RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAP30BP (Homo sapiens)

Ensembl gene IDs: ENSG00000161526

Ensembl transcript IDs: ENST00000293208.13, ENST00000355423.7, ENST00000542343.5, ENST00000577292.5, ENST00000578288.5, ENST00000578354.5, ENST00000578909.1, ENST00000579864.5, ENST00000579877.5, ENST00000580322.5, ENST00000580484.5, ENST00000580601.5, ENST00000581207.5, ENST00000582022.5, ENST00000583170.5, ENST00000583329.5, ENST00000583536.5, ENST00000583737.5, ENST00000584240.5, ENST00000584557.1, ENST00000584667.6, ENST00000584861.5

Found 808 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCG +
Preference number: 1 (lower is better)
Translates to: RQEVIHLPRCSAPAG*AHRAPKDWGSPGQA
Trigger: CGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp TCCTGCTGGCTGCGCTCACCGGGCACCAAAGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCCCCACTCTCTGCACAGGTCAGGATC +
Preference number: 1 (lower is better)
Translates to: SCWLRSPGTKGLGQP*PGADASPLSAQVRI
Trigger: GATCCTGACCTGTGCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp CTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCTCCTaGTGGCTGCGCTCACCGGGCACCAAAGGACTGGGGCAGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LAKAGGDSSPPLLSS*WLRSPGTKGLGQPW
Trigger: CCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp GCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: AKAGGDSSPPLLSSC*LRSPGTKGLGQPWP
Trigger: TGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR TCA 90 bp GGGGTGGCAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGC +
Preference number: 1 (lower is better)
Translates to: GVAGALPGAGLACKQ*AAASPRQEVIHLPR
Trigger: GCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTGCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR TCA 90 bp GGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCTCAGCTCCTGCTGGCTGCGCTCACC +
Preference number: 1 (lower is better)
Translates to: GLPVNNELPPRQGRR*FISPAAQLLLAALT
Trigger: GGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp CGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCCTTCCATCTGGAATGCCAAACAGAA +
Preference number: 1 (lower is better)
Translates to: RQTPGGAWTDPVHSA*LPCCLSFHLECQTE
Trigger: TTCTGTTTGGCATTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp GGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAATGCCAAACAGAAGCTCCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: GGAWTDPVHSAWLPC*LSFHLECQTEAPLR
Trigger: CCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp TGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACAGTaGCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCC +
Preference number: 1 (lower is better)
Translates to: CPFHGAMLPPTKHPQ*PWPMRGRHRRSQEA
Trigger: GGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp GTCCACAGCGCCTGGCTCCCGTGCTGCCTGTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCC +
Preference number: 1 (lower is better)
Translates to: VHSAWLPCCLSFHLE*QTEAPLRWHLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCTGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp CTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTaGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCAC +
Preference number: 1 (lower is better)
Translates to: LGSGHWAARSFQVLG*PLRSLLGLLHNGAH
Trigger: GTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR CCA 90 bp GGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGCAGTaGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCT +
Preference number: 1 (lower is better)
Translates to: GPSPEIYKVAPPTGQ*SLGCTVLSSPRVAP
Trigger: AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp GTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCA +
Preference number: 1 (lower is better)
Translates to: VLKYTKWRLPLGSGH*AARSFQVLGWPLRS
Trigger: TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR TCA 90 bp ACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCCTCCCACTGGGCAGTGGTCACTGGG +
Preference number: 1 (lower is better)
Translates to: TEAPLRWHLGSRSQS*NIQSGASHWAVVTG
Trigger: CCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp GTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTT +
Preference number: 1 (lower is better)
Translates to: VTTAGRVAVVVRMVG*AIVVTGIAESHLLF
Trigger: AAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR CCA 90 bp CCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTaGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACCCTGTT +
Preference number: 1 (lower is better)
Translates to: PVHAQRHTRITTVTS*VTPLNSVPGLHHPV
Trigger: AACAGGGTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp TCCTGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTaGACTCAAGGGAGCACAGCTCCACCATCACCCGAGAACTGGCTG +
Preference number: 1 (lower is better)
Translates to: SWVCPKSDLVWGVLK*TQGSTAPPSPENWL
Trigger: CAGCCAGTTCTCGGGTGATGGTGGAGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR TCA 90 bp CAGAAAAGGTTACGTTCTTTTCTCTGTCTCTGCTTAGGACTTCACTaGAGGCAAGACAGGGCCGCCCTGCTGGAGCAGCACCACGGGACA +
Preference number: 1 (lower is better)
Translates to: QKRLRSFLCLCLGLH*RQDRAALLEQHHGT
Trigger: TGTCCCGTGGTGCTGCTCCAGCAGGGCGGCCCTGTCTTGCCTTCAGTGAAGTCCTAAGCAGAGACAGAGAAAAGAACGTAACCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR GCA 90 bp CACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTaGCCACCCACTGAAAGCAACACGGCCCTTCACAGCCTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: HKSTRCHFRTTFLNL*PPTESNTALHSLAS
Trigger: GGAAGCCAGGCTGTGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 90 bp AGGGAAGAGAATAAGACCAGGCAAAGCTGGGTGTCCACAGCTTTTTaGCATCCGTCAGCTCCTGGGGGACAGGAGCTTGGCACTACACAA +
Preference number: 1 (lower is better)
Translates to: REENKTRQSWVSTAF*HPSAPGGQELGTTQ
Trigger: TTGTGTAGTGCCAAGCTCCTGTCCCCCAGGAGCTGACGGATGGCAAAAAGCTGTGGACACCCAGCTTTGCCTGGTCTTATTCTCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580322.5
3UTR CCA 90 bp CCTTCCATCTGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCC +
Preference number: 1 (lower is better)
Translates to: PSIWNAKQKLLSGGI*GVGPSPEIYKVAPP
Trigger: GGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR TCA 90 bp CTTGCAAGTGATTTGAACATCTGCCAGGGGGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGG +
Preference number: 1 (lower is better)
Translates to: LASDLNICQGVLAGS*FHQATCSELFQKRR
Trigger: CCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR CCA 90 bp GTTGTCAACCCTGAGGCAATAGTCCCAACCAAGACTATTGAGTCTTaGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACAGAATGCAG +
Preference number: 1 (lower is better)
Translates to: VVNPEAIVPTKTIES*GTCELKHLPANRMQ
Trigger: CTGCATTCTGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGTTGGGACTATTGCCTCAGGGTTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 90 bp GGGTTCCTCAGTTTCTTAGCAAAGCTCTTTCTGAGAAGCTACCACTaGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTGT +
Preference number: 1 (lower is better)
Translates to: GFLSFLAKLFLRSYH*PSRAAQKRLRSFLC
Trigger: ACAGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAGAAAGAGCTTTGCTAAGAAACTGAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR GCA 90 bp TTCCCACCTGTCAGTTTCTTTTATAGAAGCCTCAGTCCCTTTCCCTaGCATGGTCTCTTAAGATTAAGACCAAACCAAACACGTAACCCA +
Preference number: 1 (lower is better)
Translates to: FPPVSFFYRSLSPFP*HGLLRLRPNQTRNP
Trigger: TGGGTTACGTGTTTGGTTTGGTCTTAATCTTAAGAGACCATGGCAGGGAAAGGGACTGAGGCTTCTATAAAAGAAACTGACAGGTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACGATCAAGGCGGCAGATaGGGCATACGTGGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHDQGGR*GIRGAR
Trigger: CCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATC...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCC +
Preference number: 2 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRGLGQP*PGADAS
Trigger: GGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACCACCCGAGAACTGGCTaGGTTTTGGGATCAAGGCGG +
Preference number: 2 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHHPRTG*VLGSRR
Trigger: CCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTG...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCC +
Preference number: 2 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSGLGQP*PGADAS
Trigger: GGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCC...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACAGCCCTGGCCAGGCGCTaGCGCCTCCCCACTCTCTGC +
Preference number: 2 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTALARR*RLPTLC
Trigger: GCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGC...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTGAACCCCTGGTCTaGGAAACCCGTTTCAACCCC +
Preference number: 2 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHSEPLV*ETRFNP
Trigger: GGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGA...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGTGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWCPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: VLEPLALVVTVTTAGRVATPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGCAGATGGGGCATACGTaGGGCTCGGGGACTCCCGCC +
Preference number: 2 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRQMGHT*GSGTPA
Trigger: GGCGGGAGTCCCCGAGCCCCACGTATGCCCCATCTG...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTGGGGGACATGTGAGCTaGAGCATTTGCCTGCAAACA +
Preference number: 2 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSGGHVS*SICLQT
Trigger: TGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCC...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTGGTGTGTCCAAAAAGTaGTCTGGTCTGGGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSGVSKK*SGLGSA
Trigger: AGCACTCCCCAGACCAGATCACTTTTTGGACACACC...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAGCCCTGGCCAGGCGCTaGCGCCTCCCCACTCTCTGC +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVALARR*RLPTLC
Trigger: GCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGC...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: VLEPLALVVTVTTAGRVAAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 2 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 2 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR TCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTTTCTGGAAACTGGCTTaGCTTCAAAAGCCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSFWKLA*LQKPSW
Trigger: CCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAA...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCT +
Preference number: 2 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSRQGRR*FISPAA
Trigger: AGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCG...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR GCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTCCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 2 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDSAPAG*AHRAPK
Trigger: CTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGA...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: ALVVTVTTAGRVAVVVRMVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...CATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR-3UTR CCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp ATGAGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: MSCRLAKAGGDSSPPLLSLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...GCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAGAGCCCAGTGGCCACTaGTGCTGCCCAGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVEPSGH*CCPGAA
Trigger: AGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTC...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCAGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: SGHWAARSFQVLGWPLRSDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: STVPLANEGPPSEVTGSLLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGAACTGGCTGGGTTTTaGGATCAAGGCGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRELAGF*DQGGRW
Trigger: CCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACT +
Preference number: 2 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLKSDLV*GVLKCT
Trigger: AGTGCACTTGAGCACTCCCCAGACCAGATCACTTTT...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAAGAGGAAGGGTGGGGTaGCAGGAGCCCTCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVRGRVG*QEPSQE
Trigger: CTCCTGGGAGGGCTCCTGCCACCCCACCCTTCCTCT...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGGGGGACATGTGAGCTaGAGCATTTGCCTGCAAACA +
Preference number: 2 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRGGHVS*SICLQT
Trigger: TGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: VLEPLALVVTVTTAGRVASLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR GCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTACTGACCTCCTGAAGTaGCCGAGTGTGTGTGTACGG +
Preference number: 2 (lower is better)
Translates to: STVPLANEGPPSEVTGSLTDLLK*PSVCVR
Trigger: CCGTACACACACACTCGGGCACTTCAGGAGGTCAGT...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACACTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACACACCCGAGAACTGGCTaGGTTTTGGGATCAAGGCGG +
Preference number: 2 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTHPRTG*VLGSRR
Trigger: CCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTG...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAACTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACC +
Preference number: 2 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGELLSSC*LRSPGT
Trigger: GGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAG...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CAA 90 bp GCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACCCTGT +
Preference number: 2 (lower is better)
Translates to: ACPCPEAYTDNNGDF*GHPSEQRPRPPSPC
Trigger: ACAGGGTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp ATGAGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: MSCRLAKAGGDSSPPLLSSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...GCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR-3UTR GCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTGCCTGCAAACAGAATaGAGGAGAGGCCAGTGCATC +
Preference number: 2 (lower is better)
Translates to: STVPLANEGPPSEVTGSLCLQTE*RRGQCI
Trigger: GATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCA...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 2 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACATTTTCACAGTCCCTCTaGGGCATGAGTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTFSQSL*GMSGEQ
Trigger: CTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAA...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 2 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEICPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR TCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 2 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR TCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTGGGGGACATGTGAGCTaGAGCATTTGCCTGCAAACA +
Preference number: 2 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSGGHVS*SICLQT
Trigger: TGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCC...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR-3UTR TCA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACAGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR GCA 90 bp ACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACATCTGGTCTGGGGAGTaGTCAAGTGCACTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TTVTSWVTPLNSVPGLHHIWSGE*SSALKG
Trigger: TCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGAT...GTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp ATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: IWGVGPSPEIYKVAPPTGVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...CCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 2 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACATTTTCACAGTCCCTCTaGGGCATGAGTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTFSQSL*GMSGEQ
Trigger: CTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAA...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp GCAAAGCTCTTTCTGAGAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGTGCTTAGGACTTCACTaGAGGCAAGACAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: AKLFLRSYHWPSRAAQKRCLGLH*RQDRAA
Trigger: GGCGGCCCTGTCTTGCCTTCAGTGAAGTCCTAAGCA...CCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAGAAAGAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR-3UTR GCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: NAGEASASEMPRGKNTALSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACCCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 2 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAAACTCCCGCCTGTCCATaGCCAGAGGCATACACGGAT +
Preference number: 2 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGETPACP*PEAYTD
Trigger: ATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGT...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCGTGTCCACAGCTTTTTaGCATCCGTCAGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTVSTAF*HPSAPG
Trigger: CCCAGGAGCTGACGGATGGCAAAAAGCTGTGGACAC...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580322.5
3UTR-3UTR CCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: NAGEASASEMPRGKNTALTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTACCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 2 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCTTCAAAAGCCTTCCTaGGTGTGTCCAAAAAGTGAT +
Preference number: 2 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRLQKPS*VCPKSD
Trigger: ATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAG...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGGGGGACAGGAGCTTaGCACTACACAAAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSWGTGA*HYTKEA
Trigger: TGCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCA...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580322.5
3UTR-3UTR GCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACACTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCCCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 2 (lower is better)
Translates to: AYTDNNGDFLGHPSEQRPPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...GGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGGTCCAAAAAGTGATCTaGTCTGGGGAGTGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: PTLCTGQDLTPALLETGLVQKVI*SGECSS
Trigger: ACTTGAGCACTCCCCAGACCAGATCACTTTTTGGAC...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAATCTGAACCCCTGGTCTaGGAAACCCGTTTCAACCCC +
Preference number: 2 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGESEPLV*ETRFNP
Trigger: GGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGA...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 2 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAGGTGTGTCCAAAAAGTaGTCTGGTCTGGGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQGVSKK*SGLGSA
Trigger: AGCACTCCCCAGACCAGATCACTTTTTGGACACACC...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR GCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp ATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: IWGVGPSPEIYKVAPPTGLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...CCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: NAGEASASEMPRGKNTALEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 2 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCCGGGCACCAAAGGACTaGGGCAGCCCTGGCCAGGCG +
Preference number: 2 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPRAPKD*GSPGQA
Trigger: CGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GAGTTCCTGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: EFLGVSLFCFCIILWVISEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...GCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR-3UTR TCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: NAGEASASEMPRGKNTALVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp ACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGGGGGTCTCGCTGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 2 (lower is better)
Translates to: TCSELFQKRRPRVPGGLAVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...AGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR-3UTR GCA 90 bp AGTTGGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 2 (lower is better)
Translates to: SWCQARQWHRTGSASRRCSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...GCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAAGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGEACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGGAACTGGCTGGGTTTTaGGATCAAGGCGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLELAGF*DQGGRW
Trigger: CCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTC...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AGTTGGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 2 (lower is better)
Translates to: SWCQARQWHRTGSASRRCSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...GCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR CAA 90 bp CCAACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTaGCCTGCAAACAGAATGCAGGAGAGGCCAGTGCATCTGAGATGC +
Preference number: 2 (lower is better)
Translates to: PTKTIESWGTCELKH*PANRMQERPVHLRC
Trigger: GCATCTCAGATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR GCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAACCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 2 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGEPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 2 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTACCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 2 (lower is better)
Translates to: AGEASASEMPRGKNTALLPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000582022.5
3UTR-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTAAGACTATTGAGTCTTaGGGGACATGTGAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSKTIES*GTCELK
Trigger: CTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTT...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAGTCCAAAAAGTGATCTaGTCTGGGGAGTGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQVQKVI*SGECSS
Trigger: ACTTGAGCACTCCCCAGACCAGATCACTTTTTGGAC...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp TGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: WRDLDFIRRHVPNSFRKGEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...TCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR-3UTR GCA 90 bp GCAAAGCTCTTTCTGAGAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGCTCAGTCCCTTTCCCTaGCATGGTCTCTTAAGATTA +
Preference number: 2 (lower is better)
Translates to: AKLFLRSYHWPSRAAQKRLSPFP*HGLLRL
Trigger: TAATCTTAAGAGACCATGGCAGGGAAAGGGACTGAG...CCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAGAAAGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: NAGEASASEMPRGKNTALACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCCCCTGTTGTCAACCCTaGGGCAATAGTCCCAACCAA +
Preference number: 2 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVIPCCQP*GNSPNQ
Trigger: TTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGG...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp GGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 2 (lower is better)
Translates to: GILISSGDMFRTLSEKEAVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...GGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR-3UTR TCA 90 bp GGCACAGAACTGGATCAGCTTCTCGTAGATGCTAGGGTTCCGAAATTCTTTCTTGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 2 (lower is better)
Translates to: GTELDQLLVDARVPKFFLVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...AAGAAAGAATTTCGGAACCCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR TCA 90 bp TGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTCAGGTATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: WGSRFSASVLSFGSSASGILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...ACCTGAGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR GCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACAATTCATCTCCCCCGCTaGTCAGCTCCTGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: VLPNHLTTLYYCDFREETIHLPR*SAPAGC
Trigger: GCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAAT...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGACTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: SASEMPRGKNTALLIGGRLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGATTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LSLLSICNSCAGSGSGGGLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...TCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542343.5
ENST00000582022.5
3UTR-3UTR CCA 90 bp AGGCTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTCCCTTTCCCTGCCATaGTCTCTTAAGATTAAGACC +
Preference number: 2 (lower is better)
Translates to: RLTGGKVDCGILPTCQFLSLSLP*SLKIKT
Trigger: GGTCTTAATCTTAAGAGACCATGGCAGGGAAAGGGA...AAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR-3UTR TCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACACTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGG +
Preference number: 2 (lower is better)
Translates to: VLPNHLTTLYYCDFREETLACKQ*AAASPR
Trigger: CCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAG...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp AGGAGTCCTCAGACCAGCCATGGGGATCAAACATATCCTTTGGGTAGTTGGTGCTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: RSPQTSHGDQTYPLGSWCFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...GCACCAACTACCCAAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR CCA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTATTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: AGEASASEMPRGKNTALLLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR-3UTR CCA 90 bp TTTCCAATTTGTCCATCTCAATTTTCTGGGCCTTGGCTAATGCCTCATAGTAGGTGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 2 (lower is better)
Translates to: FPICPSQFSGPWLMPHSRCQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...CCTACTATGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGACAAATTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR CCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACACCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 2 (lower is better)
Translates to: VLPNHLTTLYYCDFREETPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR-3UTR CCA 90 bp ATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: ISSGDMFRTLSEKEATSSFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...GGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR-3UTR TCA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCTTCTGGAAACTGGCTTaGCTTCAAAAGCCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPFWKLA*LQKPSW
Trigger: CCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAA...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACAAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACT +
Preference number: 2 (lower is better)
Translates to: VLPNHLTTLYYCDFREETKSDLV*GVLKCT
Trigger: AGTGCACTTGAGCACTCCCCAGACCAGATCACTTTT...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR TCA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCAATCGCCAAAGATCATaGAGGGTAAATAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPNRQRS*RVNSLL
Trigger: GAGGAGACTATTTACCCTTCATGATCTTTGGCGATT...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CCA 90 bp CCTTTGGATAATGTAGTTCATATCCATTCCCTCCTTTATCTTTCGTTCATAAAGTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: PLDNVVHIHSLLYLSFIKLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...CTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR CCA 72 bp GCTCCTGCTGGCTGCGCTCACCGGGCACCAAAGGACTaGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: APAGCAHRAPKD*GSPGQALTPPH
Trigger: GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp CTGCGCTCACCGGGCACCAAAGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCCCCACTCTCTGCACAG +
Preference number: 3 (lower is better)
Translates to: LRSPGTKGLGQP*PGADASPLSAQ
Trigger: CTGTGCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTaGTCAGCTCCTGCTGGCTGCGCTCACCGGGCACCA +
Preference number: 3 (lower is better)
Translates to: ASPRQEVIHLPR*SAPAGCAHRAP
Trigger: TGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GTGATTCATCTCCCCCGCTGCTCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAGGACTGGGGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VIHLPRCSAPAG*AHRAPKDWGSP
Trigger: AGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCTCCTaGTGGCTGCGCTCACCGGGCACCAAAGGACTGGGG +
Preference number: 3 (lower is better)
Translates to: AGGDSSPPLLSS*WLRSPGTKGLG
Trigger: CCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp GGAGGTGATTCATCTCCCCCGCTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACCAAAGGACTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: GGDSSPPLLSSC*LRSPGTKGLGQ
Trigger: CTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp GGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: GQWSLGCTVLSSPRVAPQEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...CTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR CCA 72 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCCTTCCATCTGGAATGC +
Preference number: 3 (lower is better)
Translates to: PGGAWTDPVHSA*LPCCLSFHLEC
Trigger: GCATTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp GGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: GCTVLSSPRVAPQVTAWPEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...AGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CAA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 3 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR GCA 72 bp GGGCATACGTGGGGCTCGGGGACTCCCGCCTGTCCATaGCCAGAGGCATACACGGATAACAACGGTGACTTC +
Preference number: 3 (lower is better)
Translates to: GHTWGSGTPACP*PEAYTDNNGDF
Trigger: GAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGAGCCCCACGTATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp CACGGTGCCATGCTGCCTCCCACAAAACATCCACAGTaGCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: HGAMLPPTKHPQ*PWPMRGRHRRS
Trigger: TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GCCGGCTCCACGTCTACTGCCCTTTCCACGGTGCCATaGTGCCTCCCACAAAACATCCACAGTGCCCTTGGC +
Preference number: 3 (lower is better)
Translates to: AGSTSTALSTVP*CLPQNIHSALG
Trigger: GCCAAGGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GAGGTGCCGGCTCCACGTCTACTGCCCTTTCCACGGTaGCATGCTGCCTCCCACAAAACATCCACAGTGCCC +
Preference number: 3 (lower is better)
Translates to: EVPAPRLLPFPR*HAASHKTSTVP
Trigger: GGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGGAGCCGGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCTCCCAGGAGCAGGGCTaGCCTGTAAACAATGAGCTG +
Preference number: 3 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRSQEQG*PVNNEL
Trigger: CAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 3 (lower is better)
Translates to: VLEPLALVVTVTTAGRVAVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR TCA 72 bp GTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCTCAGCTCCTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: VNNELPPRQGRR*FISPAAQLLLA
Trigger: AGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCATTGTTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR TCA 72 bp GGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCAT +
Preference number: 3 (lower is better)
Translates to: GALPGAGLACKQ*AAASPRQEVIH
Trigger: ATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp GCCTGGCTCCCGTGCTGCCTGTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: AWLPCCLSFHLE*QTEAPLRWHLG
Trigger: CCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAG +
Preference number: 3 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRNNGDF*GHPSEQ
Trigger: CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTT...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACAACATCCACAGTGCCCTaGGCCAATGAGGGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTTSTVP*ANEGPP
Trigger: TGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 3 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR GCA 72 bp GGCTCCACGTCTACTGCCCTTTCCACGGTGCCATGCTaGCTCCCACAAAACATCCACAGTGCCCTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: GSTSTALSTVPC*LPQNIHSALGQ
Trigger: TTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 3 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CAA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACCTGGCTTCCTTCTTTaGACACACAGCCCTTCCGCT +
Preference number: 3 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSPGFLL*THSPSA
Trigger: AGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGG...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000582022.5
3UTR TCA 72 bp CCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCCTCCCACTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PLRWHLGSRSQS*NIQSGASHWAV
Trigger: CACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR TCA 72 bp TGCCTCCCACAAAACATCCACAGTGCCCTTGGCCAATaGGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: CLPQNIHSALGQ*GAAIGGHRKPF
Trigger: AAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR GCA 72 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTaGCCGAGTGTGTGTGTACGGGGAGAGTGGACTCAA +
Preference number: 3 (lower is better)
Translates to: PIEEGVRTDLLK*PSVCVRGEWTQ
Trigger: TTGAGTCCACTCTCCCCGTACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp GCCCAGAGGCATACACGGATAACAACGGTGACTTCTTaGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: AQRHTRITTVTS*VTPLNSVPGLH
Trigger: ATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAG +
Preference number: 3 (lower is better)
Translates to: PTLCTGQDLTPALLETGLNNGDF*GHPSEQ
Trigger: CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTT...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTCTGGGGGACAGGAGCTaGGCACTACACAAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPLGDRS*ALHKRG
Trigger: GCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCAG...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580322.5
3UTR TCA 72 bp AGAGCTTTAAAGCCCCATCGAGGAAGGGGTGAGAACTaGCCTCCTGAAGTGCCCGAGTGTGTGTGTACGGGG +
Preference number: 3 (lower is better)
Translates to: RALKPHRGRGEN*PPEVPECVCTG
Trigger: CCCCGTACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGGGCTTTAAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp CCTGAAATATACAAAGTGGCGCCTCCCACTGGGCAGTaGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGG +
Preference number: 3 (lower is better)
Translates to: PEIYKVAPPTGQ*SLGCTVLSSPR
Trigger: CCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp TTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGTCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: LEPLALVVTVTTAGRVAVSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...CACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542343.5
ENST00000582022.5
3UTR GCA 72 bp TGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTaGACTCAAGGGAGCACAGCTCCACCATCACCCGAG +
Preference number: 3 (lower is better)
Translates to: CPKSDLVWGVLK*TQGSTAPPSPE
Trigger: CTCGGGTGATGGTGGAGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp GGTGGTGAGGATGGTGGGCTGGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: GGEDGGLGYRCH*DSRIPLALSLL
Trigger: CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
3UTR-3UTR CAA 90 bp CGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGGGGGTCTCGGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 3 (lower is better)
Translates to: RHVPNSFRKGGHEFLGVSGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...CGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR GCA 72 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTaGCCACCCACTGAAAGCAACACGGCCCTTCACAGC +
Preference number: 3 (lower is better)
Translates to: TRCHFRTTFLNL*PPTESNTALHS
Trigger: GCTGTGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CCA 72 bp AAGCCTTCCTGGGTGTGTCCAAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACTCAAGGGAGCACAGCT +
Preference number: 3 (lower is better)
Translates to: KPSWVCPKSDLV*GVLKCTQGSTA
Trigger: AGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCAGGAAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 3 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582022.5
3UTR TCA 72 bp CAACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTaGAGCATTTGCCTGCAAACAGAATGCAGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: QPRLLSLGGHVS*SICLQTECRRG
Trigger: GCCTCTCCTGCATTCTGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR TCA 72 bp GATTTGAACATCTGCCAGGGGGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGTTCCGAACTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: DLNICQGVLAGS*FHQATCSELFQ
Trigger: CTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
3UTR GCA 72 bp AGCCATGGGGATCAAACATATCCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCACAGAACTGGATCAGCT +
Preference number: 3 (lower is better)
Translates to: SHGDQTYPLGSW*QARQWHRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGATATGTTTGATCCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR CCA 72 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTG +
Preference number: 3 (lower is better)
Translates to: WNAKQKLLSGGI*GVGPSPEIYKV
Trigger: CACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTTCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542343.5
ENST00000582022.5
3UTR-3UTR CAA 90 bp ATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 3 (lower is better)
Translates to: ISSGDMFRTLSEKEATSSCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...GGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR-3UTR CAA 90 bp ATAGTAGGAGTCCTCAGACCAGCCATGGGGATCAAACATATCCTTTGGGTAGTTCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 3 (lower is better)
Translates to: IVGVLRPAMGIKHILWVVLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...AACTACCCAAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579877.5
3UTR TCA 72 bp TTCAGAGAAGAAACAGGCTTACAGAGGTTAAGGGCTTaGGACCACTCAACTGGTTTTAAGTGGAATCCAGAC +
Preference number: 3 (lower is better)
Translates to: FREETGLQRLRA*DHSTGFKWNPD
Trigger: GTCTGGATTCCACTTAAAACCAGTTGAGTGGTCTCAAGCCCTTAACCTCTGTAAGCCTGTTTCTTCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR-3UTR CAA 90 bp CTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 3 (lower is better)
Translates to: LFCFCIILWVISLRFFSLLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...GAGACTGAAAAACCTGAGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR TCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCGCCCTGGCCAGGCGCTaGCGCCTCCCCACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCALARR*RLPTLC
Trigger: GCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGC...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCCTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACC +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPLLSSC*LRSPGT
Trigger: GGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAG...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLPVHSA*LPCCLS
Trigger: GGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGG...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCAGATGGGGCATACGTaGGGCTCGGGGACTCCCGCC +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCQMGHT*GSGTPA
Trigger: GGCGGGAGTCCCCGAGCCCCACGTATGCCCCATCTG...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCAGAGGAAGGGTGGGGTaGCAGGAGCCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLRGRVG*QEPSQE
Trigger: CTCCTGGGAGGGCTCCTGCCACCCCACCCTTCCTCT...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTGCCCTGGCCAGGCGCTaGCGCCTCCCCACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPALARR*RLPTLC
Trigger: GCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGC...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTAGTGCCCTTGGCCAATaGGGGGCCGCCATCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACSALGQ*GAAIGG
Trigger: ACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACT...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGCCCAGGAGGAGGCGGTaGCCGCCCGCACAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVPRRRR*PPAQGK
Trigger: CTTCCCCTGTGCGGGCGGGCACCGCCTCCTCCTGGG...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR GCA 90 bp TGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCCCAGGAGGAGGCGGTaGCCGCCCGCACAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WAARSFQVLGWPLRSLLGPRRRR*PPAQGK
Trigger: CTTCCCCTGTGCGGGCGGGCACCGCCTCCTCCTGGG...GCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR GCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCCAGGGGCTaGTGTGGGGCAGAGATAACA +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPVLPRG*CGAEIT
Trigger: TGTTATCTCTGCCCCACAGCAGCCCCTGGGCAGCAC...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCGATCAAGGCGGCAGATaGGGCATACGTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLDQGGR*GIRGAR
Trigger: CCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATC...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTCATCCACAGTGCCCTTaGCCAATGAGGGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSHPQCP*PMRGRH
Trigger: ATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATG...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTCCGCTGCTCAGCTCCTaGTGGCTGCGCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: GCTVLSSPRVAPQVTAWPPLLSS*WLRSPG
Trigger: GCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGG...AGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACAGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTGLGQP*PGADAS
Trigger: GGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCC...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHGLGQP*PGADAS
Trigger: GGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCC...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGAGCCCAGTGGCCACTaGTGCTGCCCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QEPSQEQGLPVNNELPPREPSGH*CCPGAA
Trigger: AGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCCGGTCCCCAGGCGCTaGAGACACGTCCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPPVPRR*RHVPAT
Trigger: TGTTGCAGGGACGTGTCTGCAGCGCCTGGGGACCGG...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR GCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTATTCATCTCCCCCGCTaGTCAGCTCCTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGAGGDRDNSWQGGCGGIHLPR*SAPAGC
Trigger: GCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAAT...ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQWSLGCTVLSSPRVAPQSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...CTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCCCCTGTTGTCAACCCTaGGGCAATAGTCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPPCCQP*GNSPNQ
Trigger: TTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGG...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGTCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTTCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LIGGRPQVVRGQTLSTAPSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...AGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQWSLGCTVLSSPRVAPQADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...CTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGACTGACCTCCTGAAGTaGCCGAGTGTGTGTGTACGG +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLTDLLK*PSVCVR
Trigger: CCGTACACACACACTCGGGCACTTCAGGAGGTCAGT...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGGTGTCCACAGCTTTTTaGCATCCGTCAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLVSTAF*HPSAPG
Trigger: CCCAGGAGCTGACGGATGGCAAAAAGCTGTGGACAC...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR CCA 90 bp GCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AAGAGGDRDNSWQGGCGGLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCTVLSSPRVAPQVTAWPSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...AGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCGAACTGGCTGGGTTTTaGGATCAAGGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCELAGF*DQGGRW
Trigger: CCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTC...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACCTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDLLSSC*LRSPGT
Trigger: GGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAG...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACAGAGCCCAGTGGCCACTaGTGCTGCCCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTEPSGH*CCPGAA
Trigger: AGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTC...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCTGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QWSLGCTVLSSPRVAPQVCPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...GACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGGGGGGACATGTGAGCTaGAGCATTTGCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLGGHVS*SICLQT
Trigger: TGTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCC...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGCCCTGGCCAGGCGCTaGCGCCTCCCCACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSALARR*RLPTLC
Trigger: GCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ATGAGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCCCTCTGCCCACCCACTaGAAGCAACACGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MSCRLAKAGGDSSPPLLSPLPTH*KQHGPS
Trigger: TGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGG...GCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACTCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTGCCTGCAAACAGAATaGAGGAGAGGCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLCLQTE*RRGQCI
Trigger: GATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCA...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTTGGGGAGTGCTCAAGTaGACTCAAGGGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: AAGAGGDRDNSWQGGCGGWGVLK*TQGSTA
Trigger: AGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCA...ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR GCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTTCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPSAPAG*AHRAPK
Trigger: CTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGA...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTATCCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHYPLGS*CQARQW
Trigger: CCATTGACGAGCTTGGCACCAACTACCCAAAGGATA...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp TTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LEPLALVVTVTTAGRVAVVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...CACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGCCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CACCGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: HRAPKDWGSPGQALTPPHKSDLV*GVLKCT
Trigger: AGTGCACTTGAGCACTCCCCAGACCAGATCACTTTT...GTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTACGGGCACCAAAGGACTaGGGCAGCCCTGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVRAPKD*GSPGQA
Trigger: CGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCCTGCTCAGCTCCTGCTaGCTGCGCTCACCGGGCACC +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSLLSSC*LRSPGT
Trigger: GGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAG...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGGCCCTTCCGCTCCAGTaGAGAATCGCCAAAGATCAT +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLALPLQ*RIAKDH
Trigger: ATGATCTTTGGCGATTCTCCACTGGAGCGGAAGGGC...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCGCCCTTCCGCTCCAGTaGAGAATCGCCAAAGATCAT +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCALPLQ*RIAKDH
Trigger: ATGATCTTTGGCGATTCTCCACTGGAGCGGAAGGGC...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACCGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHRQGRR*FISPAA
Trigger: AGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCG...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTCCTCTGCCCACCCACTaGAAGCAACACGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: STVPLANEGPPSEVTGSLPLPTH*KQHGPS
Trigger: TGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGG...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTCCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACPLGSW*QARQWH
Trigger: GTGCCATTGACGAGCTTGGCACCAACTACCCAAAGG...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: WAARSFQVLGWPLRSLLGAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...GCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCATCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSSAPAG*AHRAPK
Trigger: CTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGA...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTGTGCTGCCCAGGGGCTaGTGTGGGGCAGAGATAACA +
Preference number: 4 (lower is better)
Translates to: STVPLANEGPPSEVTGSLVLPRG*CGAEIT
Trigger: TGTTATCTCTGCCCCACAGCAGCCCCTGGGCAGCAC...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCTGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLCQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: PTLCTGQDLTPALLETGLAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGGAACTGGCTGGGTTTTaGGATCAAGGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWELAGF*DQGGRW
Trigger: CCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTC...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCACCCGAGAACTGGCTaGGTTTTGGGATCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRHPRTG*VLGSRR
Trigger: CCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTG...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTGGACTGGGGCAGCCCTaGCCAGGCGCTGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRGLGQP*PGADAS
Trigger: GGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCC...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCCGGGCACCAAAGGACTaGGGCAGCCCTGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AYTDNNGDFLGHPSEQRPRAPKD*GSPGQA
Trigger: CGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG...GGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGAGAGGAAGGGTGGGGTaGCAGGAGCCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PTLCTGQDLTPALLETGLRGRVG*QEPSQE
Trigger: CTCCTGGGAGGGCTCCTGCCACCCCACCCTTCCTCT...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPLACKQ*AAASPR
Trigger: CCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAG...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGCTGGCTTCCTTCTTTTaGCACACAGCCCTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GQWSLGCTVLSSPRVAPQLASFF*HTALPL
Trigger: GAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAG...CTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATCTGGCTTCCTTCTTTTaGCACACAGCCCTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GAGGDRDNSWQGGCGGEDLASFF*HTALPL
Trigger: GAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAG...ATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR TCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCTGGCTTCCTTCTTTTaGCACACAGCCCTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRLASFF*HTALPL
Trigger: GAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAG...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCAGGAAGGGGTGAGAACTaGCCTCCTGAAGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSGRGEN*PPEVPE
Trigger: CTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCC...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ATGAGCTGCCGCCTCGCCAAGGCAGGAGGTGATTCATCTCCCCCGCTGCTCAGCCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: MSCRLAKAGGDSSPPLLSQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...GCTGAGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCGAGGCGGCAGCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCGCCTCCCCACTCTCTaGACAGGTCAGGATCTCACC +
Preference number: 4 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLRLPTL*TGQDLT
Trigger: GGTGAGATCCTGACCTGTGCAGAGAGTGGGGAGGCG...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR GCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAACCGCTGCTCAGCTCCTaGTGGCTGCGCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQPLLSS*WLRSPG
Trigger: GCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGG...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTGCACTCAAGGGCCGCTGCTCAGCTCCTaGTGGCTGCGCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: WVCPKSDLVWGVLKCTQGPLLSS*WLRSPG
Trigger: GCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGG...CCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTGCCCTTTCCACGGTaGCATGCTGCCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSLPFPR*HAASHK
Trigger: TTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAG...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QWSLGCTVLSSPRVAPQVEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...GACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTTCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSSISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLASGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAAGTGGCGCCTCCCACTaGGCAGTGGTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVSGASH*AVVTGL
Trigger: CAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACT...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GGTAAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGCAGATGGGGCATACGTaGGGCTCGGGGACTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GKNTALLIGGRPQVVRGQQMGHT*GSGTPA
Trigger: GGCGGGAGTCCCCGAGCCCCACGTATGCCCCATCTG...CTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTCCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 4 (lower is better)
Translates to: VLEPLALVVTVTTAGRVAPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp GCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTTCCATCTCAATTTTCTaGGCCTTGGCTAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: AAGAGGDRDNSWQGGCGGSISIF*ALARVP
Trigger: CGGAACCCTAGCCAAGGCCCAGAAAATTGAGATGGA...ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542343.5
CDS-3UTR TCA 90 bp GTCTTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: VLEPLALVVTVTTAGRVAVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...AGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp TTGGAGCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LEPLALVVTVTTAGRVAVVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...CACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp TCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGACGTGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLLSICNSCAGSGSGGGRGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LIGGRPQVVRGQTLSTAPVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...AGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCACGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPRQGRR*FISPAA
Trigger: AGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCG...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGCTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQLACKQ*AAASPR
Trigger: CCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAG...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR TCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACACTTGCCTGTAAACAATaGGCTGCCGCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTLACKQ*AAASPR
Trigger: CCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAG...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCAGTGCCCTTGGCCAATaGGGGGCCGCCATCGGAGGT +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTSALGQ*GAAIGG
Trigger: ACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACT...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GTGAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VRMVGWAIVVTGIAESHLSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...CAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACAAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGTGCCTGCAAACAGAATaGAGGAGAGGCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: ALVVTVTTAGRVAVVVRMCLQTE*RRGQCI
Trigger: GATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCA...CATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000582022.5
CDS-3UTR GCA 90 bp TCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTGGGGAGTGCTCAAGTaGACTCAAGGGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: STVPLANEGPPSEVTGSLWGVLK*TQGSTA
Trigger: AGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCA...AAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCTCCTCAGACCAGCCATaGGGATCAAACATATCCTTT +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCSSDQP*GSNISF
Trigger: AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGA...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCTCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCSISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACACTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAACCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQPVHSA*LPCCLS
Trigger: GGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGG...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGPVHSA*LPCCLS
Trigger: GGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGG...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: AYTDNNGDFLGHPSEQRPAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...GGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCAGATGGGGCATACGTaGGGCTCGGGGACTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GLGYRCHWDSRIPLALSLQMGHT*GSGTPA
Trigger: GGCGGGAGTCCCCGAGCCCCACGTATGCCCCATCTG...AAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp CAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCTCTGAACCCCTGGTCTaGGAAACCCGTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: QWSLGCTVLSSPRVAPQVSEPLV*ETRFNP
Trigger: GGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGA...GACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTTCTGAACCCCTGGTCTaGGAAACCCGTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPSEPLV*ETRFNP
Trigger: GGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGA...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACCATCCACAGTGCCCTTaGCCAATGAGGGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TTVTSWVTPLNSVPGLHHHPQCP*PMRGRH
Trigger: ATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATG...GTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: GCTVLSSPRVAPQVTAWPIRLGL*IFRVNC
Trigger: GCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGAT...AGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SRIPLALSLLSICNSCAGGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR TCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCCCTGTTGTCAACCCTaGGGCAATAGTCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSPCCQP*GNSPNQ
Trigger: TTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGG...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCCTCTGCCCACCCACTaGAAGCAACACGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLAPLPTH*KQHGPS
Trigger: TGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGG...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR GCA 90 bp CTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGATCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLLSICNSCAGSGSGGGSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...TCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTTCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTCCGGTCCCCAGGCGCTaGAGACACGTCCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGPVPRR*RHVPAT
Trigger: TGTTGCAGGGACGTGTCTGCAGCGCCTGGGGACCGG...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR GCA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GTGAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: VRMVGWAIVVTGIAESHLAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...CAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCACTCCCGCCTGTCCATaGCCAGAGGCATACACGGAT +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSTPACP*PEAYTD
Trigger: ATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGT...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCAACTGACCTCCTGAAGTaGCCGAGTGTGTGTGTACGG +
Preference number: 4 (lower is better)
Translates to: SGHWAARSFQVLGWPLRSTDLLK*PSVCVR
Trigger: CCGTACACACACACTCGGGCACTTCAGGAGGTCAGT...TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR GCA 90 bp CTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTATCTTCCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LPGGSGGILISSGDMFRTIFQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGGAAGAT...AGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTTCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACSISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PTLCTGQDLTPALLETGLLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HWDSRIPLALSLLSICNSPVHSA*LPCCLS
Trigger: GGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGG...GCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGCCTGTCCACAGCGCCTaGCTCCCGTGCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLPVHSA*LPCCLS
Trigger: GGACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGG...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTTCTCCTCTGAACCCCTaGTCTGGGAAACCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGSPLNP*SGKPVS
Trigger: TGAAACGGGTTTCCCAGACCAGGGGTTCAGAGGAGA...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGTCTCCTCTGAACCCCTaGTCTGGGAAACCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRSPLNP*SGKPVS
Trigger: TGAAACGGGTTTCCCAGACCAGGGGTTCAGAGGAGA...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: WAARSFQVLGWPLRSLLGVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...GCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTTGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRCPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGTCTTGGGGGACATGTaGGCTGAAGCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSVLGDM*AEAFAC
Trigger: GCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGAC...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCTCTCCTCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESSPQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGA...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GTGGTGAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VVRMVGWAIVVTGIAESHQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...GTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SRIPLALSLLSICNSCAGSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGCAGACCCCAGGTGGTaGGTGGACAGACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGADPRW*VDRPCP
Trigger: TGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGC...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCACTCCCGCCTGTCCATaGCCAGAGGCATACACGGAT +
Preference number: 4 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSTPACP*PEAYTD
Trigger: ATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGT...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCCATCGAGGAAGGGGTGAGAACTGACCTCCTGAAGTGCCCGAGTGTGTGTGTAACTCCCGCCTGTCCATaGCCAGAGGCATACACGGAT +
Preference number: 4 (lower is better)
Translates to: PIEEGVRTDLLKCPSVCVTPACP*PEAYTD
Trigger: ATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGT...TACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCCTCGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTATTCATCTCCCCCGCTaGTCAGCTCCTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSIHLPR*SAPAGC
Trigger: GCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAAT...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACACAAAACATCCACAGTaGCCTTGGCCAATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHTKHPQ*PWPMRG
Trigger: GCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGT...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGGCTCAACCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SSGDMFRTLSEKEATSSWLNQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGGTTGAG...CCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583737.5
CDS-3UTR CCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCTATCCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPYPLGS*CQARQW
Trigger: CCATTGACGAGCTTGGCACCAACTACCCAAAGGATA...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGAWTDPVHSAWLPCCLLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...CAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: SGHWAARSFQVLGWPLRSPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLAEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGCGGGCACCAAAGGACTaGGGCAGCCCTGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PSGNWLDFKSLPGCVQKVRAPKD*GSPGQA
Trigger: CGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG...CACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCTTTTCACAGTCCCTCTaGGGCATGAGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSFSQSL*GMSGEQ
Trigger: CTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAA...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CAA 72 bp TGCCCAGAGGCATACACGGATAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CPEAYTDNNGDF*GHPSEQRPRPP
Trigger: TGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGGDRDNSWQGGCGGEDILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...ATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HWDSRIPLALSLLSICNSCPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...GCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCTGCCCACAGCAGAGATaGCGGTGGTCTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESCPQQR*RWSWSR
Trigger: GCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCA...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCAAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACAGTAGGTCCCAGTCCTaGAATATACAAAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDSRSQS*NIQSGA
Trigger: GGCGCCACTTTGTATATTTCAGGACTGGGACCTACT...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGATCTTCCGCGTAAACTaGGAGAGACGACAGAACATT +
Preference number: 4 (lower is better)
Translates to: ALVVTVTTAGRVAVVVRMIFRVN*ERRQNI
Trigger: AATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT...CATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCACAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp TCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCCAAGGCAGGTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SQEQGLPVNNELPPRQGRSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...CCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTGCCTGGCTCCCGTGCTaGCTGTCCTTCCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLGYRCHWDSRIPLALSLAWLPC*LSFHLE
Trigger: TTCCAGATGGAAGGACAGGCAGCACGGGAGCCAGGC...AAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCTGCCTGCAAACAGAATaGAGGAGAGGCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSCLQTE*RRGQCI
Trigger: GATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCA...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATCAGCTCCTGCTGGCTaGGCTCACCGGGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEISAPAG*AHRAPK
Trigger: CTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGA...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TTCACAGCCTGGCTTCCTTCTTTTGACACACAGCCCTTCCGCTCCAGTGGAGAAGTGCTGCCCAGGGGCTaGTGTGGGGCAGAGATAACA +
Preference number: 4 (lower is better)
Translates to: FTAWLPSFDTQPFRSSGEVLPRG*CGAEIT
Trigger: TGTTATCTCTGCCCCACAGCAGCCCCTGGGCAGCAC...TTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGTCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALVVTVTTAGRVAVVVRMSISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...CATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGACCGTGACAACAGCTaGCAGGGTGGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SFQVLGWPLRSLLGLLHNDRDNS*QGGCGG
Trigger: ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTC...ATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IWGVGPSPEIYKVAPPTGLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...CCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGAAGCTCCTCTCAGGTaGCATCTGGGGAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSEAPLR*HLGSRS
Trigger: GGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCAGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SGHWAARSFQVLGWPLRSACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp ATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: IPLALSLLSICNSCAGSGTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...ACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAGCGGCAGACCCCAGGTaGTGCGTGGACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: AGEASASEMPRGKNTALLAADPR*CVDRPC
Trigger: ACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCGATCAAGGCGGCAGATaGGGCATACGTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESDQGGR*GIRGAR
Trigger: CCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATC...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCAGAACTGGCTGGGTTTTaGGATCAAGGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPELAGF*DQGGRW
Trigger: CCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTC...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTAGAGGAAGGGTGGGGTaGCAGGAGCCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALRGRVG*QEPSQE
Trigger: CTCCTGGGAGGGCTCCTGCCACCCCACCCTTCCTCT...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGGAGCCCAGTGGCCACTaGTGCTGCCCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSGNWLDFKSLPGCVQKVEPSGH*CCPGAA
Trigger: AGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTC...CACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCATCCACAGTGCCCTTaGCCAATGAGGGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPHPQCP*PMRGRH
Trigger: ATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATG...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATCAATTTTCTGGGCCTTaGCTAGGGTTCCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: GAGGDRDNSWQGGCGGEDQFSGP*LGFRNS
Trigger: AGAATTTCGGAACCCTAGCCAAGGCCCAGAAAATTG...ATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542343.5
CDS-3UTR CCA 90 bp GAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTACAGGGCCGCCCTGCTaGAGCAGCACCACGGGACAT +
Preference number: 4 (lower is better)
Translates to: EATTGPVGLHRKGYVLFSTGPPC*SSTTGH
Trigger: ATGTCCCGTGGTGCTGCTCCAGCAGGGCGGCCCTGT...AGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
3UTR CAA 72 bp AAGCAACACGGCCCTTCACAGCCTGGCTTCCTTCTTTaGACACACAGCCCTTCCGCTCCAGTGGAGAATCGC +
Preference number: 4 (lower is better)
Translates to: KQHGPSQPGFLL*THSPSAPVENR
Trigger: GCGATTCTCCACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAAGGGCCGTGTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
3UTR CAA 72 bp GTGGTGGTGGACGTGGCGTTGGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCAATCTGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VVVDVALVVVPF*VPVTNSIWRGR
Trigger: TCTCCCTCTCCAGATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCCACGTCCACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR TCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTGGAAACTGGCTTaGCTTCAAAAGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDFWKLA*LQKPSW
Trigger: CCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAA...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CCACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCAATCGCCAAAGATCATaGAGGGTAAATAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLGSGHWAARSFQVLGWPNRQRS*RVNSLL
Trigger: GAGGAGACTATTTACCCTTCATGATCTTTGGCGATT...GGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACAGTGCCCTTGGCCAATaGGGGGCCGCCATCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANSALGQ*GAAIGG
Trigger: ACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACT...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: AGGDRDNSWQGGCGGEDGRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...ACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTATCTTCCGCGTAAACTaGGAGAGACGACAGAACATT +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPIFRVN*ERRQNI
Trigger: AATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCAGTGGTCACTGGGCTaGACGGTCCTTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTQWSLG*TVLSSP
Trigger: AGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGAGCGCCTGGCTCCCGTaGTGCCTGTCCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLSAWLP*CLSFHL
Trigger: CAGATGGAAGGACAGGCAGCACGGGAGCCAGGCGCT...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACCGCCTCCCCACTCTCTaGACAGGTCAGGATCTCACC +
Preference number: 4 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHRLPTL*TGQDLT
Trigger: GGTGAGATCCTGACCTGTGCAGAGAGTGGGGAGGCG...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACACCTTTCTAAACCTCTaGCCACCCACTGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDTFLNL*PPTESN
Trigger: GTTGCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGT...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCAACAAAACATCCACAGTaGCCTTGGCCAATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPTKHPQ*PWPMRG
Trigger: GCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGT...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATCGTCATCTTCCGACTGTCTACTCAACCAGCCGCGCTaGCCACCGCCTCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSASGFSVSESSSSDCLLNQPR*PPPRFQ
Trigger: CTGGAATCGAGGCGGTGGGCAGCGCGGCTGGTTGAG...TAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583170.5
ENST00000583737.5
CDS-3UTR CCA 90 bp TCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFQVLGWPLRSLLGLLHNEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...ATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCATATCCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: SGHWAARSFQVLGWPLRSYPLGS*CQARQW
Trigger: CCATTGACGAGCTTGGCACCAACTACCCAAAGGATA...TGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CCA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACATATCCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTYPLGS*CQARQW
Trigger: CCATTGACGAGCTTGGCACCAACTACCCAAAGGATA...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGTCCTCAGACCAGCCATaGGGATCAAACATATCCTTT +
Preference number: 4 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVSSDQP*GSNISF
Trigger: AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGA...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: PTLCTGQDLTPALLETGLGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCGTGAGGATGGTGGGCTaGGCTATCGTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SRIPLALSLLSICNSCAGVRMVG*AIVVTG
Trigger: CCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: CTVLSSPRVAPQVTAWPSLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...AGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGACTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLLSICNSCAGSGSGGGLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...TCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGACCCCAGGTGGTGCGTaGACAGACCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLTPGGA*TDPVHS
Trigger: GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGATCAAGGCGGCAGATaGGGCATACGTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALDQGGR*GIRGAR
Trigger: CCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCACCCGAGAACTGGCTaGGTTTTGGGATCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRHPRTG*VLGSRR
Trigger: CCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTG...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCGGGGACTCCCGCCTGTCCATGCCCAGAGGCATACACGGATAACAACGGTGACAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: SGTPACPCPEAYTDNNGDKSDLV*GVLKCT
Trigger: AGTGCACTTGAGCACTCCCCAGACCAGATCACTTTT...GTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTGCCCTTCCGCTCCAGTaGAGAATCGCCAAAGATCAT +
Preference number: 4 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLAALPLQ*RIAKDH
Trigger: ATGATCTTTGGCGATTCTCCACTGGAGCGGAAGGGC...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp TGTCACTGTGCCGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCGAGCTTGCTGAGCCCTaGGTGCCTCTGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CHCAELLLWVISLRFFSLELAEP*VPLSLC
Trigger: GCACAGTGACAGAGGCACCCAGGGCTCAGCAAGCTC...GAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCACAGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR TCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPIRLGL*IFRVNC
Trigger: GCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGAT...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCGGGTGGCTGTGGTGGTaGGGATGGTGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVIGWLWW*GWWAGL
Trigger: TAGCCCAGCCCACCATCCTCACCACCACAGCCACCC...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGGTGTGTCCAAAAAGTaGTCTGGTCTGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSGVSKK*SGLGSA
Trigger: AGCACTCCCCAGACCAGATCACTTTTTGGACACACC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACCGCCAAGGCAGGAGGTaGTTCATCTCCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANRQGRR*FISPAA
Trigger: AGCAGCGGGGGAGATGAATCACCTCCTGCCTTGGCG...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CACTGGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTGTCTCTGCTGCTTAGGACTTCACTaGAGGCAAGACAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HWPSRAAQKRLRSFLCLCCLGLH*RQDRAA
Trigger: GGCGGCCCTGTCTTGCCTTCAGTGAAGTCCTAAGCA...GCAGAGACAGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCCCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 4 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTTGCCTGCAAACAGAATaGAGGAGAGGCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSCLQTE*RRGQCI
Trigger: GATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCA...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTCGCCTCCCCACTCTCTaGACAGGTCAGGATCTCACC +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALRLPTL*TGQDLT
Trigger: GGTGAGATCCTGACCTGTGCAGAGAGTGGGGAGGCG...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTCTGCCCTTTCCACGGTaGCATGCTGCCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: IPLALSLLSICNSCAGSGLPFPR*HAASHK
Trigger: TTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAG...ACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp GCTTCTGGATCTTGTCTTGCAAGTGATTTGAACATCTGCCAGGGGGTTCTGGCGGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASGSCLASDLNICQGVLAEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...CGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACATCTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: TSARGFWRDLDFIRRHVPSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...CGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR CCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCATGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPCQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGATCAAACATATCCTTTaGGTAGTTGGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWIKHIL*VVGAKL
Trigger: GAGCTTGGCACCAACTACCCAAAGGATATGTTTGAT...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CCA 90 bp GGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAGGDRDNSWQGGCGGEDLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...ATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGACGTCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: SLLSICNSCAGSGSGGGRPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GGTAAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: GKNTALLIGGRPQVVRGQPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...CTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLAACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAAGACTATTGAGTCTTaGGGGACATGTGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHKTIES*GTCELK
Trigger: CTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTT...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTACAACGGTGACTTCTTaGGTCACCCCTCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPTTVTS*VTPLNS
Trigger: GCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTACAACGGTGACTTCTTaGGTCACCCCTCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: VHAQRHTRITTVTSWVTPTTVTS*VTPLNS
Trigger: GCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT...AGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCTTCAAAAGCCTTCCTaGGTGTGTCCAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPLQKPS*VCPKSD
Trigger: ATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAG...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTTCTGAACCCCTGGTCTaGGAAACCCGTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRSEPLV*ETRFNP
Trigger: GGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGA...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCTGGGGGACAGGAGCTTaGCACTACACAAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTWGTGA*HYTKEA
Trigger: TGCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCA...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000580322.5
3UTR CAA 72 bp GTGGTGGTGGACGTGGCGTTGGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCAATTTTTGTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: VVVDVALVVVPF*VPVTNSIFVRS
Trigger: GGAGCGAACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCCACGTCCACCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542343.5
ENST00000582022.5
CDS-3UTR TCA 90 bp TCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGACGTGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SLLSICNSCAGSGSGGGRVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAATCGCCAAAGATCATaGAGGGTAAATAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHNRQRS*RVNSLL
Trigger: GAGGAGACTATTTACCCTTCATGATCTTTGGCGATT...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACGGAAGGGGTGAGAACTaGCCTCCTGAAGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANGRGEN*PPEVPE
Trigger: CTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCC...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCAACTCCTGAGATGAGGCTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PTPEMRLTGGKVDCGILPSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...GGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAGCCTCATCTCAGGAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp TCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SFQVLGWPLRSLLGLLHNSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...ATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GTCAGCTCCTGGGGGACAGGAGCTTGGCACTACACAAAAGAGGCATTGGAAATGCCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VSSWGTGAWHYTKEALEMPLGSW*QARQWH
Trigger: GTGCCATTGACGAGCTTGGCACCAACTACCCAAAGG...CATTTCCAATGCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCAGGAGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR GCA 90 bp TGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTGCACTCAAGGGATCTGGTCTGGGGAGTaGTCAAGTGCACTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: WVCPKSDLVWGVLKCTQGIWSGE*SSALKG
Trigger: TCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGAT...CCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAATCTGGTCTGGGGAGTaGTCAAGTGCACTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQIWSGE*SSALKG
Trigger: TCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGAT...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AACAGCGTCCCAGGCCTCCATCACCCTGTTGTCAACCCTGAGGCAATAGTCCCAACCTTTCTAAACCTCTaGCCACCCACTGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: NSVPGLHHPVVNPEAIVPTFLNL*PPTESN
Trigger: GTTGCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGT...TGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGATCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LSLLSICNSCAGSGSGGGSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...TCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCTGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTCQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGCTVLSSPRVAPQVTAWLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...CCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTACTGGGCAGTGGTCACTaGGCTGCACGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AGEASASEMPRGKNTALLLGSGH*AARSFQ
Trigger: TTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAG...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTCTCTCAGGTGGCATCTaGGGAGTAGGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALLSGGI*GVGPSP
Trigger: AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAG...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTACAACGGTGACTTCTTaGGTCACCCCTCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRTTVTS*VTPLNS
Trigger: GCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCATCACCCGAGAACTaGCTGGGTTTTGGGATCAAG +
Preference number: 4 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPPSPEN*LGFGIK
Trigger: CTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTTCTCCTCTGAACCCCTaGTCTGGGAAACCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: EAYTDNNGDFLGHPSEQRSPLNP*SGKPVS
Trigger: TGAAACGGGTTTCCCAGACCAGGGGTTCAGAGGAGA...ACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCTTTTCACAGTCCCTCTaGGGCATGAGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESFSQSL*GMSGEQ
Trigger: CTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAA...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCTTTTCACAGTCCCTCTaGGGCATGAGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RCHWDSRIPLALSLLSICFSQSL*GMSGEQ
Trigger: CTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAA...GCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CCA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATCGTCATCTTCCGACTGTCTACCCACAGCCCGGGCGTaGCTCACTCCTATGACTCAA +
Preference number: 4 (lower is better)
Translates to: GSSASGFSVSESSSSDCLPTARA*LTPMTQ
Trigger: TTGAGTCATAGGAGTGAGCCACGCCCGGGCTGTGGG...TAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR TCA 90 bp CACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: HWDSRIPLALSLLSICNSIRLGL*IFRVNC
Trigger: GCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGAT...GCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESIRLGL*IFRVNC
Trigger: GCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGAT...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp CCACGTCTACTGCCCTTTCCACGGTGCCATGCTGCCTCCCACAAAACATCCACAATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRLLPFPRCHAASHKTSTILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...TGTGGATGTTTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAGTAGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATACCCTGTTGTCAACCCTaGGGCAATAGTCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEIPCCQP*GNSPNQ
Trigger: TTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGG...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGTAAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGTTCTGGAAACTGGCTTaGCTTCAAAAGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKNTALLIGGRPQVVRGQFWKLA*LQKPSW
Trigger: CCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAA...CTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTGCACTCAAGGGGTAAATAGTCTCCTCTaGACCCCTGGTCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: WVCPKSDLVWGVLKCTQGVNSLL*TPGLGN
Trigger: GTTTCCCAGACCAGGGGTTCAGAGGAGACTATTTAC...CCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCGGAAGGGGTGAGAACTaGCCTCCTGAAGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVIGRGEN*PPEVPE
Trigger: CTCGGGCACTTCAGGAGGTCAGTTCTCACCCCTTCC...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACGACGCTTTATTACTGTaGTTTCAGAGAAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHDALLL*FQRRNR
Trigger: CCTGTTTCTTCTCTGAAATCACAGTAATAAAGCGTC...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GTGAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: VRMVGWAIVVTGIAESHLRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...CAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACATCTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAGGTTTTTCAGTCTCTaGATCGTCATCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TSARGFWRDLDFIRRHVPRFFSL*IVIFQP
Trigger: CGGCTGGAAGATGACGATTCAGAGACTGAAAAACCT...CGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR TCA 90 bp GAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTGTAGGAGCCAACTCCTaGGATGAGGCTAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: EATTGPVGLHRKGYVLFSVGANS*DEANRR
Trigger: CCTCCTGTTAGCCTCATCTCAGGAGTTGGCTCCTAC...AGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTGGGGTCTCGCTTTTCTaGTTCTGTATTATCCGACTG +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSGVSLF*FCIIRL
Trigger: CAGTCGGATAATACAGAAGCAGAAAAGCGAGACCCC...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000355423.7
CDS-3UTR GCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATAAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEISDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AGTTGGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCCCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: SWCQARQWHRTGSASRRCPLGSW*QARQWH
Trigger: GTGCCATTGACGAGCTTGGCACCAACTACCCAAAGG...GCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR GCA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCCCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESPLGSW*QARQWH
Trigger: GTGCCATTGACGAGCTTGGCACCAACTACCCAAAGG...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR GCA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRIPLALSLLSICNSCAGSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGTGGGGAGTGCTCAAGTaGACTCAAGGGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLWGVLK*TQGSTA
Trigger: AGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCA...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTACCTTTCTAAACCTCTaGCCACCCACTGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSTFLNL*PPTESN
Trigger: GTTGCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGT...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp ACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACATCAAACATATCCTTTaGGTAGTTGGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TTVTSWVTPLNSVPGLHHIKHIL*VVGAKL
Trigger: GAGCTTGGCACCAACTACCCAAAGGATATGTTTGAT...GTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp CCCACTCTCTGCACAGGTCAGGATCTCACCCCAGCCCTTCTGGAAACTGGCTTGATCAAACATATCCTTTaGGTAGTTGGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PTLCTGQDLTPALLETGLIKHIL*VVGAKL
Trigger: GAGCTTGGCACCAACTACCCAAAGGATATGTTTGAT...CAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACCCTCAGGTCACTGCTTaGCCTTCTTCACAATGGTGC +
Preference number: 4 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHPQVTA*PSSQWC
Trigger: GCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGG...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp TGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTGCACTCAAGGGCTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WVCPKSDLVWGVLKCTQGLKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...CCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SFQVLGWPLRSLLGLLHNACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...ATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACCACCCGAGAACTGGCTaGGTTTTGGGATCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANHPRTG*VLGSRR
Trigger: CCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTG...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCGTAAATAGTCTCCTCTaGACCCCTGGTCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RCHWDSRIPLALSLLSICVNSLL*TPGLGN
Trigger: GTTTCCCAGACCAGGGGTTCAGAGGAGACTATTTAC...GCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR TCA 90 bp GCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTAAGAGGCATTGGAAATaGACTCTGCTCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: ALSLLSICNSCAGSGSGGKRHWK*TLLCPS
Trigger: AGATGGGCAGAGCAGAGTTCATTTCCAATGCCTCTT...ACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR TCA 90 bp CTTCTTCTTCATAACCATCTTCATCACCCCCTAGACGAGAAAAGTCATCCTCCCCGTGGCTCACTCCTATaGCTCAAGACGCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: LLLHNHLHHPLDEKSHPPRGSLL*LKTPTS
Trigger: GGAAGTCGGCGTCTTGAGTCATAGGAGTGAGCCACG...GGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAGAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR GCA 90 bp ATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCCCACTGGGATCTTCCGCGTAAACTaGGAGAGACGACAGAACATT +
Preference number: 4 (lower is better)
Translates to: IWGVGPSPEIYKVAPPTGIFRVN*ERRQNI
Trigger: AATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT...CCCAGTGGGAGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp GTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTATCTTCCGCGTAAACTaGGAGAGACGACAGAACATT +
Preference number: 4 (lower is better)
Translates to: VHAQRHTRITTVTSWVTPIFRVN*ERRQNI
Trigger: AATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT...AGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTCAGGTAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: WGSRFSASVLSFGSSASGSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...ACCTGAGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR GCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAACCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 4 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGACTGACCTCCTGAAGTaGCCGAGTGTGTGTGTACGG +
Preference number: 4 (lower is better)
Translates to: PSGNWLDFKSLPGCVQKVTDLLK*PSVCVR
Trigger: CCGTACACACACACTCGGGCACTTCAGGAGGTCAGT...CACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTAGAGGCCACGAGTTCCTaGGGGTCTCGCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLEATSS*GSRFSA
Trigger: AGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTC...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CCA 90 bp GGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCAGATCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: GFWRDLDFIRRHVPNSFRSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...TCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR CCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHCQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp GCTTCTGGATCTTGTCTTGCAAGTGATTTGAACATCTGCCAGGGGGTTCTGGCGTGCCAAGCTCGTCAATaGCACAGAACTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ASGSCLASDLNICQGVLACQARQ*HRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCA...CGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp GGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCTAGGTATCCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: GAKLVNGTELDQLLVDARYPLGS*CQARQW
Trigger: CCATTGACGAGCTTGGCACCAACTACCCAAAGGATA...CCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp ACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TTVTSWVTPLNSVPGLHHLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...GTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATACTGAAATATACAAAGTaGCGCCTCCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEILKYTK*RLPLGS
Trigger: ACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCAG...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACGCCTGTCCTTCCATCTaGAATGCCAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHACPSI*NAKQKL
Trigger: GAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGC...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGTAAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGAAGACTATTGAGTCTTaGGGGACATGTGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GKNTALLIGGRPQVVRGQKTIES*GTCELK
Trigger: CTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTT...CTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTACTGAGAAGCTACCACTaGCCCAGTAGGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLLRSYH*PSRAAQ
Trigger: CTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAG...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR TCA 90 bp GGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTATAGAAGCCTCAGTCCCTGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: GLWDPSHLSVSFIEASVPVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...AGGGACTGAGGCTTCTATAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR TCA 90 bp GTTCCTGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: VPGGLAFLLLYYPLGHQPVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...AGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR TCA 90 bp TGCCTCATAGTAGGAGTCCTCAGACCAGCCATGGGGATCAAACATATCCTTTGGGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CLIVGVLRPAMGIKHILWVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...CCAAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR TCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGTCTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALVLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGAC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp GGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGYRCHWDSRIPLALSLILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...AAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR TCA 90 bp ACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGGGGGTCTCGCTATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TCSELFQKRRPRVPGGLAILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...AGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR TCA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAATCTTGTCTTGCAAGTaGTTTGAACATCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQILSCK*FEHLPG
Trigger: CCCTGGCAGATGTTCAAATCACTTGCAAGACAAGAT...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACGGTGTGTCCAAAAAGTaGTCTGGTCTGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANGVSKK*SGLGSA
Trigger: AGCACTCCCCAGACCAGATCACTTTTTGGACACACC...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGTTCTGGAAACTGGCTTaGCTTCAAAAGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLFWKLA*LQKPSW
Trigger: CCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAA...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR TCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTAATCGCCAAAGATCATaGAGGGTAAATAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSNRQRS*RVNSLL
Trigger: GAGGAGACTATTTACCCTTCATGATCTTTGGCGATT...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGGGGGTCTCGCTTTTCTaGTTCTGTATTATCCGACTG +
Preference number: 4 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLGVSLF*FCIIRL
Trigger: CAGTCGGATAATACAGAAGCAGAAAAGCGAGACCCC...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293208.13
CDS-3UTR GCA 90 bp GAAGAGAATAAGACCAGGCAAAGCTGGGTGTCCACAGCTTTTTGCCATCCGTCACTGCAGACACGTCCCTaGAACAAGCTTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: EENKTRQSWVSTAFCHPSLQTRP*NKLLFA
Trigger: AGCGAACAAAAGCTTGTTGCAGGGACGTGTCTGCAG...TGACGGATGGCAAAAAGCTGTGGACACCCAGCTTTGCCTGGTCTTATTCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR GCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALSLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEISFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp ATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTTCCTTCCATCTGGAATaGCAAACAGAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPLALSLLSICNSCAGSGSFHLE*QTEAPL
Trigger: GAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGA...ACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR GCA 90 bp CACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCCCAGTGCATCTGAGATaGCAAGAGGTAAGAATACGG +
Preference number: 4 (lower is better)
Translates to: HWDSRIPLALSLLSICNSPVHLR*QEVRIR
Trigger: CCGTATTCTTACCTCTTGGCATCTCAGATGCACTGG...GCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000582022.5
CDS-3UTR GCA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACACAAAACATCCACAGTaGCCTTGGCCAATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TKTIESWGTCELKHLPANTKHPQ*PWPMRG
Trigger: GCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGT...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GAACATCTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCTCCTCAGACCAGCCATaGGGATCAAACATATCCTTT +
Preference number: 4 (lower is better)
Translates to: EHLPGGSGGILISSGDMFSSDQP*GSNISF
Trigger: AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGA...GAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTGGCTATCGTTGTCACTaGGATAGCCGAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALGYRCH*DSRIPL
Trigger: AAGTGGGATTCGGCTATCCCAGTGACAACGATAGCC...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TGGGTGTGTCCAAAAAGTGATCTGGTCTGGGGAGTGCTCAAGTGCACTCAAGGGAAGACTATTGAGTCTTaGGGGACATGTGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WVCPKSDLVWGVLKCTQGKTIES*GTCELK
Trigger: CTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTT...CCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATAGTCCAAAAAGTGATCTaGTCTGGGGAGTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEIVQKVI*SGECSS
Trigger: ACTTGAGCACTCCCCAGACCAGATCACTTTTTGGAC...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCTTCAAAAGCCTTCCTaGGTGTGTCCAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSLQKPS*VCPKSD
Trigger: ATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAG...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp ATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: ISSGDMFRTLSEKEATSSVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...GGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR TCA 90 bp GGTAAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGGACGCTTTATTACTGTaGTTTCAGAGAAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: GKNTALLIGGRPQVVRGQDALLL*FQRRNR
Trigger: CCTGTTTCTTCTCTGAAATCACAGTAATAAAGCGTC...CTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp TGTCACTGTGCCGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: CHCAELLLWVISLRFFSLRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...GAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCACAGTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR GCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGAAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SASEMPRGKNTALLIGGRSDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCCTGCAGACACGTCCCTaGAACAAGCTTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: YRCHWDSRIPLALSLLSILQTRP*NKLLFA
Trigger: AGCGAACAAAAGCTTGTTGCAGGGACGTGTCTGCAG...GATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR GCA 90 bp GCAAAGCTCTTTCTGAGAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGAGTAGCCGAGTCTCATaGTTACTTGCAAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: AKLFLRSYHWPSRAAQKRSSRVS*LLASDL
Trigger: CAAATCACTTGCAAGTAAGCATGAGACTCGGCTACT...CCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAGAAAGAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp AGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCCATTATCTAACATTGTaGTTCTCAACCAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RGFWRDLDFIRRHVPNSFHYLTL*FSTSRA
Trigger: AGCGCGGCTGGTTGAGAAGCACAATGTTAGATAATG...GAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583737.5
CDS-3UTR CCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTATCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CCA 90 bp GTCAGCTCCTGGGGGACAGGAGCTTGGCACTACACAAAAGAGGCATTGGAAATGATCAAACATATCCTTTaGGTAGTTGGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VSSWGTGAWHYTKEALEMIKHIL*VVGAKL
Trigger: GAGCTTGGCACCAACTACCCAAAGGATATGTTTGAT...CATTTCCAATGCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCAGGAGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR CCA 90 bp AGAATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTCCTCAGACCAGCCATaGGGATCAAACATATCCTTT +
Preference number: 4 (lower is better)
Translates to: RMQERPVHLRCQEVRIRHSSDQP*GSNISF
Trigger: AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGA...GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp GTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VHAQRHTRITTVTSWVTPFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...AGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCTGGGGGTCTCGTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RHVPNSFRKGGHEFLGVSFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...CGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR CCA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CTTCTTCTTCATAACCATCTTCATCACCCCCTAGACGAGAAAAGTCATCCTCCCGCCGAGCTTCTCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLLHNHLHHPLDEKSHPPAELLL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGC...GGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR TCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGAGTTCTGGCGGGATCTTaGTTTCATCAGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: SASEMPRGKNTALLIGGRVLAGS*FHQATC
Trigger: ACATGTCGCCTGATGAAATCAAGATCCCGCCAGAAC...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGAGTAAATAGTCTCCTCTaGACCCCTGGTCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SASEMPRGKNTALLIGGRVNSLL*TPGLGN
Trigger: GTTTCCCAGACCAGGGGTTCAGAGGAGACTATTTAC...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCTCTCTTCTGAGCATCTaGAACAGCTGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVISLLSI*NSCAGS
Trigger: ACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR GCA 90 bp AGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTGTCTCAGTCCCTTTCCCTaGCATGGTCTCTTAAGATTA +
Preference number: 4 (lower is better)
Translates to: SYHWPSRAAQKRLRSFLCLSPFP*HGLLRL
Trigger: TAATCTTAAGAGACCATGGCAGGGAAAGGGACTGAG...ACAGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp CTGTGCCGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATCATTATCTAACATTGTaGTTCTCAACCAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LCRASPLGHQPQVFQSLNHYLTL*FSTSRA
Trigger: AGCGCGGCTGGTTGAGAAGCACAATGTTAGATAATG...ATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR CCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGTCCTCAGACCAGCCATaGGGATCAAACATATCCTTT +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLSSDQP*GSNISF
Trigger: AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGA...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR TCA 90 bp ATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: ISSGDMFRTLSEKEATSSRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...GGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583737.5
CDS-3UTR TCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTATACTTGCAAGTGATTTaGACATCTGCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLYLQVI*TSARGF
Trigger: GAACCCCCTGGCAGATGTTCAAATCACTTGCAAGTA...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp ATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGAGGCCACGAGTTCCATCTTCCGCGTAAACTaGGAGAGACGACAGAACATT +
Preference number: 4 (lower is better)
Translates to: ISSGDMFRTLSEKEATSSIFRVN*ERRQNI
Trigger: AATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT...GGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS-3UTR GCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACACTGCCCTTTCCACGGTaGCATGCTGCCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: VLPNHLTTLYYCDFREETLPFPR*HAASHK
Trigger: TTTGTGGGAGGCAGCATGGCACCGTGGAAAGGGCAG...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCCTGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTCAATCAAACATATCCTTTaGGTAGTTGGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SWGSRFSASVLSFGSSASIKHIL*VVGAKL
Trigger: GAGCTTGGCACCAACTACCCAAAGGATATGTTTGAT...TGAGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGAAAAAGTGATCTGGTCTaGGGAGTGCTCAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: SASEMPRGKNTALLIGGRKSDLV*GVLKCT
Trigger: AGTGCACTTGAGCACTCCCCAGACCAGATCACTTTT...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCGTCCAAAAAGTGATCTaGTCTGGGGAGTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVIVQKVI*SGECSS
Trigger: ACTTGAGCACTCCCCAGACCAGATCACTTTTTGGAC...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AGTTGGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SWCQARQWHRTGSASRRCFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...GCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEIFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR TCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTAAGGTTTTTCAGTCTCTaGATCGTCATCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLRFFSL*IVIFRL
Trigger: CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCT...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CCA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCTCTGCCAGGGGGTTCTaGCGGGATCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPSARGF*RDLDFI
Trigger: GATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGA...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGATCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: WRDLDFIRRHVPNSFRKGSISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...TCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CCA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCTCCATCTCAATTTTCTaGGCCTTGGCTAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVISISIF*ALANAS
Trigger: TGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGA...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp AATGCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NAGEASASEMPRGKNTALLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...AAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp CAGGTCCCACAAGAGTACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGTTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVPQEYQVPFQNHLSKPLLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...CAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp GGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTATAGAAGCCTCAGTCCCTTTCTGTATTATCCTTTaGGTCATCAGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GLWDPSHLSVSFIEASVPFCIIL*VISLRF
Trigger: AAACCTGAGGCTGATGACCCAAAGGATAATACAGAA...AGGGACTGAGGCTTCTATAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CCA 90 bp CTAACAGGAGGTAAAGTGGACTGTGGGATCCTTCCCACCTGTCAGTTTCTTTTATCCCTTTCCCTGCCATaGTCTCTTAAGATTAAGACC +
Preference number: 4 (lower is better)
Translates to: LTGGKVDCGILPTCQFLLSLSLP*SLKIKT
Trigger: GGTCTTAATCTTAAGAGACCATGGCAGGGAAAGGGA...TAAAAGAAACTGACAGGTGGGAAGGATCCCACAGTCCACTTTACCTCCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR GCA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACACCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VLPNHLTTLYYCDFREETPLGSW*QARQWH
Trigger: GTGCCATTGACGAGCTTGGCACCAACTACCCAAAGG...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355423.7
ENST00000584667.6
CDS-3UTR CCA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGACTTCAAAAGCCTTCCTaGGTGTGTCCAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SASEMPRGKNTALLIGGRLQKPS*VCPKSD
Trigger: ATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAG...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CCA 90 bp TGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTTCAGAAAAGGATTGTTCGCTCCTTTTTaGCCTTTTCCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WRDLDFIRRHVPNSFRKGLFAPF*PFPICP
Trigger: TGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAA...TCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR TCA 90 bp CCTTTGGATAATGTAGTTCATATCCATTCCCTCCTTTATCTTTCGTTCATAAAGATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: PLDNVVHIHSLLYLSFIKIRLGL*IFRVNC
Trigger: GCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGAT...CTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR GCA 90 bp CTTCCTTTGGATAATGTAGTTCATATCCATTCCCTCCTTTATCTTTCGTTCATAAGTGATTTGAACATCTaGCAGGGGGTTCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LPLDNVVHIHSLLYLSFISDLNI*QGVLAG
Trigger: TCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACT...TATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR TCA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCGACGCTTTATTACTGTaGTTTCAGAGAAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPDALLL*FQRRNR
Trigger: CCTGTTTCTTCTCTGAAATCACAGTAATAAAGCGTC...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CGGGCACCAAAGGACTGGGGCAGCCCTGGCCAGGCGCTGACGCCTCCCCACTCTGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RAPKDWGSPGQALTPPHSEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...AGAGTGGGGAGGCGTCAGCGCCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp ACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCACATCCACAGTGCCCTaGGCCAATGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: TPGGAWTDPVHSAWLPCCTSTVP*ANEGPP
Trigger: TGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT...GCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS TCA 90 bp CCCTCTGCTTGGGGTGAGGGAAGCGGTCTGGAGGCCGCAGCTGCTTaGGGATGGTCAGGCCGAGCCAGAAGTGGGAGGAGCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PSAWGEGSGLEAAAA*GWSGRARSGRSWCP
Trigger: AGGACACCAGCTCCTCCCACTTCTGGCTCGGCCTGACCATCCTCAAGCAGCTGCGGCCTCCAGACCGCTTCCCTCACCCCAAGCAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS-3UTR CAA 90 bp AATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGACATCCACAGTGCCCTaGGCCAATGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: NRRQTPGGAWTDPVHSAWTSTVP*ANEGPP
Trigger: TGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT...CCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS GCA 90 bp CAGGCCAGGCTGCTTAGCAACCCATCTCTTCGAGCCACTGCCCCCTaGCAATCAGGTGGGCAAAGAGGAGGCTGGGAGCAGGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: QARLLSNPSLRATAP*QSGGQRGGWEQAGR
Trigger: CCTCCCTGCCTGCTCCCAGCCTCCTCTTTGCCCACCTGATTGGCAGGGGGCAGTGGCTCGAAGAGATGGGTTGCTAAGCAGCCTGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS-3UTR CAA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS TCA 90 bp AGGGCCCTAACGTGGGACCTAATAGGTAGCACCCAGGCGAGCCACTaGGGGCAGCTCTGGAGGCCAAGACACTCACCGAGCAGCGCAAGC +
Preference number: 5 (lower is better)
Translates to: RALTWDLIGSTQASH*GQLWRPRHSPSSAS
Trigger: GCTTGCGCTGCTCGGTGAGTGTCTTGGCCTCCAGAGCTGCCCTCAGTGGCTCGCCTGGGTGCTACCTATTAGGTCCCACGTTAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS-3UTR CAA 90 bp GCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCCCCTGCAACAAGCTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AADPRWCVDRPCPQRLAPPCNKL*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAGCTTGTTGCAGGG...GGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CAA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp CAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCCGTGCTGCCTGTAGAACTGGCTGGGTTTaGGGATCAAGGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: QVVRGQTLSTAPGSRAACRTGWV*GSRRQM
Trigger: CATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTCT...ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACCATGCCCAGAACCGTTaGGCCAGGCCCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GTFNRRQTPGGAWTDPVHHAQNR*ARPLLL
Trigger: GAGGAGGAGGGGCCTGGCCAAACGGTTCTGGGCATG...GTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS TCA 90 bp GCCAACTGGGCAACGTATACCCTGCCTGTTGCTCTCCCCTGGGTCTaGGGAAGCTTGCCTGAATGGAGTGCAGAGCTCAAGGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: ANWATYTLPVALPWV*GSLPEWSAELKGPA
Trigger: GGCCGGGCCCTTGAGCTCTGCACTCCATTCAGGCAAGCTTCCTCAGACCCAGGGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS TCA 90 bp TTCCCCGCCATCTTATTCCCACAGCCCGGGCGTGGCTCACTCCTATaGCTCAAGACGCCGACTTCCGGGCGGAAAGGCAGGTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: FPAILFPQPGRGSLL*LKTPTSGRKGRFFR
Trigger: CCGAAAGAACCTGCCTTTCCGCCCGGAAGTCGGCGTCTTGAGTCATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGATGGCGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS TCA 90 bp GTATACCCTGCCTGTTGCTCTCCCCTGGGTCTGAGGAAGCTTGCCTaGATGGAGTGCAGAGCTCAAGGGCCCGGCCAGCCCAGACATCAC +
Preference number: 5 (lower is better)
Translates to: VYPACCSPLGLRKLA*MECRAQGPGQPRHH
Trigger: GTGATGTCTGGGCTGGCCGGGCCCTTGAGCTCTGCACTCCATTCAGGCAAGCTTCCTCAGACCCAGGGGAGAGCAACAGGCAGGGTATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 90 bp ACAAGCAAAGGACCCTGGGTGTCCCCATCACCCTCCAGCCCCGTGTaGCAGACGCACCTTTGGGTAGTTGGTGCCAAGCTCGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: TSKGPWVSPSPSSPV*QTHLWVVGAKLVNG
Trigger: GCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTGGAGGGTGATGGGGACACCCAGGGTCCTTTGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 90 bp TTCGAGGACAGGTGCAGAGCTCCGCAGGCTCCACTTACACAGACATaGCACACCACGCCACGGCTCCAAAAGGAAGGTGCCAGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: FEDRCRAPQAPLTQT*HTTPRLQKEGARKA
Trigger: GGCCTTCCTGGCACCTTCCTTTTGGAGCCGTGGCGTGGTGTGCCATGTCTGTGTAAGTGGAGCCTGCGGAGCTCTGCACCTGTCCTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp CCGTGCCACCACGTGGACCTTTCTGTGGCTGCAGGTCAAATCCCATaGAACAAGCAAAGGACCCTGGGTGTCCCCATCACCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PCHHVDLSVAAGQIP*NKQRTLGVPITLQP
Trigger: GGGCTGGAGGGTGATGGGGACACCCAGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS-3UTR CAA 90 bp GCCGCTGGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTTCCCAACCAAGACTATaGAGTCTTGGGGGACATGTG +
Preference number: 5 (lower is better)
Translates to: AAGAGGDRDNSWQGGCGGSQPRL*SLGGHV
Trigger: CACATGTCCCCCAAGACTCAATAGTCTTGGTTGGGA...ACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS-3UTR CAA 90 bp AGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTGGCTCCTTCTGGAAACTGGCTaGACTTCAAAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RRQTPGGAWTDPVHSAWLLLETG*TSKAFL
Trigger: CAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAG...GAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS TCA 90 bp GATGCTCCCGAGCCCCACGCCGGTCTCTCCTCCATGCCTTTTCAGTaGCCAAACCCACCATCGCTGAGGAGAACACAAGCCAGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: DAPEPHAGLSSMPFQ*PNPPSLRRTQASKP
Trigger: AGGCTTGCTGGCTTGTGTTCTCCTCAGCGATGGTGGGTTTGGTCACTGAAAAGGCATGGAGGAGAGACCGGCGTGGGGCTCGGGAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 90 bp CCTCTGAGTCCAACAAGCTGGGCCATGAGCTTGCTGAGCCCTGGGTaGCTCTGTCACTGTGCCGAGCTTCTCCTTTGGGTCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PLSPTSWAMSLLSPG*LCHCAELLLWVISL
Trigger: GAGGCTGATGACCCAAAGGAGAAGCTCGGCACAGTGACAGAGGCACCCAGGGCTCAGCAAGCTCATGGCCCAGCTTGTTGGACTCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578288.5
ENST00000578354.5
ENST00000583536.5
CDS GCA 90 bp GCAGCTATTCATTCAACCTGGCAGGGCACCACGTCCAGGCCAGGCTaGTTAGCAACCCATCTCTTCGAGCCACTGCCCCCTGCCAATCAG +
Preference number: 5 (lower is better)
Translates to: AAIHSTWQGTTSRPG*LATHLFEPLPPANQ
Trigger: CTGATTGGCAGGGGGCAGTGGCTCGAAGAGATGGGTTGCTAAGCAGCCTGGCCTGGACGTGGTGCCCTGCCAGGTTGAATGAATAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp TGTCTGTCGCCCAAACAAGCCAGGGAGACCCTGGCTCCATGTGTGTaGCAGGAGGCAGGGCAGCTCTGCAATCTACCTGCAACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: CLSPKQARETLAPCV*QEAGQLCNLPATAV
Trigger: CACAGCTGTTGCAGGTAGATTGCAGAGCTGCCCTGCCTCCTGCCACACACATGGAGCCAGGGTCTCCCTGGCTTGTTTGGGCGACAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS-3UTR CAA 90 bp CAGGAGCCCTCCCAGGAGCAGGGCTTGCCTGTAAACAATGAGCTGCCGCCTCGCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: QEPSQEQGLPVNNELPPRVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp TCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCAGTGGTAGTGGTGGTGGACGTGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLLSICNSCAGSGSGGGREMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp TGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCAGAACTGGCTGGGTTTaGGGATCAAGGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: WAARSFQVLGWPLRSLLGRTGWV*GSRRQM
Trigger: CATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTCT...GCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS TCA 90 bp GTGCCGGCGCTGAGCAGGCACAAGTCCACGTCCCTGCATGGGACCTaGACCATCCAGCTCCTGGGGCTGACACAAAACCTTCACAACTTT +
Preference number: 5 (lower is better)
Translates to: VPALSRHKSTSLHGT*TIQLLGLTQNLHNF
Trigger: AAAGTTGTGAAGGTTTTGTGTCAGCCCCAGGAGCTGGATGGTTCAGGTCCCATGCAGGGACGTGGACTTGTGCCTGCTCAGCGCCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579864.5
CDS GCA 90 bp CACAAGCCAGCAAGCCTGCTGCAGCCAACTGGGCAACGTATACCCTaGCTGTTGCTCTCCCCTGGGTCTGAGGAAGCTTGCCTGAATGGA +
Preference number: 5 (lower is better)
Translates to: HKPASLLQPTGQRIP*LLLSPGSEEACLNG
Trigger: TCCATTCAGGCAAGCTTCCTCAGACCCAGGGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 90 bp ACCAAACCCACCATCGCTGAGGAGAACACAAGCCAGCAAGCCTGCTaGAGCCAACTGGGCAACGTATACCCTGCCTGTTGCTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TKPTIAEENTSQQAC*SQLGNVYPACCSPL
Trigger: CAGGGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTGTTCTCCTCAGCGATGGTGGGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 90 bp GTGACCAAACCCACCATCGCTGAGGAGAACACAAGCCAGCAAGCCTaGTGCAGCCAACTGGGCAACGTATACCCTGCCTGTTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VTKPTIAEENTSQQA*CSQLGNVYPACCSP
Trigger: GGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTGTTCTCCTCAGCGATGGTGGGTTTGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 90 bp AAGAACAGTGCCGGCGCTGAGCAGGCACAAGTCCACGTCCCTGCATaGGACCTGAACCATCCAGCTCCTGGGGCTGACACAAAACCTTCA +
Preference number: 5 (lower is better)
Translates to: KNSAGAEQAQVHVPA*DLNHPAPGADTKPS
Trigger: TGAAGGTTTTGTGTCAGCCCCAGGAGCTGGATGGTTCAGGTCCCATGCAGGGACGTGGACTTGTGCCTGCTCAGCGCCGGCACTGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579864.5
CDS CCA 90 bp CCCATCACCCTCCAGCCCCGTGTGCCAGACGCACCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGT +
Preference number: 5 (lower is better)
Translates to: PITLQPRVPDAPLGS*CQARQWHRTGSASR
Trigger: ACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTGGAGGGTGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 90 bp CAGAACATTCTTCTTCCCCGCCATCTTATTCCCACAGCCCGGGCGTaGCTCACTCCTATGACTCAAGACGCCGACTTCCGGGCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QNILLPRHLIPTARA*LTPMTQDADFRAER
Trigger: CCTTTCCGCCCGGAAGTCGGCGTCTTGAGTCATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGATGGCGGGGAAGAAGAATGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR CAA 90 bp ACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: TSTVPLANEGPPSEVTGSVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: GCTVLSSPRVAPQVTAWPVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...AGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp CAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: QWSLGCTVLSSPRVAPQVVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 5 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp GTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCACAGGAAGCCTTTTCACATCCCAGGAGCAGGGCTaGCCTGTAAACAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: VPLANEGPPSEVTGSLFTSQEQG*PVNNEL
Trigger: CAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA...TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS TCA 90 bp CCGGTCTCTCCTCCATGCCTTTTCAGTGACCAAACCCACCATCGCTaGGGAGAACACAAGCCAGCAAGCCTGCTGCAGCCAACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: PVSPPCLFSDQTHHR*GEHKPASLLQPTGQ
Trigger: TTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTGTTCTCCTCAGCGATGGTGGGTTTGGTCACTGAAAAGGCATGGAGGAGAGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 90 bp AAGGCTCCGCACCATACCACACCCACCCCTTCTCATGGACTCAACTaGAGAGGCCCAATCCCCACACAAGGAGTCTACCATGTCTACCCC +
Preference number: 5 (lower is better)
Translates to: KAPHHTTPTPSHGLN*RGPIPTQGVYHVYP
Trigger: GGGGTAGACATGGTAGACTCCTTGTGTGGGGATTGGGCCTCTGCAGTTGAGTCCATGAGAAGGGGTGGGTGTGGTATGGTGCGGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS GCA 90 bp CCTCCTGATGCTGGGACAGGCCAAATTCCCCATTCCTCAGAACACTaGAGCTATTCATTCAACCTGGCAGGGCACCACGTCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPDAGTGQIPHSSEH*SYSFNLAGHHVQAR
Trigger: CCTGGCCTGGACGTGGTGCCCTGCCAGGTTGAATGAATAGCTGCAGTGTTCTGAGGAATGGGGAATTTGGCCTGTCCCAGCATCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS GCA 90 bp CTGTGCTTTCAACGAGCCGTGCCACCACGTGGACCTTTCTGTGGCTaGAGGTCAAATCCCATGGAACAAGCAAAGGACCCTGGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LCFQRAVPPRGPFCG*RSNPMEQAKDPGCP
Trigger: GGGACACCCAGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 90 bp TTGGGGGCAGCCTGGACACCTTCTGGGCTCAGCCAGCAGGACCCATaGACTCCACATGTGCCTTTTTCATCTAGGAGGTCTGCCATCACT +
Preference number: 5 (lower is better)
Translates to: LGAAWTPSGLSQQDP*TPHVPFSSRRSAIT
Trigger: AGTGATGGCAGACCTCCTAGATGAAAAAGGCACATGTGGAGTGCATGGGTCCTGCTGGCTGAGCCCAGAAGGTGTCCAGGCTGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS CCA 90 bp GGGACTGTGCTTTCAACGAGCCGTGCCACCACGTGGACCTTTCTGTaGCTGCAGGTCAAATCCCATGGAACAAGCAAAGGACCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GTVLSTSRATTWTFL*LQVKSHGTSKGPWV
Trigger: CACCCAGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 90 bp CAGCTCTGGAGGCCAAGACACTCACCGAGCAGCGCAAGCTGGGCCTaGCACTCTCTTAGGGAACTATTTCCCTCCCTTCAGGCTACAAAG +
Preference number: 5 (lower is better)
Translates to: QLWRPRHSPSSASWA*HSLRELFPSLQATK
Trigger: CTTTGTAGCCTGAAGGGAGGGAAATAGTTCCCTAAGAGAGTGCCAGGCCCAGCTTGCGCTGCTCGGTGAGTGTCTTGGCCTCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS-3UTR CAA 90 bp GGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: GQWSLGCTVLSSPRVAPQCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...CTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp ACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCTCCCAGGAGCAGGGCTaGCCTGTAAACAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: TFNRRQTPGGAWTDPVHSSQEQG*PVNNEL
Trigger: CAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA...GCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCACATCCACAGTGCCCTaGGCCAATGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SRIPLALSLLSICNSCAGTSTVP*ANEGPP
Trigger: TGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGT...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582022.5
CDS TCA 90 bp AGTCCGCCATGTCCAGCAGGCACTCAGTGTAATGACAAGTCTGGGTaGTGGTTTGGGCTCTGGGCTTTTCCTCACCACCTCCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SPPCPAGTQCNDKSG*WFGLWAFPHHLLGD
Trigger: GTCCCCAAGGAGGTGGTGAGGAAAAGCCCAGAGCCCAAACCATCACCCAGACTTGTCATTACACTGAGTGCCTGCTGGACATGGCGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577292.5
CDS GCA 90 bp ACTTACACAGACATGGCACACCACGCCACGGCTCCAAAAGGAAGGTaGCAGGAAGGCCACCCAGTTCCCCACACTGAACCTAGACTCAGT +
Preference number: 5 (lower is better)
Translates to: TYTDMAHHATAPKGR*QEGHPVPHTEPRLS
Trigger: ACTGAGTCTAGGTTCAGTGTGGGGAACTGGGTGGCCTTCCTGGCACCTTCCTTTTGGAGCCGTGGCGTGGTGTGCCATGTCTGTGTAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS GCA 90 bp ATCACCCTCCAGCCCCGTGTGCCAGACGCACCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCACAGAACTGGATCAGCTTCTCGTAGA +
Preference number: 5 (lower is better)
Translates to: ITLQPRVPDAPLGSW*QARQWHRTGSASRR
Trigger: TCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTGGAGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS-3UTR CAA 90 bp TGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: WAARSFQVLGWPLRSLLGCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...GCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp GCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCCCTGCAACAAGCTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AARSFQVLGWPLRSLLGLPCNKL*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAGCTTGTTGCAGGG...AAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CAA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 5 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GGCGCTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: GAGGDRDNSWQGGCGGEDLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...ATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS GCA 90 bp CTTTTCCTGCTGATGAGTGAGGGAGGAGATGAGACAGGAAGACCCTaGAACAAGACCTTTTCGAGGACAGGTGCAGAGCTCCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LFLLMSEGGDETGRP*NKTFSRTGAELRRL
Trigger: GAGCCTGCGGAGCTCTGCACCTGTCCTCGAAAAGGTCTTGTTGCAGGGTCTTCCTGTCTCATCTCCTCCCTCACTCATCAGCAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp GCCAAATTCCCCATTCCTCAGAACACTGCAGCTATTCATTCAACCTaGCAGGGCACCACGTCCAGGCCAGGCTGCTTAGCAACCCATCTC +
Preference number: 5 (lower is better)
Translates to: AKFPIPQNTAAIHST*QGTTSRPGCLATHL
Trigger: GAGATGGGTTGCTAAGCAGCCTGGCCTGGACGTGGTGCCCTGCCAGGTTGAATGAATAGCTGCAGTGTTCTGAGGAATGGGGAATTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp GAATGGGGATCCCAGAGAGGCCCCAGGCTCAAGGAAGCCTCTCTCTaGCTCTCAGCTCCCTTTACACTGGCTTTATACTCCCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: EWGSQRGPRLKEASL*LSAPFTLALYSLQR
Trigger: TCTTTGGAGGGAGTATAAAGCCAGTGTAAAGGGAGCTGAGAGCCAGAGAGAGGCTTCCTTGAGCCTGGGGCCTCTCTGGGATCCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS-3UTR CAA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 5 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLAGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp CCCACAAAACATCCACAGTGCCCTTGGCCAATGAGGGGCCGCCATCGGAGGTCATGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: PTKHPQCPWPMRGRHRRSCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...TGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 5 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 5 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTTCCCAGGAGCAGGGCTaGCCTGTAAACAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: PCPEAYTDNNGDFLGHPSSQEQG*PVNNEL
Trigger: CAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGA...AGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CTGGTGGTGACCGTGACAACAGCTGGCAGGGTGGCTGTGGTGGTGAGGATGGTGCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LVVTVTTAGRVAVVVRMVLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...CACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGTCAATTTTCTGGGCCTaGGCTAGGGTTCCGAAATTC +
Preference number: 5 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQSIFWA*ARVPKF
Trigger: GAATTTCGGAACCCTAGCCAAGGCCCAGAAAATTGA...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542343.5
CDS GCA 90 bp AGGGACTCAAACAAAAGAGACAGGGACTGTGCTTTCAACGAGCCGTaGCACCACGTGGACCTTTCTGTGGCTGCAGGTCAAATCCCATGG +
Preference number: 5 (lower is better)
Translates to: RDSNKRDRDCAFNEP*HHVDLSVAAGQIPW
Trigger: CCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCCTGTCTCTTTTGTTTGAGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 90 bp GAGATTCAATCAAGGGTTAAGAATGAGAAACCCCAACTATCCCCTTaGACCAGCTCCCACGTTCCTGGCCCAGCAGCCAGCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EIQSRVKNEKPQLSP*TSSHVPGPAASTSR
Trigger: TCTGGAGGTGCTGGCTGCTGGGCCAGGAACGTGGGAGCTGGTGCAAGGGGATAGTTGGGGTTTCTCATTCTTAACCCTTGATTGAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS-3UTR CAA 90 bp AAGAATACGGCACTTTTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 5 (lower is better)
Translates to: KNTALLIGGRPQVVRGQTGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...GGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAG +
Preference number: 5 (lower is better)
Translates to: VHAQRHTRITTVTSWVTPNNGDF*GHPSEQ
Trigger: CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTT...AGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CCCAGCCCTTCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAACCTGGCTTCCTTCTTTaGACACACAGCCCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: PSPSGNWLDFKSLPGCVQPGFLL*THSPSA
Trigger: AGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGG...TTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp AGGGTGGCCCCTCAGGTCACTGCTTGGCCTTCTTCACAATGGTGCCCACAGCAGCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: RVAPQVTAWPSSQWCPQQLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...CTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp CGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCCTGGGGGACAGGAGCTaGGCACTACACAAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: RCHWDSRIPLALSLLSICLGDRS*ALHKRG
Trigger: GCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCAG...GCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR CAA 90 bp CTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGGGTGTCCACAGCTTTTaGCCATCCGTCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LGYRCHWDSRIPLALSLLGVHSF*PSVSSW
Trigger: CCAGGAGCTGACGGATGGCAAAAAGCTGTGGACACC...CAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS TCA 90 bp CTGAACCTAGACTCAGTCTTAGCCCCCTTTCCAGAAAGTCCCTCCTaGTGCTGGGACAGGCCAAATTCCCCATTCCTCAGAACACTGCAG +
Preference number: 5 (lower is better)
Translates to: LNLDSVLAPFPESPS*CWDRPNSPFLRTLQ
Trigger: CTGCAGTGTTCTGAGGAATGGGGAATTTGGCCTGTCCCAGCATCAGGAGGGACTTTCTGGAAAGGGGGCTAAGACTGAGTCTAGGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS TCA 90 bp AAGGGAACAAGGCCCAGAGATAACAGTTTGGTCTCCCAGCCAAACTaGTGCTCCCTGAAGAACCCAGACCACACTGCCAGGGAACAAGTG +
Preference number: 5 (lower is better)
Translates to: KGTRPRDNSLVSQPN*CSLKNPDHTAREQV
Trigger: CACTTGTTCCCTGGCAGTGTGGTCTGGGTTCTTCAGGGAGCATCAGTTTGGCTGGGAGACCAAACTGTTATCTCTGGGCCTTGTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS GCA 90 bp GGACACCTTCTGGGCTCAGCCAGCAGGACCCATGCACTCCACATGTaGCTTTTTCATCTAGGAGGTCTGCCATCACTTACTTTTGTTCGC +
Preference number: 5 (lower is better)
Translates to: GHLLGSASRTHALHM*LFHLGGLPSLTFVR
Trigger: GCGAACAAAAGTAAGTGATGGCAGACCTCCTAGATGAAAAAGGCACATGTGGAGTGCATGGGTCCTGCTGGCTGAGCCCAGAAGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS CCA 90 bp ACGGCTGAGTTTTGTCTCACTGACCTTCAGTCTGCACAGCTGGATTaGGCTTACCACACTCAGACCCACACAAGGGCCATGCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TAEFCLTDLQSAQLD*AYHTQTHTRAMLFS
Trigger: GGAAAAGAGCATGGCCCTTGTGTGGGTCTGAGTGTGGTAAGCCCAATCCAGCTGTGCAGACTGAAGGTCAGTGAGACAAAACTCAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS CCA 90 bp AGCTCATGGAACCTCAGAGCAAGCATGCAGCAAACCTTTAATAAGTaGCAGAATGGGGATCCCAGAGAGGCCCCAGGCTCAAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SSWNLRASMQQTFNK*QNGDPREAPGSRKP
Trigger: AGGCTTCCTTGAGCCTGGGGCCTCTCTGGGATCCCCATTCTGCCACTTATTAAAGGTTTGCTGCATGCTTGCTCTGAGGTTCCATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS-3UTR CAA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 5 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GCAAAGCTCTTTCTGAGAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 5 (lower is better)
Translates to: AKLFLRSYHWPSRAAQKRGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...CCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTCTCAGAAAGAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CAA 90 bp GAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGCTTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: EDGGLGYRCHWDSRIPLACLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...AGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp AGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCTGTGCTGGCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: SRIPLALSLLSICNSCAGVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp ACTGGGCAGTGGTCACTGGGCTGCACGGTCCTTTCAAGTCCTAGGGTGGCCCCTTCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TGQWSLGCTVLSSPRVAPSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...AGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355423.7
ENST00000542343.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCAGAACTGGCTGGGTTTaGGGATCAAGGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESRTGWV*GSRRQM
Trigger: CATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTCT...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATACCTGGCTTCCTTCTTTaGACACACAGCCCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEIPGFLL*THSPSA
Trigger: AGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGG...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS CCA 90 bp ACAAAAGAGACAGGGACTGTGCTTTCAACGAGCCGTGCCACCACGTaGACCTTTCTGTGGCTGCAGGTCAAATCCCATGGAACAAGCAAA +
Preference number: 5 (lower is better)
Translates to: TKETGTVLSTSRATT*TFLWLQVKSHGTSK
Trigger: TTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCCTGTCTCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS-3UTR CAA 90 bp TGGAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: WNAKQKLLSGGIWGVGPSCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...ACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GTGAGGATGGTGGGCTGGGCTATCGTTGTCACTGGGATAGCCGAATCCCACTTGGATCAAACATATCCTTaGGGTAGTTGGTGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VRMVGWAIVVTGIAESHLDQTYP*GSWCQA
Trigger: AGCTTGGCACCAACTACCCAAAGGATATGTTTGATC...CAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293208.13
ENST00000580322.5
CDS-3UTR CAA 90 bp GAATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCGATCAAACATATCCTTaGGGTAGTTGGTGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: ECQTEAPLRWHLGSRSQSDQTYP*GSWCQA
Trigger: AGCTTGGCACCAACTACCCAAAGGATATGTTTGATC...GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000580322.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CACTGGGATAGCCGAATCCCACTTGCTCTTTCTCTTCTGAGCATCTGCAACAGCGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCA +
Preference number: 5 (lower is better)
Translates to: HWDSRIPLALSLLSICNSVVVPF*VPVTNS
Trigger: TGAGTTTGTGACGGGCACCAAAAAAGGCACCACGAC...GCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293208.13
ENST00000542343.5
ENST00000580322.5
ENST00000582022.5
CDS-3UTR CAA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTACCTGGCTTCCTTCTTTaGACACACAGCCCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: AGEASASEMPRGKNTALLPGFLL*THSPSA
Trigger: AGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGG...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp TTAATAGGCGGCAGACCCCAGGTGGTGCGTGGACAGACCCTGTCCACAGCGCCTCAGTTTATAAAGCTTTaGCATAAGTCACCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LIGGRPQVVRGQTLSTAPQFIKL*HKSPLV
Trigger: AACCAGAGGTGACTTATGCAAAAGCTTTATAAACTG...AGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CTGTGCCGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATTGCCGAGCTTCTCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LCRASPLGHQPQVFQSLNCRASP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCA...ATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS-3UTR CAA 90 bp GTCAGCTCCTGGGGGACAGGAGCTTGGCACTACACAAAAGAGGCATTGGAAATGTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: VSSWGTGAWHYTKEALEMCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...CATTTCCAATGCCTCTTTTGTGTAGTGCCAAGCTCCTGTCCCCCAGGAGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580322.5
CDS-3UTR CAA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCGAGATGACGGTGGTCTaGGAGCCGCTGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPEMTVV*EPLALV
Trigger: CACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTC...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp ACAACGGTGACTTCTTGGGTCACCCCTCTGAACAGCGTCCCAGGCCTCCATCACTCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TTVTSWVTPLNSVPGLHHSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...GTGATGGAGGCCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp AAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATCCCAACCAAGACTATaGAGTCTTGGGGGACATGTG +
Preference number: 5 (lower is better)
Translates to: KQKLLSGGIWGVGPSPEISQPRL*SLGGHV
Trigger: CACATGTCCCCCAAGACTCAATAGTCTTGGTTGGGA...TATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GCAGGAGAGGCCAGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAG +
Preference number: 5 (lower is better)
Translates to: AGEASASEMPRGKNTALLNNGDF*GHPSEQ
Trigger: CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTT...TAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp TCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTGAAATATACAAAGTGGCGCCTCTTCTGGAAACTGGCTaGACTTCAAAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SGGIWGVGPSPEIYKVAPLLETG*TSKAFL
Trigger: CAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAG...AGGCGCCACTTTGTATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GTCCATGCCCAGAGGCATACACGGATAACAACGGTGACTTCTTGGGTCACCCCTCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VHAQRHTRITTVTSWVTPLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...AGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CATCTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGATTCCATTATCTAACATaGTGCTTCTCAACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: HLPGGSGGILISSGDMFRFHYLT*CFSTSR
Trigger: GCGGCTGGTTGAGAAGCACAATGTTAGATAATGGAA...TCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583737.5
CDS GCA 90 bp CACGTGCTCATCATCAAAACAGCAGAGGCAGAGTTCACAGAAAGTTaGTGGACGCCATGTCTTTTCCTGCTGATGAGTGAGGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: HVLIIKTAEAEFTES*WTPCLFLLMSEGGD
Trigger: ATCTCCTCCCTCACTCATCAGCAGGAAAAGACATGGCGTCCAGCAACTTTCTGTGAACTCTGCCTCTGCTGTTTTGATGATGAGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp GTGCTCATCATCAAAACAGCAGAGGCAGAGTTCACAGAAAGTTGCTaGACGCCATGTCTTTTCCTGCTGATGAGTGAGGGAGGAGATGAG +
Preference number: 5 (lower is better)
Translates to: VLIIKTAEAEFTESC*TPCLFLLMSEGGDE
Trigger: CTCATCTCCTCCCTCACTCATCAGCAGGAAAAGACATGGCGTCCAGCAACTTTCTGTGAACTCTGCCTCTGCTGTTTTGATGATGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 90 bp CCAGGCTCAAGGAAGCCTCTCTCTGGCTCTCAGCTCCCTTTACACTaGCTTTATACTCCCTCCAAAGAAAAGCTTCCTCCAATCCCTAAT +
Preference number: 5 (lower is better)
Translates to: PGSRKPLSGSQLPLH*LYTPSKEKLPPIPN
Trigger: ATTAGGGATTGGAGGAAGCTTTTCTTTGGAGGGAGTATAAAGCCAGTGTAAAGGGAGCTGAGAGCCAGAGAGAGGCTTCCTTGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS-3UTR CAA 90 bp AGGAGTCCTCAGACCAGCCATGGGGATCAAACATATCCTTTGGGTAGTTGGTGCTGTCTTGCAAGTGATTaGAACATCTGCCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: RSPQTSHGDQTYPLGSWCCLASD*NICQGV
Trigger: AACCCCCTGGCAGATGTTCAAATCACTTGCAAGACA...GCACCAACTACCCAAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CAA 90 bp GAACATCTGCCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCGATCAAACATATCCTTaGGGTAGTTGGTGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: EHLPGGSGGILISSGDMFDQTYP*GSWCQA
Trigger: AGCTTGGCACCAACTACCCAAAGGATATGTTTGATC...GAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CAA 90 bp TCTGGAAACTGGCTTGACTTCAAAAGCCTTCCTGGGTGTGTCCAAAAAGTGATCCCCTCAGGTCACTGCTaGGCCTTCTTCACAATGGTG +
Preference number: 5 (lower is better)
Translates to: SGNWLDFKSLPGCVQKVIPSGHC*AFFTMV
Trigger: CACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGG...GATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CCAGGGGGTTCTGGCGGGATCTTGATTTCATCAGGCGACATGTTCCGAACTCTTCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: PGGSGGILISSGDMFRTLLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...AAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS TCA 90 bp AGACCCACACAAGGGCCATGCTCTTTTCCCTGTATGTCACTAGCTTaGACATTCAATGGAGGAAGACCAGACATCGCTCTGGTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: RPTQGPCSFPCMSLA*TFNGGRPDIALVLR
Trigger: TCTTAGGACCAGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAGCATGGCCCTTGTGTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS CCA 90 bp AGGGCCATGCTCTTTTCCCTGTATGTCACTAGCTTGAACATTCAATaGAGGAAGACCAGACATCGCTCTGGTCCTAAGACCTCTCACCTA +
Preference number: 5 (lower is better)
Translates to: RAMLFSLYVTSLNIQ*RKTRHRSGPKTSHL
Trigger: TAGGTGAGAGGTCTTAGGACCAGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAGCATGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS-3UTR CAA 90 bp ATAGTAGGAGTCCTCAGACCAGCCATGGGGATCAAACATATCCTTTGGGTAGTTGGTTCTGGCGGGATCTaGATTTCATCAGGCGACATG +
Preference number: 5 (lower is better)
Translates to: IVGVLRPAMGIKHILWVVGSGGI*ISSGDM
Trigger: CATGTCGCCTGATGAAATCAAGATCCCGCCAGAACC...AACTACCCAAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS-3UTR CAA 90 bp ACCAAGACTATTGAGTCTTGGGGGACATGTGAGCTGAAGCATTTGCCTGCAAACTCCCAACCAAGACTATaGAGTCTTGGGGGACATGTG +
Preference number: 5 (lower is better)
Translates to: TKTIESWGTCELKHLPANSQPRL*SLGGHV
Trigger: CACATGTCCCCCAAGACTCAATAGTCTTGGTTGGGA...GTTTGCAGGCAAATGCTTCAGCTCACATGTCCCCCAAGACTCAATAGTCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CCTGGGGGTCTCGCTTTTCTGCTTCTGTATTATCCTTTGGGTCATCAGCCTCAGCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: PGGLAFLLLYYPLGHQPQLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...CTGAGGCTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579877.5
ENST00000583737.5
CDS TCA 90 bp TCAGCCAGGCCTCTCGCCTTTCTAGTCAGGAGATATGGCACAATCTaGAAGGCTGGAAATCCAATGTGTCTCAGGATTTGTTCATTCCTG +
Preference number: 5 (lower is better)
Translates to: SARPLAFLVRRYGTI*KAGNPMCLRICSFL
Trigger: CAGGAATGAACAAATCCTGAGACACATTGGATTTCCAGCCTTTCAGATTGTGCCATATCTCCTGACTAGAAAGGCGAGAGGCCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS-3UTR CAA 90 bp AATGCCAAACAGAAGCTCCTCTCAGGTGGCATCTGGGGAGTAGGTCCCAGTCCTCAGTTTATAAAGCTTTaGCATAAGTCACCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: NAKQKLLSGGIWGVGPSPQFIKL*HKSPLV
Trigger: AACCAGAGGTGACTTATGCAAAAGCTTTATAAACTG...AGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GAAGCTACCACTGGCCCAGTAGGGCTGCACAGAAAAGGTTACGTTCTTTTCTCTCTTCTGTATTATCCTTaGGGTCATCAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: EATTGPVGLHRKGYVLFSLLYYP*GHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGATAATACAGAAG...AGAGAAAAGAACGTAACCTTTTCTGTGCAGCCCTACTGGGCCAGTGGTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578909.1
CDS-3UTR CAA 90 bp ACCAGGTGCCATTTCAGAACCACCTTTCTAAACCTCTGCCCACCCACTGAAAGCTCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TRCHFRTTFLNLCPPTESSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...GCTTTCAGTGGGTGGGCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp CGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATCGTCATTTCCATTATCTAACATaGTGCTTCTCAACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RASPLGHQPQVFQSLNRHFHYLT*CFSTSR
Trigger: GCGGCTGGTTGAGAAGCACAATGTTAGATAATGGAA...ATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAGAAGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS TCA 90 bp AAACAGTGTCCCATGACAGCTACATCCACATGTCCTGCAGAAACCTaGGAGCAAAGGCTTCTTAGACGTTTTCTGGATTTCACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: KQCPMTATSTCPAET*EQRLLRRFLDFTVL
Trigger: CAGAACAGTGAAATCCAGAAAACGTCTAAGAAGCCTTTGCTCTCAGGTTTCTGCAGGACATGTGGATGTAGCTGTCATGGGACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS-3UTR CAA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACAAACAACGGTGACTTCTaGGGTCACCCCTCTGAACAG +
Preference number: 5 (lower is better)
Translates to: VLPNHLTTLYYCDFREETNNGDF*GHPSEQ
Trigger: CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTT...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp AGTGCATCTGAGATGCCAAGAGGTAAGAATACGGCACTTTTAATAGGCGGCAGATCACAAACTCAATTTTaGTTCGCTCCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SASEMPRGKNTALLIGGRSQTQF*FAPFWP
Trigger: AGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGA...TCTGCCGCCTATTAAAAGTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS-3UTR CAA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCCTTCTGGAAACTGGCTaGACTTCAAAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPLLETG*TSKAFL
Trigger: CAGGAAGGCTTTTGAAGTCAAGCCAGTTTCCAGAAG...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000582022.5
ENST00000584667.6
CDS GCA 90 bp AACCAGTGTTCAAGAGTGTTAGTAACAATACATGGGACTGTAAAATaGCCTCACATTTTCCCTCTAGAGAACAGCTTTCTGGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: NQCSRVLVTIHGTVK*PHIFPLENSFLGAD
Trigger: ATCAGCACCCAGAAAGCTGTTCTCTAGAGGGAAAATGTGAGGGCATTTTACAGTCCCATGTATTGTTACTAACACTCTTGAACACTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS CCA 90 bp GTGACTCTCAGGAAACCAGTGTTCAAGAGTGTTAGTAACAATACATaGGACTGTAAAATGCCCTCACATTTTCCCTCTAGAGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: VTLRKPVFKSVSNNT*DCKMPSHFPSREQL
Trigger: AAGCTGTTCTCTAGAGGGAAAATGTGAGGGCATTTTACAGTCCCATGTATTGTTACTAACACTCTTGAACACTGGTTTCCTGAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS-3UTR CAA 90 bp GCAGGAACTTTACAGTTTATAAAGCTTTTGCATAAGTCACCTCTGGTTCTTCCCGATCAAACATATCCTTaGGGTAGTTGGTGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: AGTLQFIKLLHKSPLVLPDQTYP*GSWCQA
Trigger: AGCTTGGCACCAACTACCCAAAGGATATGTTTGATC...GGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584667.6
CDS-3UTR CAA 90 bp GTTCTTCCCAACCATCTTACGACGCTTTATTACTGTGATTTCAGAGAAGAAACACAGTTTATAAAGCTTTaGCATAAGTCACCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VLPNHLTTLYYCDFREETQFIKL*HKSPLV
Trigger: AACCAGAGGTGACTTATGCAAAAGCTTTATAAACTG...TGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355423.7
ENST00000582022.5
ENST00000584667.6
CDS CAA 90 bp GCTGAGAGGCTCAGAGCATCGCCGGGTGATGACACGGGGCCAGGGTaGGGGGCAGCCTGGACACCTTCTGGGCTCAGCCAGCAGGACCCA +
Preference number: 6 (lower is better)
Translates to: AERLRASPGDDTGPG*GAAWTPSGLSQQDP
Trigger: TGGGTCCTGCTGGCTGAGCCCAGAAGGTGTCCAGGCTGCCCCCAACCCTGGCCCCGTGTCATCACCCGGCGATGCTCTGAGCCTCTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS GCA 72 bp GTGCCCGTCACAAACTCAATACCCAGGAGGAGGCGGTaGCCGCCCGCACAGGGGAAGGACAGCTCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: VPVTNSIPRRRR*PPAQGKDSSGP
Trigger: GGGACCGGAGCTGTCCTTCCCCTGTGCGGGCGGGCACCGCCTCCTCCTGGGTATTGAGTTTGTGACGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293208.13
CDS GCA 72 bp TCCGAACCCTCTTCTTCCCGCATCGCAGCAGCCGGATaGTCCCGAGCCCCACGCCGGTCTCTCCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: SEPSSSRIAAAG*SRAPRRSLLHA
Trigger: GGCATGGAGGAGAGACCGGCGTGGGGCTCGGGAGCATCCGGCTGCTGCGATGCGGGAAGAAGAGGGTTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 72 bp GCCGGCGCTGAGCAGGCACAAGTCCACGTCCCTGCATaGGACCTGAACCATCCAGCTCCTGGGGCTGACACA +
Preference number: 6 (lower is better)
Translates to: AGAEQAQVHVPA*DLNHPAPGADT
Trigger: TGTGTCAGCCCCAGGAGCTGGATGGTTCAGGTCCCATGCAGGGACGTGGACTTGTGCCTGCTCAGCGCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579864.5
CDS GCA 72 bp GACAGCTCCGGTCCCCAGGCGCTGCAGACACGTCCCTaGAACAAGCCTGGGGTTTGGAAGGGAGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: DSSGPQALQTRP*NKPGVWKGEGK
Trigger: CTTTCCCTCTCCCTTCCAAACCCCAGGCTTGTTGCAGGGACGTGTCTGCAGCGCCTGGGGACCGGAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS TCA 72 bp ACGTGGGACCTAATAGGTAGCACCCAGGCGAGCCACTaGGGGCAGCTCTGGAGGCCAAGACACTCACCGAGC +
Preference number: 6 (lower is better)
Translates to: TWDLIGSTQASH*GQLWRPRHSPS
Trigger: GCTCGGTGAGTGTCTTGGCCTCCAGAGCTGCCCTCAGTGGCTCGCCTGGGTGCTACCTATTAGGTCCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS GCA 72 bp CATTCAACCTGGCAGGGCACCACGTCCAGGCCAGGCTaGTTAGCAACCCATCTCTTCGAGCCACTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: HSTWQGTTSRPG*LATHLFEPLPP
Trigger: AGGGGGCAGTGGCTCGAAGAGATGGGTTGCTAAGCAGCCTGGCCTGGACGTGGTGCCCTGCCAGGTTGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 72 bp GCAGGCCAGCGGGAGTCTAGGGAGCAGACCCCGAAGTaGCCCACCCCAGACTCCAAAGGTGCTTCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: AGQRESREQTPK*PTPDSKGASQS
Trigger: ACTTTGAGAAGCACCTTTGGAGTCTGGGGTGGGCCACTTCGGGGTCTGCTCCCTAGACTCCCGCTGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS TCA 72 bp ATCTTATTCCCACAGCCCGGGCGTGGCTCACTCCTATaGCTCAAGACGCCGACTTCCGGGCGGAAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: ILFPQPGRGSLL*LKTPTSGRKGR
Trigger: CCTGCCTTTCCGCCCGGAAGTCGGCGTCTTGAGTCATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS GCA 72 bp CTGCTTAGCAACCCATCTCTTCGAGCCACTGCCCCCTaGCAATCAGGTGGGCAAAGAGGAGGCTGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: LLSNPSLRATAP*QSGGQRGGWEQ
Trigger: CTGCTCCCAGCCTCCTCTTTGCCCACCTGATTGGCAGGGGGCAGTGGCTCGAAGAGATGGGTTGCTAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 72 bp CAAAGTAGCAAGGCTGAGCCCAGGCCCAGATCCACGTaGTGTCTGTCGCCCAAACAAGCCAGGGAGACCCTG +
Preference number: 6 (lower is better)
Translates to: QSSKAEPRPRST*CLSPKQARETL
Trigger: CAGGGTCTCCCTGGCTTGTTTGGGCGACAGACAGCACGTGGATCTGGGCCTGGGCTCAGCCTTGCTACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS CCA 72 bp AGGTGCAGAGCTCCGCAGGCTCCACTTACACAGACATaGCACACCACGCCACGGCTCCAAAAGGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: RCRAPQAPLTQT*HTTPRLQKEGA
Trigger: GGCACCTTCCTTTTGGAGCCGTGGCGTGGTGTGCCATGTCTGTGTAAGTGGAGCCTGCGGAGCTCTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 72 bp CTTCTTCCCCGCCATCTTATTCCCACAGCCCGGGCGTaGCTCACTCCTATGACTCAAGACGCCGACTTCCGG +
Preference number: 6 (lower is better)
Translates to: LLPRHLIPTARA*LTPMTQDADFR
Trigger: CCGGAAGTCGGCGTCTTGAGTCATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGATGGCGGGGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583170.5
CDS CCA 72 bp CCCAAACAAGCCAGGGAGACCCTGGCTCCATGTGTGTaGCAGGAGGCAGGGCAGCTCTGCAATCTACCTGCA +
Preference number: 6 (lower is better)
Translates to: PKQARETLAPCV*QEAGQLCNLPA
Trigger: TGCAGGTAGATTGCAGAGCTGCCCTGCCTCCTGCCACACACATGGAGCCAGGGTCTCCCTGGCTTGTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS CAA 90 bp CTGGGTGTCCCCATCACCCTCCAGCCCCGTGTGCCAGACGCACCTTaGGGTAGTTGGTGCCAAGCTCGTCAATGGCACAGAACTGGATCA +
Preference number: 6 (lower is better)
Translates to: LGVPITLQPRVPDAP*GSWCQARQWHRTGS
Trigger: TGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTGGAGGGTGATGGGGACACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CAA 90 bp CCAGCAAGCCTGCTGCAGCCAACTGGGCAACGTATACCCTGCCTGTaGCTCTCCCCTGGGTCTGAGGAAGCTTGCCTGAATGGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: PASLLQPTGQRIPCL*LSPGSEEACLNGVQ
Trigger: CTGCACTCCATTCAGGCAAGCTTCCTCAGACCCAGGGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS TCA 72 bp GAGCCCCACGCCGGTCTCTCCTCCATGCCTTTTCAGTaGCCAAACCCACCATCGCTGAGGAGAACACAAGCC +
Preference number: 6 (lower is better)
Translates to: EPHAGLSSMPFQ*PNPPSLRRTQA
Trigger: GGCTTGTGTTCTCCTCAGCGATGGTGGGTTTGGTCACTGAAAAGGCATGGAGGAGAGACCGGCGTGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 72 bp CTGGCTCCATGTGTGTGGCAGGAGGCAGGGCAGCTCTaGAATCTACCTGCAACAGCTGTGCTGGCAGTGGTA +
Preference number: 6 (lower is better)
Translates to: LAPCVWQEAGQL*NLPATAVLAVV
Trigger: TACCACTGCCAGCACAGCTGTTGCAGGTAGATTGCAGAGCTGCCCTGCCTCCTGCCACACACATGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS CCA 72 bp GAGTCCAACAAGCTGGGCCATGAGCTTGCTGAGCCCTaGGTGCCTCTGTCACTGTGCCGAGCTTCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: ESNKLGHELAEP*VPLSLCRASPL
Trigger: CAAAGGAGAAGCTCGGCACAGTGACAGAGGCACCCAGGGCTCAGCAAGCTCATGGCCCAGCTTGTTGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578288.5
ENST00000578354.5
ENST00000583536.5
CDS CCA 72 bp CAAGGCTCCGCACCATACCACACCCACCCCTTCTCATaGACTCAACTGCAGAGGCCCAATCCCCACACAAGG +
Preference number: 6 (lower is better)
Translates to: QGSAPYHTHPFS*TQLQRPNPHTR
Trigger: CCTTGTGTGGGGATTGGGCCTCTGCAGTTGAGTCCATGAGAAGGGGTGGGTGTGGTATGGTGCGGAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS CCA 72 bp AGGAGAACACAAGCCAGCAAGCCTGCTGCAGCCAACTaGGCAACGTATACCCTGCCTGTTGCTCTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: RRTQASKPAAAN*ATYTLPVALPW
Trigger: CCAGGGGAGAGCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTGTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 72 bp CTCTGGAGGCCAAGACACTCACCGAGCAGCGCAAGCTaGGCCTGGCACTCTCTTAGGGAACTATTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LWRPRHSPSSAS*AWHSLRELFPS
Trigger: GGAGGGAAATAGTTCCCTAAGAGAGTGCCAGGCCCAGCTTGCGCTGCTCGGTGAGTGTCTTGGCCTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS TCA 72 bp CGCCTCGATTCCAGCCTCGCCATCAGACTCGGGCTCTaGATCTTCCGCGTAAACTGCGAGAGACGACAGAAC +
Preference number: 6 (lower is better)
Translates to: RLDSSLAIRLGL*IFRVNCERRQN
Trigger: GTTCTGTCGTCTCTCGCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000293208.13
ENST00000355423.7
ENST00000542343.5
ENST00000577292.5
ENST00000578288.5
ENST00000578354.5
ENST00000579864.5
ENST00000579877.5
ENST00000580322.5
ENST00000580484.5
ENST00000582022.5
ENST00000583170.5
ENST00000583737.5
ENST00000584667.6
ENST00000584861.5
CDS TCA 72 bp CTGAGCAGGCACAAGTCCACGTCCCTGCATGGGACCTaGACCATCCAGCTCCTGGGGCTGACACAAAACCTT +
Preference number: 6 (lower is better)
Translates to: LSRHKSTSLHGT*TIQLLGLTQNL
Trigger: AAGGTTTTGTGTCAGCCCCAGGAGCTGGATGGTTCAGGTCCCATGCAGGGACGTGGACTTGTGCCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579864.5
CDS TCA 72 bp TCTTTGGTCTTTAGCCAAGGGGCGGCTGGCAAGTGCTaGAGAACATGGGAGCACGAAGCCCCCATCCAGCGA +
Preference number: 6 (lower is better)
Translates to: SLVFSQGAAGKC*RTWEHEAPIQR
Trigger: TCGCTGGATGGGGGCTTCGTGCTCCCATGTTCTTCAGCACTTGCCAGCCGCCCCTTGGCTAAAGACCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 72 bp CATGAGCTTGCTGAGCCCTGGGTGCCTCTGTCACTGTaGCGAGCTTCTCCTTTGGGTCATCAGCCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: HELAEPWVPLSL*RASPLGHQPQV
Trigger: AACCTGAGGCTGATGACCCAAAGGAGAAGCTCGGCACAGTGACAGAGGCACCCAGGGCTCAGCAAGCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578288.5
ENST00000578354.5
ENST00000583536.5
CDS GCA 72 bp CAGCCCCGTGTGCCAGACGCACCTTTGGGTAGTTGGTaGCAAGCTCGTCAATGGCACAGAACTGGATCAGCT +
Preference number: 6 (lower is better)
Translates to: QPRVPDAPLGSW*QARQWHRTGSA
Trigger: AGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 72 bp ACCATCGCTGAGGAGAACACAAGCCAGCAAGCCTGCTaGAGCCAACTGGGCAACGTATACCCTGCCTGTTGC +
Preference number: 6 (lower is better)
Translates to: TIAEENTSQQAC*SQLGNVYPACC
Trigger: GCAACAGGCAGGGTATACGTTGCCCAGTTGGCTGCAGCAGGCTTGCTGGCTTGTGTTCTCCTCAGCGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 72 bp GCCAAACTGATGCTCCCTGAAGAACCCAGACCACACTaGCAGGGAACAAGTGGTGCTCAGGGCCCTAACGTG +
Preference number: 6 (lower is better)
Translates to: AKLMLPEEPRPH*QGTSGAQGPNV
Trigger: CACGTTAGGGCCCTGAGCACCACTTGTTCCCTGGCAGTGTGGTCTGGGTTCTTCAGGGAGCATCAGTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS CCA 72 bp CTCCAGCCCCGTGTGCCAGACGCACCTTTGGGTAGTTaGTGCCAAGCTCGTCAATGGCACAGAACTGGATCA +
Preference number: 6 (lower is better)
Translates to: LQPRVPDAPLGS*CQARQWHRTGS
Trigger: TGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCTGGCACACGGGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 72 bp AGGCCAAGACACTCACCGAGCAGCGCAAGCTGGGCCTaGCACTCTCTTAGGGAACTATTTCCCTCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: RPRHSPSSASWA*HSLRELFPSLQ
Trigger: CTGAAGGGAGGGAAATAGTTCCCTAAGAGAGTGCCAGGCCCAGCTTGCGCTGCTCGGTGAGTGTCTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS CAA 72 bp GTGGTGGTGGACGTGGCGTTGGTCGTGGTGCCTTTTTaGGTGCCCGTCACAAACTCAATACCCAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: VVVDVALVVVPF*VPVTNSIPRRR
Trigger: CCTCCTCCTGGGTATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCCACGTCCACCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293208.13
CDS GCA 72 bp CAACGAGCCGTGCCACCACGTGGACCTTTCTGTGGCTaGAGGTCAAATCCCATGGAACAAGCAAAGGACCCT +
Preference number: 6 (lower is better)
Translates to: QRAVPPRGPFCG*RSNPMEQAKDP
Trigger: AGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 72 bp GCCTGGACACCTTCTGGGCTCAGCCAGCAGGACCCATaGACTCCACATGTGCCTTTTTCATCTAGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: AWTPSGLSQQDP*TPHVPFSSRRS
Trigger: AGACCTCCTAGATGAAAAAGGCACATGTGGAGTGCATGGGTCCTGCTGGCTGAGCCCAGAAGGTGTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS GCA 72 bp TCAAGGGTTAAGAATGAGAAACCCCAACTATCCCCTTaGACCAGCTCCCACGTTCCTGGCCCAGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SRVKNEKPQLSP*TSSHVPGPAAS
Trigger: GCTGGCTGCTGGGCCAGGAACGTGGGAGCTGGTGCAAGGGGATAGTTGGGGTTTCTCATTCTTAACCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS CCA 72 bp CCCATTCCTCAGAACACTGCAGCTATTCATTCAACCTaGCAGGGCACCACGTCCAGGCCAGGCTGCTTAGCA +
Preference number: 6 (lower is better)
Translates to: PIPQNTAAIHST*QGTTSRPGCLA
Trigger: TGCTAAGCAGCCTGGCCTGGACGTGGTGCCCTGCCAGGTTGAATGAATAGCTGCAGTGTTCTGAGGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS CCA 72 bp CACGTGGACCTTTCTGTGGCTGCAGGTCAAATCCCATaGAACAAGCAAAGGACCCTGGGTGTCCCCATCACC +
Preference number: 6 (lower is better)
Translates to: HVDLSVAAGQIP*NKQRTLGVPIT
Trigger: GGTGATGGGGACACCCAGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 72 bp ACAGGGACTGTGCTTTCAACGAGCCGTGCCACCACGTaGACCTTTCTGTGGCTGCAGGTCAAATCCCATGGA +
Preference number: 6 (lower is better)
Translates to: TGTVLSTSRATT*TFLWLQVKSHG
Trigger: TCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 72 bp GGGATCAAACATATCCCGGGGCTCGGCTGTCATCTTTaGTCTTTAGCCAAGGGGCGGCTGGCAAGTGCTGAA +
Preference number: 6 (lower is better)
Translates to: GIKHIPGLGCHL*SLAKGRLASAE
Trigger: TTCAGCACTTGCCAGCCGCCCCTTGGCTAAAGACCAAAGATGACAGCCGAGCCCCGGGATATGTTTGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS TCA 72 bp ATCCTTTGGGTCATCAGCCTCAGGTTTTTCAGTCTCTaGATCGTCATCTTCCAGCCGCGCTGCCCACCGCCT +
Preference number: 6 (lower is better)
Translates to: ILWVISLRFFSL*IVIFQPRCPPP
Trigger: AGGCGGTGGGCAGCGCGGCTGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579877.5
CDS TCA 72 bp AGGCCCAGAGATAACAGTTTGGTCTCCCAGCCAAACTaGTGCTCCCTGAAGAACCCAGACCACACTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RPRDNSLVSQPN*CSLKNPDHTAR
Trigger: CCTGGCAGTGTGGTCTGGGTTCTTCAGGGAGCATCAGTTTGGCTGGGAGACCAAACTGTTATCTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581207.5
ENST00000584557.1
CDS TCA 72 bp GGAGATAAAGCAGAAATCAGGATCACGATCCACCAATaGGCGGTGCCCTCTTTCCCTTCCCCCTGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: GDKAEIRITIHQ*AVPSFPSPCRP
Trigger: TGGCCTGCAGGGGGAAGGGAAAGAGGGCACCGCTCATTGGTGGATCGTGATCCTGATTTCTGCTTTATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584557.1
CDS GCA 72 bp AACCTGGAGATGGAAAGGAGTGTGGGGTGTGTGTGCTaGCAGGCTCAGCTGAGGTTGTTGAGTCACGTCTCT +
Preference number: 6 (lower is better)
Translates to: NLEMERSVGCVC*QAQLRLLSHVS
Trigger: AGAGACGTGACTCAACAACCTCAGCTGAGCCTGGCAGCACACACACCCCACACTCCTTTCCATCTCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000578354.5
CDS GCA 72 bp CACCATACCACACCCACCCCTTCTCATGGACTCAACTaGAGAGGCCCAATCCCCACACAAGGAGTCTACCAT +
Preference number: 6 (lower is better)
Translates to: HHTTPTPSHGLN*RGPIPTQGVYH
Trigger: ATGGTAGACTCCTTGTGTGGGGATTGGGCCTCTGCAGTTGAGTCCATGAGAAGGGGTGGGTGTGGTATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS TCA 72 bp GACTCAGTCTTAGCCCCCTTTCCAGAAAGTCCCTCCTaGTGCTGGGACAGGCCAAATTCCCCATTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: DSVLAPFPESPS*CWDRPNSPFLR
Trigger: TCTGAGGAATGGGGAATTTGGCCTGTCCCAGCATCAGGAGGGACTTTCTGGAAAGGGGGCTAAGACTGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS TCA 72 bp CAATGGCACAGAACTGGATCAGCTTCTCGTAGATGCTaGAAGAACAGTGCCGGCGCTGAGCAGGCACAAGTC +
Preference number: 6 (lower is better)
Translates to: QWHRTGSASRRC*KNSAGAEQAQV
Trigger: GACTTGTGCCTGCTCAGCGCCGGCACTGTTCTTTCAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS GCA 72 bp AACAAAAGAGACAGGGACTGTGCTTTCAACGAGCCGTaGCACCACGTGGACCTTTCTGTGGCTGCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: NKRDRDCAFNEP*HHVDLSVAAGQ
Trigger: TTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCCTGTCTCTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 72 bp CTTTCAACGAGCCGTGCCACCACGTGGACCTTTCTGTaGCTGCAGGTCAAATCCCATGGAACAAGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: LSTSRATTWTFL*LQVKSHGTSKG
Trigger: TCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCACAGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CCA 72 bp CTGAGTTTTGTCTCACTGACCTTCAGTCTGCACAGCTaGATTGGGCTTACCACACTCAGACCCACACAAGGG +
Preference number: 6 (lower is better)
Translates to: LSFVSLTFSLHS*IGLTTLRPTQG
Trigger: CCCTTGTGTGGGTCTGAGTGTGGTAAGCCCAATCCAGCTGTGCAGACTGAAGGTCAGTGAGACAAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS CCA 72 bp AACCTCAGAGCAAGCATGCAGCAAACCTTTAATAAGTaGCAGAATGGGGATCCCAGAGAGGCCCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: NLRASMQQTFNK*QNGDPREAPGS
Trigger: TGAGCCTGGGGCCTCTCTGGGATCCCCATTCTGCCACTTATTAAAGGTTTGCTGCATGCTTGCTCTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS GCA 72 bp AGCCACGGTCCAAGCCCTCCGTCACAAGTCTTCCCTTaGCTCCATTGTCTCAAGTGTAAAATGGCAAGAACA +
Preference number: 6 (lower is better)
Translates to: SHGPSPPSQVFP*LHCLKCKMART
Trigger: TGTTCTTGCCATTTTACACTTGAGACAATGGAGGCAAGGGAAGACTTGTGACGGAGGGCTTGGACCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CAA 72 bp CCAAACATACGAACTGAGCCACAGTGTTCAAACACCTaGTTTGCATCCAGCCACCCACCACAGCCAACACCA +
Preference number: 6 (lower is better)
Translates to: PNIRTEPQCSNT*FASSHPPQPTP
Trigger: TGGTGTTGGCTGTGGTGGGTGGCTGGATGCAAACAAGGTGTTTGAACACTGTGGCTCAGTTCGTATGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS CAA 72 bp AATGGCAAGAACACACCTGTTTCCCCCATTTCTGGGTaGCTGACACCCAGCCCCTCAAAGCCAGTTAGATCA +
Preference number: 6 (lower is better)
Translates to: NGKNTPVSPISG*LTPSPSKPVRS
Trigger: TGATCTAACTGGCTTTGAGGGGCTGGGTGTCAGCAACCCAGAAATGGGGGAAACAGGTGTGTTCTTGCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CAA 90 bp CAGACCCACACAAGGGCCATGCTCTTTTCCCTGTATGTCACTAGCTaGAACATTCAATGGAGGAAGACCAGACATCGCTCTGGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: QTHTRAMLFSLYVTS*NIQWRKTRHRSGPK
Trigger: CTTAGGACCAGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAGCATGGCCCTTGTGTGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS GCA 72 bp ACCTCTACCGCTGGTACCAAGGAAGCAAGAGGTGACTaGTTTGTAACAGCAGACTCCCGAGATGAAAATGCA +
Preference number: 6 (lower is better)
Translates to: TSTAGTKEARGD*FVTADSRDENA
Trigger: TGCATTTTCATCTCGGGAGTCTGCTGTTACAAAGCAGTCACCTCTTGCTTCCTTGGTACCAGCGGTAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 72 bp CTCAGCCAGGCCTCTCGCCTTTCTAGTCAGGAGATATaGCACAATCTGAAAGGCTGGAAATCCAATGTGTCT +
Preference number: 6 (lower is better)
Translates to: LSQASRLSSQEI*HNLKGWKSNVS
Trigger: AGACACATTGGATTTCCAGCCTTTCAGATTGTGCCATATCTCCTGACTAGAAAGGCGAGAGGCCTGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS CAA 72 bp CATCCAGCCACCCACCACAGCCAACACCAAATACCTTaGGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: HPATHHSQHQIP*GHQPQVFQSLN
Trigger: ATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGTATTTGGTGTTGGCTGTGGTGGGTGGCTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS CAA 72 bp GGGCCAGGCACCAGGCCGGCCACCGGAATCTCTTTATaGGACTATTTCAGAACAATAGGGACTCAAACAAAA +
Preference number: 6 (lower is better)
Translates to: GPGTRPATGISL*DYFRTIGTQTK
Trigger: TTTTGTTTGAGTCCCTATTGTTCTGAAATAGTCCAATAAAGAGATTCCGGTGGCCGGCCTGGTGCCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583329.5
CDS CAA 90 bp CCTTGTTTGCATCCAGCCACCCACCACAGCCAACACCAAATACCTTaGGGTCATCAGCCTCAGGTTTTTCAGTCTCTGAATCGTCATCTT +
Preference number: 6 (lower is better)
Translates to: PCLHPATHHSQHQIP*GHQPQVFQSLNRHL
Trigger: AAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGTATTTGGTGTTGGCTGTGGTGGGTGGCTGGATGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS TCA 72 bp CAAGGGCCATGCTCTTTTCCCTGTATGTCACTAGCTTaGACATTCAATGGAGGAAGACCAGACATCGCTCTG +
Preference number: 6 (lower is better)
Translates to: QGPCSFPCMSLA*TFNGGRPDIAL
Trigger: CAGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAGCATGGCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS GCA 72 bp GATAAAGGGGCAGCTCATGGAACCTCAGAGCAAGCATaGAGCAAACCTTTAATAAGTGGCAGAATGGGGATC +
Preference number: 6 (lower is better)
Translates to: DKGAAHGTSEQA*SKPLISGRMGI
Trigger: GATCCCCATTCTGCCACTTATTAAAGGTTTGCTGCATGCTTGCTCTGAGGTTCCATGAGCTGCCCCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 72 bp ATCAAAACAGCAGAGGCAGAGTTCACAGAAAGTTGCTaGACGCCATGTCTTTTCCTGCTGATGAGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: IKTAEAEFTESC*TPCLFLLMSEG
Trigger: TCCCTCACTCATCAGCAGGAAAAGACATGGCGTCCAGCAACTTTCTGTGAACTCTGCCTCTGCTGTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580601.5
ENST00000584240.5
CDS TCA 72 bp CCCATGACAGCTACATCCACATGTCCTGCAGAAACCTaGGAGCAAAGGCTTCTTAGACGTTTTCTGGATTTC +
Preference number: 6 (lower is better)
Translates to: PMTATSTCPAET*EQRLLRRFLDF
Trigger: GAAATCCAGAAAACGTCTAAGAAGCCTTTGCTCTCAGGTTTCTGCAGGACATGTGGATGTAGCTGTCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580601.5
CDS CCA 72 bp CTCTTTTCCCTGTATGTCACTAGCTTGAACATTCAATaGAGGAAGACCAGACATCGCTCTGGTCCTAAGACC +
Preference number: 6 (lower is better)
Translates to: LFSLYVTSLNIQ*RKTRHRSGPKT
Trigger: GGTCTTAGGACCAGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS CAA 72 bp ACAAGGGCCATGCTCTTTTCCCTGTATGTCACTAGCTaGAACATTCAATGGAGGAAGACCAGACATCGCTCT +
Preference number: 6 (lower is better)
Translates to: TRAMLFSLYVTS*NIQWRKTRHRS
Trigger: AGAGCGATGTCTGGTCTTCCTCCATTGAATGTTCAAGCTAGTGACATACAGGGAAAAGAGCATGGCCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577292.5
ENST00000579864.5
CDS TCA 72 bp CCTCTCGCCTTTCTAGTCAGGAGATATGGCACAATCTaGAAGGCTGGAAATCCAATGTGTCTCAGGATTTGT +
Preference number: 6 (lower is better)
Translates to: PLAFLVRRYGTI*KAGNPMCLRIC
Trigger: ACAAATCCTGAGACACATTGGATTTCCAGCCTTTCAGATTGTGCCATATCTCCTGACTAGAAAGGCGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS CAA 72 bp ATTTTATCCCAGAAAATGTCCACACAGTTGCACAGTTaGTCAGTGGGACAGATCTTGACCAAACATACGAAC +
Preference number: 6 (lower is better)
Translates to: ILSQKMSTQLHS*SVGQILTKHTN
Trigger: GTTCGTATGTTTGGTCAAGATCTGTCCCACTGACAAACTGTGCAACTGTGTGGACATTTTCTGGGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584861.5
CDS CCA 72 bp AGGAAACCAGTGTTCAAGAGTGTTAGTAACAATACATaGGACTGTAAAATGCCCTCACATTTTCCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: RKPVFKSVSNNT*DCKMPSHFPSR
Trigger: TCTAGAGGGAAAATGTGAGGGCATTTTACAGTCCCATGTATTGTTACTAACACTCTTGAACACTGGTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578288.5
ENST00000580601.5
CDS TCA 72 bp CTGGAAATCCAATGTGTCTCAGGATTTGTTCATTCCTaGGTTGTCTCCAGGTTCTTTCTTTATAAAGCTTAT +
Preference number: 6 (lower is better)
Translates to: LEIQCVSGFVHS*VVSRFFLYKAY
Trigger: ATAAGCTTTATAAAGAAAGAACCTGGAGACAACTCAGGAATGAACAAATCCTGAGACACATTGGATTTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584861.5