAAAGAACAATTGTAAGAATGCTGTTAGCCAAATAATTACTAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS-3UTR CAA 90 bp GTTAAAAAGTGCTTCAAATGTACTGCTGGAAAGTTGCTCTTTACAAATGGCGCTCAAAAGATGAGCCGGTaGAAAACTAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: VKKCFKCTAGKLLFTNGAQKMSR*KTKKET
Trigger: TGTTTCTTTCTTAGTTTTCAACCGGCTCATCTTTTG...AGCGCCATTTGTAAAGAGCAACTTTCCAGCAGTACATTTGAAGCACTTTTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS TCA 90 bp GCTAATTCCATCATCTTTGTCACACTTGTGTCTGTTTCTACTGACTaGATCACTTTCCTGTTTCTTTGCATGTCTAGTAATTTCATATTG +
Preference number: 5 (lower is better)
Translates to: ANSIIFVTLVSVSTD*ITFLFLCMSSNFIL
Trigger: CAATATGAAATTACTAGACATGCAAAGAAACAGGAAAGTGATTCAGTCAGTAGAAACAGACACAAGTGTGACAAAGATGATGGAATTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CCA 72 bp ACCAGGAGCTGTCAGGTGGCCTCGGGGCAGCCCGGCTaGCAGAGAAGAGTTCGCCGGCGCGGCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: TRSCQVASGQPG*QRRVRRRGGGC
Trigger: GCAGCCGCCGCCGCGCCGGCGAACTCTTCTCTGCCAGCCGGGCTGCCCCGAGGCCACCTGACAGCTCCTGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 72 bp TCCGTAGCGGTGACACACGGCACTTCCGGCCGGCCGTaGGAGTCGGTGACGTGGCGGCGAGGCCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: SVAVTHGTSGRP*ESVTWRRGRAR
Trigger: CCGTGCCCGGCCTCGCCGCCACGTCACCGACTCTCACGGCCGGCCGGAAGTGCCGTGTGTCACCGCTACGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 72 bp CTGCTGCGAGCCCGGAGCCGGAAGTGCCACGTGTCCTaGTTGCGGCTGCGCGGCCGGCGGCTGACAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLRARSRKCHVS*LRLRGRRLTGT
Trigger: AGTGCCTGTCAGCCGCCGGCCGCGCAGCCGCAATCAGGACACGTGGCACTTCCGGCTCCGGGCTCGCAGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp GCCCGACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTaGCCGCCGGTGGCCTGGGGAGAGTGCGGCGCCATG +
Preference number: 6 (lower is better)
Translates to: ARLSSLSSQARL*PPVAWGECGAM
Trigger: CATGGCGCCGCACTCTCCCCAGGCCACCGGCGGCCACAGCCTAGCCTGGGAGCTGAGGCTTGAGAGTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS GCA 72 bp CCTACTTGGCGTTGGCCGTACACCAGGAGACCGAACTaGAAAGCGCGATGGCTGCCGTGGCCCCAGTTCGCA +
Preference number: 6 (lower is better)
Translates to: PTWRWPYTRRPN*KARWLPWPQFA
Trigger: TGCGAACTGGGGCCACGGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402673.7
ENST00000502286.1
CDS CAA 90 bp CTGATAGGGTCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTaGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LIGSATGGNAIPYLA*AVHQETELQSAMAA
Trigger: GGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACCCTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS CAA 90 bp GAGGGAAACTCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTaGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: EGNSATGGNAIPYLA*AVHQETELQSAMAA
Trigger: GGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGAGTTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504242.1
CDS CCA 72 bp CTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTTaGCCGTACACCAGGAGACCGAACTGCAAAGCGCGA +
Preference number: 6 (lower is better)
Translates to: LRLEGTQSPTWR*PYTRRPNCKAR
Trigger: TCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402673.7
ENST00000502286.1
ENST00000504242.1
CDS CAA 72 bp TCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTaGGCCGTACACCAGGAGACCGAACTGCAAAGCGCG +
Preference number: 6 (lower is better)
Translates to: SATGGNAIPYLA*AVHQETELQSA
Trigger: CGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402673.7
ENST00000502286.1
ENST00000504242.1
CDS CAA 72 bp AGTCCCACCCCACGAAAGCGGCTACTGAATCTCAGATaGCCCCACGATCCTGGCTCTGCGAGCGAGGTCACG +
Preference number: 6 (lower is better)
Translates to: SPTPRKRLLNLR*PHDPGSASEVT
Trigger: CGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTGGGGTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CAA 90 bp GAAACTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTTGGCGTaGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ETLSATGGNAIPYLA*AVHQETELQSAMAA
Trigger: GGCAGCCATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS CCA 72 bp AAAGCGGCTACTGAATCTCAGATTGCCCCACGATCCTaGCTCTGCGAGCGAGGTCACGTTCACAACGGCGGG +
Preference number: 6 (lower is better)
Translates to: KAATESQIAPRS*LCERGHVHNGG
Trigger: CCCGCCGTTGTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CAA 90 bp GGAACTGTCAGTCCCACCCCACGAAAGCGGCTACTGAATCTCAGATaGCCCCACGATCCTGGCTCTGCGAGCGAGGTCACGTTCACAACG +
Preference number: 6 (lower is better)
Translates to: GTVSPTPRKRLLNLR*PHDPGSASEVTFTT
Trigger: CGTTGTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTGGGGTGGGACTGACAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CAA 90 bp CCAAATCTGATAGGGTCTGCGACTGGAGGGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATG +
Preference number: 6 (lower is better)
Translates to: PNLIGSATGGNAIPY*ALAVHQETELQSAM
Trigger: CATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACCCTATCAGATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS CAA 90 bp AAGAGGGAAACTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAGGAGACCGAACTGCAAAGCGCGATG +
Preference number: 6 (lower is better)
Translates to: KRETLSATGGNAIPY*ALAVHQETELQSAM
Trigger: CATCGCGCTTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAGTTTCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS CAA 90 bp CCTCCGCTTTCAGCAGTGGTCTTTCAGCTCTCTTCTTGTGCGCTGTaGTCGACCCCGACCAGCCCCTTCCAACCCAGTCATCATGTCCCA +
Preference number: 6 (lower is better)
Translates to: PPLSAVVFQLSSCAL*STPTSPFQPSHHVP
Trigger: TGGGACATGATGACTGGGTTGGAAGGGGCTGGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCACTGCTGAAAGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 72 bp GAGGAACTGTCAGTCCCACCCCACGAAAGCGGCTACTaGATCTCAGATTGCCCCACGATCCTGGCTCTGCGA +
Preference number: 6 (lower is better)
Translates to: EELSVPPHESGY*ISDCPTILALR
Trigger: TCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGCCGCTTTCGTGGGGTGGGACTGACAGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp CTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTTaGCGTTGGCCGTACACCAGGAGACCGAACTGCAAA +
Preference number: 6 (lower is better)
Translates to: LCLRLEGTQSPT*RWPYTRRPNCK
Trigger: TTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS CAA 72 bp ATAGGGTCTGCGACTGGAGGGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAGGAGACCGAACTGCAA +
Preference number: 6 (lower is better)
Translates to: IGSATGGNAIPY*ALAVHQETELQ
Trigger: TTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402673.7
CDS CAA 72 bp GGAAACTCTGCGACTGGAGGGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAGGAGACCGAACTGCAA +
Preference number: 6 (lower is better)
Translates to: GNSATGGNAIPY*ALAVHQETELQ
Trigger: TTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGAGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504242.1
CDS CAA 72 bp ACTCTGTCTGCGACTGGAGGGAACGCAATCCCCTACTaGGCGTTGGCCGTACACCAGGAGACCGAACTGCAA +
Preference number: 6 (lower is better)
Translates to: TLSATGGNAIPY*ALAVHQETELQ
Trigger: TTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGACAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502286.1
CDS GCA 72 bp GCTACTGAATCTCAGATTGCCCCACGATCCTGGCTCTaGGAGCGAGGTCACGTTCACAACGGCGGGAATTTC +
Preference number: 6 (lower is better)
Translates to: ATESQIAPRSWL*ERGHVHNGGNF
Trigger: GAAATTCCCGCCGTTGTGAACGTGACCTCGCTCGCAGAGCCAGGATCGTGGGGCAATCTGAGATTCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp GAAACTCTGCGACTGGAGGGAACGCAATCCCCTACTTaGCGTTGGCCGTACACCAGGAGACCGAACTGCAAA +
Preference number: 6 (lower is better)
Translates to: ETLRLEGTQSPT*RWPYTRRPNCK
Trigger: TTTGCAGTTCGGTCTCCTGGTGTACGGCCAACGCCAAGTAGGGGATTGCGTTCCCTCCAGTCGCAGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504242.1
CDS CAA 72 bp TCAGCAGTGGTCTTTCAGCTCTCTTCTTGTGCGCTGTaGTCGACCCCGACCAGCCCCTTCCAACCCAGTCAT +
Preference number: 6 (lower is better)
Translates to: SAVVFQLSSCAL*STPTSPFQPSH
Trigger: ATGACTGGGTTGGAAGGGGCTGGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCACTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp CTTAAGTCGTTAGCCTCCTCCCTCCGCTTTCAGCAGTaGTCTTTCAGCTCTCTTCTTGTGCGCTGTTGTCGA +
Preference number: 6 (lower is better)
Translates to: LKSLASSLRFQQ*SFSSLLVRCCR
Trigger: TCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCACTGCTGAAAGCGGAGGGAGGAGGCTAACGACTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp GGACAAATACAGAATGTGAGGTCCCATTCCAGCCAATaGAAACCGGACACAGCAGTAGGGTGGACGCATCAG +
Preference number: 6 (lower is better)
Translates to: GQIQNVRSHSSQ*KPDTAVGWTHQ
Trigger: CTGATGCGTCCACCCTACTGCTGTGTCCGGTTTCCATTGGCTGGAATGGGACCTCACATTCTGTATTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp AGCTCCCAGTGGTGGTACGGTCTCAACAGAGGACGATaGCTTCTATGGTCTCAGGTAATCTTCACAAAACCC +
Preference number: 6 (lower is better)
Translates to: SSQWWYGLNRGR*LLWSQVIFTKP
Trigger: GGGTTTTGTGAAGATTACCTGAGACCATAGAAGTCATCGTCCTCTGTTGAGACCGTACCACCACTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS TCA 72 bp GGACACAGCAGTAGGGTGGACGCATCAGATTATAAATaGCCCTGTCTCCTTTGTTCGGTGTACTCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: GHSSRVDASDYK*PCLLCSVYSCG
Trigger: GCCACAAGAGTACACCGAACAAAGGAGACAGGGTCATTTATAATCTGATGCGTCCACCCTACTGCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CCA 72 bp GCAGAGCCATGGTATGATCAACCTTCAATCAAATCATaGACCTGCTTACTCTGTGGCCCCAGATCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: AEPWYDQPSIKS*TCLLCGPRSGA
Trigger: AGCACCAGATCTGGGGCCACAGAGTAAGCAGGTCCATGATTTGATTGAAGGTTGATCATACCATGGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS TCA 72 bp GAAACACGAAGACGAAATGTGAATGAAATACTGCGATaGACATTAACCGCCCCAGCTCCCAGTGGTGGTACG +
Preference number: 6 (lower is better)
Translates to: ETRRRNVNEILR*TLTAPAPSGGT
Trigger: CGTACCACCACTGGGAGCTGGGGCGGTTAATGTTCATCGCAGTATTTCATTCACATTTCGTCTTCGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CCA 72 bp TCATGCCAGCAATGGTCAGTTCTTCGGAAGTTACACTaGTCCAAGCAAGCATTAGGTCATAGCCTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: SCQQWSVLRKLH*SKQALGHSLFL
Trigger: GAGGAACAGGCTATGACCTAATGCTTGCTTGGACCAGTGTAACTTCCGAAGAACTGACCATTGCTGGCATGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502539.5
CDS TCA 72 bp GTGGCAAAGTCCTCACTGAAGATGATTGTTGGTAGGTaGGAGCTAAAGAATGGTGAAAAGCCTGCGACTGGA +
Preference number: 6 (lower is better)
Translates to: VAKSSLKMIVGR*ELKNGEKPATG
Trigger: TCCAGTCGCAGGCTTTTCACCATTCTTTAGCTCTCACCTACCAACAATCATCTTCAGTGAGGACTTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505758.5
CDS TCA 72 bp TCTAAGTTGCTAGCCAATCAGGACAAATACAGAATGTaGGGTCCCATTCCAGCCAATGGAAACCGGACACAG +
Preference number: 6 (lower is better)
Translates to: SKLLANQDKYRM*GPIPANGNRTQ
Trigger: CTGTGTCCGGTTTCCATTGGCTGGAATGGGACCTCACATTCTGTATTTGTCCTGATTGGCTAGCAACTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS GCA 72 bp TTTCTTTCTCCTCCCTTCCACTTCTGGGACTTCAGTTaGAGGTTTGTTAGACTGCCTGATGTTGTCTCACCA +
Preference number: 6 (lower is better)
Translates to: FLSPPFHFWDFS*RFVRLPDVVSP
Trigger: TGGTGAGACAACATCAGGCAGTCTAACAAACCTGCAACTGAAGTCCCAGAAGTGGAAGGGAGGAGAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CCA 72 bp ATTCTGGTCTACATCTCCTCAACTCAGCAAGACTATTaGACTATGTTTGGGTGTCCTCTCTTTGCACCATGG +
Preference number: 6 (lower is better)
Translates to: ILVYISSTQQDY*TMFGCPLFAPW
Trigger: CCATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCTGAGTTGAGGAGATGTAGACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 90 bp TTCTGGTCTACATCTCCTCAACTCAGCAAGACTATTGGACTATGTTaGGGTGTCCTCTCTTTGCACCATGGTCTGAAAATTACCTCTTGG +
Preference number: 6 (lower is better)
Translates to: FWSTSPQLSKTIGLC*GVLSLHHGLKITSW
Trigger: CCAAGAGGTAATTTTCAGACCATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCTGAGTTGAGGAGATGTAGACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 90 bp TCCACTTCTGGGACTTCAGTTGCAGGTTTGTTAGACTGCCTGATGTaGTCTCACCAGTCATTGAGGCTCTGTTTATTTTGCTTTCAGTCA +
Preference number: 6 (lower is better)
Translates to: STSGTSVAGLLDCLM*SHQSLRLCLFCFQS
Trigger: TGACTGAAAGCAAAATAAACAGAGCCTCAATGACTGGTGAGACAACATCAGGCAGTCTAACAAACCTGCAACTGAAGTCCCAGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp AGTATTTGTTTGCCTGCTCTGGGCAGAGCCATGGTATaGTCAACCTTCAATCAAATCATGGACCTGCTTACT +
Preference number: 6 (lower is better)
Translates to: SICLPALGRAMV*STFNQIMDLLT
Trigger: AGTAAGCAGGTCCATGATTTGATTGAAGGTTGATCATACCATGGCTCTGCCCAGAGCAGGCAAACAAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503318.5
CDS CAA 72 bp AATTCTGGTCTACATCTCCTCAACTCAGCAAGACTATaGGACTATGTTTGGGTGTCCTCTCTTTGCACCATG +
Preference number: 6 (lower is better)
Translates to: NSGLHLLNSARL*DYVWVSSLCTM
Trigger: CATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCTGAGTTGAGGAGATGTAGACCAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp GCTGTGAATCAGCGAGTTTCAAAATTAAAATTCCTCTaGGTCCTCCAGTCAAAGACAAAGGCCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: AVNQRVSKLKFL*VLQSKTKASFL
Trigger: CAAGAAGGAGGCCTTTGTCTTTGACTGGAGGACTCAGAGGAATTTTAATTTTGAAACTCGCTGATTCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CAA 72 bp ACATCTCCTCAACTCAGCAAGACTATTGGACTATGTTaGGGTGTCCTCTCTTTGCACCATGGTCTGAAAATT +
Preference number: 6 (lower is better)
Translates to: TSPQLSKTIGLC*GVLSLHHGLKI
Trigger: AATTTTCAGACCATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCTGAGTTGAGGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 90 bp AGACTGCCTGATGTTGTCTCACCAGTCATTGAGGCTCTGTTTATTTaGCTTTCAGTCACTTTTCTCTCTGTGCTTCATTCTGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: RLPDVVSPVIEALFI*LSVTFLSVLHSGVS
Trigger: AGAAACTCCAGAATGAAGCACAGAGAGAAAAGTGACTGAAAGCAAAATAAACAGAGCCTCAATGACTGGTGAGACAACATCAGGCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 72 bp AGCAAGACTATTGGACTATGTTTGGGTGTCCTCTCTTaGCACCATGGTCTGAAAATTACCTCTTGGCATAAA +
Preference number: 6 (lower is better)
Translates to: SKTIGLCLGVLS*HHGLKITSWHK
Trigger: TTTATGCCAAGAGGTAATTTTCAGACCATGGTGCAAAGAGAGGACACCCAAACATAGTCCAATAGTCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CCA 72 bp TCTGAGTCCTCCAGTCAAAGACAAAGGCCTCCTTCTTaGCTTGATCACACTATTAACATGTACACATATTTA +
Preference number: 6 (lower is better)
Translates to: SESSSQRQRPPS*LDHTINMYTYL
Trigger: TAAATATGTGTACATGTTAATAGTGTGATCAAGCCAAGAAGGAGGCCTTTGTCTTTGACTGGAGGACTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507419.5
CDS CAA 90 bp AAACTGCTGGCAAGTGTACCCTTTCTGCAGAAAGTAAAAATGGCCTaGCTGAGGAAATTAAATTTATGTTCAAGTGCTATCCTTTACAGC +
Preference number: 6 (lower is better)
Translates to: KLLASVPFLQKVKMA*LRKLNLCSSAILYS
Trigger: GCTGTAAAGGATAGCACTTGAACATAAATTTAATTTCCTCAGCAAGGCCATTTTTACTTTCTGCAGAAAGGGTACACTTGCCAGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp TTCTCTCTGTGCTTCATTCTGGAGTTTCTGTTGCATTaGGTTAAGTTTAGTGGTCTTTCTTTCTGCAGTACT +
Preference number: 6 (lower is better)
Translates to: FSLCFILEFLLH*VKFSGLSFCST
Trigger: AGTACTGCAGAAAGAAAGACCACTAAACTTAACTCAATGCAACAGAAACTCCAGAATGAAGCACAGAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CCA 72 bp TTTGCTTTCAGTCACTTTTCTCTCTGTGCTTCATTCTaGAGTTTCTGTTGCATTGAGTTAAGTTTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: FAFSHFSLCASF*SFCCIELSLVV
Trigger: GACCACTAAACTTAACTCAATGCAACAGAAACTCCAGAATGAAGCACAGAGAGAAAAGTGACTGAAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 90 bp CATTCTTACAATTGTTCTTTGACTAGCCTTTTGGAGCTTTACCCATaGCATGCACAGATTGGTATTCAGCTATGTAAATTTCTAGAGTCC +
Preference number: 6 (lower is better)
Translates to: HSYNCSLTSLLELYP*HAQIGIQLCKFLES
Trigger: GGACTCTAGAAATTTACATAGCTGAATACCAATCTGTGCATGCAATGGGTAAAGCTCCAAAAGGCTAGTCAAAGAACAATTGTAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp AATTATTTGGCTAACAGCATTCTTACAATTGTTCTTTaGCTAGCCTTTTGGAGCTTTACCCATTGCATGCAC +
Preference number: 6 (lower is better)
Translates to: NYLANSILTIVL*LAFWSFTHCMH
Trigger: GTGCATGCAATGGGTAAAGCTCCAAAAGGCTAGTCAAAGAACAATTGTAAGAATGCTGTTAGCCAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS CAA 90 bp ATTGTCTTATGTCTTAATCTGCTAATTCCATCATCTTTGTCACACTaGTGTCTGTTTCTACTGACTGAATCACTTTCCTGTTTCTTTGCA +
Preference number: 6 (lower is better)
Translates to: IVLCLNLLIPSSLSH*CLFLLTESLSCFFA
Trigger: TGCAAAGAAACAGGAAAGTGATTCAGTCAGTAGAAACAGACACAAGTGTGACAAAGATGATGGAATTAGCAGATTAAGACATAAGACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5
CDS TCA 72 bp ATCATCTTTGTCACACTTGTGTCTGTTTCTACTGACTaGATCACTTTCCTGTTTCTTTGCATGTCTAGTAAT +
Preference number: 6 (lower is better)
Translates to: IIFVTLVSVSTD*ITFLFLCMSSN
Trigger: ATTACTAGACATGCAAAGAAACAGGAAAGTGATTCAGTCAGTAGAAACAGACACAAGTGTGACAAAGATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508363.5