RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000156671

Ensembl transcript IDs: ENST00000372687.4, ENST00000447533.5, ENST00000542569.6, ENST00000649316.2, ENST00000671730.1, ENST00000671800.1

Found 672 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCACGAAACACCGCTGCTCACAGAGTAAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATGGGTTCTGGTCTCTCTGTCACTGAC +
Preference number: 1 (lower is better)
Translates to: RARNTAAHRVKSYNP*RSLDPMGSGLSVTD
Trigger: GTCAGTGACAGAGAGACCAGAACCCATTGGATCAAGAGACCTGCAGGGATTATAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 90 bp CCATTGCACCCAGCCATGTTTTTAAGAGAATGGGTCTTGCTACCTTaGCCGGGCTGGAATGCAGTGGTTATTCATAGGCGTTATAACACA +
Preference number: 1 (lower is better)
Translates to: PLHPAMFLREWVLLP*PGWNAVVIHRRYNT
Trigger: TGTGTTATAACGCCTATGAATAACCACTGCATTCCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAAAAACATGGCTGGGTGCAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 90 bp GGGTCACACTGGCACTGCATCTTTTGTTGCATCTTTGGTGAAATATaGCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTA +
Preference number: 1 (lower is better)
Translates to: GSHWHCIFCCIFGEI*QPYICINEETNGIL
Trigger: TAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATATTTCACCAAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 90 bp AGAGAACATGGGAAACCAAATCCTTGCTCTCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGT +
Preference number: 1 (lower is better)
Translates to: REHGKPNPCSPTLLI*SGIGQSMVVQKESC
Trigger: ACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCATGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR CCA 90 bp ACATGGGAAACCAAATCCTTGCTCTCCTACTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTA +
Preference number: 1 (lower is better)
Translates to: TWETKSLLSYSADML*YWPEYGSTKRVLLL
Trigger: TAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR GCA 90 bp AAGATGAAGAAGATTCCAAAGAGGTTGAGAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTTGGTGTATCTAGGAAAAGGACAGAA +
Preference number: 1 (lower is better)
Translates to: KMKKIPKRLRTQDKV*KKFQLLGVSRKRTE
Trigger: TTCTGTCCTTTTCCTAGATACACCAAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTTCTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR GCA 90 bp AAGATGAAGAAGATTCCAAAGAGGTTGAGAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTTGGTGTATATTCGGTGACAAAGAAA +
Preference number: 1 (lower is better)
Translates to: KMKKIPKRLRTQDKV*KKFQLLGVYSVTKK
Trigger: TTTCTTTGTCACCGAATATACACCAAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTTCTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
3UTR CCA 90 bp GAAACCAAATCCTTGCTCTCCTACTCTGCTGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAA +
Preference number: 1 (lower is better)
Translates to: ETKSLLSYSADMLWY*PEYGSTKRVLLLYK
Trigger: TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR CCA 90 bp TCTCAAGTGAGAAATACAAAAATGATGTTCACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTT +
Preference number: 1 (lower is better)
Translates to: SQVRNTKMMFTADPN*GHSALAETCLHNFL
Trigger: AAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCTCACTTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 90 bp TTTGCGTGCTGTAAGTTTCTTTTCAGGAGAAAACAATTCTTTGCATaGATACCTCCCTACTTAACGGCATTAAGAACTTTATCTAACATC +
Preference number: 1 (lower is better)
Translates to: FACCKFLFRRKQFFA*IPPYLTALRTLSNI
Trigger: GATGTTAGATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCCTGAAAAGAAACTTACAGCACGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CCA 90 bp CTACCACAGGAACTTTCACATCTTCAAGTAATACTAGTTTCTCTGTaGATAGAGAGACATTTAGGTAGAATTCACAAAACAAAACATGTC +
Preference number: 1 (lower is better)
Translates to: LPQELSHLQVILVSL*IERHLGRIHKTKHV
Trigger: GACATGTTTTGTTTTGTGAATTCTACCTAAATGTCTCTCTATCCACAGAGAAACTAGTATTACTTGAAGATGTGAAAGTTCCTGTGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTESLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGAGTCTCCCAAGTAGCTaGGATTACAAGTGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTESLPSS*DYKCVP
Trigger: TGGCACGCACTTGTAATCCCAGCTACTTGGGAGACT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTEKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCTGGCCTCGAACTCCTaGCCTCGTGATCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLLASNS*PRDLPA
Trigger: GGCAGGCAGATCACGAGGTCAGGAGTTCGAGGCCAG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CAA 90 bp ATTCCTTCCAATGCTTCTCAGTCACGTTTCTCAGGTCAGGCTGTTTaGCCATTCTTCACAGGATCTGACACCCTTCCCACAGCCTTCACT +
Preference number: 2 (lower is better)
Translates to: IPSNASQSRFSGQAV*PFFTGSDTLPTAFT
Trigger: AGTGAAGGCTGTGGGAAGGGTGTCAGATCCTGTGAAGAATGGCAAAACAGCCTGACCTGAGAAACGTGACTGAGAAGCATTGGAAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTEGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 2 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFSLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAGCCTCCCGAGTAGCTaGGACTACAGGCATGGGCGT +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSLPSS*DYRHGR
Trigger: ACGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: CQPYICINEETNGILASTHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGGGCATTACATCCGGGTaGGGTGAGAAGGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLGITSG*GEKGVQ
Trigger: TTGGACCCCCTTCTCACCTCACCCGGATGTAATGCC...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCACATAAAGAATTCTTaGAGCACAGCCACGAAAGGT +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTEHIKNS*STATKG
Trigger: ACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTEDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR CCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVATADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: LSKNTQAETGHETPLLTEPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATCCCTGCAGGTCTCTTaGTCCAATGGGTTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVSLQVS*SNGFWS
Trigger: AGACCAGAACCCATTGGATCAAGAGACCTGCAGGGA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAATTCTTCACAGGATCTaGCACCCTTCCCACAGCCTT +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQILHRI*HPSHSL
Trigger: AAGGCTGTGGGAAGGGTGTCAGATCCTGTGAAGAAT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGATTCCAAAGAGGTTaGGAACCCAGGATAAAGTGT +
Preference number: 2 (lower is better)
Translates to: CQPYICINEETNGILASTRFQRG*EPRIKC
Trigger: ACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGTCCCTGCAGGTCTCTTaGTCCAATGGGTTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSLQVS*SNGFWS
Trigger: AGACCAGAACCCATTGGATCAAGAGACCTGCAGGGA...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CAA 90 bp ATACTCACTGAGGGTCACACTGGCACTGCATCTTTTGTTGCATCTTaGGTGAAATATGCCAGCCCTACATTTGCATTAATGAGGAGACCA +
Preference number: 2 (lower is better)
Translates to: ILTEGHTGTASFVAS*VKYASPTFALMRRP
Trigger: TGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATATTTCACCAAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCCTCAGTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTCCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAATGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: CQPYICINEETNGILASTTQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR GCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVTADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQTADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTAGTCTCCCAAGTAGCTaGGATTACAAGTGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLSLPSS*DYKCVP
Trigger: TGGCACGCACTTGTAATCCCAGCTACTTGGGAGACT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLLCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CAA 90 bp ACAGCAGACCCAAATTGGGGTCATTCAGCACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTACCCAATTCATTCAGGCTCCTATGTA +
Preference number: 2 (lower is better)
Translates to: TADPNWGHSALAETC*HNFLSYPIHSGSYV
Trigger: TACATAGGAGCCTGAATGAATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 2 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGGTCTCTTGATCCAATaGGTTCTGGTCTCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEGLLIQ*VLVSLS
Trigger: TGACAGAGAGACCAGAACCCATTGGATCAAGAGACC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGCTCTCCTACTCTGCTaGTATGCTCTGGTATTGGCC +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQALLLC*YALVLA
Trigger: GGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQELVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACTACATTCCTTCCAATaGTTCTCAGTCACGTTTCTC +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLHSFQ*FSVTFL
Trigger: GAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGC +
Preference number: 2 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKAMWPN*RPQNAS
Trigger: GCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 2 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACTCAGCCTCCTAAAGTaGTGGGATTATAGGCATAGT +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAELSLLK*WDYRHS
Trigger: ACTATGCCTATAATCCCAGCACTTTAGGAGGCTGAG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: NYFVITANLPPSKPLTLYAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLCQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAGGCACGAAACACCGCTaGTCACAGAGTAAAGAGTTA +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEGTKHR*SQSKEL
Trigger: TAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCC...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLLSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAAGATTCCAAAGAGGTTaGGAACCCAGGATAAAGTGT +
Preference number: 2 (lower is better)
Translates to: RNTKMMFTADPNWGHSALRFQRG*EPRIKC
Trigger: ACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR TCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGCATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQCNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAGAAACTGCCTTTTGTTaGATACAGTCAAAGAAGACT +
Preference number: 2 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVETAFC*IQSKKT
Trigger: AGTCTTCTTTGACTGTATTCAACAAAAGGCAGTTTC...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGCAGGTCAGGCTGTTTTaGCATTCTTCACAGGATCTG +
Preference number: 2 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKQVRLF*HSSQDL
Trigger: CAGATCCTGTGAAGAATGGCAAAACAGCCTGACCTG...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 2 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 2 (lower is better)
Translates to: GHSALAETCLHNFLSYPIIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 2 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQELSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGTCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTGAAATTCCAGCTTCTTaGTGTATATTCGGTGACAAA +
Preference number: 2 (lower is better)
Translates to: GHSALAETCLHNFLSYPIEIPAS*CIFGDK
Trigger: TTTGTCACCGAATATACACCAAGAAGCTGGAATTTC...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
3UTR-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQETQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPCQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGTTCTATTTTTGCCCTTaGAATTCTGGTCAGAAAACT +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLFYFCP*NSGQKT
Trigger: AGTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAA...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 2 (lower is better)
Translates to: YHSVLSPAISGTNFPYAETKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTTGCCCTTGCAATTCTaGTCAGAAAACTATGGAGAG +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQLPLQF*SENYGE
Trigger: CTCTCCATAGTTTTCTGACCAGAATTGCAAGGGCAA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAGCTATAAAACAATCTaGTTCCTCTGTTTCCCATTT +
Preference number: 2 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSYKTI*FLCFPF
Trigger: AAATGGGAAACAGAGGAACCAGATTGTTTTATAGCT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: NYFVITANLPPSKPLTLYFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 2 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATG +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPKSYNP*RSLDPM
Trigger: CATTGGATCAAGAGACCTGCAGGGATTATAACTCTT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQCNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCCGCATTATTTAACTaGCTGGTTCTAAGGATAAGT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSALFN*LVLRIS
Trigger: ACTTATCCTTAGAACCAGTCAGTTAAATAATGCGGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGAAACTGCCTTTTGTTaGATACAGTCAAAGAAGACT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPETAFC*IQSKKT
Trigger: AGTCTTCTTTGACTGTATTCAACAAAAGGCAGTTTC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 2 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 2 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 3 (lower is better)
Translates to: LSKNTQAETGHETPLLTEHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp CCAGCCATGTTTTTAAGAGAATGGGTCTTGCTACCTTaGCCGGGCTGGAATGCAGTGGTTATTCATAGGCGT +
Preference number: 3 (lower is better)
Translates to: PAMFLREWVLLP*PGWNAVVIHRR
Trigger: ACGCCTATGAATAACCACTGCATTCCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAAAAACATGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CCA 72 bp TTCACCCAGATAAGGAAGGAGCAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAGAATGCCAGCACCTTT +
Preference number: 3 (lower is better)
Translates to: FTQIRKEQASAM*PNCRPQNASTF
Trigger: AAAGGTGCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTGCTCCTTCCTTATCTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp GCCTCCTCAGAACCTGGGACTATAGCCTTGCACCACTaGACTCGGCTTAACATTTTAGCATTAATGTTGCCA +
Preference number: 3 (lower is better)
Translates to: ASSEPGTIALHH*TRLNILALMLP
Trigger: TGGCAACATTAATGCTAAAATGTTAAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 3 (lower is better)
Translates to: CQPYICINEETNGILASTWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR CAA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 3 (lower is better)
Translates to: LVPANFASPIKYQFPLSLPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 3 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGTTCTATTTTTGCCCTaGCAATTCTGGTCAGAAAAC +
Preference number: 3 (lower is better)
Translates to: LSKNTQAETGHETPLLTEVLFLP*QFWSEN
Trigger: GTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAAC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp AACACCGCTGCTCACAGAGTAAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATGGGTTCTGGTCTCTCT +
Preference number: 3 (lower is better)
Translates to: NTAAHRVKSYNP*RSLDPMGSGLS
Trigger: AGAGAGACCAGAACCCATTGGATCAAGAGACCTGCAGGGATTATAACTCTTTACTCTGTGAGCAGCGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 3 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 3 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACCCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 3 (lower is better)
Translates to: NYFVITANLPPSKPLTLYPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp ATAAGGAAGGAGCAAGCTTCTGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGCACCTTTTCTAAGTTT +
Preference number: 3 (lower is better)
Translates to: IRKEQASAMWPN*RPQNASTFSKF
Trigger: AAACTTAGAAAAGGTGCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTGCTCCTTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 3 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR CAA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQELREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: NYFVITANLPPSKPLTLYLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp GGGAAACCAAATCCTTGCTCTCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGTATGGTAGTACAAAAA +
Preference number: 3 (lower is better)
Translates to: GKPNPCSPTLLI*SGIGQSMVVQK
Trigger: TTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR GCA 72 bp TGTTGCATCTTTGGTGAAATATGCCAGCCCTACATTTaGATTAATGAGGAGACCAATGGCATCCTAGCCAGT +
Preference number: 3 (lower is better)
Translates to: CCIFGEICQPYI*INEETNGILAS
Trigger: ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATATTTCACCAAAGATGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CCA 72 bp TCCTTGCTCTCCTACTCTGCTGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: SLLSYSADMLWY*PEYGSTKRVLL
Trigger: CAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR CCA 72 bp ACCAAATCCTTGCTCTCCTACTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTC +
Preference number: 3 (lower is better)
Translates to: TKSLLSYSADML*YWPEYGSTKRV
Trigger: GACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 3 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCCACATAAAGAATTCTaGCAGCACAGCCACGAAAGG +
Preference number: 3 (lower is better)
Translates to: LVPANFASPIKYQFPLSLPHKEF*QHSHER
Trigger: CCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR TCA 72 bp CCATTTATTTTTATGGATGCAGCCATTTTTCCCTCATaGATACTCACTGAGGGTCACACTGGCACTGCATCT +
Preference number: 3 (lower is better)
Translates to: PFIFMDAAIFPS*ILTEGHTGTAS
Trigger: AGATGCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGCTGCATCCATAAAAATAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 3 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp TGGCACTGCATCTTTTGTTGCATCTTTGGTGAAATATaGCAGCCCTACATTTGCATTAATGAGGAGACCAAT +
Preference number: 3 (lower is better)
Translates to: WHCIFCCIFGEI*QPYICINEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATATTTCACCAAAGATGCAACAAAAGATGCAGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp AAGATTCCAAAGAGGTTGAGAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTTGGTGTATATTCGGTG +
Preference number: 3 (lower is better)
Translates to: KIPKRLRTQDKV*KKFQLLGVYSV
Trigger: CACCGAATATACACCAAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
3UTR-3UTR CAA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFNKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 3 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAAGAAATTCCAGCTTCTaGGTGTATCTAGGAAAAGGA +
Preference number: 3 (lower is better)
Translates to: YHSVLSPAISGTNFPYAERNSSF*VYLGKG
Trigger: TCCTTTTCCTAGATACACCAAGAAGCTGGAATTTCT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTAAGATTCCAAAGAGGTaGAGAACCCAGGATAAAGTG +
Preference number: 3 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFKIPKR*RTQDKV
Trigger: CACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
3UTR-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCTAGAAGTTCTATTTTaGCCCTTGCAATTCTGGTCA +
Preference number: 3 (lower is better)
Translates to: LVPANFASPIKYQFPLSLLEVLF*PLQFWS
Trigger: TGACCAGAATTGCAAGGGCAAAAATAGAACTTCTAG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp GACAGAAAGATCATTTTAAAGCTACATTCCTTCCAATaGTTCTCAGTCACGTTTCTCAGGTCAGGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: DRKIILKLHSFQ*FSVTFLRSGCF
Trigger: AAAACAGCCTGACCTGAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAGCTTTAAAATGATCTTTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR GCA 72 bp AAGATTCCAAAGAGGTTGAGAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTTGGTGTATCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: KIPKRLRTQDKV*KKFQLLGVSRK
Trigger: TTTCCTAGATACACCAAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
3UTR CCA 72 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCTGAGACTTGTTTGCAT +
Preference number: 3 (lower is better)
Translates to: RNTKMMFTADPN*GHSALAETCLH
Trigger: ATGCAAACAAGTCTCAGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 3 (lower is better)
Translates to: YHSVLSPAISGTNFPYAESIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 3 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 3 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKLPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAATTTTACAATCCCCATaGCAGTCTGTTGTTAGGTCT +
Preference number: 3 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKILQSP*QSVVRS
Trigger: AGACCTAACAACAGACTGCAATGGGGATTGTAAAAT...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGTTCTATTTTTGCCCTaGCAATTCTGGTCAGAAAAC +
Preference number: 3 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPVLFLP*QFWSEN
Trigger: GTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAAC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR GCA 72 bp TTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATaGCTGAATACCTTAAAGTACTGGCAAATGACTATA +
Preference number: 3 (lower is better)
Translates to: LDYSTRQLSCLK*LNTLKYWQMTI
Trigger: TATAGTCATTTGCCAGTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CCA 72 bp CTGTCATCTAACAACTATAGCACAAAGAAGTTATTCTaGGTACCTATACCACTAACATTAAGCCCATTTATT +
Preference number: 3 (lower is better)
Translates to: LSSNNYSTKKLF*VPIPLTLSPFI
Trigger: AATAAATGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTTGTTAGATGACAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CCA 72 bp ATATTTACTTATGTACAAACACTGTGCTTCAAGGTATaGCTACCACAGGAACTTTCACATCTTCAAGTAATA +
Preference number: 3 (lower is better)
Translates to: IFTYVQTLCFKV*LPQELSHLQVI
Trigger: TATTACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGGAGGCGGGGGCGGTaGCGACTGCGCGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTWRRGR*RLRAGI
Trigger: GATGCCTGCGCGCAGTCGCCACCGCCCCCGCCTCCA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671730.1
CDS-3UTR TCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCTGGCCTCGAACTCCTaGCCTCGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTELASNS*PRDLPA
Trigger: GGCAGGCAGATCACGAGGTCAGGAGTTCGAGGCCAG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCCCGCCTCGCCGGAGTaGAGCGCCTCAAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIPASPE*SASSGG
Trigger: CCCGCCGCTTGAGGCGCTTCACTCCGGCGAGGCGGG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671730.1
CDS-3UTR GCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCATTTCCTCCTCCGCTaGCTCCGCGGTCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTHFLLR*LRGPSR
Trigger: CCGACTCGGACCGCGGAGGCAGCGGAGGAGGAAATG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTCATTTCCTCCTCCGCTaGCTCCGCGGTCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAHFLLR*LRGPSR
Trigger: CCGACTCGGACCGCGGAGGCAGCGGAGGAGGAAATG...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCTGGCCTCGAACTCCTaGCCTCGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASLASNS*PRDLPA
Trigger: GGCAGGCAGATCACGAGGTCAGGAGTTCGAGGCCAG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCATTTCCTCCTCCGCTaGCCTTGGCAGCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFHFLLR*PWQQAP
Trigger: GGGCGCCTGCTGCCAAGGGCAGCGGAGGAGGAAATG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGCCTCCCGAGTAGCTaGGACTACAGGCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSLPSS*DYRHGR
Trigger: ACGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTERRMQS*LGPAIS
Trigger: GGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTELMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGTCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTESPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCATGGCAAAGGCCCATaGGATTCTAGGAACGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEHGKGP*DSRNAV
Trigger: GACAGCGTTCCTAGAATCCCATGGGCCTTTGCCATG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTESLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGTGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACTGGCCTCGAACTCCTaGCCTCGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLASNS*PRDLPA
Trigger: GGCAGGCAGATCACGAGGTCAGGAGTTCGAGGCCAG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAGCCACACAGCTACATaGTTGGTAGTCCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASHTAT*LVVQRR
Trigger: TCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGCCACACAGCTACATaGTTGGTAGTCCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSHTAT*LVVQRR
Trigger: TCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACATTTCCTCCTCCGCTaGCTCCGCGGTCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEHFLLR*LRGPSR
Trigger: CCGACTCGGACCGCGGAGGCAGCGGAGGAGGAAATG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFLQVLS*HGEGGH
Trigger: GTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCTGGGACTACAGGCATaGGCGTGCACCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLLGLQA*ACTTTP
Trigger: GGGCGTGGTGGTGCACGCCCATGCCTGTAGTCCCAG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCTGGGACTACAGGCATaGGCGTGCACCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLLGLQA*ACTTTP
Trigger: GGGCGTGGTGGTGCACGCCCATGCCTGTAGTCCCAG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTLMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCTGGCCTCGAACTCCTaGCCTCGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCILASNS*PRDLPA
Trigger: GGCAGGCAGATCACGAGGTCAGGAGTTCGAGGCCAG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTGGGTCATGGAACCCATaGGACTGTCACTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTGSWNP*DCHCCS
Trigger: GCTACAACAGTGACAGTCCCATGGGTTCCATGACCC...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAG +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTGPSQS*ESSPLQ
Trigger: CTGTAATGGGGAGCTTTCCCATGACTGTGACGGACC...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCATGGCAAAGGCCCATaGGATTCTAGGAACGCTGTC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTHGKGP*DSRNAV
Trigger: GACAGCGTTCCTAGAATCCCATGGGCCTTTGCCATG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLQVLS*HGEGGH
Trigger: GTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGTCCCCTAAGACTTTaGTTTCCAGAGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTCPLRL*FPEEET
Trigger: GGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTCCCTGCAGGTCTCTTaGTCCAATGGGTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASSLQVS*SNGFWS
Trigger: AGACCAGAACCCATTGGATCAAGAGACCTGCAGGGA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGGCATTACATCCGGGTaGGGTGAGAAGGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGGITSG*GEKGVQ
Trigger: TTGGACCCCCTTCTCACCTCACCCGGATGTAATGCC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASELIRT*HFLLRC
Trigger: GCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAAGTATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATACT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACATTTCCTCCTCCGCTaGCTCCGCGGTCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEHFLLR*LRGPSR
Trigger: CCGACTCGGACCGCGGAGGCAGCGGAGGAGGAAATG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAG +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASGPSQS*ESSPLQ
Trigger: CTGTAATGGGGAGCTTTCCCATGACTGTGACGGACC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCACATACTTCCGTCATaGCAAAGGCCCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTHILPS*QRPMGF
Trigger: GAATCCCATGGGCCTTTGCCATGACGGAAGTATGTG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAGTCTCCCAAGTAGCTaGGATTACAAGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSLPSS*DYKCVP
Trigger: TGGCACGCACTTGTAATCCCAGCTACTTGGGAGACT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTLCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTGGGACTACAGGCATaGGCGTGCACCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQELGLQA*ACTTTP
Trigger: GGGCGTGGTGGTGCACGCCCATGCCTGTAGTCCCAG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAAGCCTCCCGAGTAGCTaGGACTACAGGCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAESLPSS*DYRHGR
Trigger: ACGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTAGCCTCCCGAGTAGCTaGGACTACAGGCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPISLPSS*DYRHGR
Trigger: ACGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFRRMQS*LGPAIS
Trigger: GGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTGTCCCCTAAGACTTTaGTTTCCAGAGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASCPLRL*FPEEET
Trigger: GGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATACATCCGGGTGAGGTaGGAAGGGGGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVYIRVR*EGGPKP
Trigger: AGGTTTTGGACCCCCTTCTCACCTCACCCGGATGTA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFELIRT*HFLLRC
Trigger: GCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTC...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGTGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTECQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAAGTATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAESISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATACT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTATATCTGGGAGTGGTaGATAGGTCTGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTYIWEW*IGLHVR
Trigger: CCTGACATGCAGACCTATCCACCACTCCCAGATATA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCATGGCAAAGGCCCATaGGATTCTAGGAACGCTGTC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFHGKGP*DSRNAV
Trigger: GACAGCGTTCCTAGAATCCCATGGGCCTTTGCCATG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTTADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCTGGGACTACAGGCATaGGCGTGCACCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFILGLQA*ACTTTP
Trigger: GGGCGTGGTGGTGCACGCCCATGCCTGTAGTCCCAG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACGCTCTCCTACTCTGCTaGTATGCTCTGGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNALLLC*YALVLA
Trigger: GGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGC...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGCTCTCCTACTCTGCTaGTATGCTCTGGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQALLLC*YALVLA
Trigger: GGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGLMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQELIRT*HFLLRC
Trigger: GCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAGCCACACAGCTACATaGTTGGTAGTCCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSHTAT*LVVQRR
Trigger: TCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTETQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGAMWPN*RPQNAS
Trigger: GCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAGGGTCATGGAACCCATaGGACTGTCACTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVGSWNP*DCHCCS
Trigger: GCTACAACAGTGACAGTCCCATGGGTTCCATGACCC...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAG +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQGPSQS*ESSPLQ
Trigger: CTGTAATGGGGAGCTTTCCCATGACTGTGACGGACC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTATATCTGGGAGTGGTaGATAGGTCTGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASYIWEW*IGLHVR
Trigger: CCTGACATGCAGACCTATCCACCACTCCCAGATATA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCATGGCAAAGGCCCATaGGATTCTAGGAACGCTGTC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGHGKGP*DSRNAV
Trigger: GACAGCGTTCCTAGAATCCCATGGGCCTTTGCCATG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPLQVLS*HGEGGH
Trigger: GTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASTADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLSLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPISLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAGCCTCCCGAGTAGCTaGGACTACAGGCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESLPSS*DYRHGR
Trigger: ACGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIRRMQS*LGPAIS
Trigger: GGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCG...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAERRMQS*LGPAIS
Trigger: GGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASMLAM*FHQVGA
Trigger: AGCACCGACTTGATGGAATCACATTGCTAACATTGA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGTCCCCTAAGACTTTaGTTTCCAGAGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGCPLRL*FPEEET
Trigger: GGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACA...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSQSVL*RALMKG
Trigger: CCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACCTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGTGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATACATCCGGGTGAGGTaGGAAGGGGGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALYIRVR*EGGPKP
Trigger: AGGTTTTGGACCCCCTTCTCACCTCACCCGGATGTA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGGCATTACATCCGGGTaGGGTGAGAAGGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYGITSG*GEKGVQ
Trigger: TTGGACCCCCTTCTCACCTCACCCGGATGTAATGCC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGATTCCATCAAGTCGGTaGTTATTGCATAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEIPSSR*LLHKMS
Trigger: GGACATTTTATGCAATAAGCACCGACTTGATGGAAT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTATAGCACAGAATCATaGCACATACTTCCGTCATGG +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAYSTES*HILPSW
Trigger: CCATGACGGAAGTATGTGGCATGATTCTGTGCTATA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTCQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCISPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLSPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAAGTATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPSISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATACT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGGGTCATGGAACCCATaGGACTGTCACTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEGSWNP*DCHCCS
Trigger: GCTACAACAGTGACAGTCCCATGGGTTCCATGACCC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTATATCTGGGAGTGGTaGATAGGTCTGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFYIWEW*IGLHVR
Trigger: CCTGACATGCAGACCTATCCACCACTCCCAGATATA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLQVLS*HGEGGH
Trigger: GTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGCTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQLQVLS*HGEGGH
Trigger: GTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAG...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASSADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQLCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCGGTCTCTTGATCCAATaGGTTCTGGTCTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFGLLIQ*VLVSLS
Trigger: TGACAGAGAGACCAGAACCCATTGGATCAAGAGACC...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCTGTGCTTCAAGGTATaGCTACCACAGGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASLCFKV*LPQELS
Trigger: TGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGAAATTCCAGCTTCTTaGTGTATATTCGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTEEIPAS*CIFGDK
Trigger: TTTGTCACCGAATATACACCAAGAAGCTGGAATTTC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGCTCTCCTACTCTGCTaGTATGCTCTGGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFALLLC*YALVLA
Trigger: GGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTACATCCGGGTGAGGTaGGAAGGGGGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYYIRVR*EGGPKP
Trigger: AGGTTTTGGACCCCCTTCTCACCTCACCCGGATGTA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGGCATTACATCCGGGTaGGGTGAGAAGGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQGITSG*GEKGVQ
Trigger: TTGGACCCCCTTCTCACCTCACCCGGATGTAATGCC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGGCATTACATCCGGGTaGGGTGAGAAGGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIGITSG*GEKGVQ
Trigger: TTGGACCCCCTTCTCACCTCACCCGGATGTAATGCC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALSPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCTCAGCCTCCTAAAGTaGTGGGATTATAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFLSLLK*WDYRHS
Trigger: ACTATGCCTATAATCCCAGCACTTTAGGAGGCTGAG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAGTATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKSISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATACT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAKSYNP*RSLDPM
Trigger: CATTGGATCAAGAGACCTGCAGGGATTATAACTCTT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCTGCTGATTATACACTaGCCAGCTTTCCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASLLIIH*PAFPFF
Trigger: AAAGAAAGGGAAAGCTGGGCAGTGTATAATCAGCAG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAG +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFGPSQS*ESSPLQ
Trigger: CTGTAATGGGGAGCTTTCCCATGACTGTGACGGACC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTCAGGCACTCGCTCATaGACTATAACCATAATGAAA +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASGTRS*TITIMK
Trigger: TTTCATTATGGTTATAGTCCATGAGCGAGTGCCTGA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTCACATACTTCCGTCATaGCAAAGGCCCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIHILPS*QRPMGF
Trigger: GAATCCCATGGGCCTTTGCCATGACGGAAGTATGTG...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 4 (lower is better)
Translates to: LSKNTQAETGHETPLLTETKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAELCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAGGTCTCTTGATCCAATaGGTTCTGGTCTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVGLLIQ*VLVSLS
Trigger: TGACAGAGAGACCAGAACCCATTGGATCAAGAGACC...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCTGTGCTTCAAGGTATaGCTACCACAGGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFLCFKV*LPQELS
Trigger: TGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CAA 72 bp GAGGGTCACACTGGCACTGCATCTTTTGTTGCATCTTaGGTGAAATATGCCAGCCCTACATTTGCATTAATG +
Preference number: 4 (lower is better)
Translates to: EGHTGTASFVAS*VKYASPTFALM
Trigger: CATTAATGCAAATGTAGGGCTGGCATATTTCACCAAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPRRMQS*LGPAIS
Trigger: GGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTCNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATGGAGTGCAGTGGAGTaGTCTCAGCTCAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALWSAVE*SQLNAN
Trigger: GTTTGCATTGAGCTGAGATCACTCCACTGCACTCCA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATCCCTGCAGGTCTCTTaGTCCAATGGGTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESLQVS*SNGFWS
Trigger: AGACCAGAACCCATTGGATCAAGAGACCTGCAGGGA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTGAAACTGCCTTTTGTTaGATACAGTCAAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAETAFC*IQSKKT
Trigger: AGTCTTCTTTGACTGTATTCAACAAAAGGCAGTTTC...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCTGCCATATATCTGCTaGTTATACACTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGLPYIC*LYTAQL
Trigger: AAGCTGGGCAGTGTATAATCAGCAGATATATGGCAG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYELIRT*HFLLRC
Trigger: GCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTAGCCACACAGCTACATaGTTGGTAGTCCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSHTAT*LVVQRR
Trigger: TCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAGCCACACAGCTACATaGTTGGTAGTCCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKSHTAT*LVVQRR
Trigger: TCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTATTCCATCAAGTCGGTaGTTATTGCATAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAIPSSR*LLHKMS
Trigger: GGACATTTTATGCAATAAGCACCGACTTGATGGAAT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCAGGTCAGGCTGTTTTaGCATTCTTCACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIQVRLF*HSSQDL
Trigger: CAGATCCTGTGAAGAATGGCAAAACAGCCTGACCTG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR GCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYAMWPN*RPQNAS
Trigger: GCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATCCCCAAGGCTGGAGTaGAGTGGCATGATTACAGCT +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESPRLE*SGMITA
Trigger: AGCTGTAATCATGCCACTGCACTCCAGCCTTGGGGA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCACATAAAGAATTCTTaGAGCACAGCCACGAAAGGT +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFHIKNS*STATKG
Trigger: ACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTGGCACGAAACACCGCTaGTCACAGAGTAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLGTKHR*SQSKEL
Trigger: TAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCC...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAGGGTCATGGAACCCATaGGACTGTCACTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEGSWNP*DCHCCS
Trigger: GCTACAACAGTGACAGTCCCATGGGTTCCATGACCC...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAG +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYGPSQS*ESSPLQ
Trigger: CTGTAATGGGGAGCTTTCCCATGACTGTGACGGACC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAATATATCTGGGAGTGGTaGATAGGTCTGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEYIWEW*IGLHVR
Trigger: CCTGACATGCAGACCTATCCACCACTCCCAGATATA...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAGAATATATCTGGGAGTaGTGGATAGGTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQEYIWE*WIGLHV
Trigger: GACATGCAGACCTATCCACCACTCCCAGATATATTC...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACGAATATATCTGGGAGTaGTGGATAGGTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNEYIWE*WIGLHV
Trigger: GACATGCAGACCTATCCACCACTCCCAGATATATTC...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACATGGCAAAGGCCCATaGGATTCTAGGAACGCTGTC +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEHGKGP*DSRNAV
Trigger: GACAGCGTTCCTAGAATCCCATGGGCCTTTGCCATG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTACAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCITADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 4 (lower is better)
Translates to: CQPYICINEETNGILASTSNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAGCCTCCCATGTAGCTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISLPCS*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGCTACATGGGAGGCT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTGGTCTCTTGATCCAATaGGTTCTGGTCTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLGLLIQ*VLVSLS
Trigger: TGACAGAGAGACCAGAACCCATTGGATCAAGAGACC...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CAA 72 bp CCAAATTGGGGTCATTCAGCACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTACCCAATTCATTCAGGC +
Preference number: 4 (lower is better)
Translates to: PNWGHSALAETC*HNFLSYPIHSG
Trigger: GCCTGAATGAATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACCCCAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVSMLAM*FHQVGA
Trigger: AGCACCGACTTGATGGAATCACATTGCTAACATTGA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSMLAM*FHQVGA
Trigger: AGCACCGACTTGATGGAATCACATTGCTAACATTGA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATGTCCCCTAAGACTTTaGTTTCCAGAGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQECPLRL*FPEEET
Trigger: GGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESQSVL*RALMKG
Trigger: CCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAATTCTTCACAGGATCTaGCACCCTTCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPILHRI*HPSHSL
Trigger: AAGGCTGTGGGAAGGGTGTCAGATCCTGTGAAGAAT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR TCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGCTCTCCTACTCTGCTaGTATGCTCTGGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIALLLC*YALVLA
Trigger: GGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAACTCATGAATACTCACTaGGGGTCACACTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKLMNTH*GSHWHC
Trigger: GCAGTGCCAGTGTGACCCTCAGTGAGTATTCATGAG...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR TCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACCTGGTCTCTTTTACCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYLVSFT*AQVILL
Trigger: CAGGAGGATCACTTGAGCTCAGGTAAAAGAGACCAG...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGTGGAGTGCAGTGGCATaGTTACAGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKWSAVA*LQLTVA
Trigger: GGCTACAGTGAGCTGTAATCATGCCACTGCACTCCA...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTTCTTATTAGTCACCTaGAGCATTCTGACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASFLLVT*SILTFD
Trigger: ATCAAAGGTCAGAATGCTTCAGGTGACTAATAAGAA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTCAATATGTATTTTCTaGAATTTTCGGACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASICIF*NFRTES
Trigger: GCTCTCAGTCCGAAAATTGCAGAAAATACATATTGA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACTACATTCCTTCCAATaGTTCTCAGTCACGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVLHSFQ*FSVTFL
Trigger: GAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIAMWPN*RPQNAS
Trigger: GCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGCTATGTGGCCTAATTaGAGGCCTCAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKAMWPN*RPQNAS
Trigger: GCTGGCATTCTGAGGCCTGCAATTAGGCCACATAGC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGTGATCTCAGCTCAATaGAAACTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPVISAQ*KLHLLG
Trigger: ACCCAGGAGGTGGAGTTTGCATTGAGCTGAGATCAC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCACCTAGGCTGGAGTaGAGTGGAGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSPRLE*SGVISA
Trigger: AGCTGAGATCACTCCACTGCACTCCAGCCTAGGTGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCTCAGCCTCCTAAAGTaGTGGGATTATAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCILSLLK*WDYRHS
Trigger: ACTATGCCTATAATCCCAGCACTTTAGGAGGCTGAG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCTCAGCCTCCTAAAGTaGTGGGATTATAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLLSLLK*WDYRHS
Trigger: ACTATGCCTATAATCCCAGCACTTTAGGAGGCTGAG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAGGCACGAAACACCGCTaGTCACAGAGTAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALGTKHR*SQSKEL
Trigger: TAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCC...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGGGTCATGGAACCCATaGGACTGTCACTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIGSWNP*DCHCCS
Trigger: GCTACAACAGTGACAGTCCCATGGGTTCCATGACCC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQQSHSK*QRLDVI
Trigger: AATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAATCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAESADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAACAGCAGACCCAAATTaGGGTCATTCAGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALTADPN*GHSALA
Trigger: AGCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASSNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAGCCTCCTCAGAACCTaGGACTATAGCCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISLLRT*DYSLAP
Trigger: TGGTGCAAGGCTATAGTCCCAGGTTCTGAGGAGGCT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAGTCTCCCAAGTAGCTaGGATTACAAGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESLPSS*DYKCVP
Trigger: TGGCACGCACTTGTAATCCCAGCTACTTGGGAGACT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPLCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAAGGCTGGAGTGCAGTaGCATGATTACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEKAGVQ*HDYSSL
Trigger: CAGTGAGCTGTAATCATGCCACTGCACTCCAGCCTT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTGTCCCCTAAGACTTTaGTTTCCAGAGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPCPLRL*FPEEET
Trigger: GGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSQSVL*RALMKG
Trigger: CCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSQSVL*RALMKG
Trigger: CCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTAGATTCCAAAGAGGTTaGGAACCCAGGATAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIRFQRG*EPRIKC
Trigger: ACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCT...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGCCATTTTTCCCTCATaGATACTCACTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPAIFPS*ILTEGH
Trigger: GTGACCCTCAGTGAGTATTCATGAGGGAAAAATGGC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGAGCAAGTGCAAGGCTaGAAAGTTATTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGEQVQG*KVILQS
Trigger: GGATTGTAAAATAACTTTTCAGCCTTGCACTTGCTC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATCACCTGAAGCATTCTaGCCTTTGATGTTACTAACA +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSPEAF*PLMLLT
Trigger: TGTTAGTAACATCAAAGGTCAGAATGCTTCAGGTGA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATCACCTGAAGCATTCTaGCCTTTGATGTTACTAACA +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVSPEAF*PLMLLT
Trigger: TGTTAGTAACATCAAAGGTCAGAATGCTTCAGGTGA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTATAGCACAGAATCATaGCACATACTTCCGTCATGG +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLYSTES*HILPSW
Trigger: CCATGACGGAAGTATGTGGCATGATTCTGTGCTATA...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCICQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTCACATAAAGAATTCTTaGAGCACAGCCACGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIHIKNS*STATKG
Trigger: ACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTG...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTTCTATTTTTGCCCTTaGAATTCTGGTCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: ICQPYICINEETNGILASFYFCP*NSGQKT
Trigger: AGTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTAAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVKSYNP*RSLDPM
Trigger: CATTGGATCAAGAGACCTGCAGGGATTATAACTCTT...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGKSYNP*RSLDPM
Trigger: CATTGGATCAAGAGACCTGCAGGGATTATAACTCTT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGGCACGAAACACCGCTaGTCACAGAGTAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPGTKHR*SQSKEL
Trigger: TAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGGCACGAAACACCGCTaGTCACAGAGTAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYGTKHR*SQSKEL
Trigger: TAACTCTTTACTCTGTGAGCAGCGGTGTTTCGTGCC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTAATTCAAGTCAGTTATaGGTCCGTCACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFNSSQL*VRHSHG
Trigger: CCCATGACTGTGACGGACCCATAACTGACTTGAATT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAAATTCAAGTCAGTTATaGGTCCGTCACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALNSSQL*VRHSHG
Trigger: CCCATGACTGTGACGGACCCATAACTGACTTGAATT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTATCAGGCACTCGCTCATaGACTATAACCATAATGAAA +
Preference number: 4 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVSGTRS*TITIMK
Trigger: TTTCATTATGGTTATAGTCCATGAGCGAGTGCCTGA...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACTCAGGCACTCGCTCATaGACTATAACCATAATGAAA +
Preference number: 4 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNSGTRS*TITIMK
Trigger: TTTCATTATGGTTATAGTCCATGAGCGAGTGCCTGA...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCACATACTTCCGTCATaGCAAAGGCCCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPHILPS*QRPMGF
Trigger: GAATCCCATGGGCCTTTGCCATGACGGAAGTATGTG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGCACATACTTCCGTCATaGCAAAGGCCCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQHILPS*QRPMGF
Trigger: GAATCCCATGGGCCTTTGCCATGACGGAAGTATGTG...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEQSHSK*QRLDVI
Trigger: AATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALSADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCILSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCAAGCTTCTGCTATGTaGCCTAATTGCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIQASAM*PNCRPQ
Trigger: CTGAGGCCTGCAATTAGGCCACATAGCAGAAGCTTG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGAGTCTCCCAAGTAGCTaGGATTACAAGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSLPSS*DYKCVP
Trigger: TGGCACGCACTTGTAATCCCAGCTACTTGGGAGACT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCTTTGTTGCCCAGGCTaGTCTCTTTTACCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFILCCPG*SLLPEL
Trigger: GAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAAAG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTTTGCCCTTGCAATTCTaGTCAGAAAACTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPILPLQF*SENYGE
Trigger: CTCTCCATAGTTTTCTGACCAGAATTGCAAGGGCAA...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGTTGCCCTTGCAATTCTaGTCAGAAAACTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLLPLQF*SENYGE
Trigger: CTCTCCATAGTTTTCTGACCAGAATTGCAAGGGCAA...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTTCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFSMLAM*FHQVGA
Trigger: AGCACCGACTTGATGGAATCACATTGCTAACATTGA...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAACATGGGCAGCCAAGATaGAGAAGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKHGQPR*RRFQRG
Trigger: ACCTCTTTGGAATCTTCTTCATCTTGGCTGCCCATG...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR TCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTGAGCAAGTGCAAGGCTaGAAAGTTATTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIEQVQG*KVILQS
Trigger: GGATTGTAAAATAACTTTTCAGCCTTGCACTTGCTC...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATCCGCATTATTTAACTaGCTGGTTCTAAGGATAAGT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSALFN*LVLRIS
Trigger: ACTTATCCTTAGAACCAGTCAGTTAAATAATGCGGA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGAAACTGCCTTTTGTTaGATACAGTCAAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGETAFC*IQSKKT
Trigger: AGTCTTCTTTGACTGTATTCAACAAAAGGCAGTTTC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTTCTTATTAGTCACCTaGAGCATTCTGACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGFLLVT*SILTFD
Trigger: ATCAAAGGTCAGAATGCTTCAGGTGACTAATAAGAA...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTATTCCATCAAGTCGGTaGTTATTGCATAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGIPSSR*LLHKMS
Trigger: GGACATTTTATGCAATAAGCACCGACTTGATGGAAT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTCAATATGTATTTTCTaGAATTTTCGGACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFSICIF*NFRTES
Trigger: GCTCTCAGTCCGAAAATTGCAGAAAATACATATTGA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTATTTCTCCCATACACTaGCATATATCTTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGISPIH*HISFQY
Trigger: GTACTGGAAAGATATATGGCAGTGTATGGGAGAAAT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLTQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGCCTACTCTGCTGATATaGTCTGGTATTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKPTLLI*SGIGQS
Trigger: ACTCTGGCCAATACCAGAGCATATCAGCAGAGTAGG...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTCACATAAAGAATTCTTaGAGCACAGCCACGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFHIKNS*STATKG
Trigger: ACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTG...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACAATTCAAGTCAGTTATaGGTCCGTCACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYNSSQL*VRHSHG
Trigger: CCCATGACTGTGACGGACCCATAACTGACTTGAATT...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAATTCAAGTCAGTTATaGGTCCGTCACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQENSSQL*VRHSHG
Trigger: CCCATGACTGTGACGGACCCATAACTGACTTGAATT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTACAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALQSHSK*QRLDVI
Trigger: AATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTG...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYSADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGGTCTCTTGATCCAATaGGTTCTGGTCTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKGLLIQ*VLVSLS
Trigger: TGACAGAGAGACCAGAACCCATTGGATCAAGAGACC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCAGCTATAAAACAATCTaGTTCCTCTGTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFSYKTI*FLCFPF
Trigger: AAATGGGAAACAGAGGAACCAGATTGTTTTATAGCT...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAATGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAECNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGAGCAAGTGCAAGGCTaGAAAGTTATTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFEQVQG*KVILQS
Trigger: GGATTGTAAAATAACTTTTCAGCCTTGCACTTGCTC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTTCCGCATTATTTAACTaGCTGGTTCTAAGGATAAGT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPISALFN*LVLRIS
Trigger: ACTTATCCTTAGAACCAGTCAGTTAAATAATGCGGA...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTGAAACTGCCTTTTGTTaGATACAGTCAAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIETAFC*IQSKKT
Trigger: AGTCTTCTTTGACTGTATTCAACAAAAGGCAGTTTC...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTTTCTTATTAGTCACCTaGAGCATTCTGACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GHSALAETCLHNFLSYPIFLLVT*SILTFD
Trigger: ATCAAAGGTCAGAATGCTTCAGGTGACTAATAAGAA...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCAAGTCGGTGCTTATTaGATAAAATGTCCACATATT +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGQVGAY*IKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACAAGTCGGTGCTTATTaGATAAAATGTCCACATATT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQQVGAY*IKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTATTCCATCAAGTCGGTaGTTATTGCATAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLIPSSR*LLHKMS
Trigger: GGACATTTTATGCAATAAGCACCGACTTGATGGAAT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTATTTCTCCCATACACTaGCATATATCTTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIISPIH*HISFQY
Trigger: GTACTGGAAAGATATATGGCAGTGTATGGGAGAAAT...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFTQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGGGAAACCAAATCCTTaGTCTCCTACTCTGCTGATA +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKGKPNP*SPTLLI
Trigger: TATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCATGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPCQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGGGTCACACTGGCACTaGATCTTTTGTTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKGSHWH*IFCCIF
Trigger: AAAGATGCAACAAAAGATGCAGTGCCAGTGTGACCC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAAAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAAAGTGCGTGCCACCATaGCCAGCTAATTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKKCVPP*PANFCS
Trigger: ACTACAAAAATTAGCTGGGCATGGTGGCACGCACTT...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAATTCTATTTTTGCCCTTaGAATTCTGGTCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQFYFCP*NSGQKT
Trigger: AGTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAA...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTCAGCCTCCTAAAGTaGTGGGATTATAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLSLLK*WDYRHS
Trigger: ACTATGCCTATAATCCCAGCACTTTAGGAGGCTGAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCTTTCTTGTCTCAAATaGCTGAATACCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGLSCLK*LNTLKY
Trigger: GTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTTATGTACAAACACTGTaGTTCAAGGTATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFYVQTL*FKVWLP
Trigger: TGGTAGCCATACCTTGAAGCACAGTGTTTGTACATA...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTATTTCTCCCATACACTaGCATATATCTGCTGATTAT +
Preference number: 4 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGISPIH*HISADY
Trigger: ATAATCAGCAGATATATGGCAGTGTATGGGAGAAAT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGAATATATCTGGGAGTaGTGGATAGGTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQEYIWE*WIGLHV
Trigger: GACATGCAGACCTATCCACCACTCCCAGATATATTC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGAATATATCTGGGAGTaGTGGATAGGTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKEYIWE*WIGLHV
Trigger: GACATGCAGACCTATCCACCACTCCCAGATATATTC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGAATATATCTGGGAGTaGTGGATAGGTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPEYIWE*WIGLHV
Trigger: GACATGCAGACCTATCCACCACTCCCAGATATATTC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPQSHSK*QRLDVI
Trigger: AATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTCTGCTGATATGCTCTaGTATTGGCCAGAGTATGGT +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISADML*YWPEYG
Trigger: ACCATACTCTGGCCAATACCAGAGCATATCAGCAGA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGCAAACTCCACCTCCTaGGTTCAAGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQANSTS*VQVFLV
Trigger: AACAAGAAACACTTGAACCCAGGAGGTGGAGTTTGC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAAAGCTATAAAACAATCTaGTTCCTCTGTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQSYKTI*FLCFPF
Trigger: AAATGGGAAACAGAGGAACCAGATTGTTTTATAGCT...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGCTGTGCTTCAAGGTATaGCTACCACAGGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQLCFKV*LPQELS
Trigger: TGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAG...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAGATTCCAAAGAGGTTaGGAACCCAGGATAAAGTGT +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIRFQRG*EPRIKC
Trigger: ACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAGATTCCAAAGAGGTTaGGAACCCAGGATAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKRFQRG*EPRIKC
Trigger: ACACTTTATCCTGGGTTCTCAACCTCTTTGGAATCT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCAAGTCGGTGCTTATTaGATAAAATGTCCACATATT +
Preference number: 4 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIQVGAY*IKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAATTCCATCAAGTCGGTaGTTATTGCATAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALIPSSR*LLHKMS
Trigger: GGACATTTTATGCAATAAGCACCGACTTGATGGAAT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATATAGCACAGAATCATaGCACATACTTCCGTCATGG +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKYSTES*HILPSW
Trigger: CCATGACGGAAGTATGTGGCATGATTCTGTGCTATA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTATAGCACAGAATCATaGCACATACTTCCGTCATGG +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIYSTES*HILPSW
Trigger: CCATGACGGAAGTATGTGGCATGATTCTGTGCTATA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTATAGCACAGAATCATaGCACATACTTCCGTCATGG +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPYSTES*HILPSW
Trigger: CCATGACGGAAGTATGTGGCATGATTCTGTGCTATA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPTQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATGCCAGCCCTACATTTaGATTAATGAGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKCQPYI*INEETN
Trigger: ATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAATCTTTGGTGAAATATaGCAGCCCTACATTTGCATT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALIFGEI*QPYICI
Trigger: AATGCAAATGTAGGGCTGGCATATTTCACCAAAGAT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCACATAAAGAATTCTTaGAGCACAGCCACGAAAGGT +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIHIKNS*STATKG
Trigger: ACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACAAGAGTTATAATCCCTaGAGGTCTCTTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYKSYNP*RSLDPM
Trigger: CATTGGATCAAGAGACCTGCAGGGATTATAACTCTT...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATATGTACAAACACTGTaGTTCAAGGTATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEYVQTL*FKVWLP
Trigger: TGGTAGCCATACCTTGAAGCACAGTGTTTGTACATA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGATATGCTCTGGTATTaGCCAGAGTATGGTAGTACA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIDMLWY*PEYGST
Trigger: TGTACTACCATACTCTGGCCAATACCAGAGCATATC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCTGTCACGTCATCTATaGCCTCTTTCATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFILSRHL*PLSFSS
Trigger: AGAAGAGAATGAAAGAGGCCATAGATGACGTGACAG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 4 (lower is better)
Translates to: LVPANFASPIKYQFPLSLTKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTTGCCCTTGCAATTCTaGTCAGAAAACTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLPLQF*SENYGE
Trigger: CTCTCCATAGTTTTCTGACCAGAATTGCAAGGGCAA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTTGCCCTTGCAATTCTaGTCAGAAAACTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFILPLQF*SENYGE
Trigger: CTCTCCATAGTTTTCTGACCAGAATTGCAAGGGCAA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAGAAATTCCAGCTTCTTaGTGTATATTCGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALEIPAS*CIFGDK
Trigger: TTTGTCACCGAATATACACCAAGAAGCTGGAATTTC...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
3UTR CAA 72 bp AAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTaGTCTCAAATGCCTGAATACCTTAAAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: KKAIGLFYKTAF*SQMPEYLKVLA
Trigger: TGCCAGTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAACCTACTGGAAATCAATaGAAATTCCTCAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKPTGNQ*KFLNQQ
Trigger: TTGCTGGTTGAGGAATTTTCATTGATTTCCAGTAGG...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR TCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGAGCAAGTGCAAGGCTaGAAAGTTATTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIEQVQG*KVILQS
Trigger: GGATTGTAAAATAACTTTTCAGCCTTGCACTTGCTC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGAGCAAGTGCAAGGCTaGAAAGTTATTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKEQVQG*KVILQS
Trigger: GGATTGTAAAATAACTTTTCAGCCTTGCACTTGCTC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCATTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTCAAGTCGGTGCTTATTaGATAAAATGTCCACATATT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFQVGAY*IKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTG...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGACCCAGGATAAAGTGTaGAAGAAATTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKTQDKV*KKFQLL
Trigger: AAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTTTTACAATCCCCATTaGAGTCTGTTGTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQFYNPH*SLLLGL
Trigger: GAGACCTAACAACAGACTGCAATGGGGATTGTAAAA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATTCTATTTTTGCCCTTaGAATTCTGGTCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: RNTKMMFTADPNWGHSALFYFCP*NSGQKT
Trigger: AGTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTTTCTATTTTTGCCCTTaGAATTCTGGTCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFFYFCP*NSGQKT
Trigger: AGTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAA...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATATGTACAAACACTGTaGTTCAAGGTATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKYVQTL*FKVWLP
Trigger: TGGTAGCCATACCTTGAAGCACAGTGTTTGTACATA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCAGGCACTCGCTCATaGACTATAACCATAATGAAA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSGTRS*TITIMK
Trigger: TTTCATTATGGTTATAGTCCATGAGCGAGTGCCTGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTCAGGCACTCGCTCATaGACTATAACCATAATGAAA +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSGTRS*TITIMK
Trigger: TTTCATTATGGTTATAGTCCATGAGCGAGTGCCTGA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 4 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFTKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAATCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 4 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQESNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGAAATTCCAGCTTCTTaGTGTATATTCGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPEIPAS*CIFGDK
Trigger: TTTGTCACCGAATATACACCAAGAAGCTGGAATTTC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTATATCCAAGTATGTCTaGGACTGTTTACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPISKYV*DCLLPT
Trigger: TGTTGGAAGTAAACAGTCTCAGACATACTTGGATAT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGTGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKCNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTGCAACTTCTTTACATaGGATGTTGGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPCNFFT*DVGILF
Trigger: GAACAAAATGCCAACATCTCATGTAAAGAAGTTGCA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTTCTCAAAACATATATaGGCAAGTGCAAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPFSKHI*ASARLK
Trigger: TTTCAGCCTTGCACTTGCTCATATATGTTTTGAGAA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTCCGCATTATTTAACTaGCTGGTTCTAAGGATAAGT +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSALFN*LVLRIS
Trigger: ACTTATCCTTAGAACCAGTCAGTTAAATAATGCGGA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATCCGCATTATTTAACTaGCTGGTTCTAAGGATAAGT +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKSALFN*LVLRIS
Trigger: ACTTATCCTTAGAACCAGTCAGTTAAATAATGCGGA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR TCA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAATTCTTATTAGTCACCTaGAGCATTCTGACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKFLLVT*SILTFD
Trigger: ATCAAAGGTCAGAATGCTTCAGGTGACTAATAAGAA...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTCAATATGTATTTTCTaGAATTTTCGGACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYSICIF*NFRTES
Trigger: GCTCTCAGTCCGAAAATTGCAGAAAATACATATTGA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTATTTCTCCCATACACTaGCATATATCTTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPISPIH*HISFQY
Trigger: GTACTGGAAAGATATATGGCAGTGTATGGGAGAAAT...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGATTTCTCCCATACACTaGCATATATCTTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQISPIH*HISFQY
Trigger: GTACTGGAAAGATATATGGCAGTGTATGGGAGAAAT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGAGAAAACAATTCTTTaGATGCATACCTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKEKTIL*MHTSLL
Trigger: AAGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAAAGTTGAATTGCCTTaGAGCATTTCTCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKKVELP*SISQVR
Trigger: TCTCACTTGAGAAATGCTGCAAGGCAATTCAACTTT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACCTTTCTTGTCTCAAATaGCTGAATACCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: NYFVITANLPPSKPLTLYLSCLK*LNTLKY
Trigger: GTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAG...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAATCAAACCACTCTAACTaGCATAGGAAACATCCTTTA +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKSNHSN*HRKHPL
Trigger: TAAAGGATGTTTCCTATGCCAGTTAGAGTGGTTTGA...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR CCA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAAGCTATAAAACAATCTaGTTCCTCTGTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPSYKTI*FLCFPF
Trigger: AAATGGGAAACAGAGGAACCAGATTGTTTTATAGCT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
3UTR CAA 72 bp GAAACAAAGATTAGTCCAAAGAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETKISPKNKYCH*LGFLLLKVIRS
Trigger: GCTCCTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGACTAATCTTTGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCAAGTCGGTGCTTATTaGATAAAATGTCCACATATT +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPQVGAY*IKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAATCAATATGTATTTTCTaGAATTTTCGGACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKSICIF*NFRTES
Trigger: GCTCTCAGTCCGAAAATTGCAGAAAATACATATTGA...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR GCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCTCAATATGTATTTTCTaGAATTTTCGGACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISICIF*NFRTES
Trigger: GCTCTCAGTCCGAAAATTGCAGAAAATACATATTGA...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGCTTTCTTGTCTCAAATaGCTGAATACCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKLSCLK*LNTLKY
Trigger: GTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAG...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR GCA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTCTTTCTTGTCTCAAATaGCTGAATACCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPLSCLK*LNTLKY
Trigger: GTACTTTAAGGTATTCAGGCATTTGAGACAAGAAAG...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CCA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAAACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 4 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKTKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR CCA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCACAAAGAAGTTATTCTaGGTACCTATACCACTAACA +
Preference number: 4 (lower is better)
Translates to: KTILCMHTSLLNGIKNFITKKLF*VPIPLT
Trigger: TGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS TCA 90 bp AGCCACACAGCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCTCCGCGGTCCGA +
Preference number: 5 (lower is better)
Translates to: SHTATCLVVQRRMQS*LGPAISSSAASAVR
Trigger: TCGGACCGCGGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS TCA 90 bp AGCCACACAGCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SHTATCLVVQRRMQS*LGPAISSSAALGSR
Trigger: CCTGCTGCCAAGGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS TCA 90 bp AGCCACACAGCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCTCTTCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: SHTATCLVVQRRMQS*LGPAISSSAASSGR
Trigger: TCTACCTGAAGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS CCA 90 bp CTGCCCAGCTTTCCCTTTCTTTCCAGTACACTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCACAAACATGGTAAAGCAGCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LPSFPFLSSTLQVLS*HGEGGHKHGKAAKQ
Trigger: TTGCTTCGCTGCTTTACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACTGGAAAGAAAGGGAAAGCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVASTLQV*SWHGEG
Trigger: TCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS TCA 90 bp TCACAGTCATGGGAAAGCTCCCCATTACAGAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGGGTCATGGAACCCATGGGACTGTCA +
Preference number: 5 (lower is better)
Translates to: SQSWESSPLQSQSVL*RALMKGVMEPMGLS
Trigger: TGACAGTCCCATGGGTTCCATGACCCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCTCTGTAATGGGGAGCTTTCCCATGACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 90 bp CCTCCGCTGCCTCTTCAGGTAGACTCCCATCTTCATGGAGGTTTATaGAACCAACGGTCTTCAATCCCAAACAGATACCAAGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPLPLQVDSHLHGGL*NQRSSIPNRYQAER
Trigger: CCTCTCTGCTTGGTATCTGTTTGGGATTGAAGACCGTTGGTTCCATAAACCTCCATGAAGATGGGAGTCTACCTGAAGAGGCAGCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTCACACAGCTACATGCTaGGTAGTCCAGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTHTATC*VVQRRM
Trigger: CATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTG...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 90 bp CCATACACTGCCATATATCTTTCCAGTACACTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCACAAACATGGTAAAGCAGCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: PYTAIYLSSTLQVLS*HGEGGHKHGKAAKQ
Trigger: TTGCTTCGCTGCTTTACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACTGGAAAGATATATGGCAGTGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS CCA 90 bp GCCATTTCCTCCTCCGCTGCCTCTTCAGGTAGACTCCCATCTTCATaGAGGTTTATGGAACCAACGGTCTTCAATCCCAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: AISSSAASSGRLPSS*RFMEPTVFNPKQIP
Trigger: TGGTATCTGTTTGGGATTGAAGACCGTTGGTTCCATAAACCTCCATGAAGATGGGAGTCTACCTGAAGAGGCAGCGGAGGAGGAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS-3UTR CAA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCACACAGCTACATGCTaGGTAGTCCAGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: ICQPYICINEETNGILASHTATC*VVQRRM
Trigger: CATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGGCCTTCGCAGAAGTATaGACCTGTGCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSKNTQAETGHETPLLTEAFAEV*TCACEE
Trigger: TTCTTCACAAGCACAGGTCAATACTTCTGCGAAGGC...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGTGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LSKNTQAETGHETPLLTEWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ICQPYICINEETNGILASLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: ICQPYICINEETNGILASAANAE*IRTCHF
Trigger: GAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGC...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCCACACAGCTACATGCTaGGTAGTCCAGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFHTATC*VVQRRM
Trigger: CATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTG...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACAATCCCCATTGCAGTCTGTTGTTAGGTCTCTCAATGTCAATAGCTCTGCAACCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: YNPHCSLLLGLSMSIALQPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...TTGCAGAGCTATTGACATTGAGAGACCTAACAACAGACTGCAATGGGGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAMSPKT*ISRGGD
Trigger: GTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACAT...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLSTLQV*SWHGEG
Trigger: TCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACT...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTTGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGTTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSKNTQAETGHETPLLTELPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAACTCCACCTCCTGGGTTCAAGTGTTTCTTGTTCCTCAGTCTCCCAAGTAGCTCCACATAAAGAATTCTaGCAGCACAGCCACGAAAGG +
Preference number: 5 (lower is better)
Translates to: KLHLLGSSVSCSSVSQVAPHKEF*QHSHER
Trigger: CCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGG...AGCTACTTGGGAGACTGAGGAACAAGAAACACTTGAACCCAGGAGGTGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS CCA 90 bp CACATGTGTGAACGCCAGTCAGGGTCATACCAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATTTCTCCCATACACTGCCATATATCT +
Preference number: 5 (lower is better)
Translates to: HMCERQSGSYQSHSK*QRLDVISPIHCHIS
Trigger: AGATATATGGCAGTGTATGGGAGAAATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTGGTATGACCCTGACTGGCGTTCACACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNAANAE*IRTCHF
Trigger: GAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGC...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACACACAGCTACATGCTaGGTAGTCCAGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEHTATC*VVQRRM
Trigger: CATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFSTLQV*SWHGEG
Trigger: TCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTCCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTCCCCATTGCAGTCTGTaGTTAGGTCTCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: ICQPYICINEETNGILASPHCSL*LGLSMS
Trigger: TGACATTGAGAGACCTAACAACAGACTGCAATGGGG...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTTAGTAAAAACACACAGGCAGAGACAGGGCACGAAACACCGCTGCTCACAGAGCTAGAAGTTCTATTTTaGCCCTTGCAATTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LSKNTQAETGHETPLLTELEVLF*PLQFWS
Trigger: TGACCAGAATTGCAAGGGCAAAAATAGAACTTCTAG...CTCTGTGAGCAGCGGTGTTTCGTGCCCTGTCTCTGCCTGTGTGTTTTTACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLAANAE*IRTCHF
Trigger: GAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGC...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAAGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEAANAE*IRTCHF
Trigger: GAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGC...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAAGATTCCAAAGAGGTaGAGAACCCAGGATAAAGTG +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTKIPKR*RTQDKV
Trigger: CACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTTTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTLPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTATTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RNTKMMFTADPNWGHSALLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTAACATAACCTCCAGTTaGCATCCCCAAACCAAAAAC +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTNITSS*HPQTKN
Trigger: GTTTTTGGTTTGGGGATGCAAACTGGAGGTTATGTT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFISTLQV*SWHGEG
Trigger: TCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTCACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp ATATGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTTTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: ICQPYICINEETNGILASLPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...ACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAACCTGGGACTATAGCCTaGCACCACTGCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKPGTIA*HHCTRL
Trigger: AAGCCGAGTGCAGTGGTGCAAGGCTATAGTCCCAGG...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCATTAAGAGAATGGGTCTaGCTACCTTGCCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPLREWV*LPCPGW
Trigger: CCAGCCCGGGCAAGGTAGCAAGACCCATTCTCTTAA...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CAAACACTGTGCTTCAAGGTATGGCTACCACAGGAACTTTCACATCTTCAAGTACCCCATTGCAGTCTGTaGTTAGGTCTCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: QTLCFKVWLPQELSHLQVPHCSL*LGLSMS
Trigger: TGACATTGAGAGACCTAACAACAGACTGCAATGGGG...TACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TGCCAGCCCTACATTTGCATTAATGAGGAGACCAATGGCATCCTAGCCAGTACTATTTTACAATCCCCATaGCAGTCTGTTGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: CQPYICINEETNGILASTILQSP*QSVVRS
Trigger: AGACCTAACAACAGACTGCAATGGGGATTGTAAAAT...AGTACTGGCTAGGATGCCATTGGTCTCCTCATTAATGCAAATGTAGGGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCACACAGCTACATGCTaGGTAGTCCAGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIHTATC*VVQRRM
Trigger: CATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: GHSALAETCLHNFLSYPIMSPKT*ISRGGD
Trigger: GTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACAT...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTGCCTTCGCAGAAGTATaGACCTGTGCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIAFAEV*TCACEE
Trigger: TTCTTCACAAGCACAGGTCAATACTTCTGCGAAGGC...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAATGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAEWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GHSALAETCLHNFLSYPIGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCCCCATTGCAGTCTGTaGTTAGGTCTCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLPHCSL*LGLSMS
Trigger: TGACATTGAGAGACCTAACAACAGACTGCAATGGGG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCCCCATTGCAGTCTGTaGTTAGGTCTCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCIPHCSL*LGLSMS
Trigger: TGACATTGAGAGACCTAACAACAGACTGCAATGGGG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCAACATAACCTCCAGTTaGCATCCCCAAACCAAAAAC +
Preference number: 5 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFNITSS*HPQTKN
Trigger: GTTTTTGGTTTGGGGATGCAAACTGGAGGTTATGTT...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKAANAE*IRTCHF
Trigger: GAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: RNTKMMFTADPNWGHSALMSPKT*ISRGGD
Trigger: GTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACAT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGCACAGCAGACCCAAATaGGGGTCATTCAGCACTAGC +
Preference number: 5 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQHSRPK*GSFSTS
Trigger: GCTAGTGCTGAATGACCCCAATTTGGGTCTGCTGTG...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS TCA 90 bp CCAGAGGAGGAGACCGGAGATCATATTCAGTCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCTTATTGCATAAAATGTCCACATATT +
Preference number: 5 (lower is better)
Translates to: PEEETGDHIQSMLAM*FHQVGAYCIKCPHI
Trigger: AATATGTGGACATTTTATGCAATAAGCACCGACTTGATGGAATCACATTGCTAACATTGACTGAATATGATCTCCGGTCTCCTCCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATGGAGAGGATAGCCACATAAAGAATTCTTGCAGCACAGCCACGAAAGGTTTCTCAAGTCGGTGCTTATaGCATAAAATGTCCACATAT +
Preference number: 5 (lower is better)
Translates to: YGEDSHIKNSCSTATKGFSSRCL*HKMSTY
Trigger: ATATGTGGACATTTTATGCAATAAGCACCGACTTGA...GAAACCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGGCTATCCTCTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEMSPKT*ISRGGD
Trigger: GTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACAT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGCCTTCGCAGAAGTATaGACCTGTGCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPAFAEV*TCACEE
Trigger: TTCTTCACAAGCACAGGTCAATACTTCTGCGAAGGC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCATGGGAAACCAAATCCTaGCTCTCCTACTCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPWETKS*LSYSAD
Trigger: ATCAGCAGAGTAGGAGAGCAAGGATTTGGTTTCCCA...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAGATCATTTTAAAGCTACATTCCTTCCAATGCTTCTCAGTCACGTTTCTCAGGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KDHFKATFLPMLLSHVSQGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...CTGAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAGCTTTAAAATGATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCACCCCATTGCAGTCTGTaGTTAGGTCTCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPPHCSL*LGLSMS
Trigger: TGACATTGAGAGACCTAACAACAGACTGCAATGGGG...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTATTTTACAATCCCCATaGCAGTCTGTTGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGILQSP*QSVVRS
Trigger: AGACCTAACAACAGACTGCAATGGGGATTGTAAAAT...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACCCACATAAAGAATTCTaGCAGCACAGCCACGAAAGG +
Preference number: 5 (lower is better)
Translates to: NYFVITANLPPSKPLTLYPHKEF*QHSHER
Trigger: CCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGG...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACTCAAGTCGGTGCTTATaGCATAAAATGTCCACATAT +
Preference number: 5 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNSSRCL*HKMSTY
Trigger: ATATGTGGACATTTTATGCAATAAGCACCGACTTGA...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CAA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAAATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKMSPKT*ISRGGD
Trigger: GTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACAT...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR CAA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGGCCTTCGCAGAAGTATaGACCTGTGCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKAFAEV*TCACEE
Trigger: TTCTTCACAAGCACAGGTCAATACTTCTGCGAAGGC...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCGCCTTCGCAGAAGTATaGACCTGTGCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIAFAEV*TCACEE
Trigger: TTCTTCACAAGCACAGGTCAATACTTCTGCGAAGGC...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAELAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TATTCGGTGACAAAGAAATTCAGCATAGTTAGGACGACTGTGTGGCCACTAAACAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: YSVTKKFSIVRTTVWPLNSIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...GTTTAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACCGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGGGTTCAAGTGTTTCTaGTTCCTCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKGFKCF*FLSLPS
Trigger: ACTTGGGAGACTGAGGAACAAGAAACACTTGAACCC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GATGGTTCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTCAAACCAAAAACCTTTaGGTTCCTTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: DGSEGKNSLSVKQIMSQGQTKNL*VPSLLK
Trigger: CTTTAGTAAGGAAGGAACCAAAAGGTTTTTGGTTTG...ACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAACCACATAAAGAATTCTaGCAGCACAGCCACGAAAGG +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKPHKEF*QHSHER
Trigger: CCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGG...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGCCACATAAAGAATTCTaGCAGCACAGCCACGAAAGG +
Preference number: 5 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKPHKEF*QHSHER
Trigger: CCTTTCGTGGCTGTGCTGCAAGAATTCTTTATGTGG...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TACCATAGTGTTCTTTCTCCTGCCATATCAGGCACAAACTTTCCTTATGCTGAACTAGAAGTTCTATTTTaGCCCTTGCAATTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: YHSVLSPAISGTNFPYAELEVLF*PLQFWS
Trigger: TGACCAGAATTGCAAGGGCAAAAATAGAACTTCTAG...TTCAGCATAAGGAAAGTTTGTGCCTGATATGGCAGGAGAAAGAACACTATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TCAGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTCTAGAAGTTCTATTTTaGCCCTTGCAATTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SEGKNSLSVKQIMSQGCILEVLF*PLQFWS
Trigger: TGACCAGAATTGCAAGGGCAAAAATAGAACTTCTAG...AATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAGATCATTTTAAAGCTACATTCCTTCCAATGCTTCTCAGTCACGTTTCTCAGAAGATTCCAAAGAGGTaGAGAACCCAGGATAAAGTG +
Preference number: 5 (lower is better)
Translates to: KDHFKATFLPMLLSHVSQKIPKR*RTQDKV
Trigger: CACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT...CTGAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAGCTTTAAAATGATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAAAGATTCCAAAGAGGTaGAGAACCCAGGATAAAGTG +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPKIPKR*RTQDKV
Trigger: CACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp GGTCATTCAGCACTAGCTGAGACTTGTTTGCATAATTTCCTTTCCTACCCAATTAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: GHSALAETCLHNFLSYPINKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...AATTGGGTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAGTGCTGAATGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCAGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: RNTKMMFTADPNWGHSALLAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LVPANFASPIKYQFPLSLSIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AACTATAGCACAAAGAAGTTATTCTGGGTACCTATACCACTAACATTAAGCCCATTGCCATACAGTTTTTaGAACCCTTTCCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: NYSTKKLFWVPIPLTLSPLPYSF*NPFPKA
Trigger: GGCTTTTGGGAAAGGGTTCAAAAAACTGTATGGCAA...TGGGCTTAATGTTAGTGGTATAGGTACCCAGAATAACTTCTTTGTGCTATAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTATTTTACAATCCCCATaGCAGTCTGTTGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFILQSP*QSVVRS
Trigger: AGACCTAACAACAGACTGCAATGGGGATTGTAAAAT...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTCAAACCAAAAACCTTTaGGTTCCTTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: LLSTTLQLPFNNTTLPGLQTKNL*VPSLLK
Trigger: CTTTAGTAAGGAAGGAACCAAAAGGTTTTTGGTTTG...AAGACCAGGTAGGGTAGTGTTATTGAAGGGTAATTGAAGAGTGGTAGAGAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTAGTCCCAGCTAATTTTGCTTCCCCCATTAAGTACCAGTTTCCACTTTCTTTGCAAACCAAAAACCTTTaGGTTCCTTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: LVPANFASPIKYQFPLSLQTKNL*VPSLLK
Trigger: CTTTAGTAAGGAAGGAACCAAAAGGTTTTTGGTTTG...CAAAGAAAGTGGAAACTGGTACTTAATGGGGGAAGCAAAATTAGCTGGGACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTTACAAGACAGCTTTCTaGTCTCAAATGCCTGAATAC +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFYKTAF*SQMPEY
Trigger: GTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTA...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AGAAGGCAAAAACTCTTTGTCAGTAAAACAGATCATGTCCCAGGGTTGCATTTTTCAAGTCGGTGCTTATaGCATAAAATGTCCACATAT +
Preference number: 5 (lower is better)
Translates to: RRQKLFVSKTDHVPGLHFSSRCL*HKMSTY
Trigger: ATATGTGGACATTTTATGCAATAAGCACCGACTTGA...AAAATGCAACCCTGGGACATGATCTGTTTTACTGACAAAGAGTTTTTGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAAGATTCCAAAGAGGTaGAGAACCCAGGATAAAGTG +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFIKIPKR*RTQDKV
Trigger: CACTTTATCCTGGGTTCTCAACCTCTTTGGAATCTT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGGGAGAAAACAATTCTTaGCATGCATACCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQGENNS*HAYLPT
Trigger: AGTAGGGAGGTATGCATGCAAAGAATTGTTTTCTCC...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAGATCATTTTAAAGCTACATTCCTTCCAATGCTTCTCAGTCACGTTTCTCAGCTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: KDHFKATFLPMLLSHVSQLAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...CTGAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAGCTTTAAAATGATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CAA 90 bp AGAAATACAAAAATGATGTTCACAGCAGACCCAAATTGGGGTCATTCAGCACTAAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RNTKMMFTADPNWGHSALSIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...TAGTGCTGAATGACCCCAATTTGGGTCTGCTGTGAACATCATTTTTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAACATAACCTCCAGTTaGCATCCCCAAACCAAAAAC +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFINITSS*HPQTKN
Trigger: GTTTTTGGTTTGGGGATGCAAACTGGAGGTTATGTT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAGTTCTATTTTTGCCCTaGCAATTCTGGTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQEVLFLP*QFWSEN
Trigger: GTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAAC...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACTACAAGACAGCTTTCTaGTCTCAAATGCCTGAATAC +
Preference number: 5 (lower is better)
Translates to: NYFVITANLPPSKPLTLYYKTAF*SQMPEY
Trigger: GTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTA...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAGATCATTTTAAAGCTACATTCCTTCCAATGCTTCTCAGTCACGTTTCTCAGTCAAGTCGGTGCTTATaGCATAAAATGTCCACATAT +
Preference number: 5 (lower is better)
Translates to: KDHFKATFLPMLLSHVSQSSRCL*HKMSTY
Trigger: ATATGTGGACATTTTATGCAATAAGCACCGACTTGA...CTGAGAAACGTGACTGAGAAGCATTGGAAGGAATGTAGCTTTAAAATGATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CAA 90 bp TCCAAAGAACAAGTACTGTCACTTGTTAGGGTTTCTTCTTCTAAAGGTAATAAGAGAAATTCCAGCTTCTaGGTGTATCTAGGAAAAGGA +
Preference number: 5 (lower is better)
Translates to: SKEQVLSLVRVSSSKGNKRNSSF*VYLGKG
Trigger: TCCTTTTCCTAGATACACCAAGAAGCTGGAATTTCT...CTTATTACCTTTAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS-3UTR CAA 90 bp AAGATATTTACTTATGTACAAACACTGTGCTTCAAGGTATGGCTACCACAGGAAAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: KIFTYVQTLCFKVWLPQENKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...TTCCTGTGGTAGCCATACCTTGAAGCACAGTGTTTGTACATAAGTAAATATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAACTAGCTGAGACTTGTTaGCATAATTTCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKLAETC*HNFLSY
Trigger: GTAGGAAAGGAAATTATGCAAACAAGTCTCAGCTAG...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp CTCTGGTATTGGCCAGAGTATGGTAGTACAAAAAGAGTCTTGTTGTTATATAAAATTTTACAATCCCCATaGCAGTCTGTTGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: LWYWPEYGSTKRVLLLYKILQSP*QSVVRS
Trigger: AGACCTAACAACAGACTGCAATGGGGATTGTAAAAT...TTTATATAACAACAAGACTCTTTTTGTACTACCATACTCTGGCCAATACCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372687.4
ENST00000649316.2
CDS-3UTR CAA 90 bp AATTATTTTGTGATAACAGCAAACCTGCCTCCTTCAAAACCTCTTACTCTCTACCAAACCAAAAACCTTTaGGTTCCTTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: NYFVITANLPPSKPLTLYQTKNL*VPSLLK
Trigger: CTTTAGTAAGGAAGGAACCAAAAGGTTTTTGGTTTG...GTAGAGAGTAAGAGGTTTTGAAGGAGGCAGGTTTGCTGTTATCACAAAATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAGTTCTATTTTTGCCCTaGCAATTCTGGTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKVLFLP*QFWSEN
Trigger: GTTTTCTGACCAGAATTGCAAGGGCAAAAATAGAAC...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCCTAGAAGTTCTATTTTaGCCCTTGCAATTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFILEVLF*PLQFWS
Trigger: TGACCAGAATTGCAAGGGCAAAAATAGAACTTCTAG...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGTACAAGACAGCTTTCTaGTCTCAAATGCCTGAATAC +
Preference number: 5 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQYKTAF*SQMPEY
Trigger: GTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTA...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTACAAGACAGCTTTCTaGTCTCAAATGCCTGAATAC +
Preference number: 5 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPYKTAF*SQMPEY
Trigger: GTATTCAGGCATTTGAGACAAGAAAGCTGTCTTGTA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTAAGAAAGCAATTGGACTATTCTACAAGACAGCTTTCTTGTCTCAAATGCCTTCAAGTCGGTGCTTATaGCATAAAATGTCCACATAT +
Preference number: 5 (lower is better)
Translates to: FKKAIGLFYKTAFLSQMPSSRCL*HKMSTY
Trigger: ATATGTGGACATTTTATGCAATAAGCACCGACTTGA...AGGCATTTGAGACAAGAAAGCTGTCTTGTAGAATAGTCCAATTGCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQNKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp AAAACAATTCTTTGCATGCATACCTCCCTACTTAACGGCATTAAGAACTTTATCAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: KTILCMHTSLLNGIKNFINKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...GATAAAGTTCTTAATGCCGTTAAGTAGGGAGGTATGCATGCAAAGAATTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAAACAAGTACTGTCACTaGTTAGGGTTTCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKNKYCH*LGFLLL
Trigger: TAGAAGAAGAAACCCTAACAAGTGACAGTACTTGTT...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTACAAATTACAGGATTTCTGGAATTCTTAGTAAAAACACACAGGCAGAGACAGAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LQITGFLEFLVKTHRQRQSIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...CTGTCTCTGCCTGTGTGTTTTTACTAAGAATTCCAGAAATCCTGTAATTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS-3UTR CAA 90 bp TTTGATGTTACTAACAATTCTCCTCTACAGCAGTATGGGATAATTCAGGCTAAAAGCATAAAAGTTGAATaGCCTTGCAGCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: FDVTNNSPLQQYGIIQAKSIKVE*PCSISQ
Trigger: TTGAGAAATGCTGCAAGGCAATTCAACTTTTATGCT...TTTAGCCTGAATTATCCCATACTGCTGTAGAGGAGAATTGTTAGTAACATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS GCA 72 bp GGTAGTCCAGCGGCGAATGCAGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGCCCTTGGCAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GSPAANAELIRT*HFLLRCPWQQA
Trigger: CGCCTGCTGCCAAGGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS GCA 72 bp GGTAGTCCAGCGGCGAATGCAGAGTTGATTAGGACCTaGCATTTCCTCCTCCGCTGCCTCCGCGGTCCGAGT +
Preference number: 6 (lower is better)
Translates to: GSPAANAELIRT*HFLLRCLRGPS
Trigger: ACTCGGACCGCGGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CAA 90 bp CAGCCACACAGCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTCCTCCTCCGCTGCCTCCGCGGTCCG +
Preference number: 6 (lower is better)
Translates to: QPHSYMLGSPAANAE*IRTCHFLLRCLRGP
Trigger: CGGACCGCGGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CAA 90 bp CAGCCACACAGCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTaGATTAGGACCTGCCATTTCCTCCTCCGCTGCCCTTGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QPHSYMLGSPAANAE*IRTCHFLLRCPWQQ
Trigger: CTGCTGCCAAGGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS TCA 72 bp GCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: ATCLVVQRRMQS*LGPAISSSAAS
Trigger: GGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS TCA 72 bp GCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: ATCLVVQRRMQS*LGPAISSSAAL
Trigger: AAGGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372687.4
CDS TCA 72 bp GCTACATGCTTGGTAGTCCAGCGGCGAATGCAGAGTTaGTTAGGACCTGCCATTTCCTCCTCCGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: ATCLVVQRRMQS*LGPAISSSAAS
Trigger: AGAGGCAGCGGAGGAGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS CAA 72 bp CCCAGCTTTCCCTTTCTTTCCAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGAGGTCACAAACATGGT +
Preference number: 6 (lower is better)
Translates to: PSFPFLSSTLQV*SWHGEGGHKHG
Trigger: ACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACTGGAAAGAAAGGGAAAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS TCA 72 bp TGGGAAAGCTCCCCATTACAGAGCCAGTCTGTACTCTaGAGAGCACTGATGAAAGGGGTCATGGAACCCATG +
Preference number: 6 (lower is better)
Translates to: WESSPLQSQSVL*RALMKGVMEPM
Trigger: CATGGGTTCCATGACCCCTTTCATCAGTGCTCTTCAGAGTACAGACTGGCTCTGTAATGGGGAGCTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 72 bp GCCATATATCTTTCCAGTACACTGCAGGTGTTGTCCTaGCACGGAGAGGGAGGTCACAAACATGGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: AIYLSSTLQVLS*HGEGGHKHGKA
Trigger: TGCTTTACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACTGGAAAGATATATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS CCA 72 bp GAACGCCAGTCAGGGTCATACCAAAGCCACTCCAAATaGCAAAGGCTCGATGTAATTTCTCCCATACACTGC +
Preference number: 6 (lower is better)
Translates to: ERQSGSYQSHSK*QRLDVISPIHC
Trigger: GCAGTGTATGGGAGAAATTACATCGAGCCTTTGCCATTTGGAGTGGCTTTGGTATGACCCTGACTGGCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 72 bp TCCTCCGCTGCCTCTTCAGGTAGACTCCCATCTTCATaGAGGTTTATGGAACCAACGGTCTTCAATCCCAAA +
Preference number: 6 (lower is better)
Translates to: SSAASSGRLPSS*RFMEPTVFNPK
Trigger: TTTGGGATTGAAGACCGTTGGTTCCATAAACCTCCATGAAGATGGGAGTCTACCTGAAGAGGCAGCGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS CAA 72 bp TACACTGCCATATATCTTTCCAGTACACTGCAGGTGTaGTCCTGGCACGGAGAGGGAGGTCACAAACATGGT +
Preference number: 6 (lower is better)
Translates to: YTAIYLSSTLQV*SWHGEGGHKHG
Trigger: ACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAACACCTGCAGTGTACTGGAAAGATATATGGCAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372687.4
ENST00000542569.6
ENST00000671730.1
ENST00000671800.1
CDS GCA 72 bp GAAGAAGAACCAGGAGCCAAATATAGCACAGAATCATaGCACATACTTCCGTCATGGCAAAGGCCCATGGGA +
Preference number: 6 (lower is better)
Translates to: EEEPGAKYSTES*HILPSWQRPMG
Trigger: TCCCATGGGCCTTTGCCATGACGGAAGTATGTGGCATGATTCTGTGCTATATTTGGCTCCTGGTTCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 72 bp TCAGAATTCAAGTCAGTTATGGGTCCGTCACAGTCATaGGAAAGCTCCCCATTACAGAGCCAGTCTGTACTC +
Preference number: 6 (lower is better)
Translates to: SEFKSVMGPSQS*ESSPLQSQSVL
Trigger: GAGTACAGACTGGCTCTGTAATGGGGAGCTTTCCCATGACTGTGACGGACCCATAACTGACTTGAATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS GCA 72 bp CTCCCATACACTGCCATATATCTGCTGATTATACACTaGCCAGCTTTCCCTTTCTTTCCAGTACACTGCAGG +
Preference number: 6 (lower is better)
Translates to: LPYTAIYLLIIH*PAFPFFPVHCR
Trigger: CCTGCAGTGTACTGGAAAGAAAGGGAAAGCTGGGCAGTGTATAATCAGCAGATATATGGCAGTGTATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649316.2
CDS CCA 72 bp CCTCTTCAGGTAGACTCCCATCTTCATGGAGGTTTATaGAACCAACGGTCTTCAATCCCAAACAGATACCAA +
Preference number: 6 (lower is better)
Translates to: PLQVDSHLHGGL*NQRSSIPNRYQ
Trigger: TTGGTATCTGTTTGGGATTGAAGACCGTTGGTTCCATAAACCTCCATGAAGATGGGAGTCTACCTGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447533.5
CDS CAA 72 bp ACTGAGAGCATTAACCTTTTAATGTCCCCTAAGACTTaGATTTCCAGAGGAGGAGACCGGAGATCATATTCA +
Preference number: 6 (lower is better)
Translates to: TESINLLMSPKT*ISRGGDRRSYS
Trigger: TGAATATGATCTCCGGTCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACATTAAAAGGTTAATGCTCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS TCA 72 bp GAGACCGGAGATCATATTCAGTCAATGTTAGCAATGTaGTTCCATCAAGTCGGTGCTTATTGCATAAAATGT +
Preference number: 6 (lower is better)
Translates to: ETGDHIQSMLAM*FHQVGAYCIKC
Trigger: ACATTTTATGCAATAAGCACCGACTTGATGGAATCACATTGCTAACATTGACTGAATATGATCTCCGGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1
CDS CCA 72 bp AACATATATACAACTCAGTATAGTCTTCCAGTATTCTaGGTCCAATCTTCGAACAGAATGTTTGTTTTTACC +
Preference number: 6 (lower is better)
Translates to: NIYTTQYSLPVF*VQSSNRMFVFT
Trigger: GGTAAAAACAAACATTCTGTTCGAAGATTGGACCCAGAATACTGGAAGACTATACTGAGTTGTATATATGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372687.4
ENST00000447533.5
ENST00000542569.6
ENST00000649316.2
ENST00000671730.1
ENST00000671800.1