RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAP130 (Homo sapiens)

Ensembl gene IDs: ENSG00000136715

Ensembl transcript IDs: ENST00000259234.10, ENST00000259235.7, ENST00000357702.9, ENST00000424298.5, ENST00000450957.1, ENST00000643581.2

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGA +
Preference number: 1 (lower is better)
Translates to: VAARLVPWHCCKRPT*AFEGQAEEPNGVGG
Trigger: TCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR TCA 90 bp GTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCAC +
Preference number: 1 (lower is better)
Translates to: VHPNARRQLTMSSQL*SFHALGCHGFLCFH
Trigger: GTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 90 bp AAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTaGTGGACACTGATGCATCCGGAGTCACTTATGACACAGATCAGG +
Preference number: 1 (lower is better)
Translates to: KAEKHQPAILVIASN*WTLMHPESLMTQIR
Trigger: CCTGATCTGTGTCATAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 90 bp GCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTaGACACTGATGCATCCGGAGTCACTTATGACACAGATCAGGTTT +
Preference number: 1 (lower is better)
Translates to: AEKHQPAILVIASNW*TLMHPESLMTQIRF
Trigger: AAACCTGATCTGTGTCATAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR GCA 90 bp AATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAACCCAGTTCTGACACACGCAAGACA +
Preference number: 1 (lower is better)
Translates to: NVLQNKDLRATYGVA*SEPPQKPSSDTRKT
Trigger: TGTCTTGCGTGTGTCAGAACTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 90 bp AAAATGACAAGAACTAATAGTTCAAACCCTTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACAT +
Preference number: 1 (lower is better)
Translates to: KMTRTNSSNPLECEM*QLAWCRGTAVKGQH
Trigger: ATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGAACTATTAGTTCTTGTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 90 bp AGTACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTaGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAGA +
Preference number: 1 (lower is better)
Translates to: STKTSLSPLLTSGDV*YIQLTASHQLQKYR
Trigger: TCTGTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
3UTR-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGMSSQL*SFHALG
Trigger: TCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACAT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCCAACTGGTGGACACTaGTGCATCCGGAGTCACTTA +
Preference number: 2 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFPTGGH*CIRSHL
Trigger: TAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 2 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCCAACTGGTGGACACTaGTGCATCCGGAGTCACTTA +
Preference number: 2 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGPTGGH*CIRSHL
Trigger: TAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CAA 90 bp GAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAC +
Preference number: 2 (lower is better)
Translates to: EGSSLCPVSSDPFTP*DVMGSSAFTRELRN
Trigger: GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACATAGTGAGCTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 2 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 2 (lower is better)
Translates to: EKHQPAILVIASNWWTLMRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIMSSQL*SFHALG
Trigger: TCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACAT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 2 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 2 (lower is better)
Translates to: EKHQPAILVIASNWWTLMCHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 2 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFICHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 2 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGGTGTTGCCTGCTCTaGACCTCCACAAAAACCCAG +
Preference number: 2 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYWCCLL*TSTKTQ
Trigger: CTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 2 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 2 (lower is better)
Translates to: VWRCVVHTINSITPATEVRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 2 (lower is better)
Translates to: QITKNVLQNKDLRATYGVMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYLECEM*QLAWCR
Trigger: ACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 2 (lower is better)
Translates to: SINRKAEKHQPAILVIASIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 2 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 2 (lower is better)
Translates to: VWRCVVHTINSITPATEVIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 2 (lower is better)
Translates to: NLFESFINVWRCVVHTINMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTCCAACTGGTGGACACTaGTGCATCCGGAGTCACTTA +
Preference number: 2 (lower is better)
Translates to: QITKNVLQNKDLRATYGVPTGGH*CIRSHL
Trigger: TAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGG...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAAGCCATCCTTGTCATTaGTTCCAACTGGTGGACACT +
Preference number: 2 (lower is better)
Translates to: VWRCVVHTINSITPATEVSHPCH*FQLVDT
Trigger: AGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: QITKNVLQNKDLRATYGVGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 2 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAA +
Preference number: 2 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKTYGVA*SEPPQK
Trigger: TTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGTCATTGCTTCCAACTaGTGGACACTGATGCATCCG +
Preference number: 2 (lower is better)
Translates to: FYFQCREITDGPSGYFQSVIASN*WTLMHP
Trigger: CGGATGCATCAGTGTCCACCAGTTGGAAGCAATGAC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGAAGAACCGAATGGGGTaGGTGGAAGAGGTTTTATTT +
Preference number: 2 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKKNRMG*VEEVLF
Trigger: AAATAAAACCTCTTCCACCCACCCCATTCGGTTCTT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 2 (lower is better)
Translates to: NLFESFINVWRCVVHTINKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTACAAAAACCCAGTTCTaGCACACGCAAGACAGACGA +
Preference number: 2 (lower is better)
Translates to: QITKNVLQNKDLRATYGVTKTQF*HTQDRR
Trigger: TCGTCTGTCTTGCGTGTGTCAGAACTGGGTTTTTGT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATTCAGAACAAGGATCTaGGAGCAACTTATGGTGTTG +
Preference number: 2 (lower is better)
Translates to: VWRCVVHTINSITPATEVFRTRI*EQLMVL
Trigger: CAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAA...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 2 (lower is better)
Translates to: FYFQCREITDGPSGYFQSAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAACAAAAACCCAGTTCTaGCACACGCAAGACAGACGA +
Preference number: 2 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQTKTQF*HTQDRR
Trigger: TCGTCTGTCTTGCGTGTGTCAGAACTGGGTTTTTGT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 2 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGTCATTGCTTCCAACTaGTGGACACTGATGCATCCG +
Preference number: 2 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLVIASN*WTLMHP
Trigger: CGGATGCATCAGTGTCCACCAGTTGGAAGCAATGAC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAAACAGATGGTCCGAGTaGATACTTTCAGTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQNRWSE*ILSVQA
Trigger: AGCCTGGACTGAAAGTATCCACTCGGACCATCTGTT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 2 (lower is better)
Translates to: NLFESFINVWRCVVHTINIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp CGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCAGAAGAACCGAATGGG +
Preference number: 3 (lower is better)
Translates to: RLVPWHCCKRPT*AFEGQAEEPNG
Trigger: CCCATTCGGTTCTTCTGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR GCA 72 bp AACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTaGCGTGGCACTGCTGTAAAAGGCCAACATGGGCAT +
Preference number: 3 (lower is better)
Translates to: NPLECEMWQLAW*RGTAVKGQHGH
Trigger: ATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGG +
Preference number: 3 (lower is better)
Translates to: SNPLECEMWQLA*CRGTAVKGQHG
Trigger: CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR TCA 72 bp AACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGATGTCATGGGTTCCTC +
Preference number: 3 (lower is better)
Translates to: NARRQLTMSSQL*SFHALGCHGFL
Trigger: GAGGAACCCATGACATCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp CACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTaGACACTGATGCATCCGGAGTCACTTATGACACAG +
Preference number: 3 (lower is better)
Translates to: HQPAILVIASNW*TLMHPESLMTQ
Trigger: CTGTGTCATAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGATGTGGCAGCTCGCTaGGTGCCGTGGCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: VWRCVVHTINSITPATEVDVAAR*VPWHCC
Trigger: ACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTACCAGCCAGCCATCCTaGTCATTGCTTCCAACTGGT +
Preference number: 3 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFITSQPS*SLLPTG
Trigger: ACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp AAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTaGTGGACACTGATGCATCCGGAGTCACTTATGACA +
Preference number: 3 (lower is better)
Translates to: KHQPAILVIASN*WTLMHPESLMT
Trigger: TGTCATAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGAGCAACTTATGGTGTaGCCTGCTCTGAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKEQLMV*PALNLH
Trigger: GTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 3 (lower is better)
Translates to: VWRCVVHTINSITPATEVQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGATGTGGCAGCTCGCTaGGTGCCGTGGCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLDVAAR*VPWHCC
Trigger: ACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR GCA 72 bp CAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAACCCAGTTCTGACACA +
Preference number: 3 (lower is better)
Translates to: QNKDLRATYGVA*SEPPQKPSSDT
Trigger: TGTGTCAGAACTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTCTCAGATCCTTGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp AGAACTAATAGTTCAAACCCTTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: RTNSSNPLECEM*QLAWCRGTAVK
Trigger: TTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGAACTATTAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 3 (lower is better)
Translates to: KRFYFQCREITDGPSGYFQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR-3UTR CAA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 3 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
3UTR CCA 72 bp ACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTaGTACATACAATTAACAGCATCACACCAGCTACAG +
Preference number: 3 (lower is better)
Translates to: TSLSPLLTSGDV*YIQLTASHQLQ
Trigger: CTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCTCTATCTCGCCGGCCTaGGGGTGCCGCGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGSISPA*GCRGGP
Trigger: GGGCCCTCCGCGGCACCCCCAGGCCGGCGAGATAGA...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGGCAACGGCTGGTTGTaGCGGGGGACTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIGNGWL*RGTGCC
Trigger: GCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATTTCCACCTGGGTGCTaGGCCCAGTGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGFPPGC*AQWPPR
Trigger: GCGCGGCGGCCACTGGGCGCAGCACCCAGGTGGAAA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGGCAACGGCTGGTTGTaGCGGGGGACTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAGNGWL*RGTGCC
Trigger: GCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGCTGGCGTCAGGTGTaGTGGCGGGGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFCWRQV*WRGCHC
Trigger: GCAGTGACAGCCCCGCCAGCACACCTGACGCCAGCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTCCCTGGGGTCCCAATaGGGGCCGGCTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFSLGSQ*GPAGYP
Trigger: AGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSAWPWR*ALGGSV
Trigger: AACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTCATTTCCACCTGGGTaGTGCGCCCAGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLSFPPG*CAQWPP
Trigger: CGGCGGCCACTGGGCGCAGCACCCAGGTGGAAATGA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCTCATTTCCACCTGGGTaGTGCGCCCAGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGSFPPG*CAQWPP
Trigger: CGGCGGCCACTGGGCGCAGCACCCAGGTGGAAATGA...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTGCTGGCGTCAGGTGTaGTGGCGGGGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTACWRQV*WRGCHC
Trigger: GCAGTGACAGCCCCGCCAGCACACCTGACGCCAGCA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGCCGGCTGGATACCCTaGGTACTGATGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIAGWIP*VLMGAG
Trigger: GCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGCAGGCTGTATCCCTaGGGTCCCAATGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGCRLYP*GPNGGR
Trigger: CCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCGTGGCGATGAGCCCTaGGCGGGAGCGTTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLRGDEP*AGALVL
Trigger: TAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCCACTGTTTGCAATCTaGGAAGGGGCCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGPLFAI*EGAWLS
Trigger: GCTGAGCCAGGCCCCTTCTCAGATTGCAAACAGTGG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCGCGCTCTCCGTCTGTaGGGCCGACGTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMRALRL*GRRPQA
Trigger: AGCCTGGGGACGTCGGCCCCACAGACGGAGAGCGCG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCTTCTCCTCCCGGGACTaGAGGGAGCTGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIFSSRD*RELLEL
Trigger: GAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAA...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCAGGAGGGATGGCATTaGAGGTGGTCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFQEGWH*RWSQVA
Trigger: GGCCACCTGTGACCACCTCCAATGCCATCCCTCCTG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGLGRVV*LDPRRS
Trigger: ACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLPWPQD*ERPDVR
Trigger: CCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGCCGGCTGGATACCCTaGGTACTGATGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGAGWIP*VLMGAG
Trigger: GCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGTCGGTGGGGGCTGCTaGGCAGTTGGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSVGGGC*AVGGTA
Trigger: TGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGAC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGGACCGCTCCAGGAATaGTTGAAAGGGCAACGGCTG +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGGPLQE*LKGQRL
Trigger: CAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTGTGCTCCCTGGCACTaGCTTCAGAATCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGCAPWH*LQNLDQ
Trigger: CTGGTCGAGATTCTGAAGTCAGTGCCAGGGAGCACA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTAGCATTTGGCAGCTGTaGGGTCGGCCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFSIWQL*GRPQDC
Trigger: ACAGTCCTGAGGCCGACCTCACAGCTGCCAAATGCT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGGGAGCTTGCGTGTGTaGCACAGATCCAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIGSLRV*HRSSCG
Trigger: ACCACAGCTGGATCTGTGTCACACACGCAAGCTCCC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGAGGAGAAGTGTGCGTaGTCTGCTGGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGEEKCA*SAGAPP
Trigger: AGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCACCTGCAGGCCTAGGTaGCCCAGACGTACTCCGCAT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGTCRPR*PRRTPH
Trigger: ATGCGGAGTACGTCTGGGTCACCTAGGCCTGCAGGT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCACTCCAGCGCCGCTaGTTCCGCCGCCGTAACGAG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTSLQRR*FRRRNE
Trigger: CTCGTTACGGCGGCGGAAGCAGCGGCGCTGGAGTGA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259234.10
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTTTCCACCTGGGTGCTaGGCCCAGTGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIFPPGC*AQWPPR
Trigger: GCGCGGCGGCCACTGGGCGCAGCACCCAGGTGGAAA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGGGACTGGAGGGAGCTaGTGGAACTCATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAGTGGS*WNSCAP
Trigger: GGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTATCCGAGGAGAAGTGTaGGTGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFIRGEV*VICWGT
Trigger: GGTGCCCCAGCAGATCACGCACACTTCTCCTCGGAT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCATCCGAGGAGAAGTGTaGGTGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIIRGEV*VICWGT
Trigger: GGTGCCCCAGCAGATCACGCACACTTCTCCTCGGAT...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGHHGCC*WSSTEW
Trigger: CCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGVSSGV*LAVAMS
Trigger: GCTCATCGCCACGGCCAAGCATACTCCGGAAGAAAC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGCTGGGGCACCACCTTaGCGACTGGGATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGAGAPP*RLGCLR
Trigger: CCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTGCAGGCTGTATCCCTaGGGTCCCAATGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNCRLYP*GPNGGR
Trigger: CCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCA...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACCACTGTTTGCAATCTaGGAAGGGGCCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGPLFAI*EGAWLS
Trigger: GCTGAGCCAGGCCCCTTCTCAGATTGCAAACAGTGG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGCAACAGGTGTGGCTaGTGCGACAGCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFCNRCG*CDSMVC
Trigger: ACACACCATGCTGTCGCATCAGCCACACCTGTTGCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCTGAGCTCTGGTGGCTaGGACAGTTGCTACCACAGC +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLLSSGG*DSCYHS
Trigger: GCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCACCAGTCTGAGCTGTaGTGGCAGAGTTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIHQSEL*WQSLEP
Trigger: AGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCACCAGTCTGAGCTGTaGTGGCAGAGTTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFHQSEL*WQSLEP
Trigger: AGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGVDWGC*VNSLCA
Trigger: GGCACACAGGGAATTCACTCAGCAACCCCAATCAAC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGCTGGCGTCAGGTGTaGTGGCGGGGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMCWRQV*WRGCHC
Trigger: GCAGTGACAGCCCCGCCAGCACACCTGACGCCAGCA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGCTGAATCAGTAGCATaGGCCGCTGTCGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGAESVA*AAVVVM
Trigger: CATCACTACGACAGCGGCGCATGCTACTGATTCAGC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACTGTGTGCCAAGTGGTaGAGGCTGTATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGLCAKW*RLYPWG
Trigger: ACCCCAGGGATACAGCCTGCACCACTTGGCACACAG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCTCTGGCTGTGGGTCTaGACCACGGTTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTALWLWV*TTVVAA
Trigger: AGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIVSSGV*LAVAMS
Trigger: GCTCATCGCCACGGCCAAGCATACTCCGGAAGAAAC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGGCAGCTCGCTTGGTaGCGTGGCACTGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFWQLAW*RGTAVK
Trigger: TTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGCTGATGCGACAGCATaGTGTGTCGACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGADATA*CVDNIC
Trigger: GCAGATGTTGTCGACACACCATGCTGTCGCATCAGC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTGGCGTCAGGTGTGCTaGCGGGGCTGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSWRQVC*RGCHCN
Trigger: GTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCA...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGGAGGTGGTCACAGGTaGCCGAGACTGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAGGGHR*PRLDWL
Trigger: CAACCAATCCAGTCTCGGCCACCTGTGACCACCTCC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTGTCGTAGTGATGACTaGAGACTGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGCRSDD*RLSSGG
Trigger: GCCACCAGAGCTCAGTCTCCAGTCATCACTACGACA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGCATGGGGTTTAGGTaGACGGTAGACGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFCMGFR*TVDATP
Trigger: TGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATCCCTGGGGTCCCAATaGGGGCCGGCTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKESLGSQ*GPAGYP
Trigger: AGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATGCAGGCTGTATCCCTaGGGTCCCAATGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKECRLYP*GPNGGR
Trigger: CCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTTGGTGCTAGCACTCTaGCTGTGGGTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTALVLAL*LWVCTT
Trigger: CGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCGTGGCGATGAGCCCTaGGCGGGAGCGTTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMRGDEP*AGALVL
Trigger: TAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGGGCTGCTGGGCAGTTaGAGGGACGGCAATGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSGLLGS*RDGNGR
Trigger: CCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGGACCGCTCCAGGAATaGTTGAAAGGGCAACGGCTG +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGGPLQE*LKGQRL
Trigger: CAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTGTGCTCCCTGGCACTaGCTTCAGAATCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTACAPWH*LQNLDQ
Trigger: CTGGTCGAGATTCTGAAGTCAGTGCCAGGGAGCACA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTGGAATGGCTGAAGCTTaGGGGATGCTACTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFGMAEA*GMLLSM
Trigger: CATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCC...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGGCCTACTAAGTGCTaGATCAGTAGCATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLWPTKC*ISSMRR
Trigger: GCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACACCAGTCTGAGCTGTaGTGGCAGAGTTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGHQSEL*WQSLEP
Trigger: AGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTACCCCAACACCAGTCTaGGCTGTGATGGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFTPTPV*AVMAEF
Trigger: AAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCTGGGGTGTAGGTATGTaGCGCCAGTGGGTATGCAGA +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGWGVGM*RQWVCR
Trigger: TCTGCATACCCACTGGCGGCACATACCTACACCCCA...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFLGTDG*WLDPLN
Trigger: ATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLHHGCC*WSSTEW
Trigger: CCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGVSSGV*LAVAMS
Trigger: GCTCATCGCCACGGCCAAGCATACTCCGGAAGAAAC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGAGCCAGTGGAGGAACTaGAGAAACTGGCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGSQWRN*RNWPHD
Trigger: ATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGAACTCATTTCCACCTaGGTGCTGCGCCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTELIST*VLRPVA
Trigger: GGCCACTGGGCGCAGCACCCAGGTGGAAATGAGTTC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGAACTCATTTCCACCTaGGTGCTGCGCCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSELIST*VLRPVA
Trigger: GGCCACTGGGCGCAGCACCCAGGTGGAAATGAGTTC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTTCTCCTCCCGGGACTaGAGGGAGCTGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTFSSRD*RELLEL
Trigger: GAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCAACATCTGCACCTGTaGATAGGGCCTTACCACAAC +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGQHLHL*IGPYHN
Trigger: GTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTGCTGATGCGACAGCATaGTGTGTCGACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFADATA*CVDNIC
Trigger: GCAGATGTTGTCGACACACCATGCTGTCGCATCAGC...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCTGTCGTAGTGATGACTaGAGACTGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALICRSDD*RLSSGG
Trigger: GCCACCAGAGCTCAGTCTCCAGTCATCACTACGACA...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCCCGATGTCCGGAGATaGGAATCAGGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLPDVRR*ESGYSS
Trigger: AGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACCCGATGTCCGGAGATaGGAATCAGGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGPDVRR*ESGYSS
Trigger: AGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMPWPQD*ERPDVR
Trigger: CCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCACGGAACTGGTGATTaGGGTGTAGGTATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAHGTGD*GVGMCR
Trigger: GCGGCACATACCTACACCCCAATCACCAGTTCCGTG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCACGGAACTGGTGATTaGGGTGTAGGTATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLHGTGD*GVGMCR
Trigger: GCGGCACATACCTACACCCCAATCACCAGTTCCGTG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTGCATGGGGTTTAGGTaGACGGTAGACGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTACMGFR*TVDATP
Trigger: TGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGCCGGCTGGATACCCTaGGTACTGATGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKAGWIP*VLMGAG
Trigger: GCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCCAATGGGGGCCGGCTaGATACCCTGGGTACTGATG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTPMGAG*IPWVLM
Trigger: CATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCCAATGGGGGCCGGCTaGATACCCTGGGTACTGATG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNPMGAG*IPWVLM
Trigger: CATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTCCCTGGGGTCCCAATaGGGGCCGGCTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFISLGSQ*GPAGYP
Trigger: AGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCGTGGCGATGAGCCCTaGGCGGGAGCGTTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIRGDEP*AGALVL
Trigger: TAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCTGCCATTCCATCTGTaGCAGGTTTCTTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGLPFHL*QVSSGV
Trigger: TACTCCGGAAGAAACCTGCCACAGATGGAATGGCAG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGGGCTGCTGGGCAGTTaGAGGGACGGCAATGGTAGG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMGLLGS*RDGNGR
Trigger: CCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGCTGCAATCATAGTTaGAATGGTCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFCCNHS*NGRWGL
Trigger: CAGCCCCCACCGACCATTCCAACTATGATTGCAGCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTCTATCTCGCCGGCCTaGGGGTGCCGCGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMSISPA*GCRGGP
Trigger: GGGCCCTCCGCGGCACCCCCAGGCCGGCGAGATAGA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCAAGTCCCTCCGAAAATaGAAGTGGCACTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGKSLRK*KWHCWR
Trigger: ACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAAAGTCCCTCCGAAAATaGAAGTGGCACTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGKSLRK*KWHCWR
Trigger: ACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTT...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGGAATGGCTGAAGCTTaGGGGATGCTACTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLGMAEA*GMLLSM
Trigger: CATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGCCACAGGAATGGCTaGAGCTTGAGGGATGCTACT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGCHRNG*SLRDAT
Trigger: AGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCAGGACGCTGAATACTaGTTGCTGCAGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIQDAEY*LLQMED
Trigger: ATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGCGACTGGGATGTTTaGGGTGGTCACAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTGDWDV*GGHSSS
Trigger: GCTACTGCTGTGACCACCTCAAACATCCCAGTCGCC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGGACACGGAACTGGTaGTTGGGGTGTAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLWTRNW*LGCRYV
Trigger: CACATACCTACACCCCAATCACCAGTTCCGTGTCCA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGGACACGGAACTGGTaGTTGGGGTGTAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGWTRNW*LGCRYV
Trigger: CACATACCTACACCCCAATCACCAGTTCCGTGTCCA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCACCCCAACACCAGTCTaGGCTGTGATGGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLTPTPV*AVMAEF
Trigger: AAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGT...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCCCATAGGTGCAGGCTaGAGCCCTTGTGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGPIGAG*SPCVLI
Trigger: AATCAACACACAAGGGCTTCAGCCTGCACCTATGGG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMAWPWR*ALGGSV
Trigger: AACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVAWPWR*ALGGSV
Trigger: AACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAACCTGCAGGCCTAGGTaGCCCAGACGTACTCCGCAT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKETCRPR*PRRTPH
Trigger: ATGCGGAGTACGTCTGGGTCACCTAGGCCTGCAGGT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGACCTGCAGGCCTAGGTaGCCCAGACGTACTCCGCAT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMTCRPR*PRRTPH
Trigger: ATGCGGAGTACGTCTGGGTCACCTAGGCCTGCAGGT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCGCTCCAGGAATGGTTaGAAGGGCAACGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTRSRNG*KGNGWL
Trigger: CAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCGCTCCAGGAATGGTTaGAAGGGCAACGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSRSRNG*KGNGWL
Trigger: CAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGGACTTTCCAGCCTTaGGCACGACAGGATACTCCT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGWTFQP*ARQDTP
Trigger: AGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCTGCTGGAACTCATGTaGTCCCTGGCACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGLLELM*SLALTS
Trigger: TGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGCTGAATCAGTAGCATaGGCCGCTGTCGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGAESVA*AAVVVM
Trigger: CATCACTACGACAGCGGCGCATGCTACTGATTCAGC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGGTTGCCAAAATAGGTaGTACTGTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLGCQNR*YCGCSH
Trigger: GTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGGTTGCCAAAATAGGTaGTACTGTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGGCQNR*YCGCSH
Trigger: GTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGGTTGCCAAAATAGGTaGTACTGTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAGCQNR*YCGCSH
Trigger: GTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGAAGTGTGCGTGATCTaGTGGGGCACCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKEVCVI*WGTTLA
Trigger: CGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACATCCGAGGAGAAGTGTaGGTGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNIRGEV*VICWGT
Trigger: GGTGCCCCAGCAGATCACGCACACTTCTCCTCGGAT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGLGTDG*WLDPLN
Trigger: ATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACTGAGTACCCATAGGTaGAGGCTGAAGCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGLSTHR*RLKPLC
Trigger: ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGAGGGTTTTCCGAACTaGCATTCCATCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAEGFPN*HSICGR
Trigger: CCTGCCACAGATGGAATGGCAGTTCGGAAAACCCTC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCACTGGAGGGAGCTGCTaGAACTCATGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSTGGSC*NSCAPW
Trigger: CCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGAGGGAGCTGCTaGAACTCATGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTGGSC*NSCAPW
Trigger: CCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGATGTGCTGTACTGCTaGCTGAGCAGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIDVLYC*LSSSSI
Trigger: AATGCTGCTACTGCTCAGCCAGCAGTACAGCACATC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACGGAGGTGGTCACAGGTaGCCGAGACTGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNGGGHR*PRLDWL
Trigger: CAACCAATCCAGTCTCGGCCACCTGTGACCACCTCC...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTGTCGTAGTGATGACTaGAGACTGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTACRSDD*RLSSGG
Trigger: GCCACCAGAGCTCAGTCTCCAGTCATCACTACGACA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLVTAVA*EEWEGT
Trigger: AGTACCCTCCCATTCCTCCCATGCTACTGCTGTGAC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAVTAVA*EEWEGT
Trigger: AGTACCCTCCCATTCCTCCCATGCTACTGCTGTGAC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGCTGGGGCACCACCTTaGCGACTGGGATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKAGAPP*RLGCLR
Trigger: CCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTLGRVV*LDPRRS
Trigger: ACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGCCGGCTGGATACCCTaGGTACTGATGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIAGWIP*VLMGAG
Trigger: GCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCCAATGGGGGCCGGCTaGATACCCTGGGTACTGATG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKPMGAG*IPWVLM
Trigger: CATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCTGTGTGCCAAGTaGTGCAGGCTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTSLCAK*CRLYPW
Trigger: CCAGGGATACAGCCTGCACCACTTGGCACACAGGGA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGGTTGGCCACAATTGTaGCTCCATCTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGGWPQL*LHLPTP
Trigger: TGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCTGCCATTCCATCTGTaGCAGGTTTCTTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALILPFHL*QVSSGV
Trigger: TACTCCGGAAGAAACCTGCCACAGATGGAATGGCAG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCTGCCATTCCATCTGTaGCAGGTTTCTTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFLPFHL*QVSSGV
Trigger: TACTCCGGAAGAAACCTGCCACAGATGGAATGGCAG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGTCGGTGGGGGCTGCTaGGCAGTTGGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFVGGGC*AVGGTA
Trigger: TGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGAC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGTCAGCTGTAGTAACTaGGCAGCACAGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLVSCSN*AAQRWT
Trigger: AGTCCACCTCTGTGCTGCCCAGTTACTACAGCTGAC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLLECEM*QLAWCR
Trigger: ACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGCTGTACTGCTGGCTaGGCAGTAGCAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTCCTAG*AVAAFG
Trigger: GCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGGATTGGTTGGTGAATaGTGTGCTGTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLGLVGE*CAVLLA
Trigger: AGCCAGCAGTACAGCACATCATTCACCAACCAATCC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCGACTGGATTGGTTGGTaGATGATGTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIDWIGW*MMCCTA
Trigger: AGCAGTACAGCACATCATTCACCAACCAATCCAGTC...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGGCCTACTAAGTGCTaGATCAGTAGCATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTWPTKC*ISSMRR
Trigger: GCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAGGACGCTGAATACTaGTTGCTGCAGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGQDAEY*LLQMED
Trigger: ATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGGGAGCTTGCGTGTGTaGCACAGATCCAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKGSLRV*HRSSCG
Trigger: ACCACAGCTGGATCTGTGTCACACACGCAAGCTCCC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTTTGGAGCCTGAGCTaGAACTGGATACTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAVWSLS*NWILSD
Trigger: ATCCGACAGTATCCAGTTTCAGCTCAGGCTCCAAAC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCATTGGGGTTGCTGAGTaGATTCCCTGTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGIGVAE*IPCVPS
Trigger: ACTTGGCACACAGGGAATTCACTCAGCAACCCCAAT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGGCAACGGCTGGTTGTaGCGGGGGACTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYGNGWL*RGTGCC
Trigger: GCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTAGCAGAACCACTGTTTaGAATCTGAGAAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTASRTTV*NLRRGL
Trigger: CAGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGGGACTGGAGGGAGCTaGTGGAACTCATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASGTGGS*WNSCAP
Trigger: GGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAACCACAACAGGCTCTTaGTTCTCCTCCCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKETTTGS*FSSRDW
Trigger: CCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAAATGATGTGCTGTACTaGTGGCTGAGCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGNDVLY*WLSSSS
Trigger: GCTGCTACTGCTCAGCCAGCAGTACAGCACATCATT...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAGGTGCTACTGTGGCTaGAGCCACTGGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASRCYCG*SHWRAS
Trigger: ACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTCCACTGTCATCAACTaGATGGGGTTTAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLSTVIN*MGFRWT
Trigger: CGTCCACCTAAACCCCATGCAGTTGATGACAGTGGA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTCCACTGTCATCAACTaGATGGGGTTTAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTASTVIN*MGFRWT
Trigger: CGTCCACCTAAACCCCATGCAGTTGATGACAGTGGA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAAGTGAATTCCCTGTGTaGCAAGTGGTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGSEFPV*QVVQAV
Trigger: TACAGCCTGCACCACTTGGCACACAGGGAATTCACT...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNHHGCC*WSSTEW
Trigger: CCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSHHGCC*WSSTEW
Trigger: CCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAACTGGAGGGAGCTGCTaGAACTCATGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKETGGSC*NSCAPW
Trigger: CCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGATGTGCTGTACTGCTaGCTGAGCAGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLDVLYC*LSSSSI
Trigger: AATGCTGCTACTGCTCAGCCAGCAGTACAGCACATC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGATGTGCTGTACTGCTaGCTGAGCAGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGDVLYC*LSSSSI
Trigger: AATGCTGCTACTGCTCAGCCAGCAGTACAGCACATC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCTGGCCGAGACTGGATTaGTTGGTGAATGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGWPRLD*LVNDVL
Trigger: CAGCACATCATTCACCAACCAATCCAGTCTCGGCCA...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGGCCGAGACTGGATTaGTTGGTGAATGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGWPRLD*LVNDVL
Trigger: CAGCACATCATTCACCAACCAATCCAGTCTCGGCCA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCAGGAGGGATGGCATTaGAGGTGGTCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIQEGWH*RWSQVA
Trigger: GGCCACCTGTGACCACCTCCAATGCCATCCCTCCTG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLVAWEE*EGTVMV
Trigger: TACCATGACAGTACCCTCCCATTCCTCCCATGCTAC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCACTTCGGGTTTCCATaGCCACAGGATTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNHFGFP*PQDWER
Trigger: CCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGGTACTGATGGGTGCTaGCTGGATCCCTTGAATATG +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGGTDGC*LDPLNM
Trigger: CATATTCAAGGGATCCAGCCAGCACCCATCAGTACC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTGCAGGCTGTATCCCTaGGGTCCCAATGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFCRLYP*GPNGGR
Trigger: CCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCACGGTTGTTGCTGCTaGAGCAGCACTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAHGCCC*SSTEWI
Trigger: AATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTT +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNLALWL*VCTTVV
Trigger: AACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCGTGGATTTCAGACTTaGGTTTGGCACCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSRGFQT*VWHLQA
Trigger: GGCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCGTGGATTTCAGACTTaGGTTTGGCACCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTRGFQT*VWHLQA
Trigger: GGCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCGTGGATTTCAGACTTaGGTTTGGCACCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNRGFQT*VWHLQA
Trigger: GGCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGTCGGTGGGGGCTGCTaGGCAGTTGGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYVGGGC*AVGGTA
Trigger: TGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGAC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTCACCAGAAGACTCTTaGCAGTGGACTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGSPEDS*QWTSHH
Trigger: ATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATCAATATACTCCTTaGGAGGAGACTTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGHQYTP*EETCAS
Trigger: AGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGATGTGGCAGCTCGCTTaGTGCCGTGGCACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMMWQLA*CRGTAV
Trigger: TACAGCAGTGCCACGGCACCAAGCGAGCTGCCACAT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGCAACAGGTGTGGCTaGTGCGACAGCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMCNRCG*CDSMVC
Trigger: ACACACCATGCTGTCGCATCAGCCACACCTGTTGCA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACAAGTCCCTCCGAAAATaGAAGTGGCACTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNKSLRK*KWHCWR
Trigger: ACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAGCATTTGGCAGCTGTaGGGTCGGCCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASSIWQL*GRPQDC
Trigger: ACAGTCCTGAGGCCGACCTCACAGCTGCCAAATGCT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGACTGGATTGGTTGGTaGATGATGTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTADWIGW*MMCCTA
Trigger: AGCAGTACAGCACATCATTCACCAACCAATCCAGTC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCCTGAGCTCTGGTGGCTaGGACAGTTGCTACCACAGC +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASLSSGG*DSCYHS
Trigger: GCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAG...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGACTGGGCAGGACGCTaGATACTGATTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTDWAGR*ILIAAD
Trigger: ATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGGGAGCTTGCGTGTGTaGCACAGATCCAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASGSLRV*HRSSCG
Trigger: ACCACAGCTGGATCTGTGTCACACACGCAAGCTCCC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTGGACACGGAACTGGTaGTTGGGGTGTAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNWTRNW*LGCRYV
Trigger: CACATACCTACACCCCAATCACCAGTTCCGTGTCCA...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSAGWIP*ICRACD
Trigger: ATCGCATGCTCGACATATTCAAGGGATCCAGCCAGC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSVDWGC*VNSLCA
Trigger: GGCACACAGGGAATTCACTCAGCAACCCCAATCAAC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCCCATAGGTGCAGGCTaGAGCCCTTGTGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNPIGAG*SPCVLI
Trigger: AATCAACACACAAGGGCTTCAGCCTGCACCTATGGG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCCCATAGGTGCAGGCTaGAGCCCTTGTGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSPIGAG*SPCVLI
Trigger: AATCAACACACAAGGGCTTCAGCCTGCACCTATGGG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCTTTCTTCTCCTCTTTaGCCCGGACGTCACTGTACC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTLSSPL*PGRHCT
Trigger: GGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGGACTTTCCAGCCTTaGGCACGACAGGATACTCCT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTWTFQP*ARQDTP
Trigger: AGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGGTGTTGCCTGCTCTaGACCTCCACAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTWCCLL*TSTKTQ
Trigger: CTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCTGCTGGAACTCATGTaGTCCCTGGCACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNLLELM*SLALTS
Trigger: TGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGCTGCAGATGGAGGATaGTGGATAGACAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSAADGG*WIDKVG
Trigger: GCCAACCTTGTCTATCCAGCATCCTCCATCTGCAGC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACGCTGCAGATGGAGGATaGTGGATAGACAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNAADGG*WIDKVG
Trigger: GCCAACCTTGTCTATCCAGCATCCTCCATCTGCAGC...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTATGTCGAGCATGCGATaGATCCACTGTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAMSSMR*IHCHQL
Trigger: CAGTTGATGACAGTGGATGCATCGCATGCTCGACAT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTLGTDG*WLDPLN
Trigger: ATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCTGTGTGCCAAGTGGTaGAGGCTGTATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFILCAKW*RLYPWG
Trigger: ACCCCAGGGATACAGCCTGCACCACTTGGCACACAG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKLHHGC*CWSSTE
Trigger: TTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCCTCTGGCTGTGGGTCTaGACCACGGTTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASLWLWV*TTVVAA
Trigger: AGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAG...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGAGGGTTTTCCGAACTaGCATTCCATCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSEGFPN*HSICGR
Trigger: CCTGCCACAGATGGAATGGCAGTTCGGAAAACCCTC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCATGGACAAGTTGTTTaGCAGCAATGCAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFHGQVV*QQCKRW
Trigger: CCATCTCTTGCATTGCTGGCAAACAACTTGTCCATG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTCTGTTGAGATCACATaGTGTTGCTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGSVEIT*CCFRGF
Trigger: AAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGATGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGCHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGGCAGCTCGCTTGGTaGCGTGGCACTGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMWQLAW*RGTAVK
Trigger: TTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTCGCGCTCTCCGTCTGTaGGGCCGACGTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVRALRL*GRRPQA
Trigger: AGCCTGGGGACGTCGGCCCCACAGACGGAGAGCGCG...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCTGGAGACTGAGCTCTaGTGGCTGAGACAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTLETEL*WLRQLL
Trigger: TAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTACTGATTGCTGCAGATaGAGGATGCTGGATAGACAA +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFTDCCR*RMLDRQ
Trigger: TTGTCTATCCAGCATCCTCCATCTGCAGCAATCAGT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMCGCSH*RASTED
Trigger: ATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSVTAVA*EEWEGT
Trigger: AGTACCCTCCCATTCCTCCCATGCTACTGCTGTGAC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCCCGATGTCCGGAGATaGGAATCAGGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKPDVRR*ESGYSS
Trigger: AGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCCCGATGTCCGGAGATaGGAATCAGGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMPDVRR*ESGYSS
Trigger: AGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCACTTCGGGTTTCCATaGCCACAGGATTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKHFGFP*PQDWER
Trigger: CCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCACGGAACTGGTGATTaGGGTGTAGGTATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKHGTGD*GVGMCR
Trigger: GCGGCACATACCTACACCCCAATCACCAGTTCCGTG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTCCCTGGGGTCCCAATaGGGGCCGGCTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMSLGSQ*GPAGYP
Trigger: AGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTCCCTGTGTGCCAAGTaGTGCAGGCTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASSLCAK*CRLYPW
Trigger: CCAGGGATACAGCCTGCACCACTTGGCACACAGGGA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKELALWL*VCTTVV
Trigger: AACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAG...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCGTGGCGATGAGCCCTaGGCGGGAGCGTTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMRGDEP*AGALVL
Trigger: TAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAVAIDT*ISDLGL
Trigger: CAAACCCAAGTCTGAAATCCACGTGTCTATGGCCAC...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAGCAATGCAAGAGATaGAGACACAGTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGQQCKR*RHSVGS
Trigger: GCTACCAACACTGTGTCTCCATCTCTTGCATTGCTG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNLECEM*QLAWCR
Trigger: ACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTGTGCTCCCTGGCACTaGCTTCAGAATCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFICAPWH*LQNLDQ
Trigger: CTGGTCGAGATTCTGAAGTCAGTGCCAGGGAGCACA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCAGGACGCTGAATACTaGTTGCTGCAGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTQDAEY*LLQMED
Trigger: ATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTCCAGCTGTGGTCGCTaGAGGAATGGTGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFISSCGR*RNGVGC
Trigger: GCAACCAACACCATTCCTTCAGCGACCACAGCTGGA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGAGGAGAAGTGTGCGTaGTCTGCTGGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKEEKCA*SAGAPP
Trigger: AGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEAGWIP*ICRACD
Trigger: ATCGCATGCTCGACATATTCAAGGGATCCAGCCAGC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGYPGY*WVLAGS
Trigger: GGATCCAGCCAGCACCCATCAGTACCCAGGGTATCC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACATTGGGGTTGCTGAGTaGATTCCCTGTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNIGVAE*IPCVPS
Trigger: ACTTGGCACACAGGGAATTCACTCAGCAACCCCAAT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMVDWGC*VNSLCA
Trigger: GGCACACAGGGAATTCACTCAGCAACCCCAATCAAC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCCCATAGGTGCAGGCTaGAGCCCTTGTGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMPIGAG*SPCVLI
Trigger: AATCAACACACAAGGGCTTCAGCCTGCACCTATGGG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINAWPWR*ALGGSV
Trigger: AACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGAGGCTGAGGAGGAATaGGGGTTTTCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIEAEEE*GFSELP
Trigger: TGGCAGTTCGGAAAACCCTCATTCCTCCTCAGCCTC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGCAACATCAGGAGGCTaGGGAGGAATGAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEATSGG*GGMRVF
Trigger: GAAAACCCTCATTCCTCCTCAGCCTCCTGATGTTGC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCAGAAACTGGCCTCATaGTATCCATTGGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIQKLAS*YPLVLL
Trigger: AAGTAGAACCAATGGATATCATGAGGCCAGTTTCTG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCAGAAACTGGCCTCATaGTATCCATTGGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFQKLAS*YPLVLL
Trigger: AAGTAGAACCAATGGATATCATGAGGCCAGTTTCTG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCAGGATACTCCTTTCTaGTTAGCTATTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLQDTPF*LAISCS
Trigger: GCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATGGACTTTCCAGCCTTaGGCACGACAGGATACTCCT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEWTFQP*ARQDTP
Trigger: AGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCAGTCTCTGGCTTCACTaGTTTGATCCATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALISLWLH*FDPSQV
Trigger: AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACT...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATGGTGTTGCCTGCTCTaGACCTCCACAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEWCCLL*TSTKTQ
Trigger: CTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTGGTGTTGCCTGCTCTaGACCTCCACAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMWCCLL*TSTKTQ
Trigger: CTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCAGCAGAACCACTGTTTaGAATCTGAGAAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSSRTTV*NLRRGL
Trigger: CAGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGGACTGGAGGGAGCTaGTGGAACTCATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGTGGS*WNSCAP
Trigger: GGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGGGACTGGAGGGAGCTaGTGGAACTCATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFGTGGS*WNSCAP
Trigger: GGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGCTGCAGATGGAGGATaGTGGATAGACAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEAADGG*WIDKVG
Trigger: GCCAACCTTGTCTATCCAGCATCCTCCATCTGCAGC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCTGAATACTGATTGCTaGAGATGGAGGATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLLNTDC*RWRMLD
Trigger: ATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAGGTGCTACTGTGGCTaGAGCCACTGGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFRCYCG*SHWRAS
Trigger: ACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCT...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTAGTGAATTCCCTGTGTaGCAAGTGGTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTSEFPV*QVVQAV
Trigger: TACAGCCTGCACCACTTGGCACACAGGGAATTCACT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACAGTGAATTCCCTGTGTaGCAAGTGGTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNSEFPV*QVVQAV
Trigger: TACAGCCTGCACCACTTGGCACACAGGGAATTCACT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCGGGGGACTGGCTGCTaGAATCATAGTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKRGTGC*NHSWNG
Trigger: ACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTAGCCAGTGGAGGAACTaGAGAAACTGGCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTSQWRN*RNWPHD
Trigger: ATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCAGCCAGTGGAGGAACTaGAGAAACTGGCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSSQWRN*RNWPHD
Trigger: ATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCCATGGACAAGTTGTTTaGCAGCAATGCAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLHGQVV*QQCKRW
Trigger: CCATCTCTTGCATTGCTGGCAAACAACTTGTCCATG...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTGGCAGCTCGCTTGGTaGCGTGGCACTGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIWQLAW*RGTAVK
Trigger: TTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTGGCGTCAGGTGTGCTaGCGGGGCTGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMWRQVC*RGCHCN
Trigger: GTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATGGCGTCAGGTGTGCTaGCGGGGCTGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVWRQVC*RGCHCN
Trigger: GTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCA...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTVAWEE*EGTVMV
Trigger: TACCATGACAGTACCCTCCCATTCCTCCCATGCTAC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSVAWEE*EGTVMV
Trigger: TACCATGACAGTACCCTCCCATTCCTCCCATGCTAC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMVTAVA*EEWEGT
Trigger: AGTACCCTCCCATTCCTCCCATGCTACTGCTGTGAC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGTGTGCGTGATCTGCTaGGGCACCACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKVCVIC*GTTLAT
Trigger: AGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACAC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGGTTGGCCACAATTGTaGCTCCATCTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEGWPQL*LHLPTP
Trigger: TGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCCTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASLALWL*VCTTVV
Trigger: AACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAG...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAAGGAACTGCAGAAACTaGCCTCATGATATCCATTGG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGRNCRN*PHDIHW
Trigger: CCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCT...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGGGTCTTGGACGCACTaGGACATATCTCACACCTTC +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEGSWTH*DISHTF
Trigger: GAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCGTGGATTTCAGACTTaGGTTTGGCACCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNRGFQT*VWHHLW
Trigger: CCACAGATGGTGCCAAACCCAAGTCTGAAATCCACG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
3UTR CAA 72 bp TCACTATGTCCAGTCAGCTCTGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCTGCTTTCACACGGGAA +
Preference number: 4 (lower is better)
Translates to: SLCPVSSDPFTP*DVMGSSAFTRE
Trigger: TTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACATAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGGAATGGCTGAAGCTTaGGGGATGCTACTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASGMAEA*GMLLSM
Trigger: CATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGGAATGGCTGAAGCTTaGGGGATGCTACTCTCCATG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIGMAEA*GMLLSM
Trigger: CATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCAGGACGCTGAATACTaGTTGCTGCAGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMQDAEY*LLQMED
Trigger: ATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGTCCCTAATGCAGGGTaGGATGGTAGTGTGATTCTT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTVPNAG*DGSVIL
Trigger: AAGAATCACACTACCATCTCACCCTGCATTAGGGAC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGCGACTGGGATGTTTaGGGTGGTCACAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGDWDV*GGHSSS
Trigger: GCTACTGCTGTGACCACCTCAAACATCCCAGTCGCC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGTTTGGAGCCTGAGCTaGAACTGGATACTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKVWSLS*NWILSD
Trigger: ATCCGACAGTATCCAGTTTCAGCTCAGGCTCCAAAC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGTTTGGAGCCTGAGCTaGAACTGGATACTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMVWSLS*NWILSD
Trigger: ATCCGACAGTATCCAGTTTCAGCTCAGGCTCCAAAC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIAGWIP*ICRACD
Trigger: ATCGCATGCTCGACATATTCAAGGGATCCAGCCAGC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMGYPGY*WVLAGS
Trigger: GGATCCAGCCAGCACCCATCAGTACCCAGGGTATCC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGCAACATCAGGAGGCTaGGGAGGAATGAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASATSGG*GGMRVF
Trigger: GAAAACCCTCATTCCTCCTCAGCCTCCTGATGTTGC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGGCAACGGCTGGTTGTaGCGGGGGACTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFGNGWL*RGTGCC
Trigger: GCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCCTTTCTTCTCCTCTTTaGCCCGGACGTCACTGTACC +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASLSSPL*PGRHCT
Trigger: GGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAG...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACTGGCTTCACTGATTTaGTCCATCACAAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGLASLI*SITSLH
Trigger: GTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTAGTCTCTGGCTTCACTaGTTTGATCCATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTASLWLH*FDPSQV
Trigger: AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASMSSQL*SFHALG
Trigger: TCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACAT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCCAACTGGTGGACACTaGTGCATCCGGAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIPTGGH*CIRSHL
Trigger: TAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTTTCAGAACAAGGATCTaGGAGCAACTTATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAFRTRI*EQLMVL
Trigger: CAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAA...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGACCACAACAGGCTCTTaGTTCTCCTCCCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKTTTGS*FSSRDW
Trigger: CCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCTGCTGGCGTCAGGTGTaGTGGCGGGGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSCWRQV*WRGCHC
Trigger: GCAGTGACAGCCCCGCCAGCACACCTGACGCCAGCA...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGAATGATGTGCTGTACTaGTGGCTGAGCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMNDVLY*WLSSSS
Trigger: GCTGCTACTGCTCAGCCAGCAGTACAGCACATCATT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGCTGAATCAGTAGCATaGGCCGCTGTCGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIAESVA*AAVVVM
Trigger: CATCACTACGACAGCGGCGCATGCTACTGATTCAGC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGCTGCAGATGGAGGATaGTGGATAGACAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIAADGG*WIDKVG
Trigger: GCCAACCTTGTCTATCCAGCATCCTCCATCTGCAGC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACGCTGAATACTGATTaGTGCAGATGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTLNTD*CRWRML
Trigger: CAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAGGTGCTACTGTGGCTaGAGCCACTGGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYRCYCG*SHWRAS
Trigger: ACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTCCACTGTCATCAACTaGATGGGGTTTAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKSTVIN*MGFRWT
Trigger: CGTCCACCTAAACCCCATGCAGTTGATGACAGTGGA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCTGAGTACCCATAGGTaGAGGCTGAAGCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFILSTHR*RLKPLC
Trigger: ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCCTGAGTACCCATAGGTaGAGGCTGAAGCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASLSTHR*RLKPLC
Trigger: ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAG...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTCTGTTGAGATCACATaGTGTTGCTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLSVEIT*CCFRGF
Trigger: AAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGGGATAATCCCTTCCTaGAGGTTAGTAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGGIIPS*RLVSLS
Trigger: TGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGGGATAATCCCTTCCTaGAGGTTAGTAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGGIIPS*RLVSLS
Trigger: TGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNCHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTCHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLTYGVA*SEPPQK
Trigger: TTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGT...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGGAGGTGGTCACAGGTaGCCGAGACTGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFGGGHR*PRLDWL
Trigger: CAACCAATCCAGTCTCGGCCACCTGTGACCACCTCC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGCTGGGGCACCACCTTaGCGACTGGGATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYAGAPP*RLGCLR
Trigger: CCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCCTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFLGRVV*LDPRRS
Trigger: ACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAG...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGGTACTGATGGGTGCTaGCTGGATCCCTTGAATATG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKGTDGC*LDPLNM
Trigger: CATATTCAAGGGATCCAGCCAGCACCCATCAGTACC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTCCCTGTGTGCCAAGTaGTGCAGGCTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFSLCAK*CRLYPW
Trigger: CCAGGGATACAGCCTGCACCACTTGGCACACAGGGA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGGTTGGCCACAATTGTaGCTCCATCTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIGWPQL*LHLPTP
Trigger: TGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACGGTTGTTGCTGCTaGAGCAGCACTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEHGCCC*SSTEWI
Trigger: AATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTG...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTVAIDT*ISDLGL
Trigger: CAAACCCAAGTCTGAAATCCACGTGTCTATGGCCAC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGTCGGTGGGGGCTGCTaGGCAGTTGGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFVGGGC*AVGGTA
Trigger: TGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGAC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGACCGCTCCAGGAATaGTTGAAAGGGCAACGGCTG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGPLQE*LKGQRL
Trigger: CAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACCAGCAATGCAAGAGATaGAGACACAGTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNQQCKR*RHSVGS
Trigger: GCTACCAACACTGTGTCTCCATCTCTTGCATTGCTG...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCAGCAATGCAAGAGATaGAGACACAGTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSQQCKR*RHSVGS
Trigger: GCTACCAACACTGTGTCTCCATCTCTTGCATTGCTG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCAGCAATGCAAGAGATaGAGACACAGTGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTQQCKR*RHSVGS
Trigger: GCTACCAACACTGTGTCTCCATCTCTTGCATTGCTG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGGGTCTTGGACGCACTaGGACATATCTCACACCTTC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIGSWTH*DISHTF
Trigger: GAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGTCAGCTGTAGTAACTaGGCAGCACAGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIVSCSN*AAQRWT
Trigger: AGTCCACCTCTGTGCTGCCCAGTTACTACAGCTGAC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTAGTTCGTTTATTCGGTaGAGATCATCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFSSFIR*RSSSVA
Trigger: AGCAACAGATGATGATCTCCACCGAATAAACGAACT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGTCATTGCTTCCAACTaGTGGACACTGATGCATCCG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMVIASN*WTLMHP
Trigger: CGGATGCATCAGTGTCCACCAGTTGGAAGCAATGAC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMNRGNC*ELISTW
Trigger: CCAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTGCAACAGGTGTGGCTaGTGCGACAGCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFCNRCG*CDSMVC
Trigger: ACACACCATGCTGTCGCATCAGCCACACCTGTTGCA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTTTGTAGTCATGATGTaGTGCAGGTTACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTFVVMM*CRLLGW
Trigger: CCATCCCAGTAACCTGCATCACATCATGACTACAAA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGAGCATTTGGCAGCTGTaGGGTCGGCCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMSIWQL*GRPQDC
Trigger: ACAGTCCTGAGGCCGACCTCACAGCTGCCAAATGCT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGGATTGGTTGGTGAATaGTGTGCTGTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIGLVGE*CAVLLA
Trigger: AGCCAGCAGTACAGCACATCATTCACCAACCAATCC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCTGAGCTCTGGTGGCTaGGACAGTTGCTACCACAGC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMLSSGG*DSCYHS
Trigger: GCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTCCAGCTGTGGTCGCTaGAGGAATGGTGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKSSCGR*RNGVGC
Trigger: GCAACCAACACCATTCCTTCAGCGACCACAGCTGGA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGTTTGGAGCCTGAGCTaGAACTGGATACTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASVWSLS*NWILSD
Trigger: ATCCGACAGTATCCAGTTTCAGCTCAGGCTCCAAAC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGTCACCTTCTTCTGTTaGGATCACATGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTVTFFC*DHMLLL
Trigger: AAGCAACAGCATGTGATCTCAACAGAAGAAGGTGAC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCAGGATACTCCTTTCTaGTTAGCTATTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTQDTPF*LAISCS
Trigger: GCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACACCACAACAGGCTCTTaGTTCTCCTCCCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYTTTGS*FSSRDW
Trigger: CCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGATCCGAGGAGAAGTGTaGGTGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMIRGEV*VICWGT
Trigger: GGTGCCCCAGCAGATCACGCACACTTCTCCTCGGAT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAATGTCGAGCATGCGATaGATCCACTGTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEMSSMR*IHCHQL
Trigger: CAGTTGATGACAGTGGATGCATCGCATGCTCGACAT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTACTTCTCATCATCAGTaGTGTTTGTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTATSHHQ*CLSPSC
Trigger: ACATGATGGAGACAAACAGCACTGATGATGAGAAGT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTACAAGTTTACACCTCTaGATATTTCCCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFTSLHL*IFPCIS
Trigger: ACTGATACAGGGAAATATGCAGAGGTGTAAACTTGT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCAACATCTGCACCTGTaGATAGGGCCTTACCACAAC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIQHLHL*IGPYHN
Trigger: GTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGGCGTCAGGTGTGCTaGCGGGGCTGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVWRQVC*RGCHCN
Trigger: GTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTGCAGGTTACTGGGATaGCCCTGTTGTCCACTGATT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASCRLLG*PCCPLI
Trigger: AATCAGTGGACAACAGGGCCATCCCAGTAACCTGCA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGATTGCTGCAGATaGAGGATGCTGGATAGACAA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTDCCR*RMLDRQ
Trigger: TTGTCTATCCAGCATCCTCCATCTGCAGCAATCAGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTACTGATTGCTGCAGATaGAGGATGCTGGATAGACAA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTTDCCR*RMLDRQ
Trigger: TTGTCTATCCAGCATCCTCCATCTGCAGCAATCAGT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKCGCSH*RASTED
Trigger: ATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTGCATGGGGTTTAGGTaGACGGTAGACGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFCMGFR*TVDATP
Trigger: TGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTGGAGCAGCACTGAATaGATTGCTAATAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKWSSTE*IANRVG
Trigger: GCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEVAIDT*ISDLGL
Trigger: CAAACCCAAGTCTGAAATCCACGTGTCTATGGCCAC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCCTCATGATATCCATTaGTTCTACTTCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALIPHDIH*FYFFFH
Trigger: GTGAAAGAAGAAGTAGAACCAATGGATATCATGAGG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGAACAGATGGTCCGAGTaGATACTTTCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMNRWSE*ILSVQA
Trigger: AGCCTGGACTGAAAGTATCCACTCGGACCATCTGTT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGAACAGATGGTCCGAGTaGATACTTTCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKNRWSE*ILSVQA
Trigger: AGCCTGGACTGAAAGTATCCACTCGGACCATCTGTT...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSCKRPT*AFEGQA
Trigger: TGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACA...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCACGTCTGGAGATGTGTaGTACATACAATTAACAGCA +
Preference number: 4 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGTSGDV*YIQLTA
Trigger: TGCTGTTAATTGTATGTACCACACATCTCCAGACGT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCTCCTTTATTAACGTCTaGAGATGTGTGGTACATACA +
Preference number: 4 (lower is better)
Translates to: RGAPERKKAAHYVQSALISFINV*RCVVHT
Trigger: TGTATGTACCACACATCTCCAGACGTTAATAAAGGA...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFINRGNC*ELISTW
Trigger: CCAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259234.10
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTTTGTAGTCATGATGTaGTGCAGGTTACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKFVVMM*CRLLGW
Trigger: CCATCCCAGTAACCTGCATCACATCATGACTACAAA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTGGCCTACTAAGTGCTaGATCAGTAGCATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMWPTKC*ISSMRR
Trigger: GCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGACTGGGCAGGACGCTaGATACTGATTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKDWAGR*ILIAAD
Trigger: ATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGACTGGGCAGGACGCTaGATACTGATTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFDWAGR*ILIAAD
Trigger: ATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGAGGAGAAGTGTGCGTaGTCTGCTGGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVEEKCA*SAGAPP
Trigger: AGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTGGACACGGAACTGGTaGTTGGGGTGTAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKWTRNW*LGCRYV
Trigger: CACATACCTACACCCCAATCACCAGTTCCGTGTCCA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCAGAAACTGGCCTCATaGTATCCATTGGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSQKLAS*YPLVLL
Trigger: AAGTAGAACCAATGGATATCATGAGGCCAGTTTCTG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCCTTTCTTCTCCTCTTTaGCCCGGACGTCACTGTACC +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFLSSPL*PGRHCT
Trigger: GGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAG...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCAGTCTCTGGCTTCACTaGTTTGATCCATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSSLWLH*FDPSQV
Trigger: AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCCCAACTGGTGGACACTaGTGCATCCGGAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFPTGGH*CIRSHL
Trigger: TAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGG...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTACAAAAACCCAGTTCTaGCACACGCAAGACAGACGA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFITKTQF*HTQDRR
Trigger: TCGTCTGTCTTGCGTGTGTCAGAACTGGGTTTTTGT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTGGTGTTGCCTGCTCTaGACCTCCACAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKWCCLL*TSTKTQ
Trigger: CTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCCTGCTGGAACTCATGTaGTCCCTGGCACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFLLELM*SLALTS
Trigger: TGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAG...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGACGGATGATAGACATTTaGACATTTGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: PASHPCHCFQLVDTDASGRMIDI*TFVVMM
Trigger: CATCATGACTACAAATGTGCAAATGTCTATCATCCG...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTACGCTGAATACTGATTaGTGCAGATGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFITLNTD*CRWRML
Trigger: CAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTAGGAATGGTGTTGGTTaGCAAAATAGGTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTRNGVG*QNRCYC
Trigger: ACAGTAGCACCTATTTTGGCAACCAACACCATTCCT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGAAGTGTGCGTGATCTaGTGGGGCACCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSEVCVI*WGTTLA
Trigger: CGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTGGGGTGTAGGTATGTaGCGCCAGTGGGTATGCAGA +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMWGVGM*RQWVCR
Trigger: TCTGCATACCCACTGGCGGCACATACCTACACCCCA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGCGGGGGACTGGCTGCTaGAATCATAGTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKRGTGC*NHSWNG
Trigger: ACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCG...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGGATAATCCCTTCCTaGAGGTTAGTAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTGIIPS*RLVSLS
Trigger: TGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTGTCATGGGTTCCTCTaGTTTCACACGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASCHGFL*FHTGTK
Trigger: CTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTAGCCATCCTTGTCATTaGTTCCAACTGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFISHPCH*FQLVDT
Trigger: AGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAGCCATCCTTGTCATTaGTTCCAACTGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASSHPCH*FQLVDT
Trigger: AGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTYGVA*SEPPQK
Trigger: TTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTACTTATGGTGTTGCCTaGTCTGAACCTCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTTYGVA*SEPPQK
Trigger: TTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGCTGATGCGACAGCATaGTGTGTCGACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKADATA*CVDNIC
Trigger: GCAGATGTTGTCGACACACCATGCTGTCGCATCAGC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGCTGATGCGACAGCATaGTGTGTCGACAACATCTGC +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFADATA*CVDNIC
Trigger: GCAGATGTTGTCGACACACCATGCTGTCGCATCAGC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCTGGGGCACCACCTTaGCGACTGGGATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVAGAPP*RLGCLR
Trigger: CCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGTGTGCGTGATCTGCTaGGGCACCACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSVCVIC*GTTLAT
Trigger: AGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACAC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINPWPQD*ERPDVR
Trigger: CCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQPWPQD*ERPDVR
Trigger: CCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCACTTCGGGTTTCCATaGCCACAGGATTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMHFGFP*PQDWER
Trigger: CCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGCATGGGGTTTAGGTaGACGGTAGACGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYCMGFR*TVDATP
Trigger: TGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGTTGGCCACAATTGTaGCTCCATCTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGWPQL*LHLPTP
Trigger: TGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTGGAGCAGCACTGAATaGATTGCTAATAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIWSSTE*IANRVG
Trigger: GCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTGGAGCAGCACTGAATaGATTGCTAATAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASWSSTE*IANRVG
Trigger: GCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMLALWL*VCTTVV
Trigger: AACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTGATCATTATTTTGATTaGATACAGTCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFDHYFD*IQSPWT
Trigger: TGTCCATGGAGACTGTATCCAATCAAAATAATGATC...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGGGCTGCTGGGCAGTTaGAGGGACGGCAATGGTAGG +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFGLLGS*RDGNGR
Trigger: CCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCCTCATGATATCCATTaGTTCTACTTCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAPHDIH*FYFFFH
Trigger: GTGAAAGAAGAAGTAGAACCAATGGATATCATGAGG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTCACCAGAAGACTCTTaGCAGTGGACTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMSPEDS*QWTSHH
Trigger: ATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCAAGAACCGAATGGGGTaGGTGGAAGAGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSKNRMG*VEEVLF
Trigger: AAATAAAACCTCTTCCACCCACCCCATTCGGTTCTT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTTAGAGTGTGAGATGTaGCAGCTCGCTTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKLECEM*QLAWCR
Trigger: ACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTTTGTAGTCATGATGTaGTGCAGGTTACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIFVVMM*CRLLGW
Trigger: CCATCCCAGTAACCTGCATCACATCATGACTACAAA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCCTGAGCTCTGGTGGCTaGGACAGTTGCTACCACAGC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSLSSGG*DSCYHS
Trigger: GCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAG...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAACCCCAACACCAGTCTaGGCTGTGATGGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVTPTPV*AVMAEF
Trigger: AAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVAGWIP*ICRACD
Trigger: ATCGCATGCTCGACATATTCAAGGGATCCAGCCAGC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFGYPGY*WVLAGS
Trigger: GGATCCAGCCAGCACCCATCAGTACCCAGGGTATCC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQGYPGY*WVLAGS
Trigger: GGATCCAGCCAGCACCCATCAGTACCCAGGGTATCC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTGGACTTTCCAGCCTTaGGCACGACAGGATACTCCT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMWTFQP*ARQDTP
Trigger: AGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTAGGACACGGTCTTTATaGTCTAAAACCTTAAGCATG +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTRTRSL*SKTLSM
Trigger: CATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASNRGNC*ELISTC
Trigger: ACAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS-3UTR GCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGCTGGAACTCATGTaGTCCCTGGCACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVLLELM*SLALTS
Trigger: TGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCACCACAACAGGCTCTTaGTTCTCCTCCCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSTTTGS*FSSRDW
Trigger: CCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGCTGAATCAGTAGCATaGGCCGCTGTCGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYAESVA*AAVVVM
Trigger: CATCACTACGACAGCGGCGCATGCTACTGATTCAGC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCTGAATACTGATTGCTaGAGATGGAGGATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFILNTDC*RWRMLD
Trigger: ATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTAGGTGCTACTGTGGCTaGAGCCACTGGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFRCYCG*SHWRAS
Trigger: ACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGAAGTGTGCGTGATCTaGTGGGGCACCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINEVCVI*WGTTLA
Trigger: CGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGAAGTGTGCGTGATCTaGTGGGGCACCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQEVCVI*WGTTLA
Trigger: CGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMLGTDG*WLDPLN
Trigger: ATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGAGCCAGTGGAGGAACTaGAGAAACTGGCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKSQWRN*RNWPHD
Trigger: ATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGTTGTTTGCCAGCAATaGAAGAGATGGAGACACAGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASVVCQQ*KRWRHS
Trigger: ACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAAC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGTTGTTTGCCAGCAATaGAAGAGATGGAGACACAGT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIVVCQQ*KRWRHS
Trigger: ACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAAC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCATGGACAAGTTGTTTaGCAGCAATGCAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIHGQVV*QQCKRW
Trigger: CCATCTCTTGCATTGCTGGCAAACAACTTGTCCATG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATCTGTTGAGATCACATaGTGTTGCTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKESVEIT*CCFRGF
Trigger: AAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCACTTCTCATCATCAGTaGTGTTTGTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSTSHHQ*CLSPSC
Trigger: ACATGATGGAGACAAACAGCACTGATGATGAGAAGT...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAATTGACTGTAGCAGCTaGGTTTATCAATCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEIDCSS*VYQSSR
Trigger: TCTGCTGGATTGATAAACCCAGCTGCTACAGTCAAT...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTTCTCCTCCCGGGACTaGAGGGAGCTGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINFSSRD*RELLEL
Trigger: GAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTTCTCCTCCCGGGACTaGAGGGAGCTGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFFSSRD*RELLEL
Trigger: GAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATGTGATGCAGGTTACTaGGATGGCCCTGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVCDAGY*DGPVVH
Trigger: GTGGACAACAGGGCCATCCCAGTAACCTGCATCACA...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGGAGGTGGTCACAGGTaGCCGAGACTGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSGGGHR*PRLDWL
Trigger: CAACCAATCCAGTCTCGGCCACCTGTGACCACCTCC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGGAGACTGAGCTCTaGTGGCTGAGACAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVLETEL*WLRQLL
Trigger: TAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACCTGGAGACTGAGCTCTaGTGGCTGAGACAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYLETEL*WLRQLL
Trigger: TAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAG...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGTGTGCGTGATCTGCTaGGGCACCACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFVCVIC*GTTLAT
Trigger: AGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACAC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGGTACTGATGGGTGCTaGCTGGATCCCTTGAATATG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKGTDGC*LDPLNM
Trigger: CATATTCAAGGGATCCAGCCAGCACCCATCAGTACC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACCAATGGGGGCCGGCTaGATACCCTGGGTACTGATG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQPMGAG*IPWVLM
Trigger: CATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTCCCTGTGTGCCAAGTaGTGCAGGCTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVSLCAK*CRLYPW
Trigger: CCAGGGATACAGCCTGCACCACTTGGCACACAGGGA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGCACGGTTGTTGCTGCTaGAGCAGCACTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKHGCCC*SSTEWI
Trigger: AATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTG...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGTCAGCTGTAGTAACTaGGCAGCACAGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYVSCSN*AAQRWT
Trigger: AGTCCACCTCTGTGCTGCCCAGTTACTACAGCTGAC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGTCATTGCTTCCAACTaGTGGACACTGATGCATCCG +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFVIASN*WTLMHP
Trigger: CGGATGCATCAGTGTCCACCAGTTGGAAGCAATGAC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGAAGAACCGAATGGGGTaGGTGGAAGAGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMKNRMG*VEEVLF
Trigger: AAATAAAACCTCTTCCACCCACCCCATTCGGTTCTT...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGGCAGAAGAACCGAATaGGGTGGGTGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYGRRTE*GGWKRF
Trigger: AAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACGTCTGGAGATGTGTaGTACATACAATTAACAGCA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTSGDV*YIQLTA
Trigger: TGCTGTTAATTGTATGTACCACACATCTCCAGACGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACCACTGTTTGCAATCTaGGAAGGGGCCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQPLFAI*EGAWLS
Trigger: GCTGAGCCAGGCCCCTTCTCAGATTGCAAACAGTGG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAAGCATTTGGCAGCTGTaGGGTCGGCCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQSIWQL*GRPQDC
Trigger: ACAGTCCTGAGGCCGACCTCACAGCTGCCAAATGCT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGCTGTACTGCTGGCTaGGCAGTAGCAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVCCTAG*AVAAFG
Trigger: GCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGGATTGGTTGGTGAATaGTGTGCTGTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMGLVGE*CAVLLA
Trigger: AGCCAGCAGTACAGCACATCATTCACCAACCAATCC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGGCGACTGGGATGTTTaGGGTGGTCACAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINGDWDV*GGHSSS
Trigger: GCTACTGCTGTGACCACCTCAAACATCCCAGTCGCC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGGCGACTGGGATGTTTaGGGTGGTCACAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQGDWDV*GGHSSS
Trigger: GCTACTGCTGTGACCACCTCAAACATCCCAGTCGCC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCCACCAGTCTGAGCTGTaGTGGCAGAGTTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSHQSEL*WQSLEP
Trigger: AGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTG...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCGCTCCAGGAATGGTTaGAAGGGCAACGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINRSRNG*KGNGWL
Trigger: CAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTATAAACCGGAAGGCTaGAAAACACCAGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFYKPEG*KTPASH
Trigger: ATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCACAAAAACCCAGTTCTaGCACACGCAAGACAGACGA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFTKTQF*HTQDRR
Trigger: TCGTCTGTCTTGCGTGTGTCAGAACTGGGTTTTTGT...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTTTCAGAACAAGGATCTaGGAGCAACTTATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIFRTRI*EQLMVL
Trigger: CAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAA...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAGCAGAACCACTGTTTaGAATCTGAGAAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYSRTTV*NLRRGL
Trigger: CAGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCCGGATGATAGACATTTaGACATTTGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSRMIDI*TFVVMM
Trigger: CATCATGACTACAAATGTGCAAATGTCTATCATCCG...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGGGGTGTAGGTATGTaGCGCCAGTGGGTATGCAGA +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVWGVGM*RQWVCR
Trigger: TCTGCATACCCACTGGCGGCACATACCTACACCCCA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCTGGGGTGTAGGTATGTaGCGCCAGTGGGTATGCAGA +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSWGVGM*RQWVCR
Trigger: TCTGCATACCCACTGGCGGCACATACCTACACCCCA...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGATGTCGAGCATGCGATaGATCCACTGTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKMSSMR*IHCHQL
Trigger: CAGTTGATGACAGTGGATGCATCGCATGCTCGACAT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACTGTGTGCCAAGTGGTaGAGGCTGTATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQLCAKW*RLYPWG
Trigger: ACCCCAGGGATACAGCCTGCACCACTTGGCACACAG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCTGTGTGCCAAGTGGTaGAGGCTGTATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFLCAKW*RLYPWG
Trigger: ACCCCAGGGATACAGCCTGCACCACTTGGCACACAG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAAGTGAATTCCCTGTGTaGCAAGTGGTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVSEFPV*QVVQAV
Trigger: TACAGCCTGCACCACTTGGCACACAGGGAATTCACT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTCTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVLHHGC*CWSSTE
Trigger: TTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAG...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACTCTGGCTGTGGGTCTaGACCACGGTTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQLWLWV*TTVVAA
Trigger: AGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSVSSGV*LAVAMS
Trigger: GCTCATCGCCACGGCCAAGCATACTCCGGAAGAAAC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGAGCCATCCTTGTCATTaGTTCCAACTGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKSHPCH*FQLVDT
Trigger: AGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACACTGGAGGGAGCTGCTaGAACTCATGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINTGGSC*NSCAPW
Trigger: CCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGGCCGAGACTGGATTaGTTGGTGAATGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYWPRLD*LVNDVL
Trigger: CAGCACATCATTCACCAACCAATCCAGTCTCGGCCA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTACAGGAGGGATGGCATTaGAGGTGGTCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLQEGWH*RWSQVA
Trigger: GGCCACCTGTGACCACCTCCAATGCCATCCCTCCTG...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGCAGATGGAGGATGCTaGATAGACAAGGTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVADGGC*IDKVGL
Trigger: TAGGCCAACCTTGTCTATCCAGCATCCTCCATCTGC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMVAWEE*EGTVMV
Trigger: TACCATGACAGTACCCTCCCATTCCTCCCATGCTAC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCCACGGAACTGGTGATTaGGGTGTAGGTATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSHGTGD*GVGMCR
Trigger: GCGGCACATACCTACACCCCAATCACCAGTTCCGTG...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGGTACTGATGGGTGCTaGCTGGATCCCTTGAATATG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYGTDGC*LDPLNM
Trigger: CATATTCAAGGGATCCAGCCAGCACCCATCAGTACC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTGGAGCAGCACTGAATaGATTGCTAATAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFWSSTE*IANRVG
Trigger: GCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCACGGTTGTTGCTGCTaGAGCAGCACTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMHGCCC*SSTEWI
Trigger: AATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTTGGTGCTAGCACTCTaGCTGTGGGTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINLVLAL*LWVCTT
Trigger: CGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTTGGTGCTAGCACTCTaGCTGTGGGTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFLVLAL*LWVCTT
Trigger: CGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTCCTCATGATATCCATTaGTTCTACTTCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTPHDIH*FYFFFH
Trigger: GTGAAAGAAGAAGTAGAACCAATGGATATCATGAGG...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACATCCTTTCACGCCCTTaGATGTCATGGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYILSRP*MSWVPL
Trigger: CAGAGGAACCCATGACATCCAAGGGCGTGAAAGGAT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGTCATTGCTTCCAACTaGTGGACACTGATGCATCCG +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMVIASN*WTLMHP
Trigger: CGGATGCATCAGTGTCCACCAGTTGGAAGCAATGAC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAAGAACCGAATGGGGTaGGTGGAAGAGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASKNRMG*VEEVLF
Trigger: AAATAAAACCTCTTCCACCCACCCCATTCGGTTCTT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGTTTGGCACCATCTGTaGCAGGTTTCTTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVVWHHL*QVSSGV
Trigger: TACTCCGGAAGAAACCTGCCACAGATGGTGCCAAAC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATGTGCTCCCTGGCACTaGCTTCAGAATCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQCAPWH*LQNLDQ
Trigger: CTGGTCGAGATTCTGAAGTCAGTGCCAGGGAGCACA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTGCAACAGGTGTGGCTaGTGCGACAGCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINCNRCG*CDSMVC
Trigger: ACACACCATGCTGTCGCATCAGCCACACCTGTTGCA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGCCACAGGAATGGCTaGAGCTTGAGGGATGCTACT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVCHRNG*SLRDAT
Trigger: AGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATGCTGTACTGCTGGCTaGGCAGTAGCAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQCCTAG*AVAAFG
Trigger: GCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTGCTGTACTGCTGGCTaGGCAGTAGCAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFCCTAG*AVAAFG
Trigger: GCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGACTGGATTGGTTGGTaGATGATGTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMDWIGW*MMCCTA
Trigger: AGCAGTACAGCACATCATTCACCAACCAATCCAGTC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTGGCCTACTAAGTGCTaGATCAGTAGCATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFWPTKC*ISSMRR
Trigger: GCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGTCCCTAATGCAGGGTaGGATGGTAGTGTGATTCTT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYVPNAG*DGSVIL
Trigger: AAGAATCACACTACCATCTCACCCTGCATTAGGGAC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGTCCCTAATGCAGGGTaGGATGGTAGTGTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVVPNAG*DGSVIL
Trigger: AAGAATCACACTACCATCTCACCCTGCATTAGGGAC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTCCAGCTGTGGTCGCTaGAGGAATGGTGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINSSCGR*RNGVGC
Trigger: GCAACCAACACCATTCCTTCAGCGACCACAGCTGGA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTCCAGCTGTGGTCGCTaGAGGAATGGTGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFSSCGR*RNGVGC
Trigger: GCAACCAACACCATTCCTTCAGCGACCACAGCTGGA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGGGAGCTTGCGTGTGTaGCACAGATCCAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLGSLRV*HRSSCG
Trigger: ACCACAGCTGGATCTGTGTCACACACGCAAGCTCCC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGAGGCTGAGGAGGAATaGGGGTTTTCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINEAEEE*GFSELP
Trigger: TGGCAGTTCGGAAAACCCTCATTCCTCCTCAGCCTC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGTCACCTTCTTCTGTTaGGATCACATGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKVTFFC*DHMLLL
Trigger: AAGCAACAGCATGTGATCTCAACAGAAGAAGGTGAC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGACAAAAACCCAGTTCTaGCACACGCAAGACAGACGA +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMTKTQF*HTQDRR
Trigger: TCGTCTGTCTTGCGTGTGTCAGAACTGGGTTTTTGT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCGGATGATAGACATTTaGACATTTGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMRMIDI*TFVVMM
Trigger: CATCATGACTACAAATGTGCAAATGTCTATCATCCG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCGGATGATAGACATTTaGACATTTGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKRMIDI*TFVVMM
Trigger: CATCATGACTACAAATGTGCAAATGTCTATCATCCG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINLHHGC*CWSSTE
Trigger: TTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGCATGGACAAGTTGTTTaGCAGCAATGCAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKHGQVV*QQCKRW
Trigger: CCATCTCTTGCATTGCTGGCAAACAACTTGTCCATG...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCACTTCTCATCATCAGTaGTGTTTGTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASTSHHQ*CLSPSC
Trigger: ACATGATGGAGACAAACAGCACTGATGATGAGAAGT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGCTCAGTATGGGGCCTaGAGGAATCCACTAGATAAA +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMAQYGA*RNPLDK
Trigger: TTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCTGTGATGCAGGTTACTaGGATGGCCCTGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSCDAGY*DGPVVH
Trigger: GTGGACAACAGGGCCATCCCAGTAACCTGCATCACA...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCACTGATTGCTGCAGATaGAGGATGCTGGATAGACAA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFTDCCR*RMLDRQ
Trigger: TTGTCTATCCAGCATCCTCCATCTGCAGCAATCAGT...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINCGCSH*RASTED
Trigger: ATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTACTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLLGRVV*LDPRRS
Trigger: ACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAG...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACGATCATTATTTTGATTaGATACAGTCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNDHYFD*IQSPWT
Trigger: TGTCCATGGAGACTGTATCCAATCAAAATAATGATC...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGCTGCAATCATAGTTaGAATGGTCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVCCNHS*NGRWGL
Trigger: CAGCCCCCACCGACCATTCCAACTATGATTGCAGCA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGCATCAATATACTCCTTaGGAGGAGACTTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKHQYTP*EETCAS
Trigger: AGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATG...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGGGTCTTGGACGCACTaGGACATATCTCACACCTTC +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSGSWTH*DISHTF
Trigger: GAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGTCAGCTGTAGTAACTaGGCAGCACAGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVVSCSN*AAQRWT
Trigger: AGTCCACCTCTGTGCTGCCCAGTTACTACAGCTGAC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTAGTTCGTTTATTCGGTaGAGATCATCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFISSFIR*RSSSVA
Trigger: AGCAACAGATGATGATCTCCACCGAATAAACGAACT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAGTTCGTTTATTCGGTaGAGATCATCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASSSFIR*RSSSVA
Trigger: AGCAACAGATGATGATCTCCACCGAATAAACGAACT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAACAGATGGTCCGAGTaGATACTTTCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYNRWSE*ILSVQA
Trigger: AGCCTGGACTGAAAGTATCCACTCGGACCATCTGTT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFCKRPT*AFEGQA
Trigger: TGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGTCCTTTATTAACGTCTaGAGATGTGTGGTACATACA +
Preference number: 4 (lower is better)
Translates to: EKHQPAILVIASNWWTLMSFINV*RCVVHT
Trigger: TGTATGTACCACACATCTCCAGACGTTAATAAAGGA...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACAAGTCCCTCCGAAAATaGAAGTGGCACTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINKSLRK*KWHCWR
Trigger: ACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATGCCACAGGAATGGCTaGAGCTTGAGGGATGCTACT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQCHRNG*SLRDAT
Trigger: AGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTGCCACAGGAATGGCTaGAGCTTGAGGGATGCTACT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFCHRNG*SLRDAT
Trigger: AGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACACCCCAACACCAGTCTaGGCTGTGATGGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINTPTPV*AVMAEF
Trigger: AAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFVDWGC*VNSLCA
Trigger: GGCACACAGGGAATTCACTCAGCAACCCCAATCAAC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGTCACCTTCTTCTGTTaGGATCACATGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYVTFFC*DHMLLL
Trigger: AAGCAACAGCATGTGATCTCAACAGAAGAAGGTGAC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCTTTCTTCTCCTCTTTaGCCCGGACGTCACTGTACC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFLSSPL*PGRHCT
Trigger: GGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFMSSQL*SFHALG
Trigger: TCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACAT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTAAACCCTTTAGAGTGTaGGATGTGGCAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVKPFRV*DVAARL
Trigger: CAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTTCAGAACAAGGATCTaGGAGCAACTTATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFFRTRI*EQLMVL
Trigger: CAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACCTGAATACTGATTGCTaGAGATGGAGGATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYLNTDC*RWRMLD
Trigger: ATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAG...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCTGAATACTGATTGCTaGAGATGGAGGATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMLNTDC*RWRMLD
Trigger: ATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGAGGAATGGTGTTGGTTaGCAAAATAGGTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKRNGVG*QNRCYC
Trigger: ACAGTAGCACCTATTTTGGCAACCAACACCATTCCT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCTGAGTACCCATAGGTaGAGGCTGAAGCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINLSTHR*RLKPLC
Trigger: ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTACTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLLHHGC*CWSSTE
Trigger: TTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAG...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGAGGGTTTTCCGAACTaGCATTCCATCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINEGFPN*HSICGR
Trigger: CCTGCCACAGATGGAATGGCAGTTCGGAAAACCCTC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCGGGGGACTGGCTGCTaGAATCATAGTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINRGTGC*NHSWNG
Trigger: ACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACGGGGGACTGGCTGCTaGAATCATAGTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQRGTGC*NHSWNG
Trigger: ACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCACAAGTTTACACCTCTaGATATTTCCCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: SINRKAEKHQPAILVIASTSLHL*IFPCIS
Trigger: ACTGATACAGGGAAATATGCAGAGGTGTAAACTTGT...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTTGGTGCCGTGGCACTaGTGTAAAAGGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINLVPWH*CKRPTW
Trigger: CCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGGCAGCTCGCTTGGTaGCGTGGCACTGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLWQLAW*RGTAVK
Trigger: TTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATGTGATGCAGGTTACTaGGATGGCCCTGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQCDAGY*DGPVVH
Trigger: GTGGACAACAGGGCCATCCCAGTAACCTGCATCACA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCTGGAGACTGAGCTCTaGTGGCTGAGACAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFLETEL*WLRQLL
Trigger: TAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCAGATGGAGGATGCTaGATAGACAAGGTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVADGGC*IDKVGL
Trigger: TAGGCCAACCTTGTCTATCCAGCATCCTCCATCTGC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLCGCSH*RASTED
Trigger: ATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTGCTGCAATCATAGTTaGAATGGTCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFCCNHS*NGRWGL
Trigger: CAGCCCCCACCGACCATTCCAACTATGATTGCAGCA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGAGGAACTGCAGAAACTaGCCTCATGATATCCATTGG +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMRNCRN*PHDIHW
Trigger: CCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACATCAATATACTCCTTaGGAGGAGACTTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVHQYTP*EETCAS
Trigger: AGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCATCAATATACTCCTTaGGAGGAGACTTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMHQYTP*EETCAS
Trigger: AGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAACGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCGCCCTTGGATGTCATaGGTTCCTCTGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINRPWMS*VPLLSH
Trigger: GTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGGATTGGTTGGTGAATaGTGTGCTGTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFGLVGE*CAVLLA
Trigger: AGCCAGCAGTACAGCACATCATTCACCAACCAATCC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGACTGGGCAGGACGCTaGATACTGATTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLDWAGR*ILIAAD
Trigger: ATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTATTGGGGTTGCTGAGTaGATTCCCTGTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFIGVAE*IPCVPS
Trigger: ACTTGGCACACAGGGAATTCACTCAGCAACCCCAAT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCAGAAACTGGCCTCATaGTATCCATTGGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMQKLAS*YPLVLL
Trigger: AAGTAGAACCAATGGATATCATGAGGCCAGTTTCTG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACCTGGCTTCACTGATTTaGTCCATCACAAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYLASLI*SITSLH
Trigger: GTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAG...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAAGTCTCTGGCTTCACTaGTTTGATCCATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVSLWLH*FDPSQV
Trigger: AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAATGTCCAGTCAGCTCTaGTCCTTTCACGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLMSSQL*SFHALG
Trigger: TCCAAGGGCGTGAAAGGATCAGAGCTGACTGGACAT...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAAGCAGAACCACTGTTTaGAATCTGAGAAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQSRTTV*NLRRGL
Trigger: CAGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAAATGATGTGCTGTACTaGTGGCTGAGCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQNDVLY*WLSSSS
Trigger: GCTGCTACTGCTCAGCCAGCAGTACAGCACATCATT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCACGCTGAATACTGATTaGTGCAGATGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSTLNTD*CRWRML
Trigger: CAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGGTTGCCAAAATAGGTaGTACTGTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLGCQNR*YCGCSH
Trigger: GTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGAGGAATGGTGTTGGTTaGCAAAATAGGTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: MGSSAFTRELRNTSFISMRNGVG*QNRCYC
Trigger: ACAGTAGCACCTATTTTGGCAACCAACACCATTCCT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGACTTCTCATCATCAGTaGTGTTTGTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKTSHHQ*CLSPSC
Trigger: ACATGATGGAGACAAACAGCACTGATGATGAGAAGT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAACATCTGCACCTGTaGATAGGGCCTTACCACAAC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFQHLHL*IGPYHN
Trigger: GTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCAACATCTGCACCTGTaGATAGGGCCTTACCACAAC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINQHLHL*IGPYHN
Trigger: GTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTGCAGGTTACTGGGATaGCCCTGTTGTCCACTGATT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINCRLLG*PCCPLI
Trigger: AATCAGTGGACAACAGGGCCATCCCAGTAACCTGCA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGATGTGCTGTACTGCTaGCTGAGCAGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFDVLYC*LSSSSI
Trigger: AATGCTGCTACTGCTCAGCCAGCAGTACAGCACATC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGTCGTAGTGATGACTaGAGACTGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLCRSDD*RLSSGG
Trigger: GCCACCAGAGCTCAGTCTCCAGTCATCACTACGACA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACGCAGATGGAGGATGCTaGATAGACAAGGTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINADGGC*IDKVGL
Trigger: TAGGCCAACCTTGTCTATCCAGCATCCTCCATCTGC...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAATTGCTTCCAACTGGTaGACACTGATGCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQIASNW*TLMHPE
Trigger: CTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAAT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGTCACCTTCTTCTGTTaGGATCACATGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSVTFFC*DHMLLL
Trigger: AAGCAACAGCATGTGATCTCAACAGAAGAAGGTGAC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACACGCTGAATACTGATTaGTGCAGATGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINTLNTD*CRWRML
Trigger: CAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGTTGTTTGCCAGCAATaGAAGAGATGGAGACACAGT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSVVCQQ*KRWRHS
Trigger: ACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAAC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGCAGGTTACTGGGATaGCCCTGTTGTCCACTGATT +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLCRLLG*PCCPLI
Trigger: AATCAGTGGACAACAGGGCCATCCCAGTAACCTGCA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGGCCGAGACTGGATTaGTTGGTGAATGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLWPRLD*LVNDVL
Trigger: CAGCACATCATTCACCAACCAATCCAGTCTCGGCCA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCAGGAACTGCAGAAACTaGCCTCATGATATCCATTGG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSRNCRN*PHDIHW
Trigger: CCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTAGGAACTGCAGAAACTaGCCTCATGATATCCATTGG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVRNCRN*PHDIHW
Trigger: CCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACAACAGATGGTCCGAGTaGATACTTTCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINNRWSE*ILSVQA
Trigger: AGCCTGGACTGAAAGTATCCACTCGGACCATCTGTT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVCKRPT*AFEGQA
Trigger: TGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAACGTCTGGAGATGTGTaGTACATACAATTAACAGCA +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVTSGDV*YIQLTA
Trigger: TGCTGTTAATTGTATGTACCACACATCTCCAGACGT...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGGATACTCCTTTCTaGTTAGCTATTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFQDTPF*LAISCS
Trigger: GCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCAGGATACTCCTTTCTaGTTAGCTATTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINQDTPF*LAISCS
Trigger: GCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCATCCGGAGTCACTTATaGCACAGATCAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSIRSHL*HRSGLT
Trigger: TGTTAAACCTGATCTGTGTCATAAGTGACTCCGGAT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINNRGNC*ELISTC
Trigger: ACAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS-3UTR GCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCAGGAATGGTGTTGGTTaGCAAAATAGGTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSRNGVG*QNRCYC
Trigger: ACAGTAGCACCTATTTTGGCAACCAACACCATTCCT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGTTGTTTGCCAGCAATaGAAGAGATGGAGACACAGT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQVVCQQ*KRWRHS
Trigger: ACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAAC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTCTGTTGAGATCACATaGTGTTGCTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVSVEIT*CCFRGF
Trigger: AAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACCTCATGATATCCATTaGTTCTACTTCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VWRCVVHTINSITPATEVPHDIH*FYFFFH
Trigger: GTGAAAGAAGAAGTAGAACCAATGGATATCATGAGG...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTCACCAGAAGACTCTTaGCAGTGGACTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFSPEDS*QWTSHH
Trigger: ATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTAAGAACCGAATGGGGTaGGTGGAAGAGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVKNRMG*VEEVLF
Trigger: AAATAAAACCTCTTCCACCCACCCCATTCGGTTCTT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTGTAAAAGGCCAACATaGGCATTTGAAGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINCKRPT*AFEGQA
Trigger: TGCCTGACCTTCAAATGCCCATGTTGGCCTTTTACA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTCCTTTATTAACGTCTaGAGATGTGTGGTACATACA +
Preference number: 4 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYSFINV*RCVVHT
Trigger: TGTATGTACCACACATCTCCAGACGTTAATAAAGGA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCTGGCTTCACTGATTTaGTCCATCACAAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFLASLI*SITSLH
Trigger: GTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCAGGACACGGTCTTTATaGTCTAAAACCTTAAGCATG +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSRTRSL*SKTLSM
Trigger: CATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTAGGACACGGTCTTTATaGTCTAAAACCTTAAGCATG +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVRTRSL*SKTLSM
Trigger: CATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCT...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTTCAGAACAAGGATCTaGGAGCAACTTATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINFRTRI*EQLMVL
Trigger: CAACACCATAAGTTGCTCTCAGATCCTTGTTCTGAA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGGGATAATCCCTTCCTaGAGGTTAGTAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQGIIPS*RLVSLS
Trigger: TGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCAGTTCGTTTATTCGGTaGAGATCATCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSSSFIR*RSSSVA
Trigger: AGCAACAGATGATGATCTCCACCGAATAAACGAACT...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR TCA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTACTGGCTTCACTGATTTaGTCCATCACAAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLLASLI*SITSLH
Trigger: GTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAG...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAACGTCTGGAGATGTGTaGTACATACAATTAACAGCA +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQTSGDV*YIQLTA
Trigger: TGCTGTTAATTGTATGTACCACACATCTCCAGACGT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAACAAGTTTACACCTCTaGATATTTCCCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQTSLHL*IFPCIS
Trigger: ACTGATACAGGGAAATATGCAGAGGTGTAAACTTGT...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR GCA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTACAAGTTTACACCTCTaGATATTTCCCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: KRFYFQCREITDGPSGYFTSLHL*IFPCIS
Trigger: ACTGATACAGGGAAATATGCAGAGGTGTAAACTTGT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGATCATTATTTTGATTaGATACAGTCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: FYFQCREITDGPSGYFQSDHYFD*IQSPWT
Trigger: TGTCCATGGAGACTGTATCCAATCAAAATAATGATC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGATCATTATTTTGATTaGATACAGTCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: QITKNVLQNKDLRATYGVDHYFD*IQSPWT
Trigger: TGTCCATGGAGACTGTATCCAATCAAAATAATGATC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CCA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACTCCTTTATTAACGTCTaGAGATGTGTGGTACATACA +
Preference number: 4 (lower is better)
Translates to: NLFESFINVWRCVVHTINSFINV*RCVVHT
Trigger: TGTATGTACCACACATCTCCAGACGTTAATAAAGGA...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp AGCCGCCGCCCGCCGCCCGCACCGCCCGCTTCTATCTCGCCGGCCTaGGGGTGCCGCGGAGGGCCCATCTCGGCGGCGGCGATGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SRRPPPAPPASISPA*GCRGGPISAAAMCS
Trigger: CGAGCACATCGCCGCCGCCGAGATGGGCCCTCCGCGGCACCCCCAGGCCGGCGAGATAGAAGCGGGCGGTGCGGGCGGCGGGCGGCGGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS CCA 90 bp GGCCGTGGCGATGAGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTaGCTGTGGGTCTGCACCACGGTTGTTGCTGCTGGAGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: GRGDEPWAGALVLAL*LWVCTTVVAAGAAL
Trigger: CAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GCCTGGCTCAGCCCGGTAGAAGGGGCTCCTAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGTAGCCGCCGCCCGCCGCCCGCACCG +
Preference number: 5 (lower is better)
Translates to: AWLSPVEGAPNRGNC*ELISTCSRRPPPAP
Trigger: CGGTGCGGGCGGCGGGCGGCGGCTACAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCTGAGCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS CCA 90 bp GTGGCAGGTTTCTTCCGGAGTATGCTTGGCCGTGGCGATGAGCCCTaGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTGGGTCTGCACC +
Preference number: 5 (lower is better)
Translates to: VAGFFRSMLGRGDEP*AGALVLALWLWVCT
Trigger: GGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GGCGATGAGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTTGCTGCTGGAGCAGCACTGAATGGA +
Preference number: 5 (lower is better)
Translates to: GDEPWAGALVLALWL*VCTTVVAAGAALNG
Trigger: TCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp TCCATCTGTGGCAGGTTTCTTCCGGAGTATGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: SICGRFLPEYAWPWR*ALGGSVGASTLAVG
Trigger: ACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp ACCATCTGTGGCAGGTTTCTTCCGGAGTATGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: TICGRFLPEYAWPWR*ALGGSVGASTLAVG
Trigger: ACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS-3UTR CAA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RGAPERKKAAHYVQSALIPWAGA*VLALWL
Trigger: CAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGG...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp TCCTCTCGGCAGGGTAGTCTGGCTGGATCCGAGGAGAAGTGTGCGTaGTCTGCTGGGGCACCACCTTGGCGACTGGGATGTTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SSRQGSLAGSEEKCA*SAGAPPWRLGCLRW
Trigger: CCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp GAGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTGGGTCTaGACCACGGTTGTTGCTGCTGGAGCAGCACTGAATGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: EPWAGALVLALWLWV*TTVVAAGAALNGLL
Trigger: TAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GTATCCCTGGGGTCCCAATGGGGGCCGGCTGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCCCTTGAATATGTCGAGCATGCGATG +
Preference number: 5 (lower is better)
Translates to: VSLGSQWGPAGYPGY*WVLAGSLEYVEHAM
Trigger: CATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp TGGGGTCCCAATGGGGGCCGGCTGGATACCCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAATATGTCGAGCATGCGATGCATCCAC +
Preference number: 5 (lower is better)
Translates to: WGPNGGRLDTLGTDG*WLDPLNMSSMRCIH
Trigger: GTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp ATGTCCGGAGATGGGAATCAGGCTACTCCTCTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGTGTGCGTGATCTGCTGGGGCACCAC +
Preference number: 5 (lower is better)
Translates to: MSGDGNQATPLGRVV*LDPRRSVRDLLGHH
Trigger: GTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCG +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFSMATG*GEARCP
Trigger: CGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp TGGCGTCAGGTGTGCTGGCGGGGCTGTCACTGCAACAGGTGTGGCTaGTGCGACAGCATGGTGTGTCGACAACATCTGCACCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: WRQVCWRGCHCNRCG*CDSMVCRQHLHLWI
Trigger: TATCCACAGGTGCAGATGTTGTCGACACACCATGCTGTCGCATCAGCCACACCTGTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS TCA 90 bp AACGGGAGGGCCCAAGACGGAGGAAAGACTGCCACCCACAGTGACTaGTGGAGGTGGTGCAGCTGCAATGGTGGTGATGGGTGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: NGRAQDGGKTATHSD*WRWCSCNGGDGWSD
Trigger: ATCACTCCACCCATCACCACCATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTACCACAACAGGCTCTaGCTTCTCCTCCCGGGACTG +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGYHNRL*LLLPGL
Trigger: CAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGTA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: RGAPERKKAAHYVQSALISSGVC*AVAMSP
Trigger: AGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGA...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGATGTGGCAGCTCGCTaGGTGCCGTGGCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: PASHPCHCFQLVDTDASGDVAAR*VPWHCC
Trigger: ACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp ACTGAGCTCTGGTGGCTGAGACAGTTGCTACCACAGCAGGAGGGATaGCATTGGAGGTGGTCACAGGTGGCCGAGACTGGATTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: TELWWLRQLLPQQEG*HWRWSQVAETGLVG
Trigger: ACCAACCAATCCAGTCTCGGCCACCTGTGACCACCTCCAATGCCATCCCTCCTGCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTGATCTCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RGAPERKKAAHYVQSALISLGGD*RFSAFT
Trigger: GGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGA...GATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GCTGAATCAGTAGCATGCGCCGCTGTCGTAGTGATGACTGGAGACTaGGCTCTGGTGGCTGAGACAGTTGCTACCACAGCAGGAGGGATG +
Preference number: 5 (lower is better)
Translates to: AESVACAAVVVMTGD*ALVAETVATTAGGM
Trigger: CATCCCTCCTGCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAGTCATCACTACGACAGCGGCGCATGCTACTGATTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp AGCGTTGGTGCTAGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAATGGATTGCTAATAGGGTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SVGASTLAVGLHHGC*CWSSTEWIANRVGH
Trigger: GTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GAACAGACGGTCTGTTGTCACTTCGGGTTTCCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGGAGATGGGAATCAGGCTACTCCTCT +
Preference number: 5 (lower is better)
Translates to: EQTVCCHFGFPWPQD*ERPDVRRWESGYSS
Trigger: AGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCGGGGGCCCAGGAGCATaGCTGCGGATGATAGACATT +
Preference number: 5 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLGGPGA*LRMIDI
Trigger: AATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCC...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCGGGGGCCCAGGAGCATaGCTGCGGATGATAGACATT +
Preference number: 5 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGGGPGA*LRMIDI
Trigger: AATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCC...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTGCTGGCTGGATCCCTaGAATATGTCGAGCATGCGA +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGCWLDP*NMSSMR
Trigger: TCGCATGCTCGACATATTCAAGGGATCCAGCCAGCA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTTGCAGGCTGAAGCCCTaGTGTGTTGATTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFCRLKP*CVDWGC
Trigger: GCAACCCCAATCAACACACAAGGGCTTCAGCCTGCA...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GCCGGCTGGATACCCTGGGTACTGATGGGTGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGATGCATCCACTGTCATCAACTGCATG +
Preference number: 5 (lower is better)
Translates to: AGWIPWVLMGAGWIP*ICRACDASTVINCM
Trigger: CATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp ACCCATAGGTGCAGGCTGAAGCCCTTGTGTGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCCAAGTGGTGCAGGCTGTATCCCTGG +
Preference number: 5 (lower is better)
Translates to: THRCRLKPLCVDWGC*VNSLCAKWCRLYPW
Trigger: CCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GATACAGTCTCCATGGACACAGTGACCGGAGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTGGCACCTGCAGGCCTAGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: DTVSMDTVTGVAIDT*ISDLGLAPAGLGDP
Trigger: TGGGTCACCTAGGCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGTATGAAGCTGCTGTTTaGGCGTCCCTAATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGYEAAV*ASLMQG
Trigger: ACCCTGCATTAGGGACGCCAAAACAGCAGCTTCATA...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACTGCTGGGGCACCACCTaGGCGACTGGGATGTTTGAG +
Preference number: 5 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNCWGTT*ATGMFE
Trigger: CTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCA...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSSSGVC*AVAMSP
Trigger: AGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGA...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTGATGGAGACACAGTGTaGGTAGCCAGTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFDGDTV*VASGGT
Trigger: AGTTCCTCCACTGGCTACCAACACTGTGTCTCCATC...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp TCTTGCTTCTCCTCCCGGGACTGGAGGGAGCTGCTGGAACTCATGTaGTCCCTGGCACTGACTTCAGAATCTCGACCAGATTCATCATTG +
Preference number: 5 (lower is better)
Translates to: SCFSSRDWRELLELM*SLALTSESRPDSSL
Trigger: CAATGATGAATCTGGTCGAGATTCTGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS GCA 90 bp GTTGGTGCTAGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGGATTGCTAATAGGGTTGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: VGASTLAVGLHHGCC*WSSTEWIANRVGHN
Trigger: ATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GGTGCTAGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTGCTGCTaGAGCAGCACTGAATGGATTGCTAATAGGGTTGGCCACAATTGT +
Preference number: 5 (lower is better)
Translates to: GASTLAVGLHHGCCC*SSTEWIANRVGHNC
Trigger: ACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCAGCAGAACCACTGTTaGCAATCTGAGAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAQQNHC*QSEKGP
Trigger: AGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCTG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTCCGAGACTGGATTGGTaGGTGAATGATGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFPRLDW*VNDVLY
Trigger: GTACAGCACATCATTCACCAACCAATCCAGTCTCGG...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCG +
Preference number: 5 (lower is better)
Translates to: SINRKAEKHQPAILVIASSMATG*GEARCP
Trigger: CGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTGGGTCTGCACCACGGTaGTTGCTGCTGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIGSAPR*LLLEQH
Trigger: GTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCC...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFPWAGA*VLALWL
Trigger: CAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGG...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKSSGVC*AVAMSP
Trigger: AGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCATTTCAGACTTGGGTTaGGCACCTGCAGGCCTAGGT +
Preference number: 5 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLISDLG*APAGLG
Trigger: ACCTAGGCCTGCAGGTGCCAAACCCAAGTCTGAAAT...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTATTTCAGACTTGGGTTaGGCACCTGCAGGCCTAGGT +
Preference number: 5 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAISDLG*APAGLG
Trigger: ACCTAGGCCTGCAGGTGCCAAACCCAAGTCTGAAAT...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGCTTTCTTCTCCTCTTaGACCCGGACGTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: PASHPCHCFQLVDTDASGAFFSS*TRTSLY
Trigger: GTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PASHPCHCFQLVDTDASGDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCAAACCCTTTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTCAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 5 (lower is better)
Translates to: SNPLECEMWQLAWCRGTAQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...AGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAAAGGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCACCAGCCAGCCATCCTaGTCATTGCTTCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLTSQPS*SLLPTG
Trigger: ACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGT...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCACCAGCCAGCCATCCTaGTCATTGCTTCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGTSQPS*SLLPTG
Trigger: ACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGT...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GATGTGCTGTACTGCTGGCTGAGCAGTAGCAGCATTTGGCAGCTGTaGGGTCGGCCTCAGGACTGTGGTTACTTTAGAACTGGACATCAC +
Preference number: 5 (lower is better)
Translates to: DVLYCWLSSSSIWQL*GRPQDCGYFRTGHH
Trigger: GTGATGTCCAGTTCTAAAGTAACCACAGTCCTGAGGCCGACCTCACAGCTGCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000643581.2
CDS TCA 90 bp CTCCGCATAGAGCTTTCCACTCGAGGACTAGCAACATCAGGAGGCTaGGGAGGAATGAGGGTTTTCCGAACTGCCATTCCATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LRIELSTRGLATSGG*GGMRVFRTAIPSVA
Trigger: TGCCACAGATGGAATGGCAGTTCGGAAAACCCTCATTCCTCCTCAGCCTCCTGATGTTGCTAGTCCTCGAGTGGAAAGCTCTATGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GCGACTGGGATGTTTGAGGTGGTCACAGCAGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTAACAATGGTACTTGTGGGAGCTTGC +
Preference number: 5 (lower is better)
Translates to: ATGMFEVVTAVAWEE*EGTVMVTMVLVGAC
Trigger: GCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGGATGGCCCTGTaGTCCACTGATTGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNTGMAL*STDCCH
Trigger: GTGGCAACAATCAGTGGACAACAGGGCCATCCCAGT...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAGAGTGTGAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCCGAGACTGGATTGGTaGGTGAATGATGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LECEMWQLAWCRGTAVKGPRLDW*VNDVLY
Trigger: GTACAGCACATCATTCACCAACCAATCCAGTCTCGG...GCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTATGAAGCTGCTGTTTaGGCGTCCCTAATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLYEAAV*ASLMQG
Trigger: ACCCTGCATTAGGGACGCCAAAACAGCAGCTTCATA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGCAGGCTGAAGCCCTaGTGTGTTGATTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTCRLKP*CVDWGC
Trigger: GCAACCCCAATCAACACACAAGGGCTTCAGCCTGCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PASHPCHCFQLVDTDASGGLLIG*ATIVAP
Trigger: TGGAGCCACAATTGTGGCCAACCCTATTAGCAATCC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MGSSAFTRELRNTSFISMPWAGA*VLALWL
Trigger: CAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATCATCAGTGCTGTTaGTCTCCATCATGTCACCTT +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGHHQCC*SPSCHL
Trigger: AAGGTGACATGATGGAGACAAACAGCACTGATGATG...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKSLGGD*RFSAFT
Trigger: GGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp ACCACCTTGGCGACTGGGATGTTTGAGGTGGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACTGTCATGGTAACAATGGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: TTLATGMFEVVTAVA*EEWEGTVMVTMVLV
Trigger: CACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp GATACAGTCTCCATGGACACAGTGACCGGAGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTGGCACCATCTGTGGCAGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: DTVSMDTVTGVAIDT*ISDLGLAPSVAGFF
Trigger: GAAGAAACCTGCCACAGATGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGACTGGGATGGCCCTGTaGTCCACTGATTGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKTGMAL*STDCCH
Trigger: GTGGCAACAATCAGTGGACAACAGGGCCATCCCAGT...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCG +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFSMATG*GEARCP
Trigger: CGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGGAACAGACGGTCTGTaGTCACTTCGGGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSGTDGL*SLRVSM
Trigger: CATGGAAACCCGAAGTGACAACAGACCGTCTGTTCC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGAACAGACGGTCTGTaGTCACTTCGGGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTGTDGL*SLRVSM
Trigger: CATGGAAACCCGAAGTGACAACAGACCGTCTGTTCC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTGCTGGCTGGATCCCTaGAATATGTCGAGCATGCGA +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTCWLDP*NMSSMR
Trigger: TCGCATGCTCGACATATTCAAGGGATCCAGCCAGCA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGATGGAGACACAGTGTaGGTAGCCAGTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSDGDTV*VASGGT
Trigger: AGTTCCTCCACTGGCTACCAACACTGTGTCTCCATC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTACCAGCCAGCCATCCTaGTCATTGCTTCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTTSQPS*SLLPTG
Trigger: ACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGATGTGGCAGCTCGCTaGGTGCCGTGGCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKDVAAR*VPWHCC
Trigger: ACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGATGTGGCAGCTCGCTaGGTGCCGTGGCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFDVAAR*VPWHCC
Trigger: ACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGCAGCAGAACCACTGTTaGCAATCTGAGAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKQQNHC*QSEKGP
Trigger: AGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCTG...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTATGAAGCTGCTGTTTaGGCGTCCCTAATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTYEAAV*ASLMQG
Trigger: ACCCTGCATTAGGGACGCCAAAACAGCAGCTTCATA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTATGAAGCTGCTGTTTaGGCGTCCCTAATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSYEAAV*ASLMQG
Trigger: ACCCTGCATTAGGGACGCCAAAACAGCAGCTTCATA...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGGAACAGACGGTCTGTaGTCACTTCGGGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEGTDGL*SLRVSM
Trigger: CATGGAAACCCGAAGTGACAACAGACCGTCTGTTCC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGGAACAGACGGTCTGTaGTCACTTCGGGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKGTDGL*SLRVSM
Trigger: CATGGAAACCCGAAGTGACAACAGACCGTCTGTTCC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATGCTGGCTGGATCCCTaGAATATGTCGAGCATGCGA +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKECWLDP*NMSSMR
Trigger: TCGCATGCTCGACATATTCAAGGGATCCAGCCAGCA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTGLLIG*ATIVAP
Trigger: TGGAGCCACAATTGTGGCCAACCCTATTAGCAATCC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCGCAGCACTGAATGGATaGCTAATAGGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: PLDVMGSSAFTRELRNTSAALNG*LIGLAT
Trigger: TGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGC...GGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGGGTCTGCACCACGGTaGTTGCTGCTGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYGSAPR*LLLEQH
Trigger: GTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGCTTTCTTCTCCTCTTaGACCCGGACGTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: EKHQPAILVIASNWWTLMAFFSS*TRTSLY
Trigger: GTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGCTTTCTTCTCCTCTTaGACCCGGACGTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKAFFSS*TRTSLY
Trigger: GTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGACCAGCCAGCCATCCTaGTCATTGCTTCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKTSQPS*SLLPTG
Trigger: ACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGT...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGGAGCAACTTATGGTGTaGCCTGCTCTGAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: EKHQPAILVIASNWWTLMEQLMV*PALNLH
Trigger: GTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTC...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTACGTGGATTTCAGACTaGGGTTTGGCACCATCTGTG +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTTWISD*GLAPSV
Trigger: CACAGATGGTGCCAAACCCAAGTCTGAAATCCACGT...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS GCA 90 bp GTGCTGTTTGTCTCCATCATGTCACCTTCTTCTGTTGAGATCACATaGTGTTGCTTTCGAGGCTTTTTCCTTGGGGAGGCACCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VLFVSIMSPSSVEIT*CCFRGFFLGEAPGG
Trigger: ACCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCCGAGACTGGATTGGTaGGTGAATGATGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: EKHQPAILVIASNWWTLMPRLDW*VNDVLY
Trigger: GTACAGCACATCATTCACCAACCAATCCAGTCTCGG...CATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGTGCTGGGGCACCACCTaGGCGACTGGGATGTTTGAG +
Preference number: 5 (lower is better)
Translates to: MGSSAFTRELRNTSFISMCWGTT*ATGMFE
Trigger: CTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCA...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGCTGGGGCACCACCTaGGCGACTGGGATGTTTGAG +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYCWGTT*ATGMFE
Trigger: CTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKGLLIG*ATIVAP
Trigger: TGGAGCCACAATTGTGGCCAACCCTATTAGCAATCC...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFPWAGA*VLALWL
Trigger: CAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACGCATGGACAAGTTGTTaGCCAGCAATGCAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FTPLDVMGSSAFTRELRNAWTSC*PAMQEM
Trigger: CATCTCTTGCATTGCTGGCAAACAACTTGTCCATGC...GTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTVGMDK*FASNAR
Trigger: TCTTGCATTGCTGGCAAACAACTTGTCCATGCCTAC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTTGACAGTCCCGTTCTaGTTAAGCAGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTLTVPF*LSSFRT
Trigger: TGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAA...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGATGTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGAATTTGGACACTTTTTaGACAGTCCCGTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: EMWQLAWCRGTAVKGQHGNLDTF*TVPFLL
Trigger: TAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATT...CCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTCAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 5 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFIQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp GGTAGTGTGATTCTTGTTGTGACATCTCGTGACTGGGCAGGACGCTaGATACTGATTGCTGCAGATGGAGGATGCTGGATAGACAAGGTT +
Preference number: 5 (lower is better)
Translates to: GSVILVVTSRDWAGR*ILIAADGGCWIDKV
Trigger: AACCTTGTCTATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTCACGAGATGTCACAACAAGAATCACACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp TTTGTCTCCATCATGTCACCTTCTTCTGTTGAGATCACATGCTGTTaGTTTCGAGGCTTTTTCCTTGGGGAGGCACCAGGTGGTAGGTCA +
Preference number: 5 (lower is better)
Translates to: FVSIMSPSSVEITCC*FRGFFLGEAPGGRS
Trigger: TGACCTACCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp CATATCTCACACCTTCCTCATCAATATACTCCTTGGGAGGAGACTTaGGCTTCTCAGCCTTCACCAGAAGACTCTTGGCAGTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: HISHLPHQYTPWEET*ASQPSPEDSWQWTS
Trigger: AGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGAAGGTGTGAGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGACTGGGATGGCCCTGTaGTCCACTGATTGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKTGMAL*STDCCH
Trigger: GTGGCAACAATCAGTGGACAACAGGGCCATCCCAGT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CCAGCCAGCCATCCTTGTCATTGCTTCCAACTGGTGGACACTGATGCATCCGGAGCGGATGATAGACATTaGCACATTTGTAGTCATGAT +
Preference number: 5 (lower is better)
Translates to: PASHPCHCFQLVDTDASGADDRH*HICSHD
Trigger: ATCATGACTACAAATGTGCAAATGTCTATCATCCGC...TCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGCTGAAGGAATGGTGTaGGTTGCCAAAATAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEAEGMV*VAKIGA
Trigger: AGCACCTATTTTGGCAACCAACACCATTCCTTCAGC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTAGGCTGATCATTATTTaGATTGGATACAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFRLIII*IGYSLH
Trigger: ATGGAGACTGTATCCAATCAAAATAATGATCAGCCT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAAGCATGGACAAGTTGTTaGCCAGCAATGCAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEAWTSC*PAMQEM
Trigger: CATCTCTTGCATTGCTGGCAAACAACTTGTCCATGC...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATTCACCAGAAGACTCTaGGCAGTGGACTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEFTRRL*AVDFSS
Trigger: TGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: VWRCVVHTINSITPATEVSLGGD*RFSAFT
Trigger: GGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGA...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTAACAGGGGTGCACCCGAACGCAAGAAGGCAGCTCACTATGTCCAGTCAGCTCTCTGGCTTCACTGATTaGATCCATCACAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: LTGVHPNARRQLTMSSQLSGFTD*IHHKFT
Trigger: TGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGA...GAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GAGTCACTTATGACACAGATCAGGTTTAACAGGGGTGCACCCGAACGCAAGAAGTTGACAGTCCCGTTCTaGTTAAGCAGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: ESLMTQIRFNRGAPERKKLTVPF*LSSFRT
Trigger: TGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAA...CTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTGTGTCATAAGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAATTGACAGTCCCGTTCTaGTTAAGCAGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKELTVPF*LSSFRT
Trigger: TGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAA...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTGGCAGCTCGCTTGGTGCCGTGGCACTGCTGTAAAAGGCCAACATGGGCATTTAATTTGGACACTTTTTaGACAGTCCCGTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: VAARLVPWHCCKRPTWAFNLDTF*TVPFLL
Trigger: TAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATT...AAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 90 bp CTCATCATCAGTGCTGTTTGTCTCCATCATGTCACCTTCTTCTGTTaGGATCACATGCTGTTGCTTTCGAGGCTTTTTCCTTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LIISAVCLHHVTFFC*DHMLLLSRLFPWGG
Trigger: GCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 90 bp AATGGTGTTGGTTGCCAAAATAGGTGCTACTGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGATTGTTTTCTGAGCCATTGTATGAAG +
Preference number: 5 (lower is better)
Translates to: NGVGCQNRCYCGCSH*RASTEDCFLSHCMK
Trigger: CTTCATACAATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGCTGAAGGAATGGTGTaGGTTGCCAAAATAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SINRKAEKHQPAILVIASAEGMV*VAKIGA
Trigger: AGCACCTATTTTGGCAACCAACACCATTCCTTCAGC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCG +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFSMATG*GEARCP
Trigger: CGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGGGTCTGCACCACGGTaGTTGCTGCTGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQGSAPR*LLLEQH
Trigger: GTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: QITKNVLQNKDLRATYGVSSGVC*AVAMSP
Trigger: AGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGA...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGACGTGGATTTCAGACTaGGGTTTGGCACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: MGSSAFTRELRNTSFISMTWISD*GLAPAG
Trigger: GCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACGT...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACACGTGGATTTCAGACTaGGGTTTGGCACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYTWISD*GLAPAG
Trigger: GCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACGT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGATGGAGACACAGTGTaGGTAGCCAGTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFDGDTV*VASGGT
Trigger: AGTTCCTCCACTGGCTACCAACACTGTGTCTCCATC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: SINRKAEKHQPAILVIASVGMDK*FASNAR
Trigger: TCTTGCATTGCTGGCAAACAACTTGTCCATGCCTAC...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTCACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACATCATCAGTGCTGTTaGTCTCCATCATGTCACCTT +
Preference number: 5 (lower is better)
Translates to: FHALGCHGFLCFHTGTKEHHQCC*SPSCHL
Trigger: AAGGTGACATGATGGAGACAAACAGCACTGATGATG...TTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGTGGACTTTCCAGCCTaGAGCACGACAGGATACTCC +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYVDFPA*STTGYS
Trigger: GGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCAC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 90 bp CAGCCTTCACCAGAAGACTCTTGGCAGTGGACTTCTCATCATCAGTaGTGTTTGTCTCCATCATGTCACCTTCTTCTGTTGAGATCACAT +
Preference number: 5 (lower is better)
Translates to: QPSPEDSWQWTSHHQ*CLSPSCHLLLLRSH
Trigger: ATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGCAGCAGAACCACTGTTaGCAATCTGAGAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: MGSSAFTRELRNTSFISMQQNHC*QSEKGP
Trigger: AGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCTG...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGCCCTTGGATGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTGCGGATGATAGACATTaGCACATTTGTAGTCATGAT +
Preference number: 5 (lower is better)
Translates to: TPLDVMGSSAFTRELRNTADDRH*HICSHD
Trigger: ATCATGACTACAAATGTGCAAATGTCTATCATCCGC...AGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGGGGGCCCAGGAGCATaGCTGCGGATGATAGACATT +
Preference number: 5 (lower is better)
Translates to: FYFQCREITDGPSGYFQSGGPGA*LRMIDI
Trigger: AATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTGCTGGCTGGATCCCTaGAATATGTCGAGCATGCGA +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYCWLDP*NMSSMR
Trigger: TCGCATGCTCGACATATTCAAGGGATCCAGCCAGCA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGCAGCACTGAATGGATaGCTAATAGGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKAALNG*LIGLAT
Trigger: TGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGGGTCTGCACCACGGTaGTTGCTGCTGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLGSAPR*LLLEQH
Trigger: GTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACATTTCAGACTTGGGTTaGGCACCTGCAGGCCTAGGT +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYISDLG*APAGLG
Trigger: ACCTAGGCCTGCAGGTGCCAAACCCAAGTCTGAAAT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGATGGAGACACAGTGTaGGTAGCCAGTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYDGDTV*VASGGT
Trigger: AGTTCCTCCACTGGCTACCAACACTGTGTCTCCATC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCTCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: FYFQCREITDGPSGYFQSSLGGD*RFSAFT
Trigger: GGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGA...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTAGATCCTTTCACGCCCTaGGATGTCATGGGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VWRCVVHTINSITPATEVDPFTP*DVMGSS
Trigger: AGAGGAACCCATGACATCCAAGGGCGTGAAAGGATC...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACCAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAAGGGGGCCCAGGAGCATaGCTGCGGATGATAGACATT +
Preference number: 5 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQGGPGA*LRMIDI
Trigger: AATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCC...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGCTGAAGGAATGGTGTaGGTTGCCAAAATAGGTGCT +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKAEGMV*VAKIGA
Trigger: AGCACCTATTTTGGCAACCAACACCATTCCTTCAGC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTATGCTGGGGCACCACCTaGGCGACTGGGATGTTTGAG +
Preference number: 5 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLCWGTT*ATGMFE
Trigger: CTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCA...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYGLLIG*ATIVAP
Trigger: TGGAGCCACAATTGTGGCCAACCCTATTAGCAATCC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGGCATGGACAAGTTGTTaGCCAGCAATGCAAGAGATG +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKAWTSC*PAMQEM
Trigger: CATCTCTTGCATTGCTGGCAAACAACTTGTCCATGC...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFVGMDK*FASNAR
Trigger: TCTTGCATTGCTGGCAAACAACTTGTCCATGCCTAC...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGTGGACTTTCCAGCCTaGAGCACGACAGGATACTCC +
Preference number: 5 (lower is better)
Translates to: QITKNVLQNKDLRATYGVVDFPA*STTGYS
Trigger: GGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCAC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACATTTCAGACTTGGGTTaGGCACCATCTGTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYISDLG*APSVAG
Trigger: ACCTGCCACAGATGGTGCCAAACCCAAGTCTGAAAT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTACTGGGATGGCCCTGTaGTCCACTGATTGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFTGMAL*STDCCH
Trigger: GTGGCAACAATCAGTGGACAACAGGGCCATCCCAGT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTTGCAGGCTGAAGCCCTaGTGTGTTGATTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFCRLKP*CVDWGC
Trigger: GCAACCCCAATCAACACACAAGGGCTTCAGCCTGCA...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTACGTGGATTTCAGACTaGGGTTTGGCACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFTWISD*GLAPAG
Trigger: GCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACGT...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCAATGGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: MGSSAFTRELRNTSFISMVGMDK*FASNAR
Trigger: TCTTGCATTGCTGGCAAACAACTTGTCCATGCCTAC...CATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACTTCACCAGAAGACTCTaGGCAGTGGACTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYFTRRL*AVDFSS
Trigger: TGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAA...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTATTCACCAGAAGACTCTaGGCAGTGGACTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: VWRCVVHTINSITPATEVFTRRL*AVDFSS
Trigger: TGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAA...TACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGTGGACTTTCCAGCCTaGAGCACGACAGGATACTCC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFVDFPA*STTGYS
Trigger: GGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCAC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTATAAACCGGAAGGCTGAAAAACACCAGCCAGCCATCCTTGTCATTGCTTCCTCTGGCTTCACTGATTaGATCCATCACAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: SINRKAEKHQPAILVIASSGFTD*IHHKFT
Trigger: TGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGA...GGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTTCAGCCTTCCGGTTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCCAGCCATCCTTGTCATaGCTTCCAACTGGTGGACAC +
Preference number: 5 (lower is better)
Translates to: FYFQCREITDGPSGYFQSQPSLS*LPTGGH
Trigger: GTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTG...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGAGCAACTTATGGTGTaGCCTGCTCTGAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: QITKNVLQNKDLRATYGVEQLMV*PALNLH
Trigger: GTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACCAGCAGAACCACTGTTaGCAATCTGAGAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: NLFESFINVWRCVVHTINQQNHC*QSEKGP
Trigger: AGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCTG...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCAGTCCGCAGCACTGAATGGATaGCTAATAGGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: FYFQCREITDGPSGYFQSAALNG*LIGLAT
Trigger: TGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGC...GGACTGAAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGCTTTCTTCTCCTCTTaGACCCGGACGTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFAFFSS*TRTSLY
Trigger: GTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAGTGGACTTTCCAGCCTaGAGCACGACAGGATACTCC +
Preference number: 5 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLVDFPA*STTGYS
Trigger: GGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCAC...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp GCATTTGAAGGTCAGGCAGAAGAACCGAATGGGGTGGGTGGAAGAGGTTTTATTAATTTGGACACTTTTTaGACAGTCCCGTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: AFEGQAEEPNGVGGRGFINLDTF*TVPFLL
Trigger: TAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATT...AATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGCCTGACCTTCAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGAGCAACTTATGGTGTaGCCTGCTCTGAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFEQLMV*PALNLH
Trigger: GTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTGCAGCACTGAATGGATaGCTAATAGGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFAALNG*LIGLAT
Trigger: TGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGC...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCATGGACAAGTTGTTaGCCAGCAATGCAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QITKNVLQNKDLRATYGVAWTSC*PAMQEM
Trigger: CATCTCTTGCATTGCTGGCAAACAACTTGTCCATGC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TGTCATGGGTTCCTCTGCTTTCACACGGGAACTAAGGAACACTTCCTTTATTTCTCTGGCTTCACTGATTaGATCCATCACAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: CHGFLCFHTGTKEHFLYFSGFTD*IHHKFT
Trigger: TGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGA...GAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACGCGGATGATAGACATTaGCACATTTGTAGTCATGAT +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYADDRH*HICSHD
Trigger: ATCATGACTACAAATGTGCAAATGTCTATCATCCGC...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTACCGAGACTGGATTGGTaGGTGAATGATGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KTSLSPLLTSGDVWYIQLPRLDW*VNDVLY
Trigger: GTACAGCACATCATTCACCAACCAATCCAGTCTCGG...TAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACGTCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGAATTTGGACACTTTTTaGACAGTCCCGTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: TSGDVWYIQLTASHQLQKNLDTF*TVPFLL
Trigger: TAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATT...CTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp TCTGGAGATGTGTGGTACATACAATTAACAGCATCACACCAGCTACAGAAGTACAGGCTGATCATTATTTaGATTGGATACAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SGDVWYIQLTASHQLQKYRLIII*IGYSLH
Trigger: ATGGAGACTGTATCCAATCAAAATAATGATCAGCCT...GTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AAGAGGTTTTATTTTCAGTGTAGAGAGATAACAGATGGTCCGAGTGGATACTTTCATCATCAGTGCTGTTaGTCTCCATCATGTCACCTT +
Preference number: 5 (lower is better)
Translates to: KRFYFQCREITDGPSGYFHHQCC*SPSCHL
Trigger: AAGGTGACATGATGGAGACAAACAGCACTGATGATG...AAAGTATCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp CAGATAACCAAGAATGTACTTCAGAACAAGGATCTGAGAGCAACTTATGGTGTTGCGGATGATAGACATTaGCACATTTGTAGTCATGAT +
Preference number: 5 (lower is better)
Translates to: QITKNVLQNKDLRATYGVADDRH*HICSHD
Trigger: ATCATGACTACAAATGTGCAAATGTCTATCATCCGC...AACACCATAAGTTGCTCTCAGATCCTTGTTCTGAAGTACATTCTTGGTTATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp ACAAAAACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATCTGGCTTCACTGATTaGATCCATCACAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: TKTSLSPLLTSGDVWYIQSGFTD*IHHKFT
Trigger: TGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGA...TTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS-3UTR CAA 90 bp AACCTCTTTGAGTCCTTTATTAACGTCTGGAGATGTGTGGTACATACAATTAACAGGCTGATCATTATTTaGATTGGATACAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: NLFESFINVWRCVVHTINRLIII*IGYSLH
Trigger: ATGGAGACTGTATCCAATCAAAATAATGATCAGCCT...GTTAATTGTATGTACCACACATCTCCAGACGTTAATAAAGGACTCAAAGAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GCCGCCTTGAGCTCGCTCCCGCGCGCTCTCCGTCTGTaGGGCCGACGTCCCCAGGCTCCGGACCCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: AALSSLPRALRL*GRRPQAPDPQP
Trigger: TGGCTGCGGGTCCGGAGCCTGGGGACGTCGGCCCCACAGACGGAGAGCGCGCGGGAGCGAGCTCAAGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000450957.1
ENST00000643581.2
CDS CAA 72 bp ATGCTTGGCCGTGGCGATGAGCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTGTGGGTCTGCACCACG +
Preference number: 6 (lower is better)
Translates to: MLGRGDEPWAGA*VLALWLWVCTT
Trigger: CGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GCAGGCTGTATCCCTGGGGTCCCAATGGGGGCCGGCTaGATACCCTGGGTACTGATGGGTGCTGGCTGGATC +
Preference number: 6 (lower is better)
Translates to: AGCIPGVPMGAG*IPWVLMGAGWI
Trigger: GATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp CCCTGGGCGGGAGCGTTGGTGCTAGCACTCTGGCTGTaGGTCTGCACCACGGTTGTTGCTGCTGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PWAGALVLALWL*VCTTVVAAGAA
Trigger: TGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp GGCAGGTTTCTTCCGGAGTATGCTTGGCCGTGGCGATaGGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTG +
Preference number: 6 (lower is better)
Translates to: GRFLPEYAWPWR*ALGGSVGASTL
Trigger: CAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp AGCCCGGTAGAAGGGGCTCCTAACCGAGGAAACTGTTaGGAACTCATTTCCACCCCCGCCACCCGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SPVEGAPNRGNC*ELISTPATRPP
Trigger: CGGCGGCCGGGTGGCGGGGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424298.5
CDS CCA 72 bp GATGAGCCCTGGGCGGGAGCGTTGGTGCTAGCACTCTaGCTGTGGGTCTGCACCACGGTTGTTGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: DEPWAGALVLAL*LWVCTTVVAAG
Trigger: TCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp TGGCACCATCTGTGGCAGGTTTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCTGGGCGGGAGCGTTGG +
Preference number: 6 (lower is better)
Translates to: WHHLWQVSSGVC*AVAMSPGRERW
Trigger: CCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS CAA 90 bp TTCCGGAGTATGCTTGGCCGTGGCGATGAGCCCTGGGCGGGAGCGTaGGTGCTAGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: FRSMLGRGDEPWAGA*VLALWLWVCTTVVA
Trigger: AGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp CTGCCATTCCATCTGTGGCAGGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGCCCTGGGCGGGAGCGT +
Preference number: 6 (lower is better)
Translates to: LPFHLWQVSSGV*LAVAMSPGRER
Trigger: ACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGAATGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp GTTTGGCACCATCTGTGGCAGGTTTCTTCCGGAGTATaGTTGGCCGTGGCGATGAGCCCTGGGCGGGAGCGT +
Preference number: 6 (lower is better)
Translates to: VWHHLWQVSSGV*LAVAMSPGRER
Trigger: ACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGTGCCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS CCA 72 bp AATTCCCTGTGTGCCAAGTGGTGCAGGCTGTATCCCTaGGGTCCCAATGGGGGCCGGCTGGATACCCTGGGT +
Preference number: 6 (lower is better)
Translates to: NSLCAKWCRLYP*GPNGGRLDTLG
Trigger: ACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp CCATTCCATCTGTGGCAGGTTTCTTCCGGAGTATGCTaGGCCGTGGCGATGAGCCCTGGGCGGGAGCGTTGG +
Preference number: 6 (lower is better)
Translates to: PFHLWQVSSGVC*AVAMSPGRERW
Trigger: CCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGATGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp CAGGGTAGTCTGGCTGGATCCGAGGAGAAGTGTGCGTaGTCTGCTGGGGCACCACCTTGGCGACTGGGATGT +
Preference number: 6 (lower is better)
Translates to: QGSLAGSEEKCA*SAGAPPWRLGC
Trigger: ACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp GGGTCCCAATGGGGGCCGGCTGGATACCCTGGGTACTaGTGGGTGCTGGCTGGATCCCTTGAATATGTCGAG +
Preference number: 6 (lower is better)
Translates to: GSQWGPAGYPGY*WVLAGSLEYVE
Trigger: CTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp AGCCCGGTAGAAGGGGCTCCTAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGTAGCCGCCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: SPVEGAPNRGNC*ELISTCSRRPP
Trigger: CGGCGGGCGGCGGCTACAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259235.7
ENST00000357702.9
CDS CCA 72 bp GGGGGCCGGCTGGATACCCTGGGTACTGATGGGTGCTaGCTGGATCCCTTGAATATGTCGAGCATGCGATGC +
Preference number: 6 (lower is better)
Translates to: GGRLDTLGTDGC*LDPLNMSSMRC
Trigger: GCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp CTGCACCTGTGGATAGGGCCTTACCACAACAGGCTCTaGCTTCTCCTCCCGGGACTGGAGGGAGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: LHLWIGPYHNRL*LLLPGLEGAAG
Trigger: TCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGTAAGGCCCTATCCACAGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS CCA 72 bp TCTGGCTGGATCCGAGGAGAAGTGTGCGTGATCTGCTaGGGCACCACCTTGGCGACTGGGATGTTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: SGWIRGEVCVIC*GTTLATGMFEV
Trigger: CACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp CGGGAACAGACGGTCTGTTGTCACTTCGGGTTTCCATaGCCACAGGATTGGGAGAGGCCCGATGTCCGGAGA +
Preference number: 6 (lower is better)
Translates to: REQTVCCHFGFP*PQDWERPDVRR
Trigger: TCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp CGACAACATCTGCACCTGTGGATAGGGCCTTACCACAACAGGCTCTaGCTTCTCCTCCCGGGACTGGAGGGAGCTGCTGGAACTCATGTG +
Preference number: 6 (lower is better)
Translates to: RQHLHLWIGPYHNRL*LLLPGLEGAAGTHV
Trigger: CACATGAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS CAA 90 bp GGAACAGACGGTCTGTTGTCACTTCGGGTTTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCGGAGATGGGAATCAGGCTACTCCTC +
Preference number: 6 (lower is better)
Translates to: GTDGLLSLRVSMATG*GEARCPEMGIRLLL
Trigger: GAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp AGCCCGGTAGAAGGGGCTCCTAACCGAGGAAACTGTTaGGAACTCATTTCCACCTGGGTGCTGCGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: SPVEGAPNRGNC*ELISTWVLRPV
Trigger: CACTGGGCGCAGCACCCAGGTGGAAATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000450957.1
ENST00000643581.2
CDS TCA 72 bp GATCTGCTGGGGCACCACCTTGGCGACTGGGATGTTTaGGGTGGTCACAGCAGTAGCATGGGAGGAATGGGA +
Preference number: 6 (lower is better)
Translates to: DLLGHHLGDWDV*GGHSSSMGGMG
Trigger: TCCCATTCCTCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp AATGGGGGCCGGCTGGATACCCTGGGTACTGATGGGTaGTGGCTGGATCCCTTGAATATGTCGAGCATGCGA +
Preference number: 6 (lower is better)
Translates to: NGGRLDTLGTDG*WLDPLNMSSMR
Trigger: TCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GATGGGAATCAGGCTACTCCTCTCGGCAGGGTAGTCTaGCTGGATCCGAGGAGAAGTGTGCGTGATCTGCTG +
Preference number: 6 (lower is better)
Translates to: DGNQATPLGRVV*LDPRRSVRDLL
Trigger: CAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GTCTGTTGTCACTTCGGGTTTCCATGGCCACAGGATTaGGAGAGGCCCGATGTCCGGAGATGGGAATCAGGC +
Preference number: 6 (lower is better)
Translates to: VCCHFGFPWPQD*ERPDVRRWESG
Trigger: GCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTGACAACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp GGTCTGTTGTCACTTCGGGTTTCCATGGCCACAGGATaGGGAGAGGCCCGATGTCCGGAGATGGGAATCAGG +
Preference number: 6 (lower is better)
Translates to: GLLSLRVSMATG*GEARCPEMGIR
Trigger: CCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp GTAGCATGCGCCGCTGTCGTAGTGATGACTGGAGACTaGGCTCTGGTGGCTGAGACAGTTGCTACCACAGCA +
Preference number: 6 (lower is better)
Translates to: VACAAVVVMTGD*ALVAETVATTA
Trigger: TGCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAGTCATCACTACGACAGCGGCGCATGCTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp TGCGTGTGTGACACAGATCCAGCTGTGGTCGCTGAAGGAATGGTGTaGGTTGCCAAAATAGGTGCTACTGTGGCTGCAGCCACTGGCGTG +
Preference number: 6 (lower is better)
Translates to: CVCDTDPAVVAEGMV*VAKIGATVAAATGV
Trigger: CACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTCACACACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp GGCCGGCTGGATACCCTGGGTACTGATGGGTGCTGGCTGGATCCCTaGAATATGTCGAGCATGCGATGCATCCACTGTCATCAACTGCAT +
Preference number: 6 (lower is better)
Translates to: GRLDTLGTDGCWLDP*NMSSMRCIHCHQLH
Trigger: ATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp TGCAGGCTGAAGCCCTTGTGTGTTGATTGGGGTTGCTaGGTGAATTCCCTGTGTGCCAAGTGGTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CRLKPLCVDWGC*VNSLCAKWCRL
Trigger: CAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAACACACAAGGGCTTCAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp CTTTCCTTCAGGCTGAGGCTGCTGAGTACCCATAGGTaGAGGCTGAAGCCCTTGTGTGTTGATTGGGGTTGC +
Preference number: 6 (lower is better)
Translates to: LSFRLRLLSTHR*RLKPLCVDWGC
Trigger: GCAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp GCTAGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTaGTGCTGGAGCAGCACTGAATGGATTGCTAATAGG +
Preference number: 6 (lower is better)
Translates to: ASTLAVGLHHGC*CWSSTEWIANR
Trigger: CCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp TCCATGGACACAGTGACCGGAGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTGGCACCTGCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: SMDTVTGVAIDT*ISDLGLAPAGL
Trigger: TAGGCCTGCAGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp GTGACCGGAGTGGCCATAGACACGTGGATTTCAGACTaGGGTTTGGCACCATCTGTGGCAGGTTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: VTGVAIDTWISD*GLAPSVAGFFR
Trigger: CCGGAAGAAACCTGCCACAGATGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS GCA 72 bp AGCAGCTGGGTTTATCAATCCAGCAGAACCACTGTTTaGAATCTGAGAAGGGGCCTGGCTCAGCCCGGTAGA +
Preference number: 6 (lower is better)
Translates to: SSWVYQSSRTTV*NLRRGLAQPGR
Trigger: TCTACCGGGCTGAGCCAGGCCCCTTCTCAGATTGCAAACAGTGGTTCTGCTGGATTGATAAACCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS GCA 72 bp AGCACTCTGGCTGTGGGTCTGCACCACGGTTGTTGCTaGTGGAGCAGCACTGAATGGATTGCTAATAGGGTT +
Preference number: 6 (lower is better)
Translates to: STLAVGLHHGCC*WSSTEWIANRV
Trigger: AACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp TGGATACTGTCGGATAGTGGACACGGAACTGGTGATTaGGGTGTAGGTATGTGCCGCCAGTGGGTATGCAGA +
Preference number: 6 (lower is better)
Translates to: WILSDSGHGTGD*GVGMCRQWVCR
Trigger: TCTGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp TCCATGGACACAGTGACCGGAGTGGCCATAGACACGTaGATTTCAGACTTGGGTTTGGCACCATCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: SMDTVTGVAIDT*ISDLGLAPSVA
Trigger: TGCCACAGATGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259235.7
CDS CAA 72 bp GACACAGATCCAGCTGTGGTCGCTGAAGGAATGGTGTaGGTTGCCAAAATAGGTGCTACTGTGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: DTDPAVVAEGMV*VAKIGATVAAA
Trigger: GGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp CTTGGGGAGGCACCAGGTGGTAGGTCACTTGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGAGATGGAGACACAGTGTTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: LGEAPGGRSLVGMDK*FASNARDGDTVLVA
Trigger: GGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp ATACCCTGGGTACTGATGGGTGCTGGCTGGATCCCTTaGATATGTCGAGCATGCGATGCATCCACTGTCATC +
Preference number: 6 (lower is better)
Translates to: IPWVLMGAGWIP*ICRACDASTVI
Trigger: GATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp GAGCTTTCCACTCGAGGACTAGCAACATCAGGAGGCTaGGGAGGAATGAGGGTTTTCCGAACTGCCATTCCA +
Preference number: 6 (lower is better)
Translates to: ELSTRGLATSGG*GGMRVFRTAIP
Trigger: TGGAATGGCAGTTCGGAAAACCCTCATTCCTCCTCAGCCTCCTGATGTTGCTAGTCCTCGAGTGGAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259234.10
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp ATATGTCGAGCATGCGATGCATCCACTGTCATCAACTaGATGGGGTTTAGGTGGACGGTAGACGCTACCCCA +
Preference number: 6 (lower is better)
Translates to: ICRACDASTVIN*MGFRWTVDATP
Trigger: TGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GCGACTGGGATGTTTGAGGTGGTCACAGCAGTAGCATaGGAGGAATGGGAGGGTACTGTCATGGTAACAATG +
Preference number: 6 (lower is better)
Translates to: ATGMFEVVTAVA*EEWEGTVMVTM
Trigger: CATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp GCTGCTGGAGCAGCACTGAATGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCATCTGCCAACACCACT +
Preference number: 6 (lower is better)
Translates to: AAGAALNGLLIG*ATIVAPSANTT
Trigger: AGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp CTGCTGGGCAGTTGGAGGGACGGCAATGGTAGGCTGATCATTATTTaGATTGGATACAGTCTCCATGGACACAGTGACCGGAGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LLGSWRDGNGRLIII*IGYSLHGHSDRSGH
Trigger: ATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp ACGGTTGTTGCTGCTGGAGCAGCACTGAATGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCATCTGCCAACACCACTGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: TVVAAGAALNGLLIG*ATIVAPSANTTAEV
Trigger: GACTTCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp TCCTTGGGAGGAGACTTGCGCTTCTCAGCCTTCACCAGAAGACTCTaGGCAGTGGACTTCTCATCATCAGTGCTGTTTGTCTCCATCATG +
Preference number: 6 (lower is better)
Translates to: SLGGDLRFSAFTRRL*AVDFSSSVLFVSIM
Trigger: CATGATGGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp TGTCCACTGATTGTTGCCACAGGAATGGCTGAAGCTTaGGGGATGCTACTCTCCATGGTAACGGTAACCTGC +
Preference number: 6 (lower is better)
Translates to: CPLIVATGMAEA*GMLLSMVTVTC
Trigger: GCAGGTTACCGTTACCATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCAACAATCAGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000450957.1
ENST00000643581.2
CDS GCA 72 bp GGTACTGTCATGGTAACAATGGTACTTGTGGGAGCTTaGGTGTGTGACACAGATCCAGCTGTGGTCGCTGAA +
Preference number: 6 (lower is better)
Translates to: GTVMVTMVLVGA*VCDTDPAVVAE
Trigger: TTCAGCGACCACAGCTGGATCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp GGTTGCCAAAATAGGTGCTACTGTGGCTGCAGCCACTaGCGTGCCAGTACTGAAGATTGTTTTCTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: GCQNRCYCGCSH*RASTEDCFLSH
Trigger: ATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp AGGCATGGACAAGTTGTTTGCCAGCAATGCAAGAGATaGAGACACAGTGTTGGTAGCCAGTGGAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: RHGQVVCQQCKR*RHSVGSQWRNC
Trigger: GCAGTTCCTCCACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp ACCACGGTTGTTGCTGCTGGAGCAGCACTGAATGGATaGCTAATAGGGTTGGCCACAATTGTGGCTCCATCT +
Preference number: 6 (lower is better)
Translates to: TTVVAAGAALNG*LIGLATIVAPS
Trigger: AGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp GCACCAGGTGGTAGGTCACTTGTAGGCATGGACAAGTaGTTTGCCAGCAATGCAAGAGATGGAGACACAGTG +
Preference number: 6 (lower is better)
Translates to: APGGRSLVGMDK*FASNARDGDTV
Trigger: CACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp GGAGACTTGCGCTTCTCAGCCTTCACCAGAAGACTCTaGGCAGTGGACTTCTCATCATCAGTGCTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: GDLRFSAFTRRL*AVDFSSSVLFV
Trigger: GACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp ACGGTTGTTGCTGCTGGAGCAGCACTGAATGGATTGCTAATAGGGTaGGCCACAATTGTGGCTCCATCTGCCAACACCACTGAAGTCTTT +
Preference number: 6 (lower is better)
Translates to: TVVAAGAALNGLLIG*ATIVAPSANTTEVF
Trigger: AAAGACTTCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259234.10
CDS GCA 72 bp GTCACTTGTAGGCATGGACAAGTTGTTTGCCAGCAATaGAAGAGATGGAGACACAGTGTTGGTAGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: VTCRHGQVVCQQ*KRWRHSVGSQW
Trigger: CCACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp ACACCTTCCTCATCAATATACTCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACCAGAAGACTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: TPSSSIYSLGGD*RFSAFTRRLLA
Trigger: TGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGAAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp ACATATCTCACACCTTCCTCATCAATATACTCCTTGGGAGGAGACTaGCGCTTCTCAGCCTTCACCAGAAGACTCTTGGCAGTGGACTTC +
Preference number: 6 (lower is better)
Translates to: TYLTPSSSIYSLGGD*RFSAFTRRLLAVDF
Trigger: GAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGAAGGTGTGAGATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS TCA 72 bp ATTCTTGTTGTGACATCTCGTGACTGGGCAGGACGCTaGATACTGATTGCTGCAGATGGAGGATGCTGGATA +
Preference number: 6 (lower is better)
Translates to: ILVVTSRDWAGR*ILIAADGGCWI
Trigger: TATCCAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTCACGAGATGTCACAACAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS GCA 72 bp AATGGTGTTGGTTGCCAAAATAGGTGCTACTGTGGCTaGAGCCACTGGCGTGCCAGTACTGAAGATTGTTTT +
Preference number: 6 (lower is better)
Translates to: NGVGCQNRCYCG*SHWRASTEDCF
Trigger: AAAACAATCTTCAGTACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CCA 72 bp ATGTTTGAGGTGGTCACAGCAGTAGCATGGGAGGAATaGGAGGGTACTGTCATGGTAACAATGGTACTTGTG +
Preference number: 6 (lower is better)
Translates to: MFEVVTAVAWEE*EGTVMVTMVLV
Trigger: CACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCTCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 72 bp AGGGGGCCCAGGAGCATTGCTGCGGATGATAGACATTaGCACATTTGTAGTCATGATGTGATGCAGGTTACT +
Preference number: 6 (lower is better)
Translates to: RGPRSIAADDRH*HICSHDVMQVT
Trigger: AGTAACCTGCATCACATCATGACTACAAATGTGCAAATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000424298.5
ENST00000643581.2
CDS CAA 72 bp AGTTGGAGGGACGGCAATGGTAGGCTGATCATTATTTaGATTGGATACAGTCTCCATGGACACAGTGACCGG +
Preference number: 6 (lower is better)
Translates to: SWRDGNGRLIII*IGYSLHGHSDR
Trigger: CCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp TCTCATCATCAGTGCTGTTTGTCTCCATCATGTCACCTTCTTCTGTaGAGATCACATGCTGTTGCTTTCGAGGCTTTTTCCTTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: SHHQCCLSPSCHLLL*RSHAVAFEAFSLGR
Trigger: CCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2
CDS CAA 90 bp TCACCAGAAGACTCTTGGCAGTGGACTTCTCATCATCAGTGCTGTTaGTCTCCATCATGTCACCTTCTTCTGTTGAGATCACATGCTGTT +
Preference number: 6 (lower is better)
Translates to: SPEDSWQWTSHHQCC*SPSCHLLLLRSHAV
Trigger: AACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259234.10
ENST00000259235.7
ENST00000357702.9
ENST00000643581.2