RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAP30L (Homo sapiens)

Ensembl gene IDs: ENSG00000164576

Ensembl transcript IDs: ENST00000297109.11, ENST00000426761.2, ENST00000440364.6, ENST00000517926.1, ENST00000519683.1, ENST00000520159.1, ENST00000520731.1, ENST00000523029.5, ENST00000523198.5

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGAGCCCAGGGAGTCAAGGCCAGCCAGACTTTCAATCCTAAGCTaGACTTCTGGGCAGGAATCACATGGCCCCTGGCAGCTTGCATGG +
Preference number: 1 (lower is better)
Translates to: PEPRESRPARLSILS*TSGQESHGPWQLAW
Trigger: CCATGCAAGCTGCCAGGGGCCATGTGATTCCTGCCCAGAAGTTCAGCTTAGGATTGAAAGTCTGGCTGGCCTTGACTCCCTGGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp ACCCCTAGAGCACCATGCTTCCCAAGGCATGATCTTGAGCTCATCTaGCCTTCGGTTCGACTGCCCAGCTCAGTAACAGGGACCAGGAGC +
Preference number: 1 (lower is better)
Translates to: TPRAPCFPRHDLELI*PSVRLPSSVTGTRS
Trigger: GCTCCTGGTCCCTGTTACTGAGCTGGGCAGTCGAACCGAAGGGCAGATGAGCTCAAGATCATGCCTTGGGAAGCATGGTGCTCTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTaGGTCTGCTCATGCACTTCCATGGCCAATTGCACCTTGCTGCTA +
Preference number: 1 (lower is better)
Translates to: GGISMSPAGSMQVQM*VCSCTSMANCTLLL
Trigger: TAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp CAGGGAGTCAAGGCCAGCCAGACTTTCAATCCTAAGCTGAACTTCTaGGCAGGAATCACATGGCCCCTGGCAGCTTGCATGGTGGTTGTG +
Preference number: 1 (lower is better)
Translates to: QGVKASQTFNPKLNF*AGITWPLAACMVVV
Trigger: CACAACCACCATGCAAGCTGCCAGGGGCCATGTGATTCCTGCCCAGAAGTTCAGCTTAGGATTGAAAGTCTGGCTGGCCTTGACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATaGACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACA +
Preference number: 1 (lower is better)
Translates to: MSPAGSMQVQMWVCS*TSMANCTLLLFQAT
Trigger: TGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp AGATGTGGGTCTGCTCATGCACTTCCATGGCCAATTGCACCTTGCTaGTATTCCAAGCTACAGCTCACACGTGGCAGCCTGGTGGATAAG +
Preference number: 1 (lower is better)
Translates to: RCGSAHALPWPIAPC*YSKLQLTRGSLVDK
Trigger: CTTATCCACCAGGCTGCCACGTGTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp GAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATGACAAAGCTTaGAACAAAGCGGGCGGGATATCTATGTCGCCAGCGGGCAGCATG +
Preference number: 1 (lower is better)
Translates to: EGDQCQTDLLINDKA*NKAGGISMSPAGSM
Trigger: CATGCTGCCCGCTGGCGACATAGATATCCCGCCCGCTTTGTTGCAAGCTTTGTCATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp GCTGCTACGTCACAGGTGGAGAGAAGCGCAAGAGTCCTTGATGGATaGTATAAAAATGGAGCAGCCAAGATGAACATTGCTTTCCCCACA +
Preference number: 1 (lower is better)
Translates to: AATSQVERSARVLDG*YKNGAAKMNIAFPT
Trigger: TGTGGGGAAAGCAATGTTCATCTTGGCTGCTCCATTTTTATACCATCCATCAAGGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp CCAGAAGCACCAAGAGGAAAGAAGGCAATGCTGCTACGTCACAGGTaGAGAGAAGCGCAAGAGTCCTTGATGGATGGTATAAAAATGGAG +
Preference number: 1 (lower is better)
Translates to: PEAPRGKKAMLLRHR*REAQESLMDGIKME
Trigger: CTCCATTTTTATACCATCCATCAAGGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAGCATTGCCTTCTTTCCTCTTGGTGCTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 90 bp CTTAACAGCCCTTTCCCAACTTTGAGATCCTGTCATTGTAATGACTaGGAGCGCCTTTGGATGACTTCCATGAAGCAACTGCTCTGGGCA +
Preference number: 1 (lower is better)
Translates to: LNSPFPTLRSCHCND*ERLWMTSMKQLLWA
Trigger: TGCCCAGAGCAGTTGCTTCATGGAAGTCATCCAAAGGCGCTCTCAGTCATTACAATGACAGGATCTCAAAGTTGGGAAAGGGCTGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp GGCTGCAATCTGCTAGACATGCATTTTGAACACAGGCGAAAGCTTTaGTGCAATGGAACATACTGCATTTTAGTGAGCGTGGTGACCCTG +
Preference number: 1 (lower is better)
Translates to: GCNLLDMHFEHRRKL*CNGTYCILVSVVTL
Trigger: CAGGGTCACCACGCTCACTAAAATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGTTCAAAATGCATGTCTAGCAGATTGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp TGCAATCTGCTAGACATGCATTTTGAACACAGGCGAAAGCTTTGCTaGAATGGAACATACTGCATTTTAGTGAGCGTGGTGACCCTGTCC +
Preference number: 1 (lower is better)
Translates to: CNLLDMHFEHRRKLC*NGTYCILVSVVTLS
Trigger: GGACAGGGTCACCACGCTCACTAAAATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGTTCAAAATGCATGTCTAGCAGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp GAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCCAGTTCTaGATTTCAAATTCCAGTTTTGCCCAGAAGCACCAAGAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: ELRQEPYSLRRQRQF*ISNSSFAQKHQEER
Trigger: TCTTTCCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAAATCCAGAACTGGCGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 90 bp ATTAAGAGCAAAAGTCGGGCCATCCCATCGTGTGATATTGCAACATaGAAAGTCACATACATACTAAGGAGACCCCACAGAATTGAGAGC +
Preference number: 1 (lower is better)
Translates to: IKSKSRAIPSCDIAT*KVTYILRRPHRIES
Trigger: GCTCTCAATTCTGTGGGGTCTCCTTAGTATGTATGTGACTTTTCATGTTGCAATATCACACGATGGGATGGCCCGACTTTTGCTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 90 bp GCACTGGACATGCCATCCACAGCCAGGAGGCATACCAAAATAGGATaGCCTCACAGTCCAGAGTATATTCTATATACAACCATTTATATA +
Preference number: 1 (lower is better)
Translates to: ALDMPSTARRHTKIG*PHSPEYILYTTIYI
Trigger: TATATAAATGGTTGTATATAGAATATACTCTGGACTGTGAGGGCATCCTATTTTGGTATGCCTCCTGGCTGTGGATGGCATGTCCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 90 bp TGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTaGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACC +
Preference number: 1 (lower is better)
Translates to: CRHFYLKNSSYLALG*VLPQNTRPTLPFLT
Trigger: GGTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 90 bp GTGTTTCTGGAACCTCAACGAATAGTTTTGCACATGCAACTGTCCTaGAATCCTTATCTGATCAGAAACTTCCTTGTTGGTGCATCAGGA +
Preference number: 1 (lower is better)
Translates to: VFLEPQRIVLHMQLS*NPYLIRNFLVGASG
Trigger: TCCTGATGCACCAACAAGGAAGTTTCTGATCAGATAAGGATTTCAGGACAGTTGCATGTGCAAAACTATTCGTTGAGGTTCCAGAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 90 bp TCTCTCAACTGGGAAAACAGATTTGCTGCTAAAGAAATAGTGATGTaGCCTACACGCCCACAATTCTGGTTTACGTATCAGAAAAATACA +
Preference number: 1 (lower is better)
Translates to: SLNWENRFAAKEIVM*PTRPQFWFTYQKNT
Trigger: TGTATTTTTCTGATACGTAAACCAGAATTGTGGGCGTGTAGGTCACATCACTATTTCTTTAGCAGCAAATCTGTTTTCCCAGTTGAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 90 bp ATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGTGAAAGCAACTaGAGGGTTTGTGTTTTAAGATGCAAGCTAGATGAAACAACTGAC +
Preference number: 1 (lower is better)
Translates to: ITLCHWQMCALSESN*RVCVLRCKLDETTD
Trigger: GTCAGTTGTTTCATCTAGCTTGCATCTTAAAACACAAACCCTTCAGTTGCTTTCACTTAATGCACACATTTGCCAATGACAGAGGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCTACCCCATACCCTCTaGCCTCCATTACACAGATTA +
Preference number: 2 (lower is better)
Translates to: LLHRTETFGHSAALLSRGLPHTL*PPLHRL
Trigger: TAATCTGTGTAATGGAGGGCAGAGGGTATGGGGTAG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 90 bp CATTCCACAGAAAGCGTGGTACTCTGCTCCACAGAACTGAGACCTTaGGACACTCCGCCGCCCTGCTCAGTAGGGGGTTTAGTCCTGACT +
Preference number: 2 (lower is better)
Translates to: HSTESVVLCSTELRP*DTPPPCSVGGLVLT
Trigger: AGTCAGGACTAAACCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAGAGTACCACGCTTTCTGTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCAGAAACTTCCTTGTTaGTGCATCAGGATTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LLHRTETFGHSAALLSRGQKLPC*CIRISS
Trigger: GGAGGAAATCCTGATGCACCAACAAGGAAGTTTCTG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTCTGCACCCCAAAGAGTaGAGCATAGTGGGGTGCATA +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSLHPKE*SIVGCI
Trigger: TATGCACCCCACTATGCTTCACTCTTTGGGGTGCAG...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGAAACTTCCTTGTTGGTaGATCAGGATTTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: LLHRTETFGHSAALLSRGKLPCW*IRISST
Trigger: TGTGGAGGAAATCCTGATGCACCAACAAGGAAGTTT...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATCTGCAGGTTGGTCCCTaGGAGCTAGGTTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLQVGP*ELGWPW
Trigger: CCAAGGCCAACCTAGCTCTCAGGGACCAACCTGCAG...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTTGCTCTGGAGGGCCTaGCCACTTCTCACAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLLWRA*PLLTGR
Trigger: CCTGCCTGTGAGAAGTGGCCAGGCCCTCCAGAGCAA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCGTACAAGGCACAGGGTaGGTGAGGGGGACCAGTGTC +
Preference number: 2 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFVQGTG*VRGTSV
Trigger: GACACTGGTCCCCCTCACTCACCCTGTGCCTTGTAC...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTGGACCGTATCTTCTGTaGGGGTCTCTATATCAGTGT +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSGPYLL*GSLYQC
Trigger: ACACTGATATAGAGACCCTCACAGAAGATACGGTCC...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTGGCCAATTGCACCTTaGTGCTATTCCAAGCTACAG +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSWPIAP*CYSKLQ
Trigger: CTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCCGCCAGCGGGCAGCATaGAAGTCCAGATGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFRQRAA*KSRCGS
Trigger: AGACCCACATCTGGACTTGCATGCTGCCCGCTGGCG...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGTTCCCCACACCCCACTaGTCCCTGAAGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWFPTPH*SLKPDP
Trigger: GGGGTCTGGCTTCAGGGAGCAGTGGGGTGTGGGGAA...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTACCTACTGATTGAGTaGCTACTGTGTACAAGGCAC +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSYLLIE*LLCTRH
Trigger: GTGCCTTGTACACAGTAGGCACTCAATCAGTAGGTA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACGATCTTGAGCTCATCTaGCCTTCGGTTCGACTGCCC +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNDLELI*PSVRLP
Trigger: GGGCAGTCGAACCGAAGGGCAGATGAGCTCAAGATC...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCTGGGCAGGAATCACATaGCCCCTGGCAGCTTGCATG +
Preference number: 2 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFWAGIT*PLAACM
Trigger: CATGCAAGCTGCCAGGGGCCATGTGATTCCTGCCCA...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCTGCTACGTCACAGGTaGAGAGAAGCGCAAGAGTCC +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNLLRHR*REAQES
Trigger: GGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTGCAATGGAACATACTaGATTTTAGTGAGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSCNGTY*ILVSVV
Trigger: CACCACGCTCACTAAAATGCAGTATGTTCCATTGCA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTAAAAGGTTGAAAAGATaGCCACAACCTCCACTTTCC +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSKRLKR*PQPPLS
Trigger: GGAAAGTGGAGGTTGTGGGCATCTTTTCAACCTTTT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATATGCAAGTCCAGATGTaGGTCTGCTCATGCACTTCC +
Preference number: 2 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINMQVQM*VCSCTS
Trigger: GGAAGTGCATGAGCAGACCCACATCTGGACTTGCAT...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 90 bp AATGAGCATCAGATGGAATTGACCTTTGTTGCCCAAACTCATGATTaGCTGATGACCAGAGCCCAGGGAGTCAAGGCCAGCCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: NEHQMELTFVAQTHD*LMTRAQGVKASQTF
Trigger: GAAAGTCTGGCTGGCCTTGACTCCCTGGGCTCTGGTCATCAGCAAATCATGAGTTTGGGCAACAAAGGTCAATTCCATCTGATGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGATGGAGCAGCCAAGATaGACATTGCTTTCCCCACAC +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTMEQPR*TLLSPH
Trigger: GTGTGGGGAAAGCAATGTTCATCTTGGCTGCTCCAT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATATGAAGCAACTGCTCTaGGCAACAGCCTCCCTCAAT +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHMKQLL*ATASLN
Trigger: ATTGAGGGAGGCTGTTGCCCAGAGCAGTTGCTTCAT...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTTGAGTTCTGCAGGTTaGTCCCTGAGAGCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLSSAG*SLRARL
Trigger: CAACCTAGCTCTCAGGGACCAACCTGCAGAACTCAA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATATCTGCTCCACAGAACTaGGACCTTTGGACACTCCGC +
Preference number: 2 (lower is better)
Translates to: CLYQHPSAVSRERISKHISAPQN*DLWTLR
Trigger: GCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAGA...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAGTCCAGATGTGGGTCTaGTCATGCACTTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: CLYQHPSAVSRERISKHIVQMWV*SCTSMA
Trigger: GGCCATGGAAGTGCATGAGCAGACCCACATCTGGAC...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGTGGCCCCTGGCAGCTTaGATGGTGGTTGTGAACTTA +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWWPLAA*MVVVNL
Trigger: TAAGTTCACAACCACCATGCAAGCTGCCAGGGGCCA...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGAACAATGCCTTAACCTaGAGGCCCCATCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: WILPSYILVQKLLSLSTGNNALT*RPHLPL
Trigger: GAGGGGCAGATGGGGCCTGCAGGTTAAGGCATTGTT...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTATATGGACATTTCCATaGAGCAAGTTAACAATGCCT +
Preference number: 2 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSIWTFP*SKLTMP
Trigger: AGGCATTGTTAACTTGCTCCATGGAAATGTCCATAT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 90 bp TACTCAGGGGTAAGGACAGTGTACCAAAGTGTCCATGTCCTAGCATaGTTTCTTTCCAAAAGGCAAACGCTATGCTTTGGGACAGTGCCA +
Preference number: 2 (lower is better)
Translates to: YSGVRTVYQSVHVLA*FLSKRQTLCFGTVP
Trigger: TGGCACTGTCCCAAAGCATAGCGTTTGCCTTTTGGAAAGAAACAATGCTAGGACATGGACACTTTGGTACACTGTCCTTACCCCTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCTTTCAATCCTAAGCTaGACTTCTGGGCAGGAATCA +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTLSILS*TSGQES
Trigger: TGATTCCTGCCCAGAAGTTCAGCTTAGGATTGAAAG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTCTCACCTGACCTGTTaGAAGGTCAGATTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHSHLTC*KVRLKR
Trigger: CCTTTTCAATCTGACCTTTCAACAGGTCAGGTGAGA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGATCTGTGAAACTCTCTaGCAGGCCAGGCTGTCCATT +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWICETL*QARLSI
Trigger: AATGGACAGCCTGGCCTGGCAGAGAGTTTCACAGAT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGGAAAGCGTGGTACTCTaGTCCACAGAACTGAGACCT +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWESVVL*STELRP
Trigger: AGGTCTCAGTTCTGTGGAGCAGAGTACCACGCTTTC...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGAATCACATGGCCCCTaGCAGCTTGCATGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKESHGP*QLAWWL
Trigger: CAACCACCATGCAAGCTGCCAGGGGCCATGTGATTC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAACACTCACAGAGCACTaGACATGCCATCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: CLYQHPSAVSRERISKHITLTEH*TCHPQP
Trigger: TGGCTGTGGATGGCATGTCCAGTGCTCTGTGAGTGT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGAGATTAAGTCATCTGTaGAACTCTCTGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWRLSHL*NSLPGQ
Trigger: CTGGCCTGGCAGAGAGTTTCACAGATGACTTAATCT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACAAAGAAATAGTGATGTaGCCTACACGCCCACAATTC +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNKEIVM*PTRPQF
Trigger: GAATTGTGGGCGTGTAGGTCACATCACTATTTCTTT...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACTTAGACCTTAAGTCCTaGAGCGTTGTTTTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNLDLKS*SVVFSA
Trigger: TGCTGAGAAAACAACGCTTCAGGACTTAAGGTCTAA...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCATACCAAAATAGGATaGCCTCACAGTCCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNHTKIG*PHSPEY
Trigger: ATACTCTGGACTGTGAGGGCATCCTATTTTGGTATG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACTTCAAATTCCAGTTTTaGCCAGAAGCACCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNFKFQF*PEAPRG
Trigger: TCCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAA...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGACACATGCTGAATCATaGGAATATAATCCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTTHAES*EYNPPD
Trigger: GTCAGGAGGATTATATTCTCATGATTCAGCATGTGT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGTGTTGCCCAAACTCATaGTTTGCTGATGACCAGAGC +
Preference number: 2 (lower is better)
Translates to: WILPSYILVQKLLSLSTGCCPNS*FADDQS
Trigger: GCTCTGGTCATCAGCAAATCATGAGTTTGGGCAACA...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCCAATTGCACCTTGCTaGTATTCCAAGCTACAGCTC +
Preference number: 2 (lower is better)
Translates to: WILPSYILVQKLLSLSTGPIAPC*YSKLQL
Trigger: GAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCATAAATGACAAAGCTTaGAACAAAGCGGGCGGGATA +
Preference number: 2 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFINDKA*NKAGGI
Trigger: TATCCCGCCCGCTTTGTTGCAAGCTTTGTCATTTAT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGGTCATAATATCTAACTaGACCCCAAAGAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTVIISN*TPKSEA
Trigger: TGCTTCACTCTTTGGGGTGCAGTTAGATATTATGAC...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCACAGGCGAAAGCTTTaGTGCAATGGAACATACTGC +
Preference number: 2 (lower is better)
Translates to: WILPSYILVQKLLSLSTGHRRKL*CNGTYC
Trigger: GCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATAACACCAAAATTAGATaGAACACTGCAGCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: KGSPGRQISDQEITDQAHNTKIR*NTAAAN
Trigger: GTTTGCAGCTGCAGTGTTGCATCTAATTTTGGTGTT...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 90 bp CTAAGAGGGAGGCAAATTGTTCACAAAAATGAGCATCAGATGGAATaGACCTTTGTTGCCCAAACTCATGATTTGCTGATGACCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LRGRQIVHKNEHQME*TFVAQTHDLLMTRA
Trigger: GGCTCTGGTCATCAGCAAATCATGAGTTTGGGCAACAAAGGTCAATTCCATCTGATGCTCATTTTTGTGAACAATTTGCCTCCCTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGCTCAATCTTGAGTTCTaGAGGTTGGTCCCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: CKRRILYNPLSLANVCIKLNLEF*RLVPES
Trigger: GCTCTCAGGGACCAACCTGCAGAACTCAAGATTGAG...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGAGAGTCCTTGATGGATaGTATAAAAATGGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWRVLDG*YKNGAA
Trigger: GGCTGCTCCATTTTTATACCATCCATCAAGGACTCT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCAGTAGATATCACCTGTaGATCAAGCATTACACTTCA +
Preference number: 2 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFSRYHL*IKHYTS
Trigger: TGAAGTGTAATGCTTGATGCACAGGTGATATCTACT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGATGTCAGTGTGTCAATaGATTTATTACCAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTMSVCQ*IYYQEA
Trigger: AGCTTCTTGGTAATAAATGCATTGACACACTGACAT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGAGGCGAAAGCTTTGCTaGAATGGAACATACTGCATT +
Preference number: 2 (lower is better)
Translates to: WILPSYILVQKLLSLSTGRRKLC*NGTYCI
Trigger: AATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCT...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCATCATATATTCTTGTaGAGAAGCTATTGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTHHIFL*RSYCLS
Trigger: AGAGAGACAATAGCTTCTGCACAAGAATATATGATG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGGTGCCAGCAATTAGGTaGTTTGCCAAAAATAACTTG +
Preference number: 2 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWVPAIR*FAKNNL
Trigger: CAAGTTATTTTTGGCAAAGCACCTAATTGCTGGCAC...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACTAAGGTACAAGCCCTaGGCAACCATGAAAACTTTA +
Preference number: 2 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKLRYKP*ATMKTL
Trigger: TAAAGTTTTCATGGTTGCCCAGGGCTTGTACCTTAG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACATAGTGAATGTGAATaGCTGAAAACACTCACAGAG +
Preference number: 2 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKHSECE*LKTLTE
Trigger: CTCTGTGAGTGTTTTCAGTCATTCACATTCACTATG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAAATGTGTGCATTAAGTaGAAGCAACTGAAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKNVCIK*KQLKGL
Trigger: CAAACCCTTCAGTTGCTTTCACTTAATGCACACATT...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 90 bp CTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCATAAACTaGGAAACAGTCTATAATACAATGAAAGGAATAAAAAGGCACCCC +
Preference number: 2 (lower is better)
Translates to: LPQNTRPTLPFLTIN*ETVYNTMKGIKRHP
Trigger: GGGGTGCCTTTTTATTCCTTTCATTGTATTATAGACTGTTTCCAAGTTTATGGTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGATGCAACACTGCAGCTaGAAACAATTGTTACTATCT +
Preference number: 2 (lower is better)
Translates to: CKRRILYNPLSLANVCIKMQHCS*KQLLLS
Trigger: AGATAGTAACAATTGTTTGCAGCTGCAGTGTTGCAT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAATTACTCATTAAGATATaGACATTTCCATGGAGCAAG +
Preference number: 2 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKLLIKI*TFPWSK
Trigger: CTTGCTCCATGGAAATGTCCATATCTTAATGAGTAA...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGGCCCAAACTCATGATTaGCTGATGACCAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LLHRTETFGHSAALLSRGAQTHD*LMTRAQ
Trigger: CTGGGCTCTGGTCATCAGCAAATCATGAGTTTGGGC...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp AAGCGGGCGGGATATCTATGTCGCCAGCGGGCAGCATaGAAGTCCAGATGTGGGTCTGCTCATGCACTTCCA +
Preference number: 3 (lower is better)
Translates to: KRAGYLCRQRAA*KSRCGSAHALP
Trigger: TGGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCCCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp GCACCATGCTTCCCAAGGCATGATCTTGAGCTCATCTaGCCTTCGGTTCGACTGCCCAGCTCAGTAACAGGG +
Preference number: 3 (lower is better)
Translates to: APCFPRHDLELI*PSVRLPSSVTG
Trigger: CCCTGTTACTGAGCTGGGCAGTCGAACCGAAGGGCAGATGAGCTCAAGATCATGCCTTGGGAAGCATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 72 bp TCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTaGGTCTGCTCATGCACTTCCATGGCCAATTGCACC +
Preference number: 3 (lower is better)
Translates to: SMSPAGSMQVQM*VCSCTSMANCT
Trigger: GGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCATGGCCAATTGCACCTaGCTGCTATTCCAAGCTACA +
Preference number: 3 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCMANCT*LLFQAT
Trigger: TGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCAT...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp AGGGAGTCAAGGCCAGCCAGACTTTCAATCCTAAGCTaGACTTCTGGGCAGGAATCACATGGCCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: RESRPARLSILS*TSGQESHGPWQ
Trigger: CTGCCAGGGGCCATGTGATTCCTGCCCAGAAGTTCAGCTTAGGATTGAAAGTCTGGCTGGCCTTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp GGGTCTGCTCATGCACTTCCATGGCCAATTGCACCTTaGTGCTATTCCAAGCTACAGCTCACACGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: GSAHALPWPIAP*CYSKLQLTRGS
Trigger: GCTGCCACGTGTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp GCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATaGACTTCCATGGCCAATTGCACCTTGCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: AGSMQVQMWVCS*TSMANCTLLLF
Trigger: GAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp TCTGCTCATGCACTTCCATGGCCAATTGCACCTTGCTaGTATTCCAAGCTACAGCTCACACGTGGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SAHALPWPIAPC*YSKLQLTRGSL
Trigger: CAGGCTGCCACGTGTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp TTTGCCCAGAAGCACCAAGAGGAAAGAAGGCAATGCTaGTACGTCACAGGTGGAGAGAAGCGCAAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: FAQKHQEERRQC*YVTGGEKRKSP
Trigger: AGGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAGCATTGCCTTCTTTCCTCTTGGTGCTTCTGGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 72 bp CGGAGGTGTTTAAGTCCAGACTGCTCAACCCCTTGGTaGGATGGTTGTAGGCAGAATGTCAGCACCTATGTG +
Preference number: 3 (lower is better)
Translates to: RRCLSPDCSTPW*DGCRQNVSTYV
Trigger: CACATAGGTGCTGACATTCTGCCTACAACCATCCCACCAAGGGGTTGAGCAGTCTGGACTTAAACACCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCACAGAACTGAGACCTTaGGACACTCCGCCGCCCTGC +
Preference number: 3 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFTELRP*DTPPPC
Trigger: GCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTACACAGGCGAAAGCTTaGCTGCAATGGAACATACTG +
Preference number: 3 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSTQAKA*LQWNIL
Trigger: CAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTCAGAAACTTCCTTGTaGGTGCATCAGGATTTCCTC +
Preference number: 3 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSSETSL*VHQDFL
Trigger: GAGGAAATCCTGATGCACCAACAAGGAAGTTTCTGA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTGAGCATCAGATGGAATaGACCTTTGTTGCCCAAACT +
Preference number: 3 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSEHQME*TFVAQT
Trigger: AGTTTGGGCAACAAAGGTCAATTCCATCTGATGCTC...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTCTTGTGCAGAAGCTATaGTCTCTCTCAACTGGGAAA +
Preference number: 3 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSLVQKL*SLSTGK
Trigger: TTTCCCAGTTGAGAGAGACAATAGCTTCTGCACAAG...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp AGTTTTGCCCAGAAGCACCAAGAGGAAAGAAGGCAATaGTGCTACGTCACAGGTGGAGAGAAGCGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: SFAQKHQEERRQ*CYVTGGEKRKS
Trigger: ACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAGCATTGCCTTCTTTCCTCTTGGTGCTTCTGGGCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp CAAACGCTATGCTTTGGGACAGTGCCAGCAATTAGGTaGTTTGCCAAAAATAACTTGTCCCATGTGGCCCCC +
Preference number: 3 (lower is better)
Translates to: QTLCFGTVPAIR*FAKNNLSHVAP
Trigger: GGGGGCCACATGGGACAAGTTATTTTTGGCAAAGCACCTAATTGCTGGCACTGTCCCAAAGCATAGCGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 72 bp CCAAGAGGAAAGAAGGCAATGCTGCTACGTCACAGGTaGAGAGAAGCGCAAGAGTCCTTGATGGATGGTATA +
Preference number: 3 (lower is better)
Translates to: PRGKKAMLLRHR*REAQESLMDGI
Trigger: TATACCATCCATCAAGGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAGCATTGCCTTCTTTCCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp GACTTCTCTGTGATGGTGCTCAGATTAAGTCATCTGTaGAACTCTCTGCCAGGCCAGGCTGTCCATTGTTCT +
Preference number: 3 (lower is better)
Translates to: DFSVMVLRLSHL*NSLPGQAVHCS
Trigger: AGAACAATGGACAGCCTGGCCTGGCAGAGAGTTTCACAGATGACTTAATCTGAGCACCATCACAGAGAAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACTTTGCCAAAAATAACTaGTCCCATGTGGCCCCCATG +
Preference number: 3 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNFAKNN*SHVAPM
Trigger: CATGGGGGCCACATGGGACAAGTTATTTTTGGCAAA...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAATGGCCCCTGGCAGCTaGCATGGTGGTTGTGAACTT +
Preference number: 3 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKMAPGS*HGGCEL
Trigger: AAGTTCACAACCACCATGCAAGCTGCCAGGGGCCAT...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp AAGCATAGTGGGGTGCATAAGGGACCGTATCTTCTGTaGGGGTCTCTATATCAGTGTTTCTGGAACCTCAAC +
Preference number: 3 (lower is better)
Translates to: KHSGVHKGPYLL*GSLYQCFWNLN
Trigger: GTTGAGGTTCCAGAAACACTGATATAGAGACCCTCACAGAAGATACGGTCCCTTATGCACCCCACTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp GTCCTAGCATTGTTTCTTTCCAAAAGGCAAACGCTATaGTTTGGGACAGTGCCAGCAATTAGGTGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: VLALFLSKRQTL*FGTVPAIRCFA
Trigger: GGCAAAGCACCTAATTGCTGGCACTGTCCCAAAGCATAGCGTTTGCCTTTTGGAAAGAAACAATGCTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCTTTCAAATTCCAGTTTaGCCCAGAAGCACCAAGAGG +
Preference number: 3 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFFQIPV*PRSTKR
Trigger: CCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAAA...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATAACAGACTTTCCACCTaGAAAATACGGCACTTCTCT +
Preference number: 3 (lower is better)
Translates to: KGSPGRQISDQEITDQAHNRLST*KIRHFS
Trigger: AGAGAAGTGCCGTATTTTCAAGGTGGAAAGTCTGTT...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCAGAGCTAGGTTGGCCTaGGGAATTTCTGCTCAATTT +
Preference number: 3 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFRARLA*GISAQF
Trigger: AAATTGAGCAGAAATTCCCAAGGCCAACCTAGCTCT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGTCCCAAGGCATGATCTaGAGCTCATCTGCCCTTCGG +
Preference number: 3 (lower is better)
Translates to: CKRRILYNPLSLANVCIKSQGMI*SSSALR
Trigger: CCGAAGGGCAGATGAGCTCAAGATCATGCCTTGGGA...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp CCTTTCCCAACTTTGAGATCCTGTCATTGTAATGACTaGGAGCGCCTTTGGATGACTTCCATGAAGCAACTG +
Preference number: 3 (lower is better)
Translates to: PFPTLRSCHCND*ERLWMTSMKQL
Trigger: CAGTTGCTTCATGGAAGTCATCCAAAGGCGCTCTCAGTCATTACAATGACAGGATCTCAAAGTTGGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp ATGCCATCCACAGCCAGGAGGCATACCAAAATAGGATaGCCTCACAGTCCAGAGTATATTCTATATACAACC +
Preference number: 3 (lower is better)
Translates to: MPSTARRHTKIG*PHSPEYILYTT
Trigger: GGTTGTATATAGAATATACTCTGGACTGTGAGGGCATCCTATTTTGGTATGCCTCCTGGCTGTGGATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CCA 72 bp TTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTaGGTTCTACCTCAAAACACCAGACCCACTTTACCA +
Preference number: 3 (lower is better)
Translates to: FYLKNSSYLALG*VLPQNTRPTLP
Trigger: TGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACACTTCCATGGCCAATaGCACCTTGCTGCTATTCCA +
Preference number: 3 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKHFHGQ*HLAAIP
Trigger: TGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCAGGCCAGGCTGTCCATaGTTCTTATTATTTAAGGCT +
Preference number: 3 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFRPGCP*FLLFKA
Trigger: AGCCTTAAATAATAAGAACAATGGACAGCCTGGCCT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGCTCTCACCTGACCTGTaGAAAGGTCAGATTGAAAAG +
Preference number: 3 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWLSPDL*KGQIEK
Trigger: CTTTTCAATCTGACCTTTCAACAGGTCAGGTGAGAG...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCCAGCAATTAGGTGCTTaGCCAAAAATAACTTGTCCC +
Preference number: 3 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFQQLGA*PKITCP
Trigger: GGGACAAGTTATTTTTGGCAAAGCACCTAATTGCTG...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGTCCCTGAGAGCTAGGTaGGCCTTGGGAATTTCTGCT +
Preference number: 3 (lower is better)
Translates to: CKRRILYNPLSLANVCIKSLRAR*ALGISA
Trigger: AGCAGAAATTCCCAAGGCCAACCTAGCTCTCAGGGA...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp CTAGACATGCATTTTGAACACAGGCGAAAGCTTTGCTaGAATGGAACATACTGCATTTTAGTGAGCGTGGTG +
Preference number: 3 (lower is better)
Translates to: LDMHFEHRRKLC*NGTYCILVSVV
Trigger: CACCACGCTCACTAAAATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGTTCAAAATGCATGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp CTGCTAGACATGCATTTTGAACACAGGCGAAAGCTTTaGTGCAATGGAACATACTGCATTTTAGTGAGCGTG +
Preference number: 3 (lower is better)
Translates to: LLDMHFEHRRKL*CNGTYCILVSV
Trigger: CACGCTCACTAAAATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGTTCAAAATGCATGTCTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTACCATCATATATTCTaGTGCAGAAGCTATTGTCTC +
Preference number: 3 (lower is better)
Translates to: KGSPGRQISDQEITDQAHYHHIF*CRSYCL
Trigger: GAGACAATAGCTTCTGCACAAGAATATATGATGGTA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACGAGTGGTTTAGTGGTTaGATGAAAGAACAGATTTCT +
Preference number: 3 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNEWFSG*MKEQIS
Trigger: AGAAATCTGTTCTTTCATCAAACCACTAAACCACTC...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR GCA 72 bp TTCTTTCCAAAAGGCAAACGCTATGCTTTGGGACAGTaGCAGCAATTAGGTGCTTTGCCAAAAATAACTTGT +
Preference number: 3 (lower is better)
Translates to: FFPKGKRYALGQ*QQLGALPKITC
Trigger: ACAAGTTATTTTTGGCAAAGCACCTAATTGCTGGCACTGTCCCAAAGCATAGCGTTTGCCTTTTGGAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp TGTCATTGGCAAATGTGTGCATTAAGTGAAAGCAACTaGAGGGTTTGTGTTTTAAGATGCAAGCTAGATGAA +
Preference number: 3 (lower is better)
Translates to: CHWQMCALSESN*RVCVLRCKLDE
Trigger: TTCATCTAGCTTGCATCTTAAAACACAAACCCTTCAGTTGCTTTCACTTAATGCACACATTTGCCAATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR TCA 72 bp TATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGTaGAAGCAACTGAAGGGTTTGTGTTTTAAGATGCAA +
Preference number: 3 (lower is better)
Translates to: YNPLSLANVCIK*KQLKGLCFKMQ
Trigger: TTGCATCTTAAAACACAAACCCTTCAGTTGCTTTCACTTAATGCACACATTTGCCAATGACAGAGGGTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGTGTCCTCCTCCGTGCTaGAGCCGTTCATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGCPPPC*SRSSPR
Trigger: GCGGGGAGATGAACGGCTTCAGCACGGAGGAGGACA...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCTGGACCCTCTTGCTaGAGGAGGCGTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCSGPSC*RRRCPR
Trigger: CCGCGGGCAACGCCTCCTTCAGCAAGAGGGTCCAGA...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCAAGGACTCCGGGCCTaGGTTGCCAGGGGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGQGLRA*VARGFR
Trigger: TCGAAACCCCCTGGCAACCCAGGCCCGGAGTCCTTG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCGCCAGCGGGCAGCATaGAAGTCCAGATGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGRQRAA*KSRCGS
Trigger: AGACCCACATCTGGACTTGCATGCTGCCCGCTGGCG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTACTCCGGGCCTGGGTTaGCAGGGGGTTTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSTPGLG*QGVSKA
Trigger: GGCCTTCGAAACCCCCTGGCAACCCAGGCCCGGAGT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGGGAATGTCAGTGTCGTaGTCGGGAGAATCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGGMSVS*SGESPP
Trigger: TGGCGGAGATTCTCCCGAGCACGACACTGACATTCC...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATCTGCAGCCACTCGGCTaGGCCCCGAGTCCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLQPLG*APSPAA
Trigger: TGCCGCGGGACTCGGGGCGCAGCCGAGTGGCTGCAG...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATGGCCCACTCCACCCCTaGAGCCACTCGGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHGPLHP*SHSAAP
Trigger: GGGCGCAGCCGAGTGGCTGCAGGGGTGGAGTGGGCC...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCGTAGGGTGTTCACCTaGAGCTGGAACAGATCAACC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGRRVFT*SWNRST
Trigger: GGTTGATCTGTTCCAGCTGCAGGTGAACACCCTACG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATGCTCGCCGTCCTCGATaGGGCAGCAGCTCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINARRPR*GSSSGR
Trigger: ACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGC...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCGGGCAAGCACAGAACTaGGTCCTCATCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSGQAQN*VLICLR
Trigger: CCTCAGACAGATGAGGACTCAGTTCTGTGCTTGCCC...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGCATTTCGCTCAATCTTaGGTTCTGCAGGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGHFAQS*VLQVGP
Trigger: GGGACCAACCTGCAGAACTCAAGATTGAGCGAAATG...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTGTCGATGTCCAGCTTaGGTTTCTTCTGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCCRCPA*VSSARC
Trigger: GCATCTCGCAGAAGAAACTCAAGCTGGACATCGACA...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCCTGCACCCCAAAGAGTaGAGCATAGTGGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSLHPKE*SIVGCI
Trigger: TATGCACCCCACTATGCTTCACTCTTTGGGGTGCAG...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCATACCAGGCTGGAACTaGGGCAGGAACCATACTCTT +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCIPGWN*GRNHTL
Trigger: AAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTAT...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGAATACGGCACTTCTCTaGCGCTTAGACCTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGNTALL*RLDLKS
Trigger: GGACTTAAGGTCTAAGCGTCAGAGAAGTGCCGTATT...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCTGGCCCCTGGCAGCTTaGATGGTGGTTGTGAACTTA +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSWPLAA*MVVVNL
Trigger: TAAGTTCACAACCACCATGCAAGCTGCCAGGGGCCA...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCAGCCAAGATGAACATTaGTTTCCCCACACCCCACTG +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCSQDEH*FPHTPL
Trigger: CAGTGGGGTGTGGGGAAAGCAATGTTCATCTTGGCT...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTGGGCAGGAATCACATaGCCCCTGGCAGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSWAGIT*PLAACM
Trigger: CATGCAAGCTGCCAGGGGCCATGTGATTCCTGCCCA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp GAAAGCGTGGTACTCTGCTCCACAGAACTGAGACCTTaGGACACTCCGCCGCCCTGCTCAGTAGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: ESVVLCSTELRP*DTPPPCSVGGL
Trigger: TAAACCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAGAGTACCACGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGAGCATCAGATGGAATTaGCCTTTGTTGCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGSIRWN*PLLPKL
Trigger: GAGTTTGGGCAACAAAGGTCAATTCCATCTGATGCT...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTGGCCAATTGCACCTTaGTGCTATTCCAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCWPIAP*CYSKLQ
Trigger: CTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCA...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTGTCCAGATGTGGGTCTaGTCATGCACTTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSVQMWV*SCTSMA
Trigger: GGCCATGGAAGTGCATGAGCAGACCCACATCTGGAC...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACCAGACCCCGTTGCTCTaGAGGGCCTGGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHQTPLL*RAWPLL
Trigger: GAGAAGTGGCCAGGCCCTCCAGAGCAACGGGGTCTG...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCGGACCGTATCTTCTGTaGGGGTCTCTATATCAGTGT +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSGPYLL*GSLYQC
Trigger: ACACTGATATAGAGACCCTCACAGAAGATACGGTCC...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGAAAGAAATAGTGATGTaGCCTACACGCCCACAATTC +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGKEIVM*PTRPQF
Trigger: GAATTGTGGGCGTGTAGGTCACATCACTATTTCTTT...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACGGTTTCGAAGGCCCCTaGCGGCTCCCGCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNGFEGP*RLPPSF
Trigger: GAAAGAAGGCGGGAGCCGGCAGGGGCCTTCGAAACC...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGTTCAAATTCCAGTTTTaGCCAGAAGCACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGFKFQF*PEAPRG
Trigger: TCCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAA...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp TGGGTCTGCTCATGCACTTCCATGGCCAATTGCACCTaGCTGCTATTCCAAGCTACAGCTCACACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WVCSCTSMANCT*LLFQATAHTWQ
Trigger: CTGCCACGTGTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGAGCAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGCACCCCACTGCTCCCTaGAGCCAGACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWHPTAP*SQTPLL
Trigger: GAGCAACGGGGTCTGGCTTCAGGGAGCAGTGGGGTG...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACGACACTCCGCCGCCCTaGTCAGTAGGGGGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNDTPPP*SVGGLV
Trigger: GACTAAACCCCCTACTGAGCAGGGCGGCGGAGTGTC...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACACAGAGCACTGGACATaGCATCCACAGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHTEHWT*HPQPGG
Trigger: GCCTCCTGGCTGTGGATGGCATGTCCAGTGCTCTGT...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCAACAGGCAGTTGCCCTaGAGGATATTAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCNRQLP*RILTKS
Trigger: GCTTTTTGTTAATATCCTGCAGGGCAACTGCCTGTT...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTACCCCTAGAGCACCATaGTTCCCAAGGCATGATCTT +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSTPRAP*FPRHDL
Trigger: AAGATCATGCCTTGGGAAGCATGGTGCTCTAGGGGT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTATGCAAGTCCAGATGTaGGTCTGCTCATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSMQVQM*VCSCTS
Trigger: GGAAGTGCATGAGCAGACCCACATCTGGACTTGCAT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGATGATCCCCCAGATTTaGCAGGAAACAAGTACAATA +
Preference number: 4 (lower is better)
Translates to: LLHRTETFGHSAALLSRGMIPQI*QETSTI
Trigger: TATTGTACTTGTTTCCTGCCAAATCTGGGGGATCAT...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATTCTGCTCCACAGAACTaGGACCTTTGGACACTCCGC +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINSAPQN*DLWTLR
Trigger: GCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAGA...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACCCGGAGGAGCCTTCTaGCGGGGGCCCAGAACCGTA +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKPGGAF*RGPRTV
Trigger: TACGGTTCTGGGCCCCCGGCAGAAGGCTCCTCCGGG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTCTACCCCATACCCTCTaGCCTCCATTACACAGATTA +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSLPHTL*PPLHRL
Trigger: TAATCTGTGTAATGGAGGGCAGAGGGTATGGGGTAG...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATCAGGCAGGAGTCCCTTaGCCACAGATAGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHQAGVP*PQIEPP
Trigger: TGGTGGCTCTATCTGTGGGCAAGGGACTCCTGCCTG...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCTTGCTCTGGAGGGCCTaGCCACTTCTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFLLWRA*PLLTGR
Trigger: CCTGCCTGTGAGAAGTGGCCAGGCCCTCCAGAGCAA...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATAACAATGCCTTAACCTaGAGGCCCCATCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHNNALT*RPHLPL
Trigger: GAGGGGCAGATGGGGCCTGCAGGTTAAGGCATTGTT...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGTTCCCCACACCCCACTaGTCCCTGAAGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGFPTPH*SLKPDP
Trigger: GGGGTCTGGCTTCAGGGAGCAGTGGGGTGTGGGGAA...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTACAGTTTCTGCTAACTaGGCCTTATTGAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSTVSAN*ALLKPG
Trigger: ACCAGGCTTCAATAAGGCCCAGTTAGCAGAAACTGT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGGAATCACATGGCCCCTaGCAGCTTGCATGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTESHGP*QLAWWL
Trigger: CAACCACCATGCAAGCTGCCAGGGGCCATGTGATTC...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACACACTCACAGAGCACTaGACATGCCATCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHTLTEH*TCHPQP
Trigger: TGGCTGTGGATGGCATGTCCAGTGCTCTGTGAGTGT...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCATATGGACATTTCCATaGAGCAAGTTAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCIWTFP*SKLTMP
Trigger: AGGCATTGTTAACTTGCTCCATGGAAATGTCCATAT...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGATAACTTGTCCCATGTaGCCCCCATGGGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTITCPM*PPWGRD
Trigger: GTCTCTGCCCCATGGGGGCCACATGGGACAAGTTAT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCCTCTCCCCAAGCTTTaGCAGAAACAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTPLPKL*QKQASQ
Trigger: CTGGCTGGCTTGTTTCTGCCAAAGCTTGGGGAGAGG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp CAGATGGAATTGACCTTTGTTGCCCAAACTCATGATTaGCTGATGACCAGAGCCCAGGGAGTCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QMELTFVAQTHD*LMTRAQGVKAS
Trigger: GCTGGCCTTGACTCCCTGGGCTCTGGTCATCAGCAAATCATGAGTTTGGGCAACAAAGGTCAATTCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp CGCTATGCTTTGGGACAGTGCCAGCAATTAGGTGCTTaGCCAAAAATAACTTGTCCCATGTGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RYALGQCQQLGA*PKITCPMWPPW
Trigger: CCATGGGGGCCACATGGGACAAGTTATTTTTGGCAAAGCACCTAATTGCTGGCACTGTCCCAAAGCATAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGGTACAAGGCACAGGGTaGGTGAGGGGGACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGVQGTG*VRGTSV
Trigger: GACACTGGTCCCCCTCACTCACCCTGTGCCTTGTAC...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTTTAGCCAATACCTACTaGTTGAGTGCCTACTGTGTA +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSLANTY*LSAYCV
Trigger: TACACAGTAGGCACTCAATCAGTAGGTATTGGCTAA...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGGCCCCTCAGCCTTCTTaGTGCCTGTATCAACATCCT +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTAPQPS*CLYQHP
Trigger: AGGATGTTGATACAGGCATCAAGAAGGCTGAGGGGC...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCTGCAGGTTGGTCCCTaGGAGCTAGGTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGLQVGP*ELGWPW
Trigger: CCAAGGCCAACCTAGCTCTCAGGGACCAACCTGCAG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATGTTTCTTCTGCGAGATaGTCTTCTGGACCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINVSSAR*SSGPSC
Trigger: GCAAGAGGGTCCAGAAGAGCATCTCGCAGAAGAAAC...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCTCACTCAAGCTGCTTaGCACCCTCCGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNLTQAA*HPPISG
Trigger: ACCAGAAATCGGAGGGTGGCAAGCAGCTTGAGTGAG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTAAACTTCCTTGTTGGTaGATCAGGATTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSKLPCW*IRISST
Trigger: TGTGGAGGAAATCCTGATGCACCAACAAGGAAGTTT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCGATCTTGAGCTCATCTaGCCTTCGGTTCGACTGCCC +
Preference number: 4 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFDLELI*PSVRLP
Trigger: GGGCAGTCGAACCGAAGGGCAGATGAGCTCAAGATC...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATGAGCATCCGTTTTTGTaGGGCAAGCACAGAACTGAG +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINEHPFL*GKHRTE
Trigger: CTCAGTTCTGTGCTTGCCCCACAAAAACGGATGCTC...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATAGATTAAGTCATCTGTaGAACTCTCTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINRLSHL*NSLPGQ
Trigger: CTGGCCTGGCAGAGAGTTTCACAGATGACTTAATCT...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCCATCATATATTCTTGTaGAGAAGCTATTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSHHIFL*RSYCLS
Trigger: AGAGAGACAATAGCTTCTGCACAAGAATATATGATG...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCTCAATCTTGAGTTCTaGAGGTTGGTCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNLNLEF*RLVPES
Trigger: GCTCTCAGGGACCAACCTGCAGAACTCAAGATTGAG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGGTGTTCACCTGCAGCTaGAACAGATCAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTVFTCS*NRSTSG
Trigger: TCCTGAGGTTGATCTGTTCCAGCTGCAGGTGAACAC...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCTTACTCATTAAGATATaGACATTTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSLLIKI*TFPWSK
Trigger: CTTGCTCCATGGAAATGTCCATATCTTAATGAGTAA...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACTGTCATTGTAATGACTaGGAGCGCCTTTGGATGACT +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHCHCND*ERLWMT
Trigger: AGTCATCCAAAGGCGCTCTCAGTCATTACAATGACA...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATGAAACAAGTACAATATaGGGAGGCCTGGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINETSTI*GGLEWK
Trigger: CTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTC...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCCAATTGCACCTTGCTaGTATTCCAAGCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNPIAPC*YSKLQL
Trigger: GAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACTACCTACTGATTGAGTaGCTACTGTGTACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHYLLIE*LLCTRH
Trigger: GTGCCTTGTACACAGTAGGCACTCAATCAGTAGGTA...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATCACAGGCGAAAGCTTTaGTGCAATGGAACATACTGC +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHHRRKL*CNGTYC
Trigger: GCAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTG...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATCAGAAACTTCCTTGTTaGTGCATCAGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINQKLPC*CIRISS
Trigger: GGAGGAAATCCTGATGCACCAACAAGGAAGTTTCTG...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCTGCTACGTCACAGGTaGAGAGAAGCGCAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGLLRHR*REAQES
Trigger: GGACTCTTGCGCTTCTCTCCACCTGTGACGTAGCAG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTATCTTGCCCTAGGCTaGGTTCTACCTCAAAACACC +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHYLALG*VLPQNT
Trigger: GGTGTTTTGAGGTAGAACCCAGCCTAGGGCAAGATA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCCAATACCTACTGATTaGGTGCCTACTGTGTACAAG +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTPIPTD*VPTVYK
Trigger: CTTGTACACAGTAGGCACTCAATCAGTAGGTATTGG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCATCCTCACTCAAGCTaGTTGCCACCCTCCGATTTC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGHPHSS*LPPSDF
Trigger: GAAATCGGAGGGTGGCAAGCAGCTTGAGTGAGGATG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATTGCAATGGAACATACTaGATTTTAGTGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINCNGTY*ILVSVV
Trigger: CACCACGCTCACTAAAATGCAGTATGTTCCATTGCA...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATAAAAGGTTGAAAAGATaGCCACAACCTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINKRLKR*PQPPLS
Trigger: GGAAAGTGGAGGTTGTGGGCATCTTTTCAACCTTTT...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTATGCTTTGGGACAGTaGCAGCAATTAGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHYALGQ*QQLGAL
Trigger: CAAAGCACCTAATTGCTGGCACTGTCCCAAAGCATA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGATGAAGCAACTGCTCTaGGCAACAGCCTCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWMKQLL*ATASLN
Trigger: ATTGAGGGAGGCTGTTGCCCAGAGCAGTTGCTTCAT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGTTGAGTTCTGCAGGTTaGTCCCTGAGAGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWLSSAG*SLRARL
Trigger: CAACCTAGCTCTCAGGGACCAACCTGCAGAACTCAA...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACTAACTGGGCCTTATTaGAGCCTGGTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKLTGPY*SLVWSA
Trigger: TGCAGACCAGACCAGGCTTCAATAAGGCCCAGTTAG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACACACATGCTGAATCATaGGAATATAATCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SCTSMANCTLLLFQATAHTHAES*EYNPPD
Trigger: GTCAGGAGGATTATATTCTCATGATTCAGCATGTGT...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAATGGAGCAGCCAAGATaGACATTGCTTTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHIMEQPR*TLLSPH
Trigger: GTGTGGGGAAAGCAATGTTCATCTTGGCTGCTCCAT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTTAGACCTTAAGTCCTaGAGCGTTGTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLDLKS*SVVFSA
Trigger: TGCTGAGAAAACAACGCTTCAGGACTTAAGGTCTAA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGATAAATGACAAAGCTTaGAACAAAGCGGGCGGGATA +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTINDKA*NKAGGI
Trigger: TATCCCGCCCGCTTTGTTGCAAGCTTTGTCATTTAT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCATACCAAAATAGGATaGCCTCACAGTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTHTKIG*PHSPEY
Trigger: ATACTCTGGACTGTGAGGGCATCCTATTTTGGTATG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCTAAGGTACAAGCCCTaGGCAACCATGAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTLRYKP*ATMKTL
Trigger: TAAAGTTTTCATGGTTGCCCAGGGCTTGTACCTTAG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGCAATATGAGGAGGCCTaGAATGGAAGGGCACTTACT +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWQYEEA*NGRALT
Trigger: AGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTG...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp GAAGACAACGCCAGTTCTGGATTTCAAATTCCAGTTTaGCCCAGAAGCACCAAGAGGAAAGAAGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: EDNASSGFQIPV*PRSTKRKEGNA
Trigger: AGCATTGCCTTCTTTCCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAAATCCAGAACTGGCGTTGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGTTACTATCTGTTCTCTaGAAGGCTAGCAGTGACTAT +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTLLSVL*KASSDY
Trigger: ATAGTCACTGCTAGCCTTTCAGAGAACAGATAGTAA...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGAAAGCGTGGTACTCTaGTCCACAGAACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKESVVL*STELRP
Trigger: AGGTCTCAGTTCTGTGGAGCAGAGTACCACGCTTTC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCGAGCTAGGTTGGCCTTaGGAATTTCTGCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFELGWP*EFLLNF
Trigger: AAAATTGAGCAGAAATTCCCAAGGCCAACCTAGCTC...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCTTTCAATCCTAAGCTaGACTTCTGGGCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGLSILS*TSGQES
Trigger: TGATTCCTGCCCAGAAGTTCAGCTTAGGATTGAAAG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAATTTCCTGATGATGTaGGCATCCGTTTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHINFLMM*ASVFVG
Trigger: CCCCACAAAAACGGATGCTCACATCATCAGGAAATT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACAGTAGATATCACCTGTaGATCAAGCATTACACTTCA +
Preference number: 4 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNSRYHL*IKHYTS
Trigger: TGAAGTGTAATGCTTGATGCACAGGTGATATCTACT...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGATGTGGGTCTGCTCATaGACTTCCATGGCCAATTGC +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKMWVCS*TSMANC
Trigger: GCAATTGGCCATGGAAGTGCATGAGCAGACCCACAT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGATCTGTGAAACTCTCTaGCAGGCCAGGCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKICETL*QARLSI
Trigger: AATGGACAGCCTGGCCTGGCAGAGAGTTTCACAGAT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGTTTGCAAAACTCAACTaGCCTAAACATTTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTFAKLN*PKHFAQ
Trigger: TTGAGCGAAATGTTTAGGCCAGTTGAGTTTTGCAAA...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGATAACCCTCTGTCATTaGCAAATGTGTGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTITLCH*QMCALS
Trigger: ACTTAATGCACACATTTGCCAATGACAGAGGGTTAT...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAATCACAGGTATGTTCCTaGAGTGTCGACTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKSQVCS*SVDSQF
Trigger: AAACTGTGAGTCGACACTTCAGGAACATACCTGTGA...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAATCTTCACCATGTAGATaGAGTAGGCAAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKSSPCR*SRQGSL
Trigger: AAGAGACCCTTGCCTACTTCATCTACATGGTGAAGA...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGTCTTTTCTCTCACCTaGCCTGTTGAAAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKVFSLT*PVERSD
Trigger: ATCTGACCTTTCAACAGGTCAGGTGAGAGAAAAGAC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAGGCGAAAGCTTTGCTaGAATGGAACATACTGCATT +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHIRRKLC*NGTYCI
Trigger: AATGCAGTATGTTCCATTGCAGCAAAGCTTTCGCCT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGGAACAGTTCATATCTTaGCCTAGGCTGGGTTCTACC +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKEQFIS*PRLGST
Trigger: GGTAGAACCCAGCCTAGGGCAAGATATGAACTGTTC...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGAGAGTCCTTGATGGATaGTATAAAAATGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGRVLDG*YKNGAA
Trigger: GGCTGCTCCATTTTTATACCATCCATCAAGGACTCT...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGTGAATGTGAATGACTaGAAACACTCACAGAGCACT +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKVNVND*KHSQST
Trigger: AGTGCTCTGTGAGTGTTTTCAGTCATTCACATTCAC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGCATAGTGAATGTGAATaGCTGAAAACACTCACAGAG +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGHSECE*LKTLTE
Trigger: CTCTGTGAGTGTTTTCAGTCATTCACATTCACTATG...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGGCCCTTTCCCAACTTTaGGATCCTGTCATTGTAATG +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKALSQL*DPVIVM
Trigger: CATTACAATGACAGGATCTCAAAGTTGGGAAAGGGC...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGACAGACTTTCCACCTTaGAAATACGGCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKTDFPP*KYGTSL
Trigger: CAGAGAAGTGCCGTATTTTCAAGGTGGAAAGTCTGT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAATGTGTGCATTAAGTaGAAGCAACTGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHINVCIK*KQLKGL
Trigger: CAAACCCTTCAGTTGCTTTCACTTAATGCACACATT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAAGTTAAAATACAAATaGTCCCCCAGATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHIKLKYK*SPRFGR
Trigger: CCTGCCAAATCTGGGGGATCATTTGTATTTTAACTT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGGGCCATCCCATCGTGTaGTATTGCAACATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKGHPIV*YCNMKS
Trigger: ACTTTTCATGTTGCAATATCACACGATGGGATGGCC...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGATGCAACACTGCAGCTaGAAACAATTGTTACTATCT +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWMQHCS*KQLLLS
Trigger: AGATAGTAACAATTGTTTGCAGCTGCAGTGTTGCAT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAACACCAAAATTAGATaGAACACTGCAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: CLYQHPSAVSRERISKHINTKIR*NTAAAN
Trigger: GTTTGCAGCTGCAGTGTTGCATCTAATTTTGGTGTT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR TCA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGTTCGGACACTCTGGATaGAATTTTTGTGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: WILPSYILVQKLLSLSTGFGHSG*NFCENH
Trigger: GTGATTTTCACAAAAATTTCATCCAGAGTGTCCGAA...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGATGTCAGTGTGTCAATaGATTTATTACCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWMSVCQ*IYYQEA
Trigger: AGCTTCTTGGTAATAAATGCATTGACACACTGACAT...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGTGCCAGCAATTAGGTaGTTTGCCAAAAATAACTTG +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKVPAIR*FAKNNL
Trigger: CAAGTTATTTTTGGCAAAGCACCTAATTGCTGGCAC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACCCCAGGTTTCGCTTTaGAATAAAGATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKPQVSL*NKDSFR
Trigger: TCTGAAAGAATCTTTATTCCAAAGCGAAACCTGGGG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR GCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGGTCATAATATCTAACTaGACCCCAAAGAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKVIISN*TPKSEA
Trigger: TGCTTCACTCTTTGGGGTGCAGTTAGATATTATGAC...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp TATGTCAGTGTGTCAATGCATTTATTACCAAGAAGCTaGGCTGAAGTCATAATATCTAACTGCACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YVSVSMHLLPRS*AEVIISNCTPK
Trigger: CTTTGGGGTGCAGTTAGATATTATGACTTCAGCCAAGCTTCTTGGTAATAAATGCATTGACACACTGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp AGGCAAATTGTTCACAAAAATGAGCATCAGATGGAATaGACCTTTGTTGCCCAAACTCATGATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RQIVHKNEHQME*TFVAQTHDLLM
Trigger: CATCAGCAAATCATGAGTTTGGGCAACAAAGGTCAATTCCATCTGATGCTCATTTTTGTGAACAATTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CCA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGAAAGCTTTGCTGCAATaGAACATACTGCATTTTAGT +
Preference number: 4 (lower is better)
Translates to: CKRRILYNPLSLANVCIKKALLQ*NILHFS
Trigger: ACTAAAATGCAGTATGTTCCATTGCAGCAAAGCTTT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
3UTR CAA 72 bp AACTCAGAATTGAAACTGAGTAGGAAAATGACACCTTaGACCATATGTCAAGATGGTCATAAATTAGAATCC +
Preference number: 4 (lower is better)
Translates to: NSELKLSRKMTP*TICQDGHKLES
Trigger: GGATTCTAATTTATGACCATCTTGACATATGGTCAAAGGTGTCATTTTCCTACTCAGTTTCAATTCTGAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS TCA 90 bp AGGAGGCGTTGCCCGCGGGCCGGACGCAGCGCTCGCCGTCCTCGATaGGGCAGCAGCTCTGGCCGTAGCCCGGGGCGGCGGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRRCPRAGRSARRPR*GSSSGRSPGRRQLG
Trigger: CCCCAGCTGCCGCCGCCCCGGGCTACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCCGCGGGCAACGCCTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297109.11
ENST00000426761.2
ENST00000440364.6
ENST00000519683.1
ENST00000520159.1
ENST00000523198.5
CDS-3UTR CAA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCCTCTTCTGGACCCTCTaGCTGAAGGAGGCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCLFWTL*LKEALP
Trigger: GGGCAACGCCTCCTTCAGCAAGAGGGTCCAGAAGAG...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGTCCTCTCCCCAAGCTTaGGCAGAAACAAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LLHRTETFGHSAALLSRGSSPQA*AETSQP
Trigger: TGGCTGGCTTGTTTCTGCCAAAGCTTGGGGAGAGGA...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCCCAAGGCATGATCTaGAGCTCATCTGCCCTTCGG +
Preference number: 5 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCSQGMI*SSSALR
Trigger: CCGAAGGGCAGATGAGCTCAAGATCATGCCTTGGGA...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTGTGAGCATCCGTTTTaGTGGGGCAAGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCCEHPF*WGKHRT
Trigger: AGTTCTGTGCTTGCCCCACAAAAACGGATGCTCACA...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTAGGTGCCTTACGCTCTaGTCGATGTCCAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSRCLTL*SMSSLS
Trigger: ACTCAAGCTGGACATCGACAAGAGCGTAAGGCACCT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTGGAGACCCCACAGAATaGAGAGCCTTTCAACAGTAC +
Preference number: 5 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSGDPTE*RAFQQY
Trigger: GTACTGTTGAAAGGCTCTCAATTCTGTGGGGTCTCC...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp CTGCTCCACAGAACTGAGACCTTTGGACACTCCGCCGCCCTGCTCAGTAGGGGGTCCCATCGTGTGATATaGCAACATGAAAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: LLHRTETFGHSAALLSRGSHRVI*QHEKSH
Trigger: ATGTGACTTTTCATGTTGCAATATCACACGATGGGA...CCCCCTACTGAGCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGTGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAGACTCCGGGCCTGGGTaGCCAGGGGGTTTCGAAGGC +
Preference number: 5 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKDSGPG*PGGFEG
Trigger: GCCTTCGAAACCCCCTGGCAACCCAGGCCCGGAGTC...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGTTGCTGAAGGAGGCGTaGCCCGCGGGCCGGACGCAG +
Preference number: 5 (lower is better)
Translates to: CKRRILYNPLSLANVCIKLLKEA*PAGRTQ
Trigger: CTGCGTCCGGCCCGCGGGCAACGCCTCCTTCAGCAA...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GGCGGGATATCTATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCGGAACATCTAAAAACTaGGCAGCTGTAACATGTAAG +
Preference number: 5 (lower is better)
Translates to: GGISMSPAGSMQVQMWVCGTSKN*AAVTCK
Trigger: CTTACATGTTACAGCTGCCAAGTTTTTAGATGTTCC...GCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACATAGATATCCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCAATGATCCCCCAGATTaGGCAGGAAACAAGTACAAT +
Preference number: 5 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSNDPPD*AGNKYN
Trigger: ATTGTACTTGTTTCCTGCCAAATCTGGGGGATCATT...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS GCA 90 bp CCGCAACTGGTTTCTTTGACCTTTACCTCAGGAATGTCAGTGTCGTaGTCGGGAGAATCTCCGCCATCGTCACTTGTCTTCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PQLVSLTFTSGMSVS*SGESPPSSLVFLFL
Trigger: AAGGAAGAGGAAGACAAGTGACGATGGCGGAGATTCTCCCGAGCACGACACTGACATTCCTGAGGTAAAGGTCAAAGAAACCAGTTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519683.1
CDS-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACGCTAACTGGGCCTTATaGAAGCCTGGTCTGGTCTGC +
Preference number: 5 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNANWAL*KPGLVC
Trigger: GCAGACCAGACCAGGCTTCAATAAGGCCCAGTTAGC...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACATGGCCCCTGGCAGCTaGCATGGTGGTTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNMAPGS*HGGCEL
Trigger: AAGTTCACAACCACCATGCAAGCTGCCAGGGGCCAT...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ATGTCGCCAGCGGGCAGCATGCAAGTCCAGATGTGGGTCTGCTCATGCACTTCCAGGAAAATGACACCTTaGACCATATGTCAAGATGGT +
Preference number: 5 (lower is better)
Translates to: MSPAGSMQVQMWVCSCTSRKMTP*TICQDG
Trigger: ACCATCTTGACATATGGTCAAAGGTGTCATTTTCCT...GGAAGTGCATGAGCAGACCCACATCTGGACTTGCATGCTGCCCGCTGGCGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATTGCCCCTCAGCCTTCTaGATGCCTGTATCAACATCC +
Preference number: 5 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINCPSAF*MPVSTS
Trigger: GGATGTTGATACAGGCATCAAGAAGGCTGAGGGGCA...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGCCTCACTCAAGCTGCTaGCCACCCTCCGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWPHSSC*PPSDFW
Trigger: CCAGAAATCGGAGGGTGGCAAGCAGCTTGAGTGAGG...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACAGCCTCCCTCAATAGGCAAGGCCCCCAGAGTAAGCTCCTTCTTCCATCCTCTAGGCCAGGCTGTCCATaGTTCTTATTATTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: TASLNRQGPQSKLLLPSSRPGCP*FLLFKA
Trigger: AGCCTTAAATAATAAGAACAATGGACAGCCTGGCCT...AGAGGATGGAAGAAGGAGCTTACTCTGGGGGCCTTGCCTATTGAGGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGACAGAACTGAGACCTTaGGACACTCCGCCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: WILPSYILVQKLLSLSTGTELRP*DTPPPC
Trigger: GCAGGGCGGCGGAGTGTCCAAAGGTCTCAGTTCTGT...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS TCA 90 bp ACAGATCAACCTAGGGAGAAGAGGAGAAAAATGTTATCCATCACCTaGCCACCCAGGACTCACCAAGAGCCCACTATGTGCCTAGCACTA +
Preference number: 5 (lower is better)
Translates to: TDQPREKRRKMLSIT*PPRTHQEPTMCLAL
Trigger: TAGTGCTAGGCACATAGTGGGCTCTTGGTGAGTCCTGGGTGGTCAGGTGATGGATAACATTTTTCTCCTCTTCTCCCTAGGTTGATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517926.1
CDS-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACCACTTCCATGGCCAATaGCACCTTGCTGCTATTCCA +
Preference number: 5 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNHFHGQ*HLAAIP
Trigger: TGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTG...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACTTTGCCAAAAATAACTaGTCCCATGTGGCCCCCATG +
Preference number: 5 (lower is better)
Translates to: SCTSMANCTLLLFQATAHFAKNN*SHVAPM
Trigger: CATGGGGGCCACATGGGACAAGTTATTTTTGGCAAA...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATTTGTCGATGTCCAGCTaGAGTTTCTTCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: KGSPGRQISDQEITDQAHLSMSS*SFFCEM
Trigger: CATCTCGCAGAAGAAACTCAAGCTGGACATCGACAA...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGCTCCGCCATCGTCACTaGTCTTCCTCTTCCTTTTAT +
Preference number: 5 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTLRHRH*SSSSFY
Trigger: ATAAAAGGAAGAGGAAGACAAGTGACGATGGCGGAG...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TCATGCACTTCCATGGCCAATTGCACCTTGCTGCTATTCCAAGCTACAGCTCACTCAGAAACTTCCTTGTaGGTGCATCAGGATTTCCTC +
Preference number: 5 (lower is better)
Translates to: SCTSMANCTLLLFQATAHSETSL*VHQDFL
Trigger: GAGGAAATCCTGATGCACCAACAAGGAAGTTTCTGA...GTGAGCTGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCATGGAAGTGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACAAGGCACAGGGTGAGTGAGGGGGACCAGTGTCAAACTGATCTGCTGATAAATTTTCAAATTCCAGTTTaGCCCAGAAGCACCAAGAGG +
Preference number: 5 (lower is better)
Translates to: TRHRVSEGDQCQTDLLINFQIPV*PRSTKR
Trigger: CCTCTTGGTGCTTCTGGGCAAAACTGGAATTTGAAA...ATTTATCAGCAGATCAGTTTGACACTGGTCCCCCTCACTCACCCTGTGCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAGCCCAAACTCATGATTaGCTGATGACCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: CLYQHPSAVSRERISKHIAQTHD*LMTRAQ
Trigger: CTGGGCTCTGGTCATCAGCAAATCATGAGTTTGGGC...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GAACCATACCAGGCTGGAACTGAGGCAGGAACCATACTCTTTAAGAAGACAACGGAGCATCAGATGGAATaGACCTTTGTTGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: EPYQAGTEAGTILFKKTTEHQME*TFVAQT
Trigger: AGTTTGGGCAACAAAGGTCAATTCCATCTGATGCTC...CGTTGTCTTCTTAAAGAGTATGGTTCCTGCCTCAGTTCCAGCCTGGTATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATATCCCTGAGAGCTAGGTaGGCCTTGGGAATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CLYQHPSAVSRERISKHISLRAR*ALGISA
Trigger: AGCAGAAATTCCCAAGGCCAACCTAGCTCTCAGGGA...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCACATTTCGCTCAATCTaGAGTTCTGCAGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFTFRSI*SSAGWS
Trigger: GGACCAACCTGCAGAACTCAAGATTGAGCGAAATGT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCCTCTCACCTGACCTGTaGAAAGGTCAGATTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFLSPDL*KGQIEK
Trigger: CTTTTCAATCTGACCTTTCAACAGGTCAGGTGAGAG...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp AAAGGATCGCCTGGAAGGCAGATATCTGACCAAGAGATCACAGACCAAGCACATGAAGCGCAAGAGTCCTaGATGGATGGTATAAAAATG +
Preference number: 5 (lower is better)
Translates to: KGSPGRQISDQEITDQAHEAQES*MDGIKM
Trigger: CATTTTTATACCATCCATCAAGGACTCTTGCGCTTC...ATGTGCTTGGTCTGTGATCTCTTGGTCAGATATCTGCCTTCCAGGCGATCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCAGCCCTTTCCCAACTTaGAGATCCTGTCATTGTAAT +
Preference number: 5 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFSPFPT*RSCHCN
Trigger: ATTACAATGACAGGATCTCAAAGTTGGGAAAGGGCT...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp ACTGACTGTAGACATTTCTACCTCAAGAACAGTTCATATCTTGCCCTAGGCTGGCCCTTACCACTCATTTaGCAAAACTCAACTGGCCTA +
Preference number: 5 (lower is better)
Translates to: TDCRHFYLKNSSYLALGWPLPLI*QNSTGL
Trigger: TAGGCCAGTTGAGTTTTGCAAAATGAGTGGTAAGGG...CCAGCCTAGGGCAAGATATGAACTGTTCTTGAGGTAGAAATGTCTACAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCCTAGGCTGGGTTCTACCTCAAAACACCAGACCCACTTTACCATTTCTAACTATAACCCTCTGTCATaGGCAAATGTGTGCATTAAG +
Preference number: 5 (lower is better)
Translates to: CPRLGSTSKHQTHFTISNYNPLS*ANVCIK
Trigger: CTTAATGCACACATTTGCCAATGACAGAGGGTTATA...GTTAGAAATGGTAAAGTGGGTCTGGTGTTTTGAGGTAGAACCCAGCCTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAAATGGCCAATTGCACCTaGCTGCTATTCCAAGCTACA +
Preference number: 5 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKMANCT*LLFQAT
Trigger: TGTAGCTTGGAATAGCAGCAAGGTGCAATTGGCCAT...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGAGAGCTAGGTTGGCCTaGGGAATTTCTGCTCAATTT +
Preference number: 5 (lower is better)
Translates to: WILPSYILVQKLLSLSTGRARLA*GISAQF
Trigger: AAATTGAGCAGAAATTCCCAAGGCCAACCTAGCTCT...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGTAAAAGAAGGATCCTGTATAACCCTCTGTCATTGGCAAATGTGTGCATTAAGACACAGGCGAAAGCTTaGCTGCAATGGAACATACTG +
Preference number: 5 (lower is better)
Translates to: CKRRILYNPLSLANVCIKTQAKA*LQWNIL
Trigger: CAGTATGTTCCATTGCAGCAAAGCTTTCGCCTGTGT...CTTAATGCACACATTTGCCAATGACAGAGGGTTATACAGGATCCTTCTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp CCCACAGAATTGAGAGCCTTTCAACAGTACAGAGCCATAGATTACGAAGTTAAACTTGTGCAGAAGCTATaGTCTCTCTCAACTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PTELRAFQQYRAIDYEVKLVQKL*SLSTGK
Trigger: TTTCCCAGTTGAGAGAGACAATAGCTTCTGCACAAG...TTTAACTTCGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp GCAGGAAACAAGTACAATATGAGGAGGCCTGGAATGGAAGGGCACTTACTTTTCTACCATCATATATTCTaGTGCAGAAGCTATTGTCTC +
Preference number: 5 (lower is better)
Translates to: AGNKYNMRRPGMEGHLLFYHHIF*CRSYCL
Trigger: GAGACAATAGCTTCTGCACAAGAATATATGATGGTA...GAAAAGTAAGTGCCCTTCCATTCCAGGCCTCCTCATATTGTACTTGTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATACAGCAATTAGGTGCTTaGCCAAAAATAACTTGTCCC +
Preference number: 5 (lower is better)
Translates to: CLYQHPSAVSRERISKHIQQLGA*PKITCP
Trigger: GGGACAAGTTATTTTTGGCAAAGCACCTAATTGCTG...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGCCTGTATCAACATCCTTCAGCTGTAAGCAGGGAGAGAATCTCTAAACACATAAACAGACTTTCCACCTaGAAAATACGGCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: CLYQHPSAVSRERISKHINRLST*KIRHFS
Trigger: AGAGAAGTGCCGTATTTTCAAGGTGGAAAGTCTGTT...TATGTGTTTAGAGATTCTCTCCCTGCTTACAGCTGAAGGATGTTGATACAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS-3UTR CAA 90 bp TGGATCCTACCATCATATATTCTTGTGCAGAAGCTATTGTCTCTCTCAACTGGGGAGTGGTTTAGTGGTTaGATGAAAGAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: WILPSYILVQKLLSLSTGEWFSG*MKEQIS
Trigger: AGAAATCTGTTCTTTCATCAAACCACTAAACCACTC...CCCAGTTGAGAGAGACAATAGCTTCTGCACAAGAATATATGATGGTAGGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS TCA 72 bp TGCCCGCGGGCCGGACGCAGCGCTCGCCGTCCTCGATaGGGCAGCAGCTCTGGCCGTAGCCCGGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CPRAGRSARRPR*GSSSGRSPGRR
Trigger: CCGCCGCCCCGGGCTACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCCGCGGGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297109.11
ENST00000426761.2
ENST00000440364.6
ENST00000519683.1
ENST00000520159.1
ENST00000523198.5
CDS GCA 72 bp GCCGAGGGTCCCAGAGTCCGTCTCCAGCCCGGGCGCTaGCCTGCCCCGCGTCCGAGAGGCCCGGCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: AEGPRVRLQPGR*PAPRPRGPAPS
Trigger: CGAGGGAGCCGGGCCTCTCGGACGCGGGGCAGGGCAGCGCCCGGGCTGGAGACGGACTCTGGGACCCTCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS GCA 72 bp CAGGCAGGTGGAGAGCACTCAGGAATGTCAGTGTCGTaGTCGGGAGAATCTCCGCCATCGTCACTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: QAGGEHSGMSVS*SGESPPSSLVF
Trigger: GAAGACAAGTGACGATGGCGGAGATTCTCCCGAGCACGACACTGACATTCCTGAGTGCTCTCCACCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520159.1
ENST00000523198.5
CDS GCA 72 bp AGCTGGAACAGATCAACCTCAGGAATGTCAGTGTCGTaGTCGGGAGAATCTCCGCCATCGTCACTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: SWNRSTSGMSVS*SGESPPSSLVF
Trigger: GAAGACAAGTGACGATGGCGGAGATTCTCCCGAGCACGACACTGACATTCCTGAGGTTGATCTGTTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297109.11
CDS CAA 72 bp CAGTGTCGTGCTCGGGAGAATCTCCGCCATCGTCACTaGTCTTCCTCTTCCTTTTATTTCGGACACTCTGGA +
Preference number: 6 (lower is better)
Translates to: QCRARENLRHRH*SSSSFYFGHSG
Trigger: TCCAGAGTGTCCGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGCGGAGATTCTCCCGAGCACGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297109.11
ENST00000519683.1
ENST00000520159.1
ENST00000523198.5
CDS GCA 72 bp GTTTCTTTGACCTTTACCTCAGGAATGTCAGTGTCGTaGTCGGGAGAATCTCCGCCATCGTCACTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: VSLTFTSGMSVS*SGESPPSSLVF
Trigger: GAAGACAAGTGACGATGGCGGAGATTCTCCCGAGCACGACACTGACATTCCTGAGGTAAAGGTCAAAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519683.1
CDS CAA 72 bp GCAGCTGGAACAGATCAACCTCTAAAAGAGCTGTTCTaGCTTCAGGCAGGTGGAGAGCACTCAGGAATGTCA +
Preference number: 6 (lower is better)
Translates to: AAGTDQPLKELF*LQAGGEHSGMS
Trigger: TGACATTCCTGAGTGCTCTCCACCTGCCTGAAGCAAGAACAGCTCTTTTAGAGGTTGATCTGTTCCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523198.5
CDS CAA 72 bp CTGGAACAGATCAACCTGCCTCTAAAAGAGCTGTTCTaGCTTCAGGCAGGTGGAGAGCACTCAGGAATGTCA +
Preference number: 6 (lower is better)
Translates to: LEQINLPLKELF*LQAGGEHSGMS
Trigger: TGACATTCCTGAGTGCTCTCCACCTGCCTGAAGCAAGAACAGCTCTTTTAGAGGCAGGTTGATCTGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520159.1
CDS CAA 72 bp GCAGCTGGAACAGATCAACCTCTAAAAGAGCTGTTCTaGCTTCAGGCAGGTGGAGAGCACTTAAAAACAAAA +
Preference number: 6 (lower is better)
Translates to: AAGTDQPLKELF*LQAGGEHLKTK
Trigger: TTTTGTTTTTAAGTGCTCTCCACCTGCCTGAAGCAAGAACAGCTCTTTTAGAGGTTGATCTGTTCCAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520731.1
CDS CAA 72 bp CTGGAACAGATCAACCTGCCTCTAAAAGAGCTGTTCTaGCTTCAGGCAGGTGGAGAGCACTTAAAAACAAAA +
Preference number: 6 (lower is better)
Translates to: LEQINLPLKELF*LQAGGEHLKTK
Trigger: TTTTGTTTTTAAGTGCTCTCCACCTGCCTGAAGCAAGAACAGCTCTTTTAGAGGCAGGTTGATCTGTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523029.5