RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAP18 (Homo sapiens)

Ensembl gene IDs: ENSG00000150459

Ensembl transcript IDs: ENST00000382533.8, ENST00000450573.5, ENST00000471009.1, ENST00000485646.1, ENST00000607003.5, ENST00000621421.4

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGCTCACTCTCACGTGTCCTTTCCAAC +
Preference number: 1 (lower is better)
Translates to: LVQHSFFNLPQLIPN*LCCHLSSLSRVLSN
Trigger: GTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 90 bp CACAGCTTCTTCAACTTGCCGCAGCTTATTCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCACGTGTCCTTTCCAACTGCATACAG +
Preference number: 1 (lower is better)
Translates to: HSFFNLPQLIPNCLC*HLSSLSRVLSNCIQ
Trigger: CTGTATGCAGTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 90 bp TGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTaGTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACA +
Preference number: 1 (lower is better)
Translates to: CCNQDFNVLLHCLHH*FTASQIRCTPLPST
Trigger: TGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 90 bp CAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCTTTACTGCCTCTCAGATCAGATGCA +
Preference number: 1 (lower is better)
Translates to: QGCRVTAAIRTSMFC*TVFITALLPLRSDA
Trigger: TGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR TCA 90 bp GTCCTTTCCAACTGCATACAGCAGTCTACACCACAAACTCATGTTTaGTTTCATACAATCCCGTGGCTTTCTTGTTCTGCCCCTTTGGGC +
Preference number: 1 (lower is better)
Translates to: VLSNCIQQSTPQTHV*FHTIPWLSCSAPLG
Trigger: GCCCAAAGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAATCAAACATGAGTTTGTGGTGTAGACTGCTGTATGCAGTTGGAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 90 bp ATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACTGCTTTACTGCCTCTCAGATCAGAT +
Preference number: 1 (lower is better)
Translates to: IQGCRVTAAIRTSMF*CTVFITALLPLRSD
Trigger: ATCTGATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR TCA 90 bp TTTAAAGGAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTaGCAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTTTATTTA +
Preference number: 1 (lower is better)
Translates to: FKGEIPCWNQAKGGI*QSSPTTLAYKVLYL
Trigger: TAAATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTCCTTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTGCCTCTGCTGCCACTTaGGCTCACTCTCACGTGTCC +
Preference number: 2 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAASAAT*AHSHVS
Trigger: GGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGC...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTGCCTCTGCTGCCACTTaGGCTCACTCTCACGTGTCC +
Preference number: 2 (lower is better)
Translates to: SWYPDQGGAISSNTASSTASAAT*AHSHVS
Trigger: GGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGC...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTGCCTCTGCTGCCACTTaGGCTCACTCTCACGTGTCC +
Preference number: 2 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLASAAT*AHSHVS
Trigger: GGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGC...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTATATGTCATGGTACCCTaGTCAAGGCGGGGCAATCTC +
Preference number: 2 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLYVMVP*SRRGNL
Trigger: GAGATTGCCCCGCCTTGATCAGGGTACCATGACATA...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAATATGTCATGGTACCCTaGTCAAGGCGGGGCAATCTC +
Preference number: 2 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQYVMVP*SRRGNL
Trigger: GAGATTGCCCCGCCTTGATCAGGGTACCATGACATA...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTCCTACTCATTCAACCTaGCCTTGTCCTTGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAPTHST*PCPWLF
Trigger: GAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGG...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAATTCCAAACTGCCTCTaGTGCCACTTGAGCTCACTC +
Preference number: 2 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLIPNCL*CHLSSL
Trigger: GAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAAT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTACGTGTCCTTTCCAACTaGATACAGCAGTCTACACCA +
Preference number: 2 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLRVLSN*IQQSTP
Trigger: TGGTGTAGACTGCTGTATGCAGTTGGAAAGGACACG...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAATTCCAAACTGCCTCTaGTGCCACTTGAGCTCACTC +
Preference number: 2 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRIPNCL*CHLSSL
Trigger: GAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAAT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAACAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGC +
Preference number: 2 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQQLIPN*LCCHLS
Trigger: GCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTG...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCA +
Preference number: 2 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPPNCLC*HLSSLS
Trigger: TGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCA +
Preference number: 2 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCPNCLC*HLSSLS
Trigger: TGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGG...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAACCCCTCCCTCCATTTaGAGATCTCCAGGGTTAATT +
Preference number: 2 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRTPPSI*RSPGLI
Trigger: AATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTTTTCATACAATCCCGTaGCTTTCTTGTTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAFHTIP*LSCSAP
Trigger: AGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAA...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTATTCCAAACTGCCTCTaGTGCCACTTGAGCTCACTC +
Preference number: 2 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLIPNCL*CHLSSL
Trigger: GAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAAT...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGACACAAGAGGATGTGTaGACACCTCCTACTCATTCA +
Preference number: 2 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLTQEDV*TPPTHS
Trigger: TGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGT...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCCGTGTCCTTTCCAACTaGATACAGCAGTCTACACCA +
Preference number: 2 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCRVLSN*IQQSTP
Trigger: TGGTGTAGACTGCTGTATGCAGTTGGAAAGGACACG...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAACAGCTTCTTCAACTTaGCGCAGCTTATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLTASST*RSLFQT
Trigger: AGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTATTCCAGCCTTTAAAATaGCCTATTCCCCACATGTTA +
Preference number: 2 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLFQPLK*PIPHML
Trigger: TAACATGTGGGGAATAGGGCATTTTAAAGGCTGGAA...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACCCCTCCCTCCATTTaGAGATCTCCAGGGTTAATT +
Preference number: 2 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCTPPSI*RSPGLI
Trigger: AATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGT...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTATGAGAGTAGTGCCATaGAAGAAAAGAGATCCAGTT +
Preference number: 2 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAMRVVP*KKRDPV
Trigger: AACTGGATCTCTTTTCTTCCATGGCACTACTCTCAT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR TCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACACAAGAGGATGTGTaGACACCTCCTACTCATTCA +
Preference number: 2 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCTQEDV*TPPTHS
Trigger: TGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGT...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACGTGTCCTTTCCAACTaGATACAGCAGTCTACACCA +
Preference number: 2 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQRVLSN*IQQSTP
Trigger: TGGTGTAGACTGCTGTATGCAGTTGGAAAGGACACG...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCATCACTGCTTTACTaGCTCTCAGATCAGATGCAC +
Preference number: 2 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKSSLLY*LSDQMH
Trigger: GTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGA...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGATTGTTTCCTCTGAACTaGTTCCAGCCTTTAAAATGC +
Preference number: 2 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRLFPLN*FQPLKC
Trigger: GCATTTTAAAGGCTGGAACCAGTTCAGAGGAAACAA...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTGTCTTCATCACTaGTTTACTGCCTCTCAGATC +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNHCLHH*FTASQI
Trigger: GATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTG...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTTTGCAGAGTCACTGCTaGAATCAGGACTTCAATGTT +
Preference number: 2 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPLQSHC*NQDFNV
Trigger: AACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAA...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACTTTCATACAATCCCGTaGCTTTCTTGTTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNFHTIP*LSCSAP
Trigger: AGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAA...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAACAGCTTCTTCAACTTaGCGCAGCTTATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQTASST*RSLFQT
Trigger: AGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 2 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCT +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNTSMFC*TVFITA
Trigger: AGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGT...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACT +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNRTSMF*CTVFIT
Trigger: AGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCT...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACTTGCAGAGTCACTGCTaGAATCAGGACTTCAATGTT +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNLQSHC*NQDFNV
Trigger: AACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAA...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACAACAACCTAAAGGTTTaGGGTAAACCACAGCACAGA +
Preference number: 2 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNNNLKV*GKPQHR
Trigger: TCTGTGCTGTGGTTTACCCCAAACCTTTAGGTTGTT...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAATGAGAGTAGTGCCATaGAAGAAAAGAGATCCAGTT +
Preference number: 2 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQMRVVP*KKRDPV
Trigger: AACTGGATCTCTTTTCTTCCATGGCACTACTCTCAT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 2 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 2 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAATGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 3 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTAACCTGACCTTGTCCTaGGCTCTTCTCCCTCGGTCT +
Preference number: 3 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQANLTLS*ALLPRS
Trigger: AGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 72 bp CACAGCTTCTTCAACTTGCCGCAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGCTCACTCTCACGTGTC +
Preference number: 3 (lower is better)
Translates to: HSFFNLPQLIPN*LCCHLSSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTCACCCCTCCCTCCATTaGCAGATCTCCAGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAHPSLH*QISRVN
Trigger: ATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGTG...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGATCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 3 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAAATCCCGTGGCTTTCTaGTTCTGCCCCTTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQNPVAF*FCPFGL
Trigger: AAGCCCAAAGGGGCAGAACAAGAAAGCCACGGGATT...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 3 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTTGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 3 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 72 bp TTCAACTTGCCGCAGCTTATTCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCACGTGTCCTTTCCAAC +
Preference number: 3 (lower is better)
Translates to: FNLPQLIPNCLC*HLSSLSRVLSN
Trigger: GTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTGCGGCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACCTCTACCCAAACCCTaGTTTCCTCTGAACTGGTTC +
Preference number: 3 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRPLPKP*FPLNWF
Trigger: GAACCAGTTCAGAGGAAACAAGGGTTTGGGTAGAGG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTAACCTGACCTTGTCCTaGGCTCTTCTCCCTCGGTCT +
Preference number: 3 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPNLTLS*ALLPRS
Trigger: AGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTT...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTATCATTCAACCTGACCTaGTCCTTGGCTCTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLSFNLT*SLALLP
Trigger: AGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGA...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 3 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTAATCCCGTGGCTTTCTaGTTCTGCCCCTTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLNPVAF*FCPFGL
Trigger: AAGCCCAAAGGGGCAGAACAAGAAAGCCACGGGATT...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGCCTCTACCCAAACCCTaGTTTCCTCTGAACTGGTTC +
Preference number: 3 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLPLPKP*FPLNWF
Trigger: GAACCAGTTCAGAGGAAACAAGGGTTTGGGTAGAGG...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTCACCCCTCCCTCCATTaGCAGATCTCCAGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLHPSLH*QISRVN
Trigger: ATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGTG...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACAACCTGACCTTGTCCTaGGCTCTTCTCCCTCGGTCT +
Preference number: 3 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNNLTLS*ALLPRS
Trigger: AGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTT...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR TCA 72 bp GTTGCCTGTTCTTTAACCTTTTATGTCATGGTACCCTaGTCAAGGCGGGGCAATCTCGTCCAACACAGCTTC +
Preference number: 3 (lower is better)
Translates to: VACSLTFYVMVP*SRRGNLVQHSF
Trigger: GAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGACATAAAAGGTTAAAGAACAGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 72 bp CAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTaGTTTACTGCCTCTCAGATCAGATGCACGCCACTA +
Preference number: 3 (lower is better)
Translates to: QDFNVLLHCLHH*FTASQIRCTPL
Trigger: TAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 72 bp TGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACTGCTTTACTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: CRVTAAIRTSMF*CTVFITALLPL
Trigger: GAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACTCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 3 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 3 (lower is better)
Translates to: QGGAISSNTASSTCRSLFTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACCCCTCCCTCCATTaGCAGATCTCCAGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNHPSLH*QISRVN
Trigger: ATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGTG...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 3 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCCACAGCTTCTTCAACTaGCCGCAGCTTATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCHSFFN*PQLIPN
Trigger: GTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACTCATTCAACCTGACCTaGTCCTTGGCTCTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNSFNLT*SLALLP
Trigger: AGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGA...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTATAATTTATCCAAGGTaGCAGAGTCACTGCTGCAAT +
Preference number: 3 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAIIYPR*QSHCCN
Trigger: ATTGCAGCAGTGACTCTGCAACCTTGGATAAATTAT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR GCA 72 bp AGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCTTTACTGCCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: RVTAAIRTSMFC*TVFITALLPLR
Trigger: TCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACAGCTTCTTCAACTaGCCGCAGCTTATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNHSFFN*PQLIPN
Trigger: GTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAAACTTAAGTGCTCATaGTGTTGCCTGTTCTTTAAC +
Preference number: 3 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLKLKCS*CCLFFN
Trigger: GTTAAAGAACAGGCAACACAATGAGCACTTAAGTTT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 3 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR-3UTR CAA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAAAACTTAAGTGCTCATaGTGTTGCCTGTTCTTTAAC +
Preference number: 3 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQKLKCS*CCLFFN
Trigger: GTTAAAGAACAGGCAACACAATGAGCACTTAAGTTT...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR TCA 72 bp GAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTaGCAAAGCAGCCCAACCACTTTGGCTTACAAAGTC +
Preference number: 3 (lower is better)
Translates to: EIPCWNQAKGGI*QSSPTTLAYKV
Trigger: GACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTGCGAGACGCTCGCCCTaGCCTCCGACCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTARRSP*PPTPAA
Trigger: CGCTGCAGGGGTCGGAGGTCAGGGCGAGCGTCTCGC...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR TCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAGCGAGACGCTCGCCCTaGCCTCCGACCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQARRSP*PPTPAA
Trigger: CGCTGCAGGGGTCGGAGGTCAGGGCGAGCGTCTCGC...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR GCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTCTTCCTCCTACGGCCTaGGAGACGCTCGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTLPPTA*ETLALT
Trigger: GGTCAGGGCGAGCGTCTCGCAGGCCGTAGGAGGAAG...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR TCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACCCCTGCAGCGAGCATaGGCACTAAGTCTCTCGCGA +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRPLQRA*ALSLSR
Trigger: TCGCGAGAGACTTAGTGCTCATGCTCGCTGCAGGGG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCTTCCTCCTACGGCCTaGGAGACGCTCGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPLPPTA*ETLALT
Trigger: GGTCAGGGCGAGCGTCTCGCAGGCCGTAGGAGGAAG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR TCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTCCCCTGCAGCGAGCATaGGCACTAAGTCTCTCGCGA +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLPLQRA*ALSLSR
Trigger: TCGCGAGAGACTTAGTGCTCATGCTCGCTGCAGGGG...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS-3UTR TCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTGCCTCTGCTGCCACTTaGGCTCACTCTCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPASAAT*AHSHVS
Trigger: GGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGC...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAPNCLC*HLSSLS
Trigger: TGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGG...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTGCCTCTGCTGCCACTTGAGCTCACTCTCACGTGTCCTTTCCAACTGCATACACAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPLLPLELTLTCPFQLHTQLIPN*LCCHLS
Trigger: GCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTG...TGTATGCAGTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAAACTCGTCCATTCGGTaGTGGCGGCCGTTATTGGTG +
Preference number: 4 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQNSSIR*WRPLLV
Trigger: CACCAATAACGGCCGCCACCACCGAATGGACGAGTT...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGGGCCGTTATTGGTGGTaGAGACCCGTAGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLGRYWW*RPVATV
Trigger: CACTGTTGCTACGGGTCTTCACCACCAATAACGGCC...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACGCCTCTGCTGCCACTTaGGCTCACTCTCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNASAAT*AHSHVS
Trigger: GGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGC...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTGCCTCTGCTGCCACTTGAGCTCACTCTCACGTGTCCTTTCCAACTGCATACACGTGTCCTTTCCAACTaGATACAGCAGTCTACACCA +
Preference number: 4 (lower is better)
Translates to: LPLLPLELTLTCPFQLHTRVLSN*IQQSTP
Trigger: TGGTGTAGACTGCTGTATGCAGTTGGAAAGGACACG...TGTATGCAGTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTACCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLPNCLC*HLSSLS
Trigger: TGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGG...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAGCCTCTCAGATCAGATaGACGCCACTACCTAGCACA +
Preference number: 4 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQASQIR*TPLPST
Trigger: TGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGC...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRQLIPN*LCCHLS
Trigger: GCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTACCCCTCCCTCCATTTaGAGATCTCCAGGGTTAATT +
Preference number: 4 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQATPPSI*RSPGLI
Trigger: AATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCTTTCATACAATCCCGTaGCTTTCTTGTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QGGAISSNTASSTCRSLFFHTIP*LSCSAP
Trigger: AGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAA...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTTATGTCATGGTACCCTaGTCAAGGCGGGGCAATCTC +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPYVMVP*SRRGNL
Trigger: GAGATTGCCCCGCCTTGATCAGGGTACCATGACATA...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTTATGTCATGGTACCCTaGTCAAGGCGGGGCAATCTC +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLYVMVP*SRRGNL
Trigger: GAGATTGCCCCGCCTTGATCAGGGTACCATGACATA...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAACACAAGAGGATGTGTaGACACCTCCTACTCATTCA +
Preference number: 4 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLTQEDV*TPPTHS
Trigger: TGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACGTGTCCTTTCCAACTaGATACAGCAGTCTACACCA +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRRVLSN*IQQSTP
Trigger: TGGTGTAGACTGCTGTATGCAGTTGGAAAGGACACG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTCCAAACTGCCTCTGCTaGCACTTGAGCTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLPNCLC*HLSSLS
Trigger: TGAGAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGG...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCACAGCTTCTTCAACTTaGCGCAGCTTATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: QGGAISSNTASSTCRSLFTASST*RSLFQT
Trigger: AGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGT...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTGCCTCTCAGATCAGATaGACGCCACTACCTAGCACA +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLASQIR*TPLPST
Trigger: TGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGC...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTCATCACTGCTTTACTaGCTCTCAGATCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTSSLLY*LSDQMH
Trigger: GTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGA...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTACACTGTCTTCATCACTaGTTTACTGCCTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLHCLHH*FTASQI
Trigger: GATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTG...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTAGGTTGCAGAGTCACTaGTGCAATCAGGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQARLQSH*CNQDFN
Trigger: ATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACAACTCGTCCATTCGGTaGTGGCGGCCGTTATTGGTG +
Preference number: 4 (lower is better)
Translates to: RNSMLEPSKGWNLTKQPNNSSIR*WRPLLV
Trigger: CACCAATAACGGCCGCCACCACCGAATGGACGAGTT...GTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCCTACTCATTCAACCTaGCCTTGTCCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPPTHST*PCPWLF
Trigger: GAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp CATCACTGCTTTACTGCCTCTCAGATCAGATGCACGCCACTACCTAGCACACAAACACAAGAGGATGTGTaGACACCTCCTACTCATTCA +
Preference number: 4 (lower is better)
Translates to: HHCFTASQIRCTPLPSTQTQEDV*TPPTHS
Trigger: TGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGT...TTGTGTGCTAGGTAGTGGCGTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGGCAAAGGGTGGAATTTaGCAAAGCAGCCCAACCACT +
Preference number: 4 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKAKGGI*QSSPTT
Trigger: AGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGC...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTGCAAAGGGTGGAATTTaGCAAAGCAGCCCAACCACT +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLAKGGI*QSSPTT
Trigger: AGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGC...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGATTCCAAACTGCCTCTaGTGCCACTTGAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKIPNCL*CHLSSL
Trigger: GAGTGAGCTCAAGTGGCAGCAGAGGCAGTTTGGAAT...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCAGCTTATTCCAAACTaGCTCTGCTGCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPQLIPN*LCCHLS
Trigger: GCTCAAGTGGCAGCAGAGGCAGTTTGGAATAAGCTG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCTTCCAGCCTTTAAAATaGCCTATTCCCCACATGTTA +
Preference number: 4 (lower is better)
Translates to: QGGAISSNTASSTCRSLFFQPLK*PIPHML
Trigger: TAACATGTGGGGAATAGGGCATTTTAAAGGCTGGAA...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTATCATCACTGCTTTACTaGCTCTCAGATCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLSSLLY*LSDQMH
Trigger: GTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGA...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTACACTGTCTTCATCACTaGTTTACTGCCTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLHCLHH*FTASQI
Trigger: GATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTG...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACACTGTCTTCATCACTaGTTTACTGCCTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRHCLHH*FTASQI
Trigger: GATCTGAGAGGCAGTAAAGCAGTGATGAAGACAGTG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQARTSMF*CTVFIT
Trigger: AGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAGGTTGCAGAGTCACTaGTGCAATCAGGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLRLQSH*CNQDFN
Trigger: ATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTATTTCATACAATCCCGTaGCTTTCTTGTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLFHTIP*LSCSAP
Trigger: AGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAA...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCTTGTTTCCTCTGAACTaGTTCCAGCCTTTAAAATGC +
Preference number: 4 (lower is better)
Translates to: QGGAISSNTASSTCRSLFLFPLN*FQPLKC
Trigger: GCATTTTAAAGGCTGGAACCAGTTCAGAGGAAACAA...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAACAACCTAAAGGTTTaGGGTAAACCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLNNLKV*GKPQHR
Trigger: TCTGTGCTGTGGTTTACCCCAAACCTTTAGGTTGTT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCTACTCATTCAACCTaGCCTTGTCCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQPTHST*PCPWLF
Trigger: GAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGG...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAGCAAAGGGTGGAATTTaGCAAAGCAGCCCAACCACT +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQAKGGI*QSSPTT
Trigger: AGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGC...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAACAGCTTCTTCAACTTaGCGCAGCTTATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRTASST*RSLFQT
Trigger: AGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTATTGCAGAGTCACTGCTaGAATCAGGACTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLLQSHC*NQDFNV
Trigger: AACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAA...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGATTGCAGAGTCACTGCTaGAATCAGGACTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRLQSHC*NQDFNV
Trigger: AACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAA...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTCCTACCCTCTTCATCTaGATAGTAAATCATAGGGTT +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTPTLFI*IVNHRV
Trigger: AACCCTATGATTTACTATGCAGATGAAGAGGGTAGG...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTTTGTTTCCTCTGAACTaGTTCCAGCCTTTAAAATGC +
Preference number: 4 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQALFPLN*FQPLKC
Trigger: GCATTTTAAAGGCTGGAACCAGTTCAGAGGAAACAA...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTATGAGAGTAGTGCCATaGAAGAAAAGAGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTMRVVP*KKRDPV
Trigger: AACTGGATCTCTTTTCTTCCATGGCACTACTCTCAT...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAATGAGAGTAGTGCCATaGAAGAAAAGAGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLMRVVP*KKRDPV
Trigger: AACTGGATCTCTTTTCTTCCATGGCACTACTCTCAT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAACAACCTAAAGGTTTaGGGTAAACCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLNNLKV*GKPQHR
Trigger: TCTGTGCTGTGGTTTACCCCAAACCTTTAGGTTGTT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAACCCCTCCCTCCATTTaGAGATCTCCAGGGTTAATT +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQTPPSI*RSPGLI
Trigger: AATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTTCATCACTGCTTTACTaGCTCTCAGATCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLSSLLY*LSDQMH
Trigger: GTGCATCTGATCTGAGAGGCAGTAAAGCAGTGATGA...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLTSMFC*TVFITA
Trigger: AGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGT...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLRTSMF*CTVFIT
Trigger: AGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCT...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACCTACCCTCTTCATCTaGATAGTAAATCATAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRPTLFI*IVNHRV
Trigger: AACCCTATGATTTACTATGCAGATGAAGAGGGTAGG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAATGAGAGTAGTGCCATaGAAGAAAAGAGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRMRVVP*KKRDPV
Trigger: AACTGGATCTCTTTTCTTCCATGGCACTACTCTCAT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR TCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAACACAAGAGGATGTGTaGACACCTCCTACTCATTCA +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQTQEDV*TPPTHS
Trigger: TGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGACAGCTTCTTCAACTTaGCGCAGCTTATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKTASST*RSLFQT
Trigger: AGTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGT...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: SWYPDQGGAISSNTASSTKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGTTCCAGCCTTTAAAATaGCCTATTCCCCACATGTTA +
Preference number: 4 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLFQPLK*PIPHML
Trigger: TAACATGTGGGGAATAGGGCATTTTAAAGGCTGGAA...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPTSMFC*TVFITA
Trigger: AGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGT...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCAGGACTTCAATGTTCTaGTGCACTGTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCRTSMF*CTVFIT
Trigger: AGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCT...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAAGGTTGCAGAGTCACTaGTGCAATCAGGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQRLQSH*CNQDFN
Trigger: ATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTGCAGCCCAACCACTTTaGCTTACAAAGTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPAAQPL*LTKSFI
Trigger: AATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGC...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCGCAGCCCAACCACTTTaGCTTACAAAGTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCAAQPL*LTKSFI
Trigger: AATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGC...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCCCTACCCTCTTCATCTaGATAGTAAATCATAGGGTT +
Preference number: 4 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCPTLFI*IVNHRV
Trigger: AACCCTATGATTTACTATGCAGATGAAGAGGGTAGG...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
3UTR CAA 72 bp AGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTaGACAAAGCAGCCCAACCACTTTGGCTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: RNSMLEPSKGWN*TKQPNHFGLQS
Trigger: ACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAATTCCAGCCTTTAAAATaGCCTATTCCCCACATGTTA +
Preference number: 4 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQFQPLK*PIPHML
Trigger: TAACATGTGGGGAATAGGGCATTTTAAAGGCTGGAA...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CCA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTTTTCATACAATCCCGTaGCTTTCTTGTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CSQASINFHTQADYTHIFFHTIP*LSCSAP
Trigger: AGGGGCAGAACAAGAAAGCCACGGGATTGTATGAAA...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTACTTCAATGTTCTGCTaGACTGTCTTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: CSQASINFHTQADYTHIFTSMFC*TVFITA
Trigger: AGCAGTGATGAAGACAGTGCAGCAGAACATTGAAGT...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTTTGCAGAGTCACTGCTaGAATCAGGACTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: CSQASINFHTQADYTHIFLQSHC*NQDFNV
Trigger: AACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAA...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR GCA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTAAGTGCTCATTGTGTTaGCTGTTCTTTAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: CSQASINFHTQADYTHIFKCSLC*LFFNLL
Trigger: TAAAAGGTTAAAGAACAGGCAACACAATGAGCACTT...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS GCA 90 bp CTGAGGGAGAGAGAAAACGGAAGGGCAGAAGTTAAAAACACCAGCTaGGAACCCGGAGCTCATCTCTCTTCCCGAGGCGTTGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LRERENGRAEVKNTS*EPGAHLSSRGVAAS
Trigger: GGAGGCCGCAACGCCTCGGGAAGAGAGATGAGCTCCGGGTTCGCAGCTGGTGTTTTTAACTTCTGCCCTTCCGTTTTCTCTCTCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450573.5
CDS-3UTR CAA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCTGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: QGGAISSNTASSTCRSLFCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTATGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTGCCTCTGCTGCCACTTGAGCTCACTCTCACGTGTCCTTTCCAACTGCATACAAACCTGACCTTGTCCTaGGCTCTTCTCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: LPLLPLELTLTCPFQLHTNLTLS*ALLPRS
Trigger: AGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTT...TGTATGCAGTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTATCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 5 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 5 (lower is better)
Translates to: SWYPDQGGAISSNTASSTSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CACCTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAATCCCGTGGCTTTCTaGTTCTGCCCCTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: HLLLIQPDLVLGSSPSVLNPVAF*FCPFGL
Trigger: AAGCCCAAAGGGGCAGAACAAGAAAGCCACGGGATT...TAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTCACCCCTCCCTCCATTaGCAGATCTCCAGGGTTAAT +
Preference number: 5 (lower is better)
Translates to: SWYPDQGGAISSNTASSTHPSLH*QISRVN
Trigger: ATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGTG...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAACCTGACCTTGTCCTaGGCTCTTCTCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLNLTLS*ALLPRS
Trigger: AGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TTTATCCAAGGTTGCAGAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCTGCCTCTGCTGCCACTaGAGCTCACTCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: FIQGCRVTAAIRTSMFCCCLCCH*SSLSRV
Trigger: GACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCA...GCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTCTGCAACCTTGGATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTCCTCTACCCAAACCCTaGTTTCCTCTGAACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SWYPDQGGAISSNTASSTPLPKP*FPLNWF
Trigger: GAACCAGTTCAGAGGAAACAAGGGTTTGGGTAGAGG...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACACCCCTCCCTCCATTaGCAGATCTCCAGGGTTAAT +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRHPSLH*QISRVN
Trigger: ATTAACCCTGGAGATCTGCAAATGGAGGGAGGGGTG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAGGCTGGTCTCTGCCATaGCTAACAGGGACACCAATT +
Preference number: 5 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLGWSLP*LTGTPI
Trigger: AATTGGTGTCCCTGTTAGCAATGGCAGAGACCAGCC...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAGCTTATTCAGGAGAAATTCCATGTaGGAACCAAGCAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: QGGAISSNTASSTCRSLFRRNSM*EPSKGW
Trigger: CCACCCTTTGCTTGGTTCCAACATGGAATTTCTCCT...GAATAAGCTGCGGCAAGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGATCATTCAACCTGACCTaGTCCTTGGCTCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRSFNLT*SLALLP
Trigger: AGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGA...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp GAGTCACTGCTGCAATCAGGACTTCAATGTTCTGCTGCACTGTCTTCATCACTGGGCTGGTCTCTGCCATaGCTAACAGGGACACCAATT +
Preference number: 5 (lower is better)
Translates to: ESLLQSGLQCSAALSSSLGWSLP*LTGTPI
Trigger: AATTGGTGTCCCTGTTAGCAATGGCAGAGACCAGCC...CAGTGATGAAGACAGTGCAGCAGAACATTGAAGTCCTGATTGCAGCAGTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAAGCAAAGGGTGGAATTaGACAAAGCAGCCCAACCAC +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRSKGWN*TKQPNH
Trigger: GTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAGCAAAGGGTGGAATTaGACAAAGCAGCCCAACCAC +
Preference number: 5 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLSKGWN*TKQPNH
Trigger: GTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTAGGAGAAATTCCATGTaGGAACCAAGCAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: SWYPDQGGAISSNTASSTRRNSM*EPSKGW
Trigger: CCACCCTTTGCTTGGTTCCAACATGGAATTTCTCCT...AGTTGAAGAAGCTGTGTTGGACGAGATTGCCCCGCCTTGATCAGGGTACCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTTCTTGTTCTGCCCCTTaGGGCTTAACCATACGCTCC +
Preference number: 5 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLSCSAP*GLTIRS
Trigger: GGAGCGTATGGTTAAGCCCAAAGGGGCAGAACAAGA...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGACACAGCTTCTTCAACTaGCCGCAGCTTATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRHSFFN*PQLIPN
Trigger: GTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGGGCTGGTCTCTGCCATaGCTAACAGGGACACCAATT +
Preference number: 5 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKGWSLP*LTGTPI
Trigger: AATTGGTGTCCCTGTTAGCAATGGCAGAGACCAGCC...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTAGCAGCCCAACCACTTaGGCTTACAAAGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQASSPTT*AYKVLY
Trigger: ATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGCT...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAAGGAGAAATTCCATGTaGGAACCAAGCAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRRRNSM*EPSKGW
Trigger: CCACCCTTTGCTTGGTTCCAACATGGAATTTCTCCT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS CCA 90 bp CCAAGTGGAGAAATGAAATTGAAATCAGGGAGAATAACTCTACACTaGCAAAGGCAATTAACTGTTGTTCCAGGTTCCCGGCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSGEMKLKSGRITLH*QRQLTVVPGSRPGS
Trigger: GGACCCGGGCCGGGAACCTGGAACAACAGTTAATTGCCTTTGCCAGTGTAGAGTTATTCTCCCTGATTTCAATTTCATTTCTCCACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS-3UTR CAA 90 bp CTGCCTCTGCTGCCACTTGAGCTCACTCTCACGTGTCCTTTCCAACTGCATACAACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 5 (lower is better)
Translates to: LPLLPLELTLTCPFQLHTTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...TGTATGCAGTTGGAAAGGACACGTGAGAGTGAGCTCAAGTGGCAGCAGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCCTCTACCCAAACCCTaGTTTCCTCTGAACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPPLPKP*FPLNWF
Trigger: GAACCAGTTCAGAGGAAACAAGGGTTTGGGTAGAGG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCATTCAACCTGACCTaGTCCTTGGCTCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKSFNLT*SLALLP
Trigger: AGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGA...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAAGCAGCCCAACCACTTaGGCTTACAAAGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRSSPTT*AYKVLY
Trigger: ATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGCT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTAGCAAAGGGTGGAATTaGACAAAGCAGCCCAACCAC +
Preference number: 5 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLSKGWN*TKQPNH
Trigger: GTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGTCCTCACAGCTTCTTCAACTaGCCGCAGCTTATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SKGWNLTKQPNHFGLQSPHSFFN*PQLIPN
Trigger: GTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG...AGGACTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACACAGCTTCTTCAACTaGCCGCAGCTTATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQHSFFN*PQLIPN
Trigger: GTTTGGAATAAGCTGCGGCAAGTTGAAGAAGCTGTG...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp CTCCTACTCATTCAACCTGACCTTGTCCTTGGCTCTTCTCCCTCGGTCTTAAGAATAATTTATCCAAGGTaGCAGAGTCACTGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: LLLIQPDLVLGSSPSVLRIIYPR*QSHCCN
Trigger: ATTGCAGCAGTGACTCTGCAACCTTGGATAAATTAT...TCTTAAGACCGAGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGAGTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AAGGTTTGGGGTAAACCACAGCACAGAAGAAGCACCAGATCTAGGCTCCAGGCTTTTATTGTTTCTCATTaGTCAGGCACCATTCTAAGC +
Preference number: 5 (lower is better)
Translates to: KVWGKPQHRRSTRSRLQAFIVSH*SGTILS
Trigger: GCTTAGAATGGTGCCTGACAAATGAGAAACAATAAA...AGCCTGGAGCCTAGATCTGGTGCTTCTTCTGTGCTGTGGTTTACCCCAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTAAAACTTAAGTGCTCATaGTGTTGCCTGTTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLKLKCS*CCLFFN
Trigger: GTTAAAGAACAGGCAACACAATGAGCACTTAAGTTT...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTTCATTCAACCTGACCTaGTCCTTGGCTCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: CSQASINFHTQADYTHIFSFNLT*SLALLP
Trigger: AGGGAGAAGAGCCAAGGACAAGGTCAGGTTGAATGA...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp AGATCAGATGCACGCCACTACCTAGCACACAAGAGGATGTGTGAACACCTCCTATTTATTGTTTCTCATTaGTCAGGCACCATTCTAAGC +
Preference number: 5 (lower is better)
Translates to: RSDARHYLAHKRMCEHLLFIVSH*SGTILS
Trigger: GCTTAGAATGGTGCCTGACAAATGAGAAACAATAAA...TAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTAGTGGCGTGCATCTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAAGCAGCCCAACCACTTaGGCTTACAAAGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQSSPTT*AYKVLY
Trigger: ATAAAGGACTTTGTAAGCCAAAGTGGTTGGGCTGCT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp ACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAACCACTTTGGCTTACAAAGATAATTTATCCAAGGTaGCAGAGTCACTGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: TKQRVEFDKAAQPLWLTKIIYPR*QSHCCN
Trigger: ATTGCAGCAGTGACTCTGCAACCTTGGATAAATTAT...CTTTGTAAGCCAAAGTGGTTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS CCA 90 bp ACAAAAACTTCTAACTTCCTGAAAGCTGAGTCCGAAGGCCCCAAGTaGAGAAATGAAATTGAAATCAGGGAGAATAACTCTACACTGGCA +
Preference number: 5 (lower is better)
Translates to: TKTSNFLKAESEGPK*RNEIEIRENNSTLA
Trigger: TGCCAGTGTAGAGTTATTCTCCCTGATTTCAATTTCATTTCTCCACTTGGGGCCTTCGGACTCAGCTTTCAGGAAGTTAGAAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS-3UTR CAA 90 bp GAGAAATTCCATGTTGGAACCAAGCAAAGGGTGGAATTTGACAAAGCAGCCCAAACCACAAACTCATGTTaGATTTCATACAATCCCGTG +
Preference number: 5 (lower is better)
Translates to: EKFHVGTKQRVEFDKAAQTTNSC*ISYNPV
Trigger: CACGGGATTGTATGAAATCAAACATGAGTTTGTGGT...TTGGGCTGCTTTGTCAAATTCCACCCTTTGCTTGGTTCCAACATGGAATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTAAACTTAAGTGCTCATaGTGTTGCCTGTTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLKLKCS*CCLFFN
Trigger: GTTAAAGAACAGGCAACACAATGAGCACTTAAGTTT...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS-3UTR CAA 90 bp TACCTAGCACACAAGAGGATGTGTGAACACCTCCTACTCATTCAACCTGACCTTTTTATTGTTTCTCATTaGTCAGGCACCATTCTAAGC +
Preference number: 5 (lower is better)
Translates to: YLAHKRMCEHLLLIQPDLFIVSH*SGTILS
Trigger: GCTTAGAATGGTGCCTGACAAATGAGAAACAATAAA...AAGGTCAGGTTGAATGAGTAGGAGGTGTTCACACATCCTCTTGTGTGCTAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS GCA 90 bp TTAGTGCTAAAAGGGACTTCAGAGATTCTATATGCTATCTTCTGTTaGTACACAACACCTTATGGCCTAGTGATTTACCTAAGGGTAACT +
Preference number: 5 (lower is better)
Translates to: LVLKGTSEILYAIFC*YTTPYGLVIYLRVT
Trigger: AGTTACCCTTAGGTAAATCACTAGGCCATAAGGTGTTGTGTAGCAACAGAAGATAGCATATAGAATCTCTGAAGTCCCTTTTAGCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS-3UTR CAA 90 bp TGTTCCCAGGCCTCCATTAACTTTCACACTCAGGCTGATTACACACATATATTTAAACTTAAGTGCTCATaGTGTTGCCTGTTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: CSQASINFHTQADYTHIFKLKCS*CCLFFN
Trigger: GTTAAAGAACAGGCAACACAATGAGCACTTAAGTTT...AAATATATGTGTGTAATCAGCCTGAGTGTGAAAGTTAATGGAGGCCTGGGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382533.8
ENST00000607003.5
ENST00000621421.4
CDS CCA 90 bp TATTTTTCACTTTTGGTGCTTTGGTACCTAAGGCTTAATATTATGTaGAAATGCTCTTTGAGAATAACAAATACCACTCGACAGCATCAC +
Preference number: 5 (lower is better)
Translates to: YFSLLVLWYLRLNIM*KCSLRITNTTRQHH
Trigger: GTGATGCTGTCGAGTGGTATTTGTTATTCTCAAAGAGCATTTCCACATAATATTAAGCCTTAGGTACCAAAGCACCAAAAGTGAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS TCA 72 bp GCCATCTTCCTCCTACGGCCTGCGAGACGCTCGCCCTaGCCTCCGACCCCTGCAGCGAGCATGAGCACTAAG +
Preference number: 6 (lower is better)
Translates to: AIFLLRPARRSP*PPTPAASMSTK
Trigger: CTTAGTGCTCATGCTCGCTGCAGGGGTCGGAGGTCAGGGCGAGCGTCTCGCAGGCCGTAGGAGGAAGATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS TCA 72 bp GACGCTCGCCCTGACCTCCGACCCCTGCAGCGAGCATaGGCACTAAGTCTCTCGCGAGGAGAAGCTCGACAC +
Preference number: 6 (lower is better)
Translates to: DARPDLRPLQRA*ALSLSRGEARH
Trigger: GTGTCGAGCTTCTCCTCGCGAGAGACTTAGTGCTCATGCTCGCTGCAGGGGTCGGAGGTCAGGGCGAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382533.8
ENST00000621421.4
CDS CAA 72 bp AAGCTGAGTCCGAAGGCCCCAAGTGGAGAAATGAAATaGAAATCAGGGAGAATAACTCTACACTGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: KLSPKAPSGEMK*KSGRITLHWQR
Trigger: CCTTTGCCAGTGTAGAGTTATTCTCCCTGATTTCAATTTCATTTCTCCACTTGGGGCCTTCGGACTCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS CAA 72 bp CTTTTGTACCTAGCAGCCATAACAGTGACAGCAATCTaGGGTCTGTCCATTCTTAACCGCCCAAAAGTTGCA +
Preference number: 6 (lower is better)
Translates to: LLYLAAITVTAI*GLSILNRPKVA
Trigger: TGCAACTTTTGGGCGGTTAAGAATGGACAGACCCAAGATTGCTGTCACTGTTATGGCTGCTAGGTACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS CCA 72 bp TCTAACTTCCTGAAAGCTGAGTCCGAAGGCCCCAAGTaGAGAAATGAAATTGAAATCAGGGAGAATAACTCT +
Preference number: 6 (lower is better)
Translates to: SNFLKAESEGPK*RNEIEIRENNS
Trigger: AGAGTTATTCTCCCTGATTTCAATTTCATTTCTCCACTTGGGGCCTTCGGACTCAGCTTTCAGGAAGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS CAA 90 bp TACCTATCACTTTTGTACCTAGCAGCCATAACAGTGACAGCAATCTaGGGTCTGTCCATTCTTAACCGCCCAAAAGTTGCAACATTAATC +
Preference number: 6 (lower is better)
Translates to: YLSLLYLAAITVTAI*GLSILNRPKVATLI
Trigger: GATTAATGTTGCAACTTTTGGGCGGTTAAGAATGGACAGACCCAAGATTGCTGTCACTGTTATGGCTGCTAGGTACAAAAGTGATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS CAA 90 bp CTTAGTGCTAAAAGGGACTTCAGAGATTCTATATGCTATCTTCTGTaGCTACACAACACCTTATGGCCTAGTGATTTACCTAAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: LSAKRDFRDSICYLL*LHNTLWPSDLPKGN
Trigger: GTTACCCTTAGGTAAATCACTAGGCCATAAGGTGTTGTGTAGCAACAGAAGATAGCATATAGAATCTCTGAAGTCCCTTTTAGCACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS CAA 90 bp TTGGTGCTTTGGTACCTAAGGCTTAATATTATGTGGAAATGCTCTTaGAGAATAACAAATACCACTCGACAGCATCACTCTCCCTTACCA +
Preference number: 6 (lower is better)
Translates to: LVLWYLRLNIMWKCS*RITNTTRQHHSPLP
Trigger: TGGTAAGGGAGAGTGATGCTGTCGAGTGGTATTTGTTATTCTCAAAGAGCATTTCCACATAATATTAAGCCTTAGGTACCAAAGCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS GCA 72 bp AAAGGGACTTCAGAGATTCTATATGCTATCTTCTGTTaGTACACAACACCTTATGGCCTAGTGATTTACCTA +
Preference number: 6 (lower is better)
Translates to: KGTSEILYAIFC*YTTPYGLVIYL
Trigger: TAGGTAAATCACTAGGCCATAAGGTGTTGTGTAGCAACAGAAGATAGCATATAGAATCTCTGAAGTCCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS CAA 72 bp AAAAGGGACTTCAGAGATTCTATATGCTATCTTCTGTaGCTACACAACACCTTATGGCCTAGTGATTTACCT +
Preference number: 6 (lower is better)
Translates to: KRDFRDSICYLL*LHNTLWPSDLP
Trigger: AGGTAAATCACTAGGCCATAAGGTGTTGTGTAGCAACAGAAGATAGCATATAGAATCTCTGAAGTCCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS CAA 72 bp GGCAGATACTACAACATATTTATCTACCTATCACTTTaGTACCTAGCAGCCATAACAGTGACAGCAATCTTG +
Preference number: 6 (lower is better)
Translates to: GRYYNIFIYLSL*YLAAITVTAIL
Trigger: CAAGATTGCTGTCACTGTTATGGCTGCTAGGTACAAAAGTGATAGGTAGATAAATATGTTGTAGTATCTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS GCA 72 bp CTATTTGCCTCCAAAAACTCCATGTACCAGCCTTACTaGTGGAAATTTCAATTAATTAGACTCTTAGTGCTA +
Preference number: 6 (lower is better)
Translates to: LFASKNSMYQPY*WKFQLIRLLVL
Trigger: TAGCACTAAGAGTCTAATTAATTGAAATTTCCAGCAGTAAGGCTGGTACATGGAGTTTTTGGAGGCAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS CAA 72 bp TGGTACCTAAGGCTTAATATTATGTGGAAATGCTCTTaGAGAATAACAAATACCACTCGACAGCATCACTCT +
Preference number: 6 (lower is better)
Translates to: WYLRLNIMWKCS*RITNTTRQHHS
Trigger: AGAGTGATGCTGTCGAGTGGTATTTGTTATTCTCAAAGAGCATTTCCACATAATATTAAGCCTTAGGTACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485646.1
CDS CCA 72 bp TTTGCCTCCAAAAACTCCATGTACCAGCCTTACTGCTaGAAATTTCAATTAATTAGACTCTTAGTGCTAAAA +
Preference number: 6 (lower is better)
Translates to: FASKNSMYQPYC*KFQLIRLLVLK
Trigger: TTTTAGCACTAAGAGTCTAATTAATTGAAATTTCCAGCAGTAAGGCTGGTACATGGAGTTTTTGGAGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471009.1
CDS CCA 72 bp CTTTTGGTGCTTTGGTACCTAAGGCTTAATATTATGTaGAAATGCTCTTTGAGAATAACAAATACCACTCGA +
Preference number: 6 (lower is better)
Translates to: LLVLWYLRLNIM*KCSLRITNTTR
Trigger: TCGAGTGGTATTTGTTATTCTCAAAGAGCATTTCCACATAATATTAAGCCTTAGGTACCAAAGCACCAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485646.1