RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000205413

Ensembl transcript IDs: ENST00000379958.3, ENST00000446617.1, ENST00000620985.4

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTTCTGTGGGCATGACCTTCAGAAGACTGGTTGGTCCTCTGTTTTaGAAGATCCTTGAGTGCCAAGCACATGATACATTGATGATCTGC +
Preference number: 1 (lower is better)
Translates to: TSVGMTFRRLVGPLF*KILECQAHDTLMIC
Trigger: GCAGATCATCAATGTATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAGGTCATGCCCACAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR TCA 90 bp CTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATGTCACGGGTaGTGTGTGCACTCCTATAGTACTTCCAGGCCCATAATGTCTGGT +
Preference number: 1 (lower is better)
Translates to: LIKFRFNYLARPCHG*CVHSYSTSRPIMSG
Trigger: ACCAGACATTATGGGCCTGGAAGTACTATAGGAGTGCACACATCACCCGTGACATGGTCTTGCCAAATAATTAAACCTGAATTTGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CCA 90 bp CAAAACATAGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTaGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTC +
Preference number: 1 (lower is better)
Translates to: QNIGCMLICQYIGIF*MRDSLVFSQESLLF
Trigger: GAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCTATGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR GCA 90 bp ACCTTCAGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTaGCAAGCACATGATACATTGATGATCTGCTTAGTAAGAATAAAT +
Preference number: 1 (lower is better)
Translates to: TFRRLVGPLFWKILE*QAHDTLMICLVRIN
Trigger: ATTTATTCTTACTAAGCAGATCATCAATGTATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR GCA 90 bp GTATCGCTGGTTGTTTTTGTTCAAAACATAGGTTGTATGTTAATCTaGCAGTACATTGGCATCTTCTGGATGAGGGACTCATTAGTCTTC +
Preference number: 1 (lower is better)
Translates to: VSLVVFVQNIGCMLI*QYIGIFWMRDSLVF
Trigger: GAAGACTAATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCTATGTTTTGAACAAAAACAACCAGCGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CCA 90 bp TGTTTTTGTTCAAAACATAGGTTGTATGTTAATCTGCCAGTACATTaGCATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTC +
Preference number: 1 (lower is better)
Translates to: CFCSKHRLYVNLPVH*HLLDEGLISLLTRV
Trigger: GACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCTATGTTTTGAACAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCTGCATGTACAGATCTaGAGAGCTAGAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHLHVQI*RARGCI
Trigger: GATACAGCCTCTAGCTCTTCAGATCTGTACATGCAG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATATCTTCTTCAATCCATaGCTGGTAAGTAGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RRLVGPLFWKILECQAHDIFFNP*LVSSGV
Trigger: AACCCCACTACTTACCAGGCATGGATTGAAGAAGAT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR TCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACTGCATGTACAGATCTaGAGAGCTAGAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGLHVQI*RARGCI
Trigger: GATACAGCCTCTAGCTCTTCAGATCTGTACATGCAG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CAA 90 bp GGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATACATaGATGATCTGCTTAGTAAGAATAAATGTTGCTCCTCAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: GPLFWKILECQAHDT*MICLVRINVAPQFE
Trigger: CTCAAACTGAGGAGCAACATTTATTCTTACTAAGCAGATCATCAATGTATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTGTTGCTCCTCAGTTTaGGAGGTTTTTGCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: RDSLVFSQESLLFISLWNCCSSV*EVFAVF
Trigger: AAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR GCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGATGGAAGATCCTTGAGTaGCAAGCACATGATACATTG +
Preference number: 2 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGWKILE*QAHDTL
Trigger: CAATGTATCATGTGCTTGGCACTCAAGGATCTTCCA...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTTGTTCATTAGCTTGTaGAATTTGAGTGTCTGTATG +
Preference number: 2 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILFISL*NLSVCM
Trigger: CATACAGACACTCAAATTCCACAAGCTAATGAACAA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACAGGCCCATAATGTCTaGTCTTCCTCTGTGATGTTA +
Preference number: 2 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPQAHNV*SSSVML
Trigger: TAACATCACAGAGGAAGACCAGACATTATGGGCCTG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGAGGAAATTAAATACTaGATGTACAGATCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: RDSLVFSQESLLFISLWNEEIKY*MYRSEE
Trigger: CTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACTTCAGAAGACTGGTTaGTCCTCTGTTTTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPLQKTG*SSVLED
Trigger: ATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGGGAAAATTACATTTTaGTTACGTATCGCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPGKITF*LRIAGC
Trigger: ACAACCAGCGATACGTAATCAAAATGTAATTTTCCC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR GCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGAGGAAATTAAATACTaGATGTACAGATCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPEEIKY*MYRSEE
Trigger: CTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CCA 72 bp GGCATGACCTTCAGAAGACTGGTTGGTCCTCTGTTTTaGAAGATCCTTGAGTGCCAAGCACATGATACATTG +
Preference number: 3 (lower is better)
Translates to: GMTFRRLVGPLF*KILECQAHDTL
Trigger: CAATGTATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAGGTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR TCA 72 bp TTCAGGTTTAATTATTTGGCAAGACCATGTCACGGGTaGTGTGTGCACTCCTATAGTACTTCCAGGCCCATA +
Preference number: 3 (lower is better)
Translates to: FRFNYLARPCHG*CVHSYSTSRPI
Trigger: TATGGGCCTGGAAGTACTATAGGAGTGCACACATCACCCGTGACATGGTCTTGCCAAATAATTAAACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CCA 72 bp GGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTaGATGAGGGACTCATTAGTCTTCTCACAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: GCMLICQYIGIF*MRDSLVFSQES
Trigger: GGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR GCA 72 bp AGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTaGCAAGCACATGATACATTGATGATCTGCTTAGTA +
Preference number: 3 (lower is better)
Translates to: RLVGPLFWKILE*QAHDTLMICLV
Trigger: TACTAAGCAGATCATCAATGTATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTATTCTCCAACCTACTTaGGTAAGGTCTGATGACTTC +
Preference number: 3 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIILQPT*VRSDDF
Trigger: GAAGTCATCAGACCTTACCAAAGTAGGTTGGAGAAT...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATATTCTCCAACCTACTTaGGTAAGGTCTGATGACTTC +
Preference number: 3 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHILQPT*VRSDDF
Trigger: GAAGTCATCAGACCTTACCAAAGTAGGTTGGAGAAT...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAATGTTGCTCCTCAGTTaGAGAGGTTTTTGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGMLLLS*RGFCCL
Trigger: AAGACAGCAAAAACCTCTCAAACTGAGGAGCAACAT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCAAGCACATGATACATaGATGATCTGCTTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIQAHDT*MICLVR
Trigger: TCTTACTAAGCAGATCATCAATGTATCATGTGCTTG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCTTTTGTTCATTAGCTaGTGGAATTTGAGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILLFIS*WNLSVC
Trigger: ACAGACACTCAAATTCCACAAGCTAATGAACAAAAG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CCA 72 bp TCAAAACATAGGTTGTATGTTAATCTGCCAGTACATTaGCATCTTCTGGATGAGGGACTCATTAGTCTTCTC +
Preference number: 3 (lower is better)
Translates to: SKHRLYVNLPVH*HLLDEGLISLL
Trigger: GAGAAGACTAATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCTATGTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACAAGCACATGATACATaGATGATCTGCTTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGQAHDT*MICLVR
Trigger: TCTTACTAAGCAGATCATCAATGTATCATGTGCTTG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATGTTTTGGAAGATCCTaGAGTGCCAAGCACATGATA +
Preference number: 3 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPCFGRS*SAKHMI
Trigger: TATCATGTGCTTGGCACTCAAGGATCTTCCAAAACA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATACTGAGATCAAATTCTaGGAGGAAGAATATCAGGCT +
Preference number: 3 (lower is better)
Translates to: VRINVAPQFERFLLSLRNTEIKF*EEEYQA
Trigger: AGCCTGATATTCTTCCTCCAAGAATTTGATCTCAGT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCACTGAGATCAAATTCTaGGAGGAAGAATATCAGGCT +
Preference number: 3 (lower is better)
Translates to: FPDILMSKCHLSRQSSSITEIKF*EEEYQA
Trigger: AGCCTGATATTCTTCCTCCAAGAATTTGATCTCAGT...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR TCA 72 bp TTTTTGTCCTGTGAATTTCCCCTTTCTGGATATTGCTaGTTGCATATTTGTGGTGGTGTTAGTAGGATTTTT +
Preference number: 3 (lower is better)
Translates to: FLSCEFPLSGYC*LHICGGVSRIF
Trigger: AAAAATCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATTCACAGGACAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CAA 72 bp ATCCAGCTTGCAGCCATTGTTAACTCAGGACTAATCTaGTTTCGGTTCTACTTCCCTTTCACCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: IQLAAIVNSGLI*FRFYFPFTTPT
Trigger: TGTGGGGGTGGTGAAAGGGAAGTAGAACCGAAACAAGATTAGTCCTGAGTTAACAATGGCTGCAAGCTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCATCGCGGTGTCTTGTaGGTAGGAGTGTGTGCATAT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHHRGVL*VGVCAY
Trigger: ATATGCACACACTCCTACTCACAAGACACCGCGATG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTGGCTCACTGAACTTTaGTCCAAGACCTGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDWLTEL*SKTCVV
Trigger: AACAACACAGGTCTTGGATCAAAGTTCAGTGAGCCA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCACCCACTGCAACCATaGGATCAAAATCCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIHPLQP*DQNPVV
Trigger: GACTACTGGATTTTGATCTCATGGTTGCAGTGGGTG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCACAGAAAGTCTCAATaGGGGGATCTCTTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIHRKSQ*GDLLGH
Trigger: ATGACCCAAGAGATCCCCTCATTGAGACTTTCTGTG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATCAATCAAAGAGTGAATaGTGCGTACTCCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDQSKSE*CVLHSS
Trigger: ACTACTGTGGAGTACGCATCATTCACTCTTTGATTG...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCTTGAAGTGGCTCACTaGACTTTGATCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILEVAH*TLIQDL
Trigger: CAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTGTTGCTCCTCAGTTTaGGAGGTTTTTGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDCCSSV*EVFAVF
Trigger: AAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAGACCATGTCACGGGTaGTGTGTGCACTCCTATAGT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNRPCHG*CVHSYS
Trigger: ACTATAGGAGTGCACACATCACCCGTGACATGGTCT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATCTCTTCTGTGGCTGTTaGTGTATTTGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDLFCGC*CICEGF
Trigger: AAAGCCTTCACAAATACAGCAACAGCCACAGAAGAG...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTCTTTGGGAGAGAGTTaGTGTATTACGGCAATACTG +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDSLGES*CITAIL
Trigger: CAGTATTGCCGTAATACAGCAACTCTCTCCCAAAGA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCACAGAAAGTCTCAATaGGGGGATCTCTTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNHRKSQ*GDLLGH
Trigger: ATGACCCAAGAGATCCCCTCATTGAGACTTTCTGTG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATATCATACCGCCTTTTTaGCTTCGGATACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDIIPPF*LRIQSF
Trigger: GAAAGATTGTATCCGAAGTCAAAAAGGCGGTATGAT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTGGCTCACTGAACTTTaGTCCAAGACCTGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHWLTEL*SKTCVV
Trigger: AACAACACAGGTCTTGGATCAAAGTTCAGTGAGCCA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCTGCATCTCTCTACTTaGAGTGGCTCACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHLHLST*SGSLNF
Trigger: AAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCTGCATGTACAGATCTaGAGAGCTAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLHVQI*RARGCI
Trigger: GATACAGCCTCTAGCTCTTCAGATCTGTACATGCAG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTGGGAGAAAAGTGTGCTaGATTCCATGTATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIGRKVC*IPCIQL
Trigger: AAGCTGGATACATGGAATTCAGCACACTTTTCTCCC...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAGTTCCCAGAGAATGTaGATAGCCAAGGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNSSQRM*IAKVVP
Trigger: GGGAACTACCTTGGCTATGCACATTCTCTGGGAACT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATGGTTGCTTTGTACGATaGATATGTTTATATTGCCCC +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDGCFVR*ICLYCP
Trigger: GGGGCAATATAAACATATGCATCGTACAAAGCAACC...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATAAGCTCTCTGTTCTTTaGGAGAGAGTTGCTGTATTA +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDKLSVL*ERVAVL
Trigger: TAATACAGCAACTCTCTCCCAAAGAACAGAGAGCTT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATACTGTGATAGTGAAATaGTGGTATCAGGCACATATG +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDTVIVK*WYQAHM
Trigger: CATATGTGCCTGATACCACCATTTCACTATCACAGT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATATAAGTCAGTCCTATTaGTTGCAAGACTTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDISQSY*LQDFSK
Trigger: CTTCGAGAAGTCTTGCAACCAATAGGACTGACTTAT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATAATCTGCCAGTACATTaGCATCTTCTGGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHNLPVH*HLLDEG
Trigger: TCCCTCATCCAGAAGATGCCAATGTACTGGCAGATT...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTTTGCTTGTTGGACTTaGTGGTCTTCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDFACWT*WSSKYL
Trigger: CAAGTATTTTGAAGACCATCAAGTCCAACAAGCAAA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTATACACTTGGAAAGTaGAGGTTTGCTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIYTLGK*RFATRL
Trigger: AAGCCGAGTAGCAAACCTTCACTTTCCAAGTGTATA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTCATTGCCCCATAGGTaGTTAAACTGGTTACCTGTT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHSLPHR*LNWLPV
Trigger: AACAGGTAACCAGTTTAATCACCTATGGGGCAATGA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCAATCAAAGAGTGAATaGTGCGTACTCCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHQSKSE*CVLHSS
Trigger: ACTACTGTGGAGTACGCATCATTCACTCTTTGATTG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTGCTGTTGAGATTCTTTaGATGCACTTGAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIAVEIL*MHLRHV
Trigger: AACATGCCTCAAGTGCATTCAAAGAATCTCAACAGC...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGACCATGTCACGGGTaGTGTGTGCACTCCTATAGT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIRPCHG*CVHSYS
Trigger: ACTATAGGAGTGCACACATCACCCGTGACATGGTCT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCAGGTTTTTGTCCTGTaGATTTCCCCTTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHQVFVL*ISPFWI
Trigger: TATCCAGAAAGGGGAAATTCACAGGACAAAAACCTG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGTTGCTTTGCCATTCTaGTACCCAGTAGTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNVALPF*YPVVLQ
Trigger: TTGCAAGACTACTGGGTATCAGAATGGCAAAGCAAC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620985.4
CDS-3UTR GCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCTACTAGGTTTCTCCTaGATCTCTCTACTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHLLGFS*ISLLEV
Trigger: CACTTCAAGTAGAGAGATGCAGGAGAAACCTAGTAG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATATCTTCTTCAATCCATaGCTGGTAAGTAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHIFFNP*LVSSGV
Trigger: AACCCCACTACTTACCAGGCATGGATTGAAGAAGAT...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCCAACAATTTTCCCATaGGGTTTGTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHPTIFP*GLSLTP
Trigger: TGGAGTCAAAGACAAACCCCATGGGAAAATTGTTGG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATCAAAAACTTCCCTCTTaGCATTATGTCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDQKLPS*HYVFMC
Trigger: ACACATGAAGACATAATGCCAAGAGGGAAGTTTTTG...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATGTGATAGTGAAATGGTaGTATCAGGCACATATGAAT +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDVIVKW*YQAHMN
Trigger: ATTCATATGTGCCTGATACCACCATTTCACTATCAC...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCTTCAGAAGACTGGTTaGTCCTCTGTTTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILQKTG*SSVLED
Trigger: ATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGTCTCACTTCCAGGGTaGTGTAGGAGATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIVSLPG*CRRSQK
Trigger: CTTTTGTGATCTCCTACATCACCCTGGAAGTGAGAC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCCCATCTTAGATGTCTaGATCGAATCTTCAATGGCT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNPILDV*IESSMA
Trigger: AGCCATTGAAGATTCGATTCAGACATCTAAGATGGG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACATGTATCGGATCAATaGGATTGCCTGGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGHVSDQ*DCLVLF
Trigger: AAACAGGACCAGGCAATCTCATTGATCCGATACATG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTATACACTTGGAAAGTaGAGGTTTGCTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNYTLGK*RFATRL
Trigger: AAGCCGAGTAGCAAACCTTCACTTTCCAAGTGTATA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTAGTTCCCACATTCGATaGCCTCTGTTTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLISSHIR*PLFLSE
Trigger: TTCTGATAAAAACAGAGGTCATCGAATGTGGGAACT...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCATCGCGGTGTCTTGTaGGTAGGAGTGTGTGCATAT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNHRGVL*VGVCAY
Trigger: ATATGCACACACTCCTACTCACAAGACACCGCGATG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATATCATACCGCCTTTTTaGCTTCGGATACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHIIPPF*LRIQSF
Trigger: GAAAGATTGTATCCGAAGTCAAAAAGGCGGTATGAT...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCTGAATCTCACTGCATaGAAAGGCAATCTAATTCTC +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILNLTA*KGNLIL
Trigger: GAGAATTAGATTGCCTTTTCATGCAGTGAGATTCAG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATCTTGGCTCTCGAATaGACTTCTTTGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNILALE*TSLLVG
Trigger: TCCAACAAGCAAAGAAGTGCATTCGAGAGCCAAGAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGAAGCTCTTTCTCTTTaGCAGGAACTTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNEALSL*QELGSK
Trigger: CTTTGATCCAAGTTCCTGGCAAAGAGAAAGAGCTTC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGATCCACCATGACACTTTaGCACCTCGATAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGSTMTL*HLDRSL
Trigger: AAGACTTCTATCGAGGTGGCAAAGTGTCATGGTGGA...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGTTCCCAGAGAATGTaGATAGCCAAGGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISSQRM*IAKVVP
Trigger: GGGAACTACCTTGGCTATGCACATTCTCTGGGAACT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATGTGAGTAGGAGTGTGTaGATATCTTGCAAAAATTTA +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDVSRSV*ISCKNL
Trigger: TAAATTTTTGCAAGATATGCACACACTCCTACTCAC...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCTACTAGGTTTCTCCTaGATCTCTCTACTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLLGFS*ISLLEV
Trigger: CACTTCAAGTAGAGAGATGCAGGAGAAACCTAGTAG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATGGTTGCTTTGTACGATaGATATGTTTATATTGCCCC +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHGCFVR*ICLYCP
Trigger: GGGGCAATATAAACATATGCATCGTACAAAGCAACC...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTCCAAGAAAGAAATATaGAATTGGTTGCTTTGTACG +
Preference number: 4 (lower is better)
Translates to: RRLVGPLFWKILECQAHDSKKEI*NWLLCT
Trigger: CGTACAAAGCAACCAATTGCATATTTCTTTCTTGGA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATCTTCTTCAATCCATaGCTGGTAAGTAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNIFFNP*LVSSGV
Trigger: AACCCCACTACTTACCAGGCATGGATTGAAGAAGAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTGGAAGATCCTTGAGTaGCAAGCACATGATACATTG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNWKILE*QAHDTL
Trigger: CAATGTATCATGTGCTTGGCACTCAAGGATCTTCCA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTTCTATTTGAATAGCTaGTCCATGTGTGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIFYLNS*SMCDAH
Trigger: ATGGGCATCACACATGGACCAGCTATTCAAATAGAA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTGTCAGGTCTATGGATaGTTGCCTTTCCTTTGTATA +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLICQVYG*LPFLCI
Trigger: TATACAAAGGAAAGGCAACCATCCATAGACCTGACA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCGAAGCAAAAGTTCTTaGACTTTTTCCTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNRSKSS*TFSSFH
Trigger: GTGGAAGGAGGAAAAAGTCCAAGAACTTTTGCTTCG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTACATTGGCATCTTCTaGATGAGGGACTCATTAGTC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNYIGIF*MRDSLV
Trigger: GACTAATGAGTCCCTCATCCAGAAGATGCCAATGTA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAAATCTGCCAGTACATTaGCATCTTCTGGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGNLPVH*HLLDEG
Trigger: TCCCTCATCCAGAAGATGCCAATGTACTGGCAGATT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACATGTATCGGATCAATaGGATTGCCTGGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIHVSDQ*DCLVLF
Trigger: AAACAGGACCAGGCAATCTCATTGATCCGATACATG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGATCATTGCCCCATAGGTaGTTAAACTGGTTACCTGTT +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGSLPHR*LNWLPV
Trigger: AACAGGTAACCAGTTTAATCACCTATGGGGCAATGA...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACTTGAAGTGGCTCACTaGACTTTGATCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPLEVAH*TLIQDL
Trigger: CAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATGGGAAAATTACATTTTaGTTACGTATCGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHGKITF*LRIAGC
Trigger: ACAACCAGCGATACGTAATCAAAATGTAATTTTCCC...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGATCGAATGCACTTCTTTaGTTGTTGGACTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGSNALL*LLDLMV
Trigger: GACCATCAAGTCCAACAAGCAAAGAAGTGCATTCGA...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTTGGCCTCTTCATTTTaGTTAATATTGTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILASSF*LILFLG
Trigger: ACCCAGGAACAATATTAAGCAAAATGAAGAGGCCAA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTTCTATTTGAATAGCTaGTCCATGTGTGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNFYLNS*SMCDAH
Trigger: ATGGGCATCACACATGGACCAGCTATTCAAATAGAA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACGGATTAGCCATATCTaGGTTCTCTTTACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGRISHI*VLFTLL
Trigger: CAAAAGGGTAAAGAGAACCCAGATATGGCTAATCCG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACACATGTCAGGTCTATaGATGGTTGCCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIHMSGL*MVAFPL
Trigger: CAAAGGAAAGGCAACCATCCATAGACCTGACATGTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGTTCCCCCACAGCCTaGATGATGATACAGATGAAT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISSPTA*MMIQMN
Trigger: ATTCATCTGTATCATCATCCAGGCTGTGGGGGAACT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAATCTGGAGGTAGGTTaGATACAGGAGAGAATAATG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNNLEVG*IQERIM
Trigger: CATTATTCTCTCCTGTATCCAACCTACCTCCAGATT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATAAGTCAGTCCTATTaGTTGCAAGACTTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNISQSY*LQDFSK
Trigger: CTTCGAGAAGTCTTGCAACCAATAGGACTGACTTAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGATACATTGGCATCTTCTaGATGAGGGACTCATTAGTC +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGYIGIF*MRDSLV
Trigger: GACTAATGAGTCCCTCATCCAGAAGATGCCAATGTA...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACAGGCCCATAATGTCTaGTCTTCCTCTGTGATGTTA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIQAHNV*SSSVML
Trigger: TAACATCACAGAGGAAGACCAGACATTATGGGCCTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
3UTR CAA 72 bp ATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTaGTTCATTAGCTTGTGGAATTTGAGTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: MRDSLVFSQESL*FISLWNLSVCM
Trigger: CATACAGACACTCAAATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGTTGCTTTGCCATTCTaGTACCAAACTGACTCTAGA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIVALPF*YQTDSR
Trigger: TCTAGAGTCAGTTTGGTATCAGAATGGCAAAGCAAC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAATAGTTCTTCTATTTaGATAGCTGGTCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNNSSSI*IAGPCV
Trigger: CACACATGGACCAGCTATTCAAATAGAAGAACTATT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTTAGCTATAGCTGTTTaGATAGAGTACTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLAIAV*IEYCRR
Trigger: TCTTCTGCAGTACTCTATTCAAACAGCTATAGCTAA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTCTGCAATCAAAGAGTaGATGATGCGTACTCCACAG +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSISAIKE*MMRTPQ
Trigger: CTGTGGAGTACGCATCATTCACTCTTTGATTGCAGA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTCTGCAATCAAAGAGTaGATGATGCGTACTCCACAG +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSAIKE*MMRTPQ
Trigger: CTGTGGAGTACGCATCATTCACTCTTTGATTGCAGA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAATTGTCAGGTTCTATaGTTTTTGCTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNNCQVL*FLLVLP
Trigger: GGGCAAAACAAGCAAAAATCATAGAACCTGACAATT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCTGCATCTCTCTACTTaGAGTGGCTCACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLHLST*SGSLNF
Trigger: AAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACTGAATCTCACTGCATaGAAAGGCAATCTAATTCTC +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGLNLTA*KGNLIL
Trigger: GAGAATTAGATTGCCTTTTCATGCAGTGAGATTCAG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGGGAGAAAAGTGTGCTaGATTCCATGTATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPGRKVC*IPCIQL
Trigger: AAGCTGGATACATGGAATTCAGCACACTTTTCTCCC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGCAGTTGTACTCATTaGAGACGGATTAGCCATATC +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISSCTH*RRISHI
Trigger: GATATGGCTAATCCGTCTGCAATGAGTACAACTGCT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATCGAATGCACTTCTTTaGTTGTTGGACTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISNALL*LLDLMV
Trigger: GACCATCAAGTCCAACAAGCAAAGAAGTGCATTCGA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTGTCAAGGTCTAACCTaGCATTGCAGAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSICQGLT*HCRKSS
Trigger: GCTGGATTTTCTGCAATGGCAGGTTAGACCTTGACA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATGTCAAGGTCTAACCTaGCATTGCAGAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPCQGLT*HCRKSS
Trigger: GCTGGATTTTCTGCAATGGCAGGTTAGACCTTGACA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACGCTTGGCAAATGAATaGATTTGGGTTGAACCGATG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPRLANE*IWVEPM
Trigger: CATCGGTTCAACCCAAATGCATTCATTTGCCAAGCG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTGAGGAAATTAAATACTaGATGTACAGATCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIEEIKY*MYRSEE
Trigger: CTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCTGGATATTGCTGATTaGATATTTGTGGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLDIAD*IFVVVL
Trigger: TAACACCACCACAAATATGCAATCAGCAATATCCAG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGAATCGAATCTTCAATaGCTGTTTTCCGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNESNLQ*LFSAIL
Trigger: AAGAATTGCGGAAAACAGCCATTGAAGATTCGATTC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCACATGTCAGGTCTATaGATGGTTGCCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIHMSGL*MVAFPL
Trigger: CAAAGGAAAGGCAACCATCCATAGACCTGACATGTG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTCGTCTCATTTGGTGTaGTTTTCTGTTCTACATATA +
Preference number: 4 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLISSHLV*FSVLHI
Trigger: TATATGTAGAACAGAAAACCACACCAAATGAGACGA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATAGTTCCCCCACAGCCTaGATGATGATACAGATGAAT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSSPTA*MMIQMN
Trigger: ATTCATCTGTATCATCATCCAGGCTGTGGGGGAACT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAAATCTGGAGGTAGGTTaGATACAGGAGAGAATAATG +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGNLEVG*IQERIM
Trigger: CATTATTCTCTCCTGTATCCAACCTACCTCCAGATT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCAAGTGGGCCTCCAATaGAAAATCCCAGGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIQVGLQ*KIPGKK
Trigger: CTTTTTACCTGGGATTTTCCATTGGAGGCCCACTTG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACAAGTGGGCCTCCAATaGAAAATCCCAGGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPQVGLQ*KIPGKK
Trigger: CTTTTTACCTGGGATTTTCCATTGGAGGCCCACTTG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTTGTTCATTAGCTTGTaGAATTTGAGTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHLFISL*NLSVCM
Trigger: CATACAGACACTCAAATTCCACAAGCTAATGAACAA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGGTATCAGGCACATATaGATTAAGAAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIGIRHI*IKKSQK
Trigger: TTTCTGGCTCTTCTTAATTCATATGTGCCTGATACC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTGTTGCTCCTCAGTTTaGGAGGTTTTTGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSICCSSV*EVFAVF
Trigger: AAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCAGGTTTTTGTCCTGTaGATTTCCCCTTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNQVFVL*ISPFWI
Trigger: TATCCAGAAAGGGGAAATTCACAGGACAAAAACCTG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATAGCAGTTGTACTCATTaGAGACGGATTAGCCATATC +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSSCTH*RRISHI
Trigger: GATATGGCTAATCCGTCTGCAATGAGTACAACTGCT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCTCTTCTGTGGCTGTTaGTGTATTTGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLFCGC*CICEGF
Trigger: AAAGCCTTCACAAATACAGCAACAGCCACAGAAGAG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTCTTTGGGAGAGAGTTaGTGTATTACGGCAATACTG +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSLGES*CITAIL
Trigger: CAGTATTGCCGTAATACAGCAACTCTCTCCCAAAGA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACACACATCTCCACTCTaGCACAAGGAATTAATATCT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIHTSPL*HKELIS
Trigger: AGATATTAATTCCTTGTGGCAGAGTGGAGATGTGTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTGGAAGATCCTTGAGTaGCAAGCACATGATACATTG +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIWKILE*QAHDTL
Trigger: CAATGTATCATGTGCTTGGCACTCAAGGATCTTCCA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTCTGGAAGGTTAAGTTaGTTTGCCATTCTGATACCC +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSISGRLS*FAILIP
Trigger: GGGTATCAGAATGGCAAAGCAACTTAACCTTCCAGA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620985.4
CDS-3UTR CCA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATCATCTGTATTTTCTaGAAGGTTAAGTTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RDSLVFSQESLLFISLWNIICIF*KVKLLC
Trigger: GCAAAGCAACTTAACCTTCCAGAAAATACAGATGAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACGGATTAGCCATATCTaGGTTCTCTTTACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPRISHI*VLFTLL
Trigger: CAAAAGGGTAAAGAGAACCCAGATATGGCTAATCCG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACCAACAATTTTCCCATaGGGTTTGTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPPTIFP*GLSLTP
Trigger: TGGAGTCAAAGACAAACCCCATGGGAAAATTGTTGG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAAGCTCTCTGTTCTTTaGGAGAGAGTTGCTGTATTA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIKLSVL*ERVAVL
Trigger: TAATACAGCAACTCTCTCCCAAAGAACAGAGAGCTT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGCAAATGAATGCATTTaGGTTGAACCGATGGATACT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIANECI*VEPMDT
Trigger: AGTATCCATCGGTTCAACCCAAATGCATTCATTTGC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACGAAGCAAAAGTTCTTaGACTTTTTCCTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPRSKSS*TFSSFH
Trigger: GTGGAAGGAGGAAAAAGTCCAAGAACTTTTGCTTCG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCTTCAGAAGACTGGTTaGTCCTCTGTTTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSILQKTG*SSVLED
Trigger: ATCTTCCAAAACAGAGGACCAACCAGTCTTCTGAAG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTCTCTACGTTCCTTTTaGGACACAGTTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSLRSF*DTVWSL
Trigger: TAAAGACCAAACTGTGTCTCAAAAGGAACGTAGAGA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATCTCTACGTTCCTTTTaGGACACAGTTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPSLRSF*DTVWSL
Trigger: TAAAGACCAAACTGTGTCTCAAAAGGAACGTAGAGA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGAATCTGCACAGTTTTaGATCATTGCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIESAQF*IIASSL
Trigger: AAGACTTGAAGCAATGATTCAAAACTGTGCAGATTC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATGGTATCAGGCACATATaGATTAAGAAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNGIRHI*IKKSQK
Trigger: TTTCTGGCTCTTCTTAATTCATATGTGCCTGATACC...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATAGTTCCCACATTCGATaGCCTCTGTTTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSSHIR*PLFLSE
Trigger: TTCTGATAAAAACAGAGGTCATCGAATGTGGGAACT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAATTGTCAGGTTCTATaGTTTTTGCTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSINCQVL*FLLVLP
Trigger: GGGCAAAACAAGCAAAAATCATAGAACCTGACAATT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATTGACCCAGTGTATCTaGGATATAAGAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPLTQCI*DIRIVR
Trigger: CCTGACAATTCTTATATCTCAGATACACTGGGTCAA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTGACCCAGTGTATCTaGGATATAAGAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLTQCI*DIRIVR
Trigger: CCTGACAATTCTTATATCTCAGATACACTGGGTCAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCTTTCTGGATATTGCTaGTTGCATATTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSILSGYC*LHICGG
Trigger: ACCACCACAAATATGCAATCAGCAATATCCAGAAAG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACTTTCTGGATATTGCTaGTTGCATATTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPLSGYC*LHICGG
Trigger: ACCACCACAAATATGCAATCAGCAATATCCAGAAAG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTCTGGAAGGTTAAGTTaGTTTGCCATTCTGATACCA +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSISGRLS*FAILIP
Trigger: TGGTATCAGAATGGCAAAGCAACTTAACCTTCCAGA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS-3UTR GCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACAATACAGCTTCAACTaGTTCATTTCCTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGQYSFN*FISFIF
Trigger: AAAGATGAAGGAAATGAAGCAGTTGAAGCTGTATTG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATTGGCCTCTTCATTTTaGTTAATATTGTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSILASSF*LILFLG
Trigger: ACCCAGGAACAATATTAAGCAAAATGAAGAGGCCAA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCACACATCTCCACTCTaGCACAAGGAATTAATATCT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIHTSPL*HKELIS
Trigger: AGATATTAATTCCTTGTGGCAGAGTGGAGATGTGTG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAGAGGAAATTAAATACTaGATGTACAGATCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGEEIKY*MYRSEE
Trigger: CTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAATCATCTGTATTTTCTaGAAGGTTAAGTTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGIICIF*KVKLLC
Trigger: GCAAAGCAACTTAACCTTCCAGAAAATACAGATGAT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAACTGTGATAGTGAAATaGTGGTATCAGGCACATATG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPTVIVK*WYQAHM
Trigger: CATATGTGCCTGATACCACCATTTCACTATCACAGT...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATTTGGGTTGAACCGATaGATACTTTCAAGCAATACA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIFGLNR*ILSSNT
Trigger: TGTATTGCTTGAAAGTATCCATCGGTTCAACCCAAA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATGCAAATGAATGCATTTaGGTTGAACCGATGGATACT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNANECI*VEPMDT
Trigger: AGTATCCATCGGTTCAACCCAAATGCATTCATTTGC...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATTTGCTTGTTGGACTTaGTGGTCTTCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPFACWT*WSSKYL
Trigger: CAAGTATTTTGAAGACCATCAAGTCCAACAAGCAAA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATGAATCTGCACAGTTTTaGATCATTGCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNESAQF*IIASSL
Trigger: AAGACTTGAAGCAATGATTCAAAACTGTGCAGATTC...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR TCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTAGCTATAGCTGTTTaGATAGAGTACTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLAIAV*IEYCRR
Trigger: TCTTCTGCAGTACTCTATTCAAACAGCTATAGCTAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCTGGATATTGCTGATTaGATATTTGTGGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLDIAD*IFVVVL
Trigger: TAACACCACCACAAATATGCAATCAGCAATATCCAG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATCGTCTCATTTGGTGTaGTTTTCTGTTCTACATATA +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISSHLV*FSVLHI
Trigger: TATATGTAGAACAGAAAACCACACCAAATGAGACGA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATCTTTGCCAGGAACTTaGATCAAAGGGTTTATATTT +
Preference number: 4 (lower is better)
Translates to: EEIKYCMYRSEELEAVSISLPGT*IKGFIF
Trigger: AAATATAAACCCTTTGATCCAAGTTCCTGGCAAAGA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCAAAAACTTCCCTCTTaGCATTATGTCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNQKLPS*HYVFMC
Trigger: ACACATGAAGACATAATGCCAAGAGGGAAGTTTTTG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCGTGATAGTGAAATGGTaGTATCAGGCACATATGAAT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIVIVKW*YQAHMN
Trigger: ATTCATATGTGCCTGATACCACCATTTCACTATCAC...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTTGGGTTGAACCGATaGATACTTTCAAGCAATACA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNFGLNR*ILSSNT
Trigger: TGTATTGCTTGAAAGTATCCATCGGTTCAACCCAAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATGTGAGTAGGAGTGTGTaGATATCTTGCAAAAATTTA +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNVSRSV*ISCKNL
Trigger: TAAATTTTTGCAAGATATGCACACACTCCTACTCAC...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR GCA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCAATACAGCTTCAACTaGTTCATTTCCTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIQYSFN*FISFIF
Trigger: AAAGATGAAGGAAATGAAGCAGTTGAAGCTGTATTG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCATCTTTGCCAGGAACTTaGATCAAAGGGTTTATATTT +
Preference number: 4 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPSLPGT*IKGFIF
Trigger: AAATATAAACCCTTTGATCCAAGTTCCTGGCAAAGA...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CCA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTGTTCATTAGCTTGTaGAATTTGAGTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLFISL*NLSVCM
Trigger: CATACAGACACTCAAATTCCACAAGCTAATGAACAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp ACCAAACTGACTCTAGAAGAAACCGAAGAAGTCTCACTTCCAGGGTaGTGTAGGAGATCACAAAAGGCCACCTATTCACCCACTGCAACC +
Preference number: 5 (lower is better)
Translates to: TKLTLEETEEVSLPG*CRRSQKATYSPTAT
Trigger: GGTTGCAGTGGGTGAATAGGTGGCCTTTTGTGATCTCCTACATCACCCTGGAAGTGAGACTTCTTCGGTTTCTTCTAGAGTCAGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATCAGGTCTATGGATGGTaGCCTTTCCTTTGTATAATC +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDQVYGW*PFLCII
Trigger: GATTATACAAAGGAAAGGCAACCATCCATAGACCTG...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATAATGCACTTCTTTGCTaGTTGGACTTGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDNALLC*LDLMVF
Trigger: GAAGACCATCAAGTCCAACAAGCAAAGAAGTGCATT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCCTGCATCTCTCTACTaGAAGTGGCTCACTGAACTT +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIPASLY*KWLTEL
Trigger: AAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTTCAGGTTTAATTATTaGGCAAGACCATGTCACGGG +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDFRFNY*ARPCHG
Trigger: CCCGTGACATGGTCTTGCCAAATAATTAAACCTGAA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATAACTCAGGACTAATCTaGTTTCGGTTCTACTTCCCT +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDNSGLI*FRFYFP
Trigger: AGGGAAGTAGAACCGAAACAAGATTAGTCCTGAGTT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATTTCTCTACGTTCCTTTaGAGACACAGTTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDFSTFL*RHSLVF
Trigger: AAAGACCAAACTGTGTCTCAAAAGGAACGTAGAGAA...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATATGAATGCATTTGGGTaGAACCGATGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDMNAFG*NRWILS
Trigger: TGAAAGTATCCATCGGTTCAACCCAAATGCATTCAT...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGAAGACTGGTTGGTCCTCTGTTTTGGAAGATCCTTGAGTGCCAAGCACATGATGATCCAAGACCTGTGTaGTTTTGTGATTCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: RRLVGPLFWKILECQAHDDPRPV*FCDSSK
Trigger: CTTAGAAGAATCACAAAACAACACAGGTCTTGGATC...ATCATGTGCTTGGCACTCAAGGATCTTCCAAAACAGAGGACCAACCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATAGTCAGTCCTATTGGTaGCAAGACTTCTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNSQSYW*QDFSKL
Trigger: CAGCTTCGAGAAGTCTTGCAACCAATAGGACTGACT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTTCTGGAAGGTTAAGTaGCTTTGCCATTCTGATACC +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHFWKVK*LCHSDT
Trigger: GGTATCAGAATGGCAAAGCAACTTAACCTTCCAGAA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTTAATGAGGGCTTCCTaGGTATCATTGGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILMRAS*VSLVTL
Trigger: CAAAGTCACCAATGATACCAAGGAAGCCCTCATTAA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTTCTTTGGGAGAGAGTaGCTGTATTACGGCAATACT +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHFFGRE*LYYGNT
Trigger: AGTATTGCCGTAATACAGCAACTCTCTCCCAAAGAA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTAATGAGCTGGAGAATTaGGATTGTGTAAAGCCCAAC +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLINELEN*DCVKPN
Trigger: GTTGGGCTTTACACAATCCAAATTCTCCAGCTCATT...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTACCTTTCTCCGAGTTTaGGCCTCTTCATTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLITFLRV*ASSFCL
Trigger: TAAGCAAAATGAAGAGGCCAAAACTCGGAGAAAGGT...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACCTGCATCTCTCTACTaGAAGTGGCTCACTGAACTT +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGPASLY*KWLTEL
Trigger: AAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAAGTCAGTCCTATTGGTaGCAAGACTTCTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGSQSYW*QDFSKL
Trigger: CAGCTTCGAGAAGTCTTGCAACCAATAGGACTGACT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTTCAGGTTTAATTATTaGGCAAGACCATGTCACGGG +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHFRFNY*ARPCHG
Trigger: CCCGTGACATGGTCTTGCCAAATAATTAAACCTGAA...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp AAGCTACTAGGTTTCTCCTGCATCTCTCTACTTGAAGTGGCTCACTaGACTTTGATCCAAGACCTGTGTTGTTTTGTGATTCTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: KLLGFSCISLLEVAH*TLIQDLCCFVILLR
Trigger: TCTTAGAAGAATCACAAAACAACACAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGGAGAAACCTAGTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp TTGTCTGCTTTTAAAGCTACTAGGTTTCTCCTGCATCTCTCTACTTaGAGTGGCTCACTGAACTTTGATCCAAGACCTGTGTTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSAFKATRFLLHLST*SGSLNFDPRPVLFC
Trigger: ACAAAACAACACAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGGAGAAACCTAGTAGCTTTAAAAGCAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS GCA 90 bp GTTTCACCTTCATGTTCATCGCGGTGTCTTGTGAGTAGGAGTGTGTaGATATCTTGCAAAAATTTACTTTTTCCCATACCAGTATCGAAG +
Preference number: 5 (lower is better)
Translates to: VSPSCSSRCLVSRSV*ISCKNLLFPIPVSK
Trigger: CTTCGATACTGGTATGGGAAAAAGTAAATTTTTGCAAGATATGCACACACTCCTACTCACAAGACACCGCGATGAACATGAAGGTGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTGCTCCATTCACGTCTaGTTCAGTCAAAATTTCCCT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNCSIHV*FSQNFP
Trigger: AGGGAAATTTTGACTGAACAAGACGTGAATGGAGCA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATGTATCATTGGTGACTTaGATGCCAACAATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHVSLVT*MPTIFP
Trigger: TGGGAAAATTGTTGGCATCAAAGTCACCAATGATAC...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGCACTTCTTTGCTTGTaGGACTTGATGGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNALLCL*DLMVFK
Trigger: TTTGAAGACCATCAAGTCCAACAAGCAAAGAAGTGC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCTCTTTGCCAGGAACTaGGATCAAAGGGTTTATATT +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHLFARN*DQRVYI
Trigger: AATATAAACCCTTTGATCCAAGTTCCTGGCAAAGAG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATGCCCAGTTTAGAGCATaGCCAAAGTCCTTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNAQFRA*PKSFFL
Trigger: TAAAAAGAAGGACTTTGGCAATGCTCTAAACTGGGC...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTGGGGAAAATTACATTTaGATTACGTATCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIGENYI*ITYRWL
Trigger: CAACCAGCGATACGTAATCAAAATGTAATTTTCCCC...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CATCTTCTGGATGAGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATCAGATAGAGTACTATTaGGCAGTAAAACTTCCACAA +
Preference number: 5 (lower is better)
Translates to: HLLDEGLISLLTRVPFVHQIEYY*AVKLPQ
Trigger: TTGTGGAAGTTTTACTGCCAAATAGTACTCTATCTG...ATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCTCATCCAGAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTTTAGCTATAGCTGTTaGAATAGAGTACTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIFSYSC*NRVLQK
Trigger: CTTCTGCAGTACTCTATTCAAACAGCTATAGCTAAA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATGAATGCATTTGGGTaGAACCGATGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNMNAFG*NRWILS
Trigger: TGAAAGTATCCATCGGTTCAACCCAAATGCATTCAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTCTCTCTATCTTCACTTaGCTGTTGAGATTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLILSIFT*LLRFFE
Trigger: TTCAAAGAATCTCAACAGCAAAGTGAAGATAGAGAG...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGTTGTATGTTAATCTGCCAGTACATTGGCATCTTCTGGATGAGGGACTCATTTATCATACCGCCTTTTaGACTTCGGATACAATCTTT +
Preference number: 5 (lower is better)
Translates to: RLYVNLPVHWHLLDEGLIYHTAF*TSDTIF
Trigger: AAAGATTGTATCCGAAGTCAAAAAGGCGGTATGATA...AATGAGTCCCTCATCCAGAAGATGCCAATGTACTGGCAGATTAACATACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAAATGAGCTGGAGAATTaGGATTGTGTAAAGCCCAAC +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGNELEN*DCVKPN
Trigger: GTTGGGCTTTACACAATCCAAATTCTCCAGCTCATT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAGATAAGTCAGTCCTATaGGTTGCAAGACTTCTCGAA +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGDKSVL*VARLLE
Trigger: TTCGAGAAGTCTTGCAACCAATAGGACTGACTTATC...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATACTGAGATCAAATTCTaGGAGGAAGAATATCAGGCT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNTEIKF*EEEYQA
Trigger: AGCCTGATATTCTTCCTCCAAGAATTTGATCTCAGT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAATTCTCCAACCTACTTaGGTAAGGTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGILQPT*VRSDDF
Trigger: GAAGTCATCAGACCTTACCAAAGTAGGTTGGAGAAT...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTCACAAGAGTCCCTTTaGTTCATTAGCTTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNSQESL*FISLWN
Trigger: ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp TGGTCTTTAGGAGCATTTTTACTGGGCTTTCCCATCTTAGATGTCTaGATCGAATCTTCAATGGCTGTTTTCCGCAATTCTTTGAATAGT +
Preference number: 5 (lower is better)
Translates to: WSLGAFLLGFPILDV*IESSMAVFRNSLNS
Trigger: ACTATTCAAAGAATTGCGGAAAACAGCCATTGAAGATTCGATTCAGACATCTAAGATGGGAAAGCCCAGTAAAAATGCTCCTAAAGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACTCGAATGCACTTCTTaGCTTGTTGGACTTGATGGT +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPLECTS*LVGLDG
Trigger: ACCATCAAGTCCAACAAGCAAAGAAGTGCATTCGAG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCTCGAATGCACTTCTTaGCTTGTTGGACTTGATGGT +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLECTS*LVGLDG
Trigger: ACCATCAAGTCCAACAAGCAAAGAAGTGCATTCGAG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACTCTTTGCCAGGAACTaGGATCAAAGGGTTTATATT +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGLFARN*DQRVYI
Trigger: AATATAAACCCTTTGATCCAAGTTCCTGGCAAAGAG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGAAGCTCTTTCTCTTaGCCAGGAACTTGGATCAAA +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIRSSFS*PGTWIK
Trigger: TTTGATCCAAGTTCCTGGCAAAGAGAAAGAGCTTCT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATTCTTTGGGAGAGAGTaGCTGTATTACGGCAATACT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIFFGRE*LYYGNT
Trigger: AGTATTGCCGTAATACAGCAACTCTCTCCCAAAGAA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACCCCAGAAAGCCTTCTaGTTTCCAATTCCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIPQKAF*FPIPKN
Trigger: ATTCTTAGGAATTGGAAACAAGAAGGCTTTCTGGGG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATATCTTCACTTTGCTGTaGAGATTCTTTGAATGCACT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNIFTLL*RFFECT
Trigger: AGTGCATTCAAAGAATCTCAACAGCAAAGTGAAGAT...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCTCTCTATCTTCACTTaGCTGTTGAGATTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLSIFT*LLRFFE
Trigger: TTCAAAGAATCTCAACAGCAAAGTGAAGATAGAGAG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTATCATACCGCCTTTTaGACTTCGGATACAATCTTT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNYHTAF*TSDTIF
Trigger: AAAGATTGTATCCGAAGTCAAAAAGGCGGTATGATA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATTCTTTTGACTGGATTTaGACAGTGCATTGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNSFDWI*TVHCSK
Trigger: CTTAGAACAATGCACTGTCAAAATCCAGTCAAAAGA...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAATGTTGCTCCTCAGTTaGAGAGGTTTTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIMLLLS*RGFCCL
Trigger: AAGACAGCAAAAACCTCTCAAACTGAGGAGCAACAT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AGGGACTCATTAGTCTTCTCACAAGAGTCCCTTTTGTTCATTAGCTTGTGGAATCTTTTGTTCATTAGCTaGTGGAATTTGAGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: RDSLVFSQESLLFISLWNLLFIS*WNLSVC
Trigger: ACAGACACTCAAATTCCACAAGCTAATGAACAAAAG...ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGAGAAGACTAATGAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAACTCAGGACTAATCTaGTTTCGGTTCTACTTCCCT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSINSGLI*FRFYFP
Trigger: AGGGAAGTAGAACCGAAACAAGATTAGTCCTGAGTT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTCTGGAAGGTTAAGTaGCTTTGCCATTCTGATACC +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNFWKVK*LCHSDT
Trigger: GGTATCAGAATGGCAAAGCAACTTAACCTTCCAGAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTGCTCCATTCACGTCTaGTTCAGTCAAAATTTCCCT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSICSIHV*FSQNFP
Trigger: AGGGAAATTTTGACTGAACAAGACGTGAATGGAGCA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACCTTTTGTTTTTGCTTaGAAGTTTCTCTACGTTCCT +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGPFVFA*KFLYVP
Trigger: AGGAACGTAGAGAAACTTCAAAGCAAAAACAAAAGG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCAGGTCTATGGATGGTaGCCTTTCCTTTGTATAATC +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIQVYGW*PFLCII
Trigger: GATTATACAAAGGAAAGGCAACCATCCATAGACCTG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGTATCATTGGTGACTTaGATGCCAACAATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIVSLVT*MPTIFP
Trigger: TGGGAAAATTGTTGGCATCAAAGTCACCAATGATAC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTTAATGAGGGCTTCCTaGGTATCATTGGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNLMRAS*VSLVTL
Trigger: CAAAGTCACCAATGATACCAAGGAAGCCCTCATTAA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGCACTTCTTTGCTTGTaGGACTTGATGGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPALLCL*DLMVFK
Trigger: TTTGAAGACCATCAAGTCCAACAAGCAAAGAAGTGC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAAATGCACTTCTTTGCTaGTTGGACTTGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPNALLC*LDLMVF
Trigger: GAAGACCATCAAGTCCAACAAGCAAAGAAGTGCATT...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCAGAAGCTCTTTCTCTTaGCCAGGAACTTGGATCAAA +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIRSSFS*PGTWIK
Trigger: TTTGATCCAAGTTCCTGGCAAAGAGAAAGAGCTTCT...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAAAGAGCTTTGCTTCCTaGGTGAAAATATTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPKSFAS*VKIFCP
Trigger: AGGGCAGAATATTTTCACCAAGGAAGCAAAGCTCTT...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCAAGAGCTTTGCTTCCTaGGTGAAAATATTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIKSFAS*VKIFCP
Trigger: AGGGCAGAATATTTTCACCAAGGAAGCAAAGCTCTT...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACCCCAGAAAGCCTTCTaGTTTCCAATTCCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPPQKAF*FPIPKN
Trigger: ATTCTTAGGAATTGGAAACAAGAAGGCTTTCTGGGG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCGCCCAGTTTAGAGCATaGCCAAAGTCCTTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIAQFRA*PKSFFL
Trigger: TAAAAAGAAGGACTTTGGCAATGCTCTAAACTGGGC...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAAGAGCCCAGAAAACTaGTCTGCTTTTAAAGCTACT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIKSPEN*SAFKAT
Trigger: AGTAGCTTTAAAAGCAGACAAGTTTTCTGGGCTCTT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACAGGAGAGAATAATGTaGGCCAAGATGAAATTTAGC +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIQERIM*AKMKFS
Trigger: GCTAAATTTCATCTTGGCCAACATTATTCTCTCCTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGATAAGTCAGTCCTATaGGTTGCAAGACTTCTCGAA +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPDKSVL*VARLLE
Trigger: TTCGAGAAGTCTTGCAACCAATAGGACTGACTTATC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGAGAAATATGCAATTGGTaGCTTTGTACGATGCATATG +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGEICNW*LCTMHM
Trigger: CATATGCATCGTACAAAGCAACCAATTGCATATTTC...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCATTCTCCAACCTACTTaGGTAAGGTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIILQPT*VRSDDF
Trigger: GAAGTCATCAGACCTTACCAAAGTAGGTTGGAGAAT...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp AATTTCCCCTTTCTGGATATTGCTGATTGCATATTTGTGGTGGTGTTAGTAGGACTTTTGTTCATTAGCTaGTGGAATTTGAGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: NFPFLDIADCIFVVVLVGLLFIS*WNLSVC
Trigger: ACAGACACTCAAATTCCACAAGCTAATGAACAAAAG...TCCTACTAACACCACCACAAATATGCAATCAGCAATATCCAGAAAGGGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp AATTTGACTTTTATTCAGGTGATAGCTTTTCTTCAATTCTTCCAGTaGGAACTCTGCAATCAAAGAGTGAATGATGCGTACTCCACAGTA +
Preference number: 5 (lower is better)
Translates to: NLTFIQVIAFLQFFQ*ELCNQRVNDAYSTV
Trigger: TACTGTGGAGTACGCATCATTCACTCTTTGATTGCAGAGTTCTCACTGGAAGAATTGAAGAAAAGCTATCACCTGAATAAAAGTCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTTCTCTACGTTCCTTTaGAGACACAGTTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIFSTFL*RHSLVF
Trigger: AAAGACCAAACTGTGTCTCAAAAGGAACGTAGAGAA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACAGATAGAGTACTATTaGGCAGTAAAACTTCCACAA +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIQIEYY*AVKLPQ
Trigger: TTGTGGAAGTTTTACTGCCAAATAGTACTCTATCTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAAGAATCTGCACAGTTTaGAATCATTGCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIRICTV*NHCFKS
Trigger: AGACTTGAAGCAATGATTCAAAACTGTGCAGATTCT...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGAAAAATCCACTGTCTaGTTTTTCAGCACAGCACAT +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPEKSTV*FFSTAH
Trigger: ATGTGCTGTGCTGAAAAACAAGACAGTGGATTTTTC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCGAAAAATCCACTGTCTaGTTTTTCAGCACAGCACAT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIEKSTV*FFSTAH
Trigger: ATGTGCTGTGCTGAAAAACAAGACAGTGGATTTTTC...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATATTTAGCTATAGCTGTTaGAATAGAGTACTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIFSYSC*NRVLQK
Trigger: CTTCTGCAGTACTCTATTCAAACAGCTATAGCTAAA...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGATCCAAGACCTGTGTaGTTTTGTGATTCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPDPRPV*FCDSSK
Trigger: CTTAGAAGAATCACAAAACAACACAGGTCTTGGATC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATAAGAGCCCAGAAAACTaGTCTGCTTTTAAAGCTACT +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNKSPEN*SAFKAT
Trigger: AGTAGCTTTAAAAGCAGACAAGTTTTCTGGGCTCTT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCACAGGAGAGAATAATGTaGGCCAAGATGAAATTTAGC +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPQERIM*AKMKFS
Trigger: GCTAAATTTCATCTTGGCCAACATTATTCTCTCCTG...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATAGAAAGAAATATGCAATaGGTTGCTTTGTACGATGCA +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIERNMQ*VALYDA
Trigger: TGCATCGTACAAAGCAACCAATTGCATATTTCTTTC...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GAGGAAATTAAATACTGCATGTACAGATCTGAAGAGCTAGAGGCTGTATCTATACAAGCACATGATACATaGATGATCTGCTTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: EEIKYCMYRSEELEAVSIQAHDT*MICLVR
Trigger: TCTTACTAAGCAGATCATCAATGTATCATGTGCTTG...TATAGATACAGCCTCTAGCTCTTCAGATCTGTACATGCAGTATTTAATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCTCACAAGAGTCCCTTTaGTTCATTAGCTTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSISQESL*FISLWN
Trigger: ATTCCACAAGCTAATGAACAAAAGGGACTCTTGTGA...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGGGGAAAATTACATTTaGATTACGTATCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPGENYI*ITYRWL
Trigger: CAACCAGCGATACGTAATCAAAATGTAATTTTCCCC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 90 bp ATCCAACTTGTAACGATATGGATTACTGAATTCATCAAATGGATATaGTACACATGTCAGGTCTATGGATGGTTGCCTTTCCTTTGTATA +
Preference number: 5 (lower is better)
Translates to: IQLVTIWITEFIKWI*YTCQVYGWLPFLCI
Trigger: TATACAAAGGAAAGGCAACCATCCATAGACCTGACATGTGTATCATATCCATTTGATGAATTCAGTAATCCATATCGTTACAAGTTGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCTTTTGAGACACAGTTaGGTCTTTAGGAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSILLRHS*VFRSIF
Trigger: AAAAATGCTCCTAAAGACCAAACTGTGTCTCAAAAG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCCCTTTTGTTTTTGCTTaGAAGTTTCTCTACGTTCCT +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIPFVFA*KFLYVP
Trigger: AGGAACGTAGAGAAACTTCAAAGCAAAAACAAAAGG...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAAGAATCTGCACAGTTTaGAATCATTGCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPRICTV*NHCFKS
Trigger: AGACTTGAAGCAATGATTCAAAACTGTGCAGATTCT...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATATCTTCACTTTGCTGTaGAGATTCTTTGAATGCACT +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNIFTLL*RFFECT
Trigger: AGTGCATTCAAAGAATCTCAACAGCAAAGTGAAGAT...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATTCTTTTGACTGGATTTaGACAGTGCATTGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNSFDWI*TVHCSK
Trigger: CTTAGAACAATGCACTGTCAAAATCCAGTCAAAAGA...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp CAAATAAGATCCAGAGACCTGATCAAATTCAGGTTTAATTATTTGGCAAGACCAGAAATATGCAATTGGTaGCTTTGTACGATGCATATG +
Preference number: 5 (lower is better)
Translates to: QIRSRDLIKFRFNYLARPEICNW*LCTMHM
Trigger: CATATGCATCGTACAAAGCAACCAATTGCATATTTC...TGGTCTTGCCAAATAATTAAACCTGAATTTGATCAGGTCTCTGGATCTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp TTCCCAGACATTCTAATGTCTAAATGCCATTTGAGTAGACAATCTTCTTCAATCGAAAGAAATATGCAATaGGTTGCTTTGTACGATGCA +
Preference number: 5 (lower is better)
Translates to: FPDILMSKCHLSRQSSSIERNMQ*VALYDA
Trigger: TGCATCGTACAAAGCAACCAATTGCATATTTCTTTC...GATTGAAGAAGATTGTCTACTCAAATGGCATTTAGACATTAGAATGTCTGGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS-3UTR CAA 90 bp GTAAGAATAAATGTTGCTCCTCAGTTTGAGAGGTTTTTGCTGTCTTTGAGAAATCAAGCACATGATACATaGATGATCTGCTTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: VRINVAPQFERFLLSLRNQAHDT*MICLVR
Trigger: TCTTACTAAGCAGATCATCAATGTATCATGTGCTTG...ATTTCTCAAAGACAGCAAAAACCTCTCAAACTGAGGAGCAACATTTATTCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 72 bp ACTCTAGAAGAAACCGAAGAAGTCTCACTTCCAGGGTaGTGTAGGAGATCACAAAAGGCCACCTATTCACCC +
Preference number: 6 (lower is better)
Translates to: TLEETEEVSLPG*CRRSQKATYSP
Trigger: GGGTGAATAGGTGGCCTTTTGTGATCTCCTACATCACCCTGGAAGTGAGACTTCTTCGGTTTCTTCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS TCA 72 bp GGTTTCTCCTGCATCTCTCTACTTGAAGTGGCTCACTaGACTTTGATCCAAGACCTGTGTTGTTTTGTGATT +
Preference number: 6 (lower is better)
Translates to: GFSCISLLEVAH*TLIQDLCCFVI
Trigger: AATCACAAAACAACACAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGGAGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS TCA 72 bp TTTAAAGCTACTAGGTTTCTCCTGCATCTCTCTACTTaGAGTGGCTCACTGAACTTTGATCCAAGACCTGTG +
Preference number: 6 (lower is better)
Translates to: FKATRFLLHLST*SGSLNFDPRPV
Trigger: CACAGGTCTTGGATCAAAGTTCAGTGAGCCACTTCAAGTAGAGAGATGCAGGAGAAACCTAGTAGCTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS CCA 72 bp GAGAATGTGCATAGCCAAGGTAGTTCCCCCACAGCCTaGATGATGATACAGATGAATAATTTTGGTACTTGT +
Preference number: 6 (lower is better)
Translates to: ENVHSQGSSPTA*MMIQMNNFGTC
Trigger: ACAAGTACCAAAATTATTCATCTGTATCATCATCCAGGCTGTGGGGGAACTACCTTGGCTATGCACATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS TCA 72 bp GGAGCATTTTTACTGGGCTTTCCCATCTTAGATGTCTaGATCGAATCTTCAATGGCTGTTTTCCGCAATTCT +
Preference number: 6 (lower is better)
Translates to: GAFLLGFPILDV*IESSMAVFRNS
Trigger: AGAATTGCGGAAAACAGCCATTGAAGATTCGATTCAGACATCTAAGATGGGAAAGCCCAGTAAAAATGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS GCA 72 bp TCTTGGACTTTTTCCTCCTTCCACACATCTCCACTCTaGCACAAGGAATTAATATCTGGTGTCTTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: SWTFSSFHTSPL*HKELISGVFLK
Trigger: CTTTAAGAAGACACCAGATATTAATTCCTTGTGGCAGAGTGGAGATGTGTGGAAGGAGGAAAAAGTCCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS CAA 72 bp AGATTGAAATGGTTAATGAGGGCTTCCTTGGTATCATaGGTGACTTTGATGCCAACAATTTTCCCATGGGGT +
Preference number: 6 (lower is better)
Translates to: RLKWLMRASLVS*VTLMPTIFPWG
Trigger: ACCCCATGGGAAAATTGTTGGCATCAAAGTCACCAATGATACCAAGGAAGCCCTCATTAACCATTTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS TCA 72 bp GATCACAAAAGGCCACCTATTCACCCACTGCAACCATaGGATCAAAATCCAGTAGTCTTGCAAATTTCTTTT +
Preference number: 6 (lower is better)
Translates to: DHKRPPIHPLQP*DQNPVVLQISF
Trigger: AAAAGAAATTTGCAAGACTACTGGATTTTGATCTCATGGTTGCAGTGGGTGAATAGGTGGCCTTTTGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS CCA 72 bp AAACAATTTCAATGTCATAAGCAAGTGGGCCTCCAATaGAAAATCCCAGGTAAAAAGACACCTTCTCTATGC +
Preference number: 6 (lower is better)
Translates to: KQFQCHKQVGLQ*KIPGKKTPSLC
Trigger: GCATAGAGAAGGTGTCTTTTTACCTGGGATTTTCCATTGGAGGCCCACTTGCTTATGACATTGAAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379958.3
ENST00000620985.4
CDS CAA 90 bp TACATCCTCTTTTGTCCAATCATCTGTATTTTCTGGAAGGTTAAGTaGCTTTGCCATTCTGATACCAAACTGACTCTAGAAGAAACCGAA +
Preference number: 6 (lower is better)
Translates to: YILFCPIICIFWKVK*LCHSDTKLTLEETE
Trigger: TTCGGTTTCTTCTAGAGTCAGTTTGGTATCAGAATGGCAAAGCAACTTAACCTTCCAGAAAATACAGATGATTGGACAAAAGAGGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379958.3
CDS CAA 90 bp AAATACTTGTTTATCATCAGATTGAAATGGTTAATGAGGGCTTCCTaGGTATCATTGGTGACTTTGATGCCAACAATTTTCCCATGGGGT +
Preference number: 6 (lower is better)
Translates to: KYLFIIRLKWLMRAS*VSLVTLMPTIFPWG
Trigger: ACCCCATGGGAAAATTGTTGGCATCAAAGTCACCAATGATACCAAGGAAGCCCTCATTAACCATTTCAATCTGATGATAAACAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS TCA 72 bp GTAACGATATGGATTACTGAATTCATCAAATGGATATaGTACACATGTCAGGTCTATGGATGGTTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: VTIWITEFIKWI*YTCQVYGWLPF
Trigger: GAAAGGCAACCATCCATAGACCTGACATGTGTATCATATCCATTTGATGAATTCAGTAATCCATATCGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS GCA 72 bp TTTGTCCAATCATCTGTATTTTCTGGAAGGTTAAGTTaGTTTGCCATTCTGATACCCAGTAGTCTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: FVQSSVFSGRLS*FAILIPSSLAN
Trigger: ATTTGCAAGACTACTGGGTATCAGAATGGCAAAGCAACTTAACCTTCCAGAAAATACAGATGATTGGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446617.1
ENST00000620985.4
CDS CAA 90 bp TCTCTCCTTGATAACCAGCTATATTGTAAGTATCATACCGCCTTTTaGACTTCGGATACAATCTTTCCTTCACTTCATACTCTCTATCTT +
Preference number: 6 (lower is better)
Translates to: SLLDNQLYCKYHTAF*TSDTIFPSLHTLYL
Trigger: AAGATAGAGAGTATGAAGTGAAGGAAAGATTGTATCCGAAGTCAAAAAGGCGGTATGATACTTACAATATAGCTGGTTATCAAGGAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS CAA 72 bp TTTATCATCAGATTGAAATGGTTAATGAGGGCTTCCTaGGTATCATTGGTGACTTTGATGCCAACAATTTTC +
Preference number: 6 (lower is better)
Translates to: FIIRLKWLMRAS*VSLVTLMPTIF
Trigger: GAAAATTGTTGGCATCAAAGTCACCAATGATACCAAGGAAGCCCTCATTAACCATTTCAATCTGATGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4
CDS CAA 72 bp GATAACCAGCTATATTGTAAGTATCATACCGCCTTTTaGACTTCGGATACAATCTTTCCTTCACTTCATACT +
Preference number: 6 (lower is better)
Translates to: DNQLYCKYHTAF*TSDTIFPSLHT
Trigger: AGTATGAAGTGAAGGAAAGATTGTATCCGAAGTCAAAAAGGCGGTATGATACTTACAATATAGCTGGTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379958.3
ENST00000446617.1
ENST00000620985.4