RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000187033

Ensembl transcript IDs: ENST00000335556.7, ENST00000428432.6, ENST00000487910.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTaGAGCCATAGAGGAAGGGTATCCCTAGGCCTGCTAGTCCCTTGG +
Preference number: 1 (lower is better)
Translates to: GACSCHGRQRGQLGH*SHRGRVSLGLLVPW
Trigger: CCAAGGGACTAGCAGGCCTAGGGATACCCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 90 bp GGGTGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTaGCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGA +
Preference number: 1 (lower is better)
Translates to: GCFCENAGHRQGACS*HGRQRGQLGHWSHR
Trigger: TCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR TCA 90 bp TCCTCTTTCCCATCGTCCCAGGCCTTTGCTTTCAGGGTAGTGGTGTaGGACCCCCAGGGTTTCCTATGGGTGGGCTCGAGCTCTCCACAG +
Preference number: 1 (lower is better)
Translates to: SSFPSSQAFAFRVVV*DPQGFLWVGSSSPQ
Trigger: CTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCTGGGGGTCTCACACCACTACCCTGAAAGCAAAGGCCTGGGACGATGGGAAAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 90 bp CCTTCATTAGCATTTGCTCCTAAGGATGCGTCTCCAGTCATTTGGTaGTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTC +
Preference number: 1 (lower is better)
Translates to: PSLAFAPKDASPVIW*WGHSALAGKPLGQV
Trigger: GACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACTGGAGACGCATCCTTAGGAGCAAATGCTAATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CCA 90 bp TCATTAGCATTTGCTCCTAAGGATGCGTCTCCAGTCATTTGGTGCTaGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCC +
Preference number: 1 (lower is better)
Translates to: SLAFAPKDASPVIWC*GHSALAGKPLGQVS
Trigger: GGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACTGGAGACGCATCCTTAGGAGCAAATGCTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR GCA 90 bp AAAAATCTGCTCCGAAGCCTCCTCTTTCCCATCGTCCCAGGCCTTTaGTTTCAGGGTAGTGGTGTGAGACCCCCAGGGTTTCCTATGGGT +
Preference number: 1 (lower is better)
Translates to: KNLLRSLLFPIVPGL*FQGSGVRPPGFPMG
Trigger: ACCCATAGGAAACCCTGGGGGTCTCACACCACTACCCTGAAAGCAAAGGCCTGGGACGATGGGAAAGAGGAGGCTTCGGAGCAGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 90 bp ACCCCCAGGGTTTCCTATGGGTGGGCTCGAGCTCTCCACAGGTGTTaGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCT +
Preference number: 1 (lower is better)
Translates to: TPRVSYGWARALHRC*QELSLAFHSFHLTS
Trigger: AGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 90 bp AGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTaGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGT +
Preference number: 1 (lower is better)
Translates to: SFSPSLAWACFTLEI*NEKRWSRGQLLHFC
Trigger: ACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR GCA 90 bp AGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTaGCCGTTCTCTTCTGCCTCTCTGTGGTTTCATTGGGTTGCCTTT +
Preference number: 1 (lower is better)
Translates to: RDGVVVSFSISVLYF*PFSSASLWFHWVAF
Trigger: AAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGAGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR TCA 90 bp ACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTaGCTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATA +
Preference number: 1 (lower is better)
Translates to: TGVGKSCRWLFIRFT*LLVAGCFNVWVFCI
Trigger: TATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 90 bp GTTCTGTACTTCTGCCCGTTCTCTTCTGCCTCTCTGTGGTTTCATTaGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGT +
Preference number: 1 (lower is better)
Translates to: VLYFCPFSSASLWFH*VAFISFRVWEWKMS
Trigger: ACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGAGAACGGGCAGAAGTACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR GCA 90 bp CAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTT +
Preference number: 1 (lower is better)
Translates to: QELSLAFHSFHLTSG*WVLQCLGLLHNDPL
Trigger: AAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 90 bp GAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: ELSLAFHSFHLTSGC*VLQCLGLLHNDPLH
Trigger: ATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCGGCAGCGGGGGCAGCTaGGACACTGGAGCCATAGAG +
Preference number: 2 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFGSGGS*DTGAIE
Trigger: CTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCC...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CAA 90 bp GACCCCCAGGGTTTCCTATGGGTGGGCTCGAGCTCTCCACAGGTGTaGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTC +
Preference number: 2 (lower is better)
Translates to: DPQGFLWVGSSSPQV*ARAVVGFSFVSLDF
Trigger: GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR GCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCACCGGCAGGGAGCATaGTCCTGCCATGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGHRQGA*SCHGRQ
Trigger: CTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTG...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CAA 90 bp TATGGGTGGGCTCGAGCTCTCCACAGGTGTTGGCAAGAGCTGTCGTaGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: YGWARALHRCWQELS*AFHSFHLTSGCWVL
Trigger: AAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCTCGAGCCCACCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR GCA 90 bp CTGCTTGACTTTTGGAACTCTCAGCATCACTGTCTAGAGCTTTTTGATTCCCTGAGTCGACGACATCTCTaGCCCCAGCTCTCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LLDFWNSQHHCLELFDSLSRRHL*PQLSSK
Trigger: CTTTGAGGAGAGCTGGGGGCAGAGATGTCGTCGACT...CAGGGAATCAAAAAGCTCTAGACAGTGATGCTGAGAGTTCCAAAAGTCAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTCCAGTCATTTGGTGCTaGGGTCATTCAGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSPVIWC*GHSALA
Trigger: TGCCAGGGCTGAATGACCCCAGCACCAAATGACTGG...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CAA 90 bp CACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTaGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: HRCWQELSLAFHSFH*TSGCWVLQCLGLLH
Trigger: ATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR TCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATaGGAAGAGATGGAGTCGTGG +
Preference number: 2 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHAGNLE*EEMESW
Trigger: CCACGACTCCATCTCTTCTCATTCCAGATTTCCAGC...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TGTTCCTGGCAGAGATGGTCGAGGAACTGGAGGGCAAACCCCATTCTTTTCATCGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: CSWQRWSRNWRANPILFIGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...GATGAAAAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATCTTCTGCCTCTCTGTaGTTTCATTGGGTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLESSASL*FHWVAF
Trigger: AAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGA...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCAGTTGCCGCTAGCATaGGGTTTCCCTGAAGGTTTC +
Preference number: 2 (lower is better)
Translates to: LTSGCWVLQCLGLLHNDPQLPLA*GFPEGF
Trigger: GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTG...AGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR TCA 90 bp AGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTCTTATAGGTCCCTGTATTTTTCCTaGGTCGACGACATCTCTGCC +
Preference number: 2 (lower is better)
Translates to: RIQKRGCICWLIKCLSYRSLYFS*VDDISA
Trigger: GGCAGAGATGTCGTCGACTCAGGAAAAATACAGGGA...CCTATAAGACAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGCGTCTCCAGTCATTTaGTGCTGGGGTCATTCAGCC +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEASPVI*CWGHSA
Trigger: GGCTGAATGACCCCAGCACCAAATGACTGGAGACGC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTCTTCTGCCTCTCTGTaGTTTCATTGGGTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHSSASL*FHWVAF
Trigger: AAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGA...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CAA 90 bp TGTTCTGTACTTCTGCCCGTTCTCTTCTGCCTCTCTGTGGTTTCATaGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: CSVLLPVLFCLSVVS*GCLYLFQGLGMENE
Trigger: CTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGAGAACGGGCAGAAGTACAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR TCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTAAGCCCCAGAAAGGCTaGCTTTCTCTTCTCATTCTC +
Preference number: 2 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSKPQKG*LSLLIL
Trigger: GAGAATGAGAAGAGAAAGTCAGCCTTTCTGGGGCTT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp AGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTCTTATAGGTTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: RIQKRGCICWLIKCLSYRLTSGC*VLQCLG
Trigger: ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA...CCTATAAGACAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CAA 90 bp TTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTaGCATAATGATCCTCTTCATAGGGAACTGCATGAGTCTGACCTA +
Preference number: 2 (lower is better)
Translates to: FHLTSGCWVLQCLGL*HNDPLHRELHESDL
Trigger: TAGGTCAGACTCATGCAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR TCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGCTGGAAATCTGGAATaGGAAGAGATGGAGTCGTGG +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEAGNLE*EEMESW
Trigger: CCACGACTCCATCTCTTCTCATTCCAGATTTCCAGC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGGGCCTGCTTCACGCTaGAAATCTGGAATGAGAAGA +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEGPASR*KSGMRR
Trigger: TCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGTGAGCCACCGCGCCTaGCCAAAACTCGAAAATTTA +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEVSHRA*PKLENL
Trigger: TAAATTTTCGAGTTTTGGCCAGGCGCGGTGGCTCAC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp AGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTCTTATAGGGTTTCACTTGACTTCTaGTTGCTGGGTGCTTCAATG +
Preference number: 2 (lower is better)
Translates to: RIQKRGCICWLIKCLSYRVSLDF*LLGASM
Trigger: CATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAAC...CCTATAAGACAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR GCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATATGGAAACATCCATCTaGAGCTTTCTTGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHMETSI*SFLDVC
Trigger: ACAAACATCAAGAAAGCTGCAGATGGATGTTTCCAT...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR GCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTG +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEHLTSG*WVLQCL
Trigger: CAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR GCA 90 bp GCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTAATGTCTGGGTCTTTTaGATAATGATCCTCTTCATA +
Preference number: 2 (lower is better)
Translates to: ARAVVGFSFVSLDFWLLGNVWVF*IMILFI
Trigger: TATGAAGAGGATCATTATGCAAAAGACCCAGACATT...ACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTTCTCCATCCAGTACTaGGAAATCCTCACACATCCT +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEFSIQY*EILTHP
Trigger: AGGATGTGTGAGGATTTCCCAGTACTGGATGGAGAA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR GCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTATGGAAACATCCATCTaGAGCTTTCTTGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSMETSI*SFLDVC
Trigger: ACAAACATCAAGAAAGCTGCAGATGGATGTTTCCAT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
3UTR-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTTCACGCTGGAAATCTaGAATGAGAAGAGATGGAGT +
Preference number: 2 (lower is better)
Translates to: CNILGSLENWLRLFFLLEFTLEI*NEKRWS
Trigger: ACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAACAGTTTCAGCTCTTTTaGTTTCTTCAGAGATTTCTT +
Preference number: 2 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEQFQLF*FLQRFL
Trigger: AAGAAATCTCTGAAGAAACCAAAAGAGCTGAAACTG...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR GCA 72 bp TGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTaGCATGGTAGGCAGCGGGGGCAGCTGGGACACTGG +
Preference number: 3 (lower is better)
Translates to: CENAGHRQGACS*HGRQRGQLGHW
Trigger: CCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 72 bp TGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATaGTCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: CFCENAGHRQGA*SCHGRQRGQLG
Trigger: TCCCAGCTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 72 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTaGAGCCATAGAGGAAGGGTATCCCTAGGCCTGCTA +
Preference number: 3 (lower is better)
Translates to: SCHGRQRGQLGH*SHRGRVSLGLL
Trigger: TAGCAGGCCTAGGGATACCCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 72 bp CTCCGAAGCCTCCTCTTTCCCATCGTCCCAGGCCTTTaGTTTCAGGGTAGTGGTGTGAGACCCCCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: LRSLLFPIVPGL*FQGSGVRPPGF
Trigger: AAACCCTGGGGGTCTCACACCACTACCCTGAAAGCAAAGGCCTGGGACGATGGGAAAGAGGAGGCTTCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 72 bp GCATTTGCTCCTAAGGATGCGTCTCCAGTCATTTGGTaGTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTT +
Preference number: 3 (lower is better)
Translates to: AFAPKDASPVIW*WGHSALAGKPL
Trigger: AAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACTGGAGACGCATCCTTAGGAGCAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CCA 72 bp TTAGCATTTGCTCCTAAGGATGCGTCTCCAGTCATTTaGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LAFAPKDASPVI*CWGHSALAGKP
Trigger: GGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACTGGAGACGCATCCTTAGGAGCAAATGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CCA 72 bp CCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTaGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: PSLAWACFTLEI*NEKRWSRGQLL
Trigger: GAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CAA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 3 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMNILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CCA 72 bp GTTTCCTATGGGTGGGCTCGAGCTCTCCACAGGTGTTaGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VSYGWARALHRC*QELSLAFHSFH
Trigger: GTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCTCGAGCCCACCCATAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 72 bp CAGTGCATGTGTTCCTGGCAGAGATGGTCGAGGAACTaGAGGGCAAACCCCATTCTTTTCATCACAGGTTGC +
Preference number: 3 (lower is better)
Translates to: QCMCSWQRWSRN*RANPILFITGC
Trigger: GCAACCTGTGATGAAAAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACACATGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CAA 90 bp TGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGCAAAGTGTGGTGCAGTaGCCGCTAGCATGGGGTTTC +
Preference number: 3 (lower is better)
Translates to: WQELSLAFHSFHLTSGCWQSVVQ*PLAWGF
Trigger: GAAACCCCATGCTAGCGGCAACTGCACCACACTTTG...CCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR TCA 72 bp CCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATaGGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTT +
Preference number: 3 (lower is better)
Translates to: PSLGLLHAGNLE*EEMESWSASPF
Trigger: AAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CAA 90 bp TCTCCTCAAAGTGTGGTGCAGTTGCCGCTAGCATGGGGTTTCCCTGAAGGTTTCAGCACAGCTAGTTCCTaGCCAGAGATTAATCCTCAA +
Preference number: 3 (lower is better)
Translates to: SPQSVVQLPLAWGFPEGFSTASS*PEINPQ
Trigger: TTGAGGATTAATCTCTGGCAAGGAACTAGCTGTGCT...GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTGCACCACACTTTGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR TCA 72 bp GGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTaGCTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: GKSCRWLFIRFT*LLVAGCFNVWV
Trigger: GACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR CCA 72 bp GCCTGCTTCACGCTGGAAATCTGGAATGAGAAGAGATaGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTA +
Preference number: 3 (lower is better)
Translates to: ACFTLEIWNEKR*SRGQLLHFCSV
Trigger: TACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGCTCTCTGTGGTTTCATaGGGTTGCCTTTATCTCTTT +
Preference number: 3 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKLSVVS*GCLYLF
Trigger: AAAGAGATAAAGGCAACCCAATGAAACCACAGAGAG...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR-3UTR CAA 90 bp TGTTCCTGGCAGAGATGGTCGAGGAACTGGAGGGCAAACCCCATTCTTTTCATCAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 3 (lower is better)
Translates to: CSWQRWSRNWRANPILFINILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...GATGAAAAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CAA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATCCATCTGCAGCTTTCTaGATGTTTGTAAATCTCCCC +
Preference number: 3 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHPSAAF*MFVNLP
Trigger: GGGGAGATTTACAAACATCAAGAAAGCTGCAGATGG...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR GCA 72 bp CTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTaGATAATGATCCTCTTCATAGGGAACTGCATGAGT +
Preference number: 3 (lower is better)
Translates to: LLVAGCFNVWVF*IMILFIGNCMS
Trigger: ACTCATGCAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR GCA 72 bp TCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTGGGTCTTTTGCATAAT +
Preference number: 3 (lower is better)
Translates to: SLAFHSFHLTSG*WVLQCLGLLHN
Trigger: ATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CAA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 3 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSNILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CCA 72 bp TTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGTCTTTTGCATAATGAT +
Preference number: 3 (lower is better)
Translates to: LAFHSFHLTSGC*VLQCLGLLHND
Trigger: ATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTCTTTTCATCACAGGTaGCAAAAATCTGCTCCGAAG +
Preference number: 3 (lower is better)
Translates to: CNILGSLENWLRLFFLLESFHHR*QKSAPK
Trigger: CTTCGGAGCAGATTTTTGCAACCTGTGATGAAAAGA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487910.1
3UTR-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGGATGTATCTGCTGGTaGATCAAATGCTTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: CNILGSLENWLRLFFLLEGCICW*IKCLSY
Trigger: ATAAGACAAGCATTTGATCAACCAGCAGATACATCC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGGGCAGCGGGGGCAGCTaGGACACTGGAGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMGSGGS*DTGAIE
Trigger: CTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCC...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGTTCAGGGTAGTGGTGTaGGACCCCCAGGGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQFRVVV*DPQGFL
Trigger: TAGGAAACCCTGGGGGTCTCACACCACTACCCTGAA...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCAGGGAGCATGCTCCTaGCATGGTAGGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASQGACS*HGRQRG
Trigger: CCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTG...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGAGTCGACGACATCTCTaGCCCCAGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQSRRHL*PQLSSK
Trigger: CTTTGAGGAGAGCTGGGGGCAGAGATGTCGTCGACT...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGCAGTGCATGTGTTCCTaGCAGAGATGGTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQQCMCS*QRWSRN
Trigger: GTTCCTCGACCATCTCTGCCAGGAACACATGCACTG...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCCAGGGAGCATGCTCCTaGCATGGTAGGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLQGACS*HGRQRG
Trigger: CCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTG...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCCCCAGGGTTTCCTATaGGTGGGCTCGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASPQGFL*VGSSSP
Trigger: TGGAGAGCTCGAGCCCACCCATAGGAAACCCTGGGG...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGTTCATTCGTTTCACTTaGCTTCTGGTTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQFIRFT*LLVAGC
Trigger: GCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAA...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCAGCTGGAAATCTGGAATaGGAAGAGATGGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPAGNLE*EEMESW
Trigger: CCACGACTCCATCTCTTCTCATTCCAGATTTCCAGC...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGTCTCCAGTCATTTGGTaGTGGGGTCATTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMSPVIW*WGHSAL
Trigger: CAGGGCTGAATGACCCCAGCACCAAATGACTGGAGA...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGCAGTTGGAGCTACGGTaGAAGGCAATACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQQLELR*KAIHLC
Trigger: ACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTG...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTTTCAGGGTAGTGGTGTaGGACCCCCAGGGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASFRVVV*DPQGFL
Trigger: TAGGAAACCCTGGGGGTCTCACACCACTACCCTGAA...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCAAAGCCCCAGAAAGGCTaGCTTTCTCTTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPKPQKG*LSLLIL
Trigger: GAGAATGAGAAGAGAAAGTCAGCCTTTCTGGGGCTT...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATCTGTTCTGTACTTCTaGCCGTTCTCTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPSVLYF*PFSSAS
Trigger: AGAGGCAGAAGAGAACGGGCAGAAGTACAGAACAGA...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGTGGCCACTGCCTTTATaGATTCAGGTGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQWPLPL*IQVVKC
Trigger: GCATTTTACCACCTGAATCCATAAAGGCAGTGGCCA...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGGGCAGCGGGGGCAGCTaGGACACTGGAGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKGSGGS*DTGAIE
Trigger: CTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCC...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPLTSGC*VLQCLG
Trigger: ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGAGGAAGGTTCCCTGAAGGTTTCTaGGGGTGCTTCTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SCHGRQRGQLGHWSHRGRFPEGF*GCFCEN
Trigger: ATTTTCACAGAAGCACCCTCAGAAACCTTCAGGGAA...CCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAGAAGCTTCTCTGGCTaGGGGTTGAAAGGTACATCT +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMRSFSG*GLKGTS
Trigger: AGATGTACCTTTCAACCCGCAGCCAGAGAAGCTTCT...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TGTTCCTGGCAGAGATGGTCGAGGAACTGGAGGGCAAACCCCATTCTTTTCATCCACCGGCAGGGAGCATaGTCCTGCCATGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSWQRWSRNWRANPILFIHRQGA*SCHGRQ
Trigger: CTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTG...GATGAAAAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTATCGTCCCAGGCCTTTaGTTTCAGGGTAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASIVPGL*FQGSGV
Trigger: CACACCACTACCCTGAAAGCAAAGGCCTGGGACGAT...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGCAGTTGGAGCTACGGTaGAAGGCAATACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMQLELR*KAIHLC
Trigger: ACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTG...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCGGCAGGGAAGCCCCTTaGGCAAGTCTCCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLGREAP*ASLLHE
Trigger: TTCATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCC...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTTCCCTGTATTTTTCCTaGGTCGACGACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASSLYFS*VDDISA
Trigger: GGCAGAGATGTCGTCGACTCAGGAAAAATACAGGGA...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp AATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAGGCAGCGGGGGCAGCTGTCTAGAGCTTTTTaGTTCCCTGTATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: NAGHRQGACSCHGRQRGQLSRAF*FPVFFL
Trigger: CAGGAAAAATACAGGGAATCAAAAAGCTCTAGACAG...CTGCCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GGTGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTATACCTGAGCATAGTCTaGACAACCTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GASVKMQVTGREHAPAMVYLSIV*TTWKAA
Trigger: CGCAGCCTTCCAGGTTGTTCAGACTATGCTCAGGTA...TACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCAACAGAGGATCCAAATTaGGAAGGAACGCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPTEDPN*EGTQNC
Trigger: ACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGT...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGGGCAAGAGCTGTCGTTaGCTTTTCATTCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMGKSCR*LFIRFT
Trigger: AGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCC...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTGCTCTCCACAGGTGTTaGCAAGAGCTGTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFALHRC*QELSLA
Trigger: AGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGC...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCAATTAGTCCTATTTCATaGCAGAAACTTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPISPIS*QKLCPL
Trigger: CAGAGGGCAAAGTTTCTGTCATGAAATAGGACTAAT...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTACCTGAGCATAGTCTaGACAACCTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLYLSIV*TTWKAA
Trigger: CGCAGCCTTCCAGGTTGTTCAGACTATGCTCAGGTA...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCTACCTGAGCATAGTCTaGACAACCTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: APWASLLHESPRKADFLFYLSIV*TTWKAA
Trigger: CGCAGCCTTCCAGGTTGTTCAGACTATGCTCAGGTA...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CCAGGAATTAGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGCAGGGAGCATGCTCCTaGCATGGTAGGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGIRIQKRGCICWLIKCLQGACS*HGRQRG
Trigger: CCCCCGCTGCCTACCATGGCAGGAGCATGCTCCCTG...CAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCTAATTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATCACCGGCAGGGAGCATaGTCCTGCCATGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHHRQGA*SCHGRQ
Trigger: CTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTG...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCATCGTCCCAGGCCTTTaGTTTCAGGGTAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: APWASLLHESPRKADFLFIVPGL*FQGSGV
Trigger: CACACCACTACCCTGAAAGCAAAGGCCTGGGACGAT...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCAGGTTGCAAAAATCTaGTCCGAAGCCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASQVAKI*SEASSF
Trigger: GAAAGAGGAGGCTTCGGAGCAGATTTTTGCAACCTG...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGACAGAGGATCCAAATTaGGAAGGAACGCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMTEDPN*EGTQNC
Trigger: ACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGT...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGGGGCAGCTGGGACACTaGAGCCATAGAGGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKGQLGH*SHRGRV
Trigger: TACCCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCC...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CCAGGAATTAGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGGGCAGCGGGGGCAGCTaGGACACTGGAGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: PGIRIQKRGCICWLIKCLGSGGS*DTGAIE
Trigger: CTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCC...CAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCTAATTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCCAGTTGCCGCTAGCATaGGGTTTCCCTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: APWASLLHESPRKADFLFQLPLA*GFPEGF
Trigger: GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTG...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCCAGTGCATGTGTTCCTaGCAGAGATGGTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLQCMCS*QRWSRN
Trigger: GTTCCTCGACCATCTCTGCCAGGAACACATGCACTG...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTGGAGGCCATCCTCTATaGAGACTTCTTGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASGGHPL*RLLVFD
Trigger: ATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCC...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTTGGCCACTGCCTTTATaGATTCAGGTGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: SHLVLGSFSPGREAPWASWPLPL*IQVVKC
Trigger: GCATTTTACCACCTGAATCCATAAAGGCAGTGGCCA...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTCCCCAGGGTTTCCTATaGGTGGGCTCGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARAVVGFSFVSLDFWLLGPQGFL*VGSSSP
Trigger: TGGAGAGCTCGAGCCCACCCATAGGAAACCCTGGGG...ACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCATTCGTTTCACTTaGCTTCTGGTTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLFIRFT*LLVAGC
Trigger: GCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAA...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCATTCAGGTGGTAAAATaGCCCAACCTGGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: APWASLLHESPRKADFLFIQVVK*PNLGRS
Trigger: GGATCTACCCAGGTTGGGGCATTTTACCACCTGAAT...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCATTCAGGTGGTAAAATaGCCCAACCTGGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLIQVVK*PNLGRS
Trigger: GGATCTACCCAGGTTGGGGCATTTTACCACCTGAAT...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAAAGTCGACGACATCTCTaGCCCCAGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLESRRHL*PQLSSK
Trigger: CTTTGAGGAGAGCTGGGGGCAGAGATGTCGTCGACT...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCCCAATTGTAACCAGTaGATGTGTTCCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFPNCNQ*MCSWQR
Trigger: TCTCTGCCAGGAACACATGCACTGGTTACAATTGGG...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGATGGAAACATCCATCTaGAGCTTTCTTGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMMETSI*SFLDVC
Trigger: ACAAACATCAAGAAAGCTGCAGATGGATGTTTCCAT...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCGGGCAGCTGGGACACTaGAGCCATAGAGGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFGQLGH*SHRGRV
Trigger: TACCCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCC...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAAGCTCTCCACAGGTGTTaGCAAGAGCTGTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLEALHRC*QELSLA
Trigger: AGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGC...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGTTCCTGGCAGAGATaGTCGAGGAACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLECSWQR*SRNWRA
Trigger: TGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTGGAGGCCCAAATGGTaGGGGGATCAGTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSWRPKW*GDQWDC
Trigger: ACAATCCCACTGATCCCCTCACCATTTGGGCCTCCA...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCAGGGTAGTGGTGTaGGACCCCCAGGGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHFRVVV*DPQGFL
Trigger: TAGGAAACCCTGGGGGTCTCACACCACTACCCTGAA...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGGCTGGAAATCTGGAATaGGAAGAGATGGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKAGNLE*EEMESW
Trigger: CCACGACTCCATCTCTTCTCATTCCAGATTTCCAGC...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TCTCCTCAAAGTGTGGTGCAGTTGCCGCTAGCATGGGGTTTCCCTGAAGGTTTCATTCCTTCTGGCCACTaGCTTTATGGATTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPQSVVQLPLAWGFPEGFIPSGH*LYGFRW
Trigger: CCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAAT...GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTGCACCACACTTTGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAATGTCTGGGTCTTTTaGATAATGATCCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMNVWVF*IMILFI
Trigger: TATGAAGAGGATCATTATGCAAAAGACCCAGACATT...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GGTGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAAAGAGGGGATGTATCTaGTGGTTGATCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: GASVKMQVTGREHAPAMVKRGCI*WLIKCL
Trigger: CAAGCATTTGATCAACCAGCAGATACATCCCCTCTT...TACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAACTGTCTTGGGTCAGTTaGAGCTACGGTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLELSWVS*SYGGRQ
Trigger: TTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAG...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTCAGTTGCCGCTAGCATaGGGTTTCCCTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: EMESWSASPFLFCTSARSQLPLA*GFPEGF
Trigger: GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTG...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTGTTTCACTTGACTTCTaGTTGCTGGGTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFVSLDF*LLGASM
Trigger: CATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAAC...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTAGGGTTTCCTATGGGTaGGCTCGAGCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGRVSYG*ARALHR
Trigger: CCTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCT...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTTTCTCCATCCAGTACTaGGAAATCCTCACACATCCT +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFFSIQY*EILTHP
Trigger: AGGATGTGTGAGGATTTCCCAGTACTGGATGGAGAA...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAGGGGTCATTCAGCCCTaGCAGGGAAGCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLGVIQP*QGSPLG
Trigger: GCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCC...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGGGGCCTGCTTCACGCTaGAAATCTGGAATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKGPASR*KSGMRR
Trigger: TCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCC...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CAA 72 bp GCTCGAGCTCTCCACAGGTGTTGGCAAGAGCTGTCGTaGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: ARALHRCWQELS*AFHSFHLTSGC
Trigger: GCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCTCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp CCAGGAATTAGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTGGAGGCCCAAATGGTaGGGGGATCAGTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: PGIRIQKRGCICWLIKCLWRPKW*GDQWDC
Trigger: ACAATCCCACTGATCCCCTCACCATTTGGGCCTCCA...CAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCTAATTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACCTGAGGGTGCTTCTGTaGAAATGCAGGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHLRVLL*KCRSPA
Trigger: TGCCGGTGACCTGCATTTTCACAGAAGCACCCTCAG...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATCCCTGTATTTTTCCTaGGTCGACGACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLESLYFS*VDDISA
Trigger: GGCAGAGATGTCGTCGACTCAGGAAAAATACAGGGA...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGAGAAGCTTCTCTGGCTaGGGGTTGAAAGGTACATCT +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKRSFSG*GLKGTS
Trigger: AGATGTACCTTTCAACCCGCAGCCAGAGAAGCTTCT...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGATTCCTTCTGGCCACTaGCTTTATGGATTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKIPSGH*LYGFRW
Trigger: CCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAAT...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACAGTCGACGACATCTCTaGCCCCAGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHSRRHL*PQLSSK
Trigger: CTTTGAGGAGAGCTGGGGGCAGAGATGTCGTCGACT...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCAAGAGGGGATGTATCTaGTGGTTGATCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLKRGCI*WLIKCL
Trigger: CAAGCATTTGATCAACCAGCAGATACATCCCCTCTT...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCGTGGTTTCATTGGGTTaGCTTTATCTCTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: APWASLLHESPRKADFLFVVSLG*LYLFQG
Trigger: ACCCTGAAAGAGATAAAGGCAACCCAATGAAACCAC...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATCTGTCTTGGGTCAGTTaGAGCTACGGTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHLSWVS*SYGGRQ
Trigger: TTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAG...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTTTTCCATTTCTGTCCTaGCAGTATGATGCCGTTGAA +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFFPFLS*QYDAVE
Trigger: TTCAACGGCATCATACTGCCAGGACAGAAATGGAAA...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TCTCCTCAAAGTGTGGTGCAGTTGCCGCTAGCATGGGGTTTCCCTGAAGGTTTCGGCAAGAGCTGTCGTTaGCTTTTCATTCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: SPQSVVQLPLAWGFPEGFGKSCR*LFIRFT
Trigger: AGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCC...GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTGCACCACACTTTGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTTGTTCCTGGCAGAGATaGTCGAGGAACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGCSWQR*SRNWRA
Trigger: TGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTAGGGGATGTATCTGCTaGTTGATCAAATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFRGCIC*LIKCLS
Trigger: AGACAAGCATTTGATCAACCAGCAGATACATCCCCT...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: REAPWASLLHESPRKADFGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGGCAGGGAAGCCCCTTaGGCAAGTCTCCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSGREAP*ASLLHE
Trigger: TTCATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCC...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCGTCTCCAGTCATTTaGTGCTGGGGTCATTCAGCC +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHASPVI*CWGHSA
Trigger: GGCTGAATGACCCCAGCACCAAATGACTGGAGACGC...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTTGGAGGCCCAAATGGTaGGGGGATCAGTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSWRPKW*GDQWDC
Trigger: ACAATCCCACTGATCCCCTCACCATTTGGGCCTCCA...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTGAGGGTGCTTCTGTaGAAATGCAGGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: LTSGCWVLQCLGLLHNDPLRVLL*KCRSPA
Trigger: TGCCGGTGACCTGCATTTTCACAGAAGCACCCTCAG...AGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCCTGTCTAGAGCTTTTTaGTTCCCTGTATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLLSRAF*FPVFFL
Trigger: CAGGAAAAATACAGGGAATCAAAAAGCTCTAGACAG...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTTCTGGCCTTCAACTaGAGAAGCTTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSFLAFN*RSFSGC
Trigger: GCAGCCAGAGAAGCTTCTGCAGTTGAAGGCCAGAAA...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAACACCGGCAGGGAGCATaGTCCTGCCATGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEHRQGA*SCHGRQ
Trigger: CTGCCTACCATGGCAGGAGCATGCTCCCTGCCGGTG...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAACAGGTTGCAAAAATCTaGTCCGAAGCCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLEQVAKI*SEASSF
Trigger: GAAAGAGGAGGCTTCGGAGCAGATTTTTGCAACCTG...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTGTCTTGGGTCAGTTaGAGCTACGGTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGLSWVS*SYGGRQ
Trigger: TTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAG...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTAACGCAAAACTGTCTTaGGTCAGTTGGAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: EMESWSASPFLFCTSARSNAKLS*VSWSYG
Trigger: ACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTT...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGTGGCCACTGCCTTTATaGATTCAGGTGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKWPLPL*IQVVKC
Trigger: GCATTTTACCACCTGAATCCATAAAGGCAGTGGCCA...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATGTGAGCCACCGCGCCTaGCCAAAACTCGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHVSHRA*PKLENL
Trigger: TAAATTTTCGAGTTTTGGCCAGGCGCGGTGGCTCAC...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CAA 72 bp TGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTaGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: WQELSLAFHSFH*TSGCWVLQCLG
Trigger: ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTTTCCCTGAAGGTTTCTaGGGGTGCTTCTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: EMESWSASPFLFCTSARSFPEGF*GCFCEN
Trigger: ATTTTCACAGAAGCACCCTCAGAAACCTTCAGGGAA...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTTCCCTGTATTTTTCCTaGGTCGACGACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGSLYFS*VDDISA
Trigger: GGCAGAGATGTCGTCGACTCAGGAAAAATACAGGGA...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTCATTCGTTTCACTTaGCTTCTGGTTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSFIRFT*LLVAGC
Trigger: GCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAA...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCATTCCTTCTGGCCACTaGCTTTATGGATTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSIPSGH*LYGFRW
Trigger: CCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAAT...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHHLTSG*WVLQCL
Trigger: CAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTG...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSHLTSG*WVLQCL
Trigger: CAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTG...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCATGGAAACATCCATCTaGAGCTTTCTTGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: EAPWASLLHESPRKADFLMETSI*SFLDVC
Trigger: ACAAACATCAAGAAAGCTGCAGATGGATGTTTCCAT...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAAGAGATTGTCTTACTTTaGAATCCCCAAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLEEIVLL*NPQRRP
Trigger: TGGCCTCCTTTGGGGATTCCAAAGTAAGACAATCTC...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGAACGCAAAACTGTCTTaGGTCAGTTGGAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: WQELSLAFHSFHLTSGCWNAKLS*VSWSYG
Trigger: ACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTT...CCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAGGGCAGCTGGGACACTaGAGCCATAGAGGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLGQLGH*SHRGRV
Trigger: TACCCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCC...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTTCATAGGGAACTGCAGTTGCCGCTAGCATaGGGTTTCCCTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WVLQCLGLLHNDPLHRELQLPLA*GFPEGF
Trigger: GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTG...CAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHLTSGC*VLQCLG
Trigger: ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTTGACTTCTGGTTGCTaGGTGCTTCAATGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFLTSGC*VLQCLG
Trigger: ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTTCTTCTGCCTCTCTGTaGTTTCATTGGGTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: EMESWSASPFLFCTSARSSSASL*FHWVAF
Trigger: AAAGGCAACCCAATGAAACCACAGAGAGGCAGAAGA...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGTTCACGCTGGAAATCTaGAATGAGAAGAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKFTLEI*NEKRWS
Trigger: ACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCAGGGTTTCCTATGGGTaGGCTCGAGCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFRVSYG*ARALHR
Trigger: CCTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCT...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAAGGGTTTCCTATGGGTaGGCTCGAGCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSERVSYG*ARALHR
Trigger: CCTGTGGAGAGCTCGAGCCCACCCATAGGAAACCCT...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTTCATAGGGAACTGAGATGGTCGAGGAACTaGAGGGCAAACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: WVLQCLGLLHNDPLHRELRWSRN*RANPIL
Trigger: AAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCT...CAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCCAGTCATTTGGTGCTaGGGTCATTCAGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEPVIWC*GHSALA
Trigger: TGCCAGGGCTGAATGACCCCAGCACCAAATGACTGG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGGGCCTGCTTCACGCTaGAAATCTGGAATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSGPASR*KSGMRR
Trigger: TCTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCC...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAAATTAGTCCTATTTCATaGCAGAAACTTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLEISPIS*QKLCPL
Trigger: CAGAGGGCAAAGTTTCTGTCATGAAATAGGACTAAT...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAACTGTCTAGAGCTTTTTaGTTCCCTGTATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLELSRAF*FPVFFL
Trigger: CAGGAAAAATACAGGGAATCAAAAAGCTCTAGACAG...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTATCAGTGGGATTGTCTaGTGCCCTGTTGGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSISGIV*CPVGVN
Trigger: ATTGACACCAACAGGGCAGCAGACAATCCCACTGAT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp CTGCTTGACTTTTGGAACTCTCAGCATCACTGTCTAGAGCTTTTTGATTCCCTGCTTCTGGTTGCTGGGTaGTTCAATGTCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLDFWNSQHHCLELFDSLLLVAG*FNVWVF
Trigger: AAAGACCCAGACATTGAAGCACCCAGCAACCAGAAG...CAGGGAATCAAAAAGCTCTAGACAGTGATGCTGAGAGTTCCAAAAGTCAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp CTGCTTGACTTTTGGAACTCTCAGCATCACTGTCTAGAGCTTTTTGATTCCCTGCACTTGACTTCTGGTTaGTGGGTGCTTCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLDFWNSQHHCLELFDSLHLTSG*WVLQCL
Trigger: CAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTG...CAGGGAATCAAAAAGCTCTAGACAGTGATGCTGAGAGTTCCAAAAGTCAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp AGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTCTTATAGGCAGGTTGCAAAAATCTaGTCCGAAGCCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RIQKRGCICWLIKCLSYRQVAKI*SEASSF
Trigger: GAAAGAGGAGGCTTCGGAGCAGATTTTTGCAACCTG...CCTATAAGACAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp TTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCCCAATTGTAACCAGTaGATGTGTTCCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LTSGCWVLQCLGLLHNDPPNCNQ*MCSWQR
Trigger: TCTCTGCCAGGAACACATGCACTGGTTACAATTGGG...AGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGAGATTGTCTTACTTTaGAATCCCCAAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHEIVLL*NPQRRP
Trigger: TGGCCTCCTTTGGGGATTCCAAAGTAAGACAATCTC...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTCAGTTGGAGCTACGGTaGAAGGCAATACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSQLELR*KAIHLC
Trigger: ACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTG...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCACAGAGGATCCAAATTaGGAAGGAACGCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFTEDPN*EGTQNC
Trigger: ACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGT...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCGCTCTCCACAGGTGTTaGCAAGAGCTGTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFALHRC*QELSLA
Trigger: AGCCAACGACAGCTCTTGCCAACACCTGTGGAGAGC...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATGTTCCTGGCAGAGATaGTCGAGGAACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSECSWQR*SRNWRA
Trigger: TGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCAGGGGATGTATCTGCTaGTTGATCAAATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSRGCIC*LIKCLS
Trigger: AGACAAGCATTTGATCAACCAGCAGATACATCCCCT...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACTTCTCCATCCAGTACTaGGAAATCCTCACACATCCT +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHFSIQY*EILTHP
Trigger: AGGATGTGTGAGGATTTCCCAGTACTGGATGGAGAA...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCCAGTCATTTGGTGCTaGGGTCATTCAGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFPVIWC*GHSALA
Trigger: TGCCAGGGCTGAATGACCCCAGCACCAAATGACTGG...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAGCGTCTCCAGTCATTTaGTGCTGGGGTCATTCAGCC +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEASPVI*CWGHSA
Trigger: GGCTGAATGACCCCAGCACCAAATGACTGGAGACGC...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
3UTR CAA 72 bp ACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTaGCATAATGATCCTCTTCATAGGGAACTGCATGAG +
Preference number: 4 (lower is better)
Translates to: TSGCWVLQCLGL*HNDPLHRELHE
Trigger: CTCATGCAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTAGAAACTTTGCCCTCTaGTATCCTCTACAGATAGGC +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSRNFAL*YPLQIG
Trigger: GCCTATCTGTAGAGGATATCAGAGGGCAAAGTTTCT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTTTCCCTGAAGGTTTCTaGGGGTGCTTCTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSFPEGF*GCFCEN
Trigger: ATTTTCACAGAAGCACCCTCAGAAACCTTCAGGGAA...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTTCCACGGTCCACTTCTaGATATCTTCATCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGSTVHF*ISSSKE
Trigger: TTCTTTGGATGAAGATATTCAGAAGTGGACCGTGGA...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCACTATTCTTCCTCCTTaGGGGCTTTTAGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSTILPP*GLLVSH
Trigger: ATGAGAAACTAAAAGCCCTCAAGGAGGAAGAATAGT...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTTTCTGGCCTTCAACTaGAGAAGCTTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEFLAFN*RSFSGC
Trigger: GCAGCCAGAGAAGCTTCTGCAGTTGAAGGCCAGAAA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TGTTCCTGGCAGAGATGGTCGAGGAACTGGAGGGCAAACCCCATTCTTTTCATCAATGTCTGGGTCTTTTaGATAATGATCCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: CSWQRWSRNWRANPILFINVWVF*IMILFI
Trigger: TATGAAGAGGATCATTATGCAAAAGACCCAGACATT...GATGAAAAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCTCTGCCAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCATCGTCCCAGGCCTTTaGTTTCAGGGTAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFIVPGL*FQGSGV
Trigger: CACACCACTACCCTGAAAGCAAAGGCCTGGGACGAT...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR GCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATCTCCAGTCATTTGGTaGTGGGGTCATTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSESPVIW*WGHSAL
Trigger: CAGGGCTGAATGACCCCAGCACCAAATGACTGGAGA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAACAGTGCATGTGTTCCTaGCAGAGATGGTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEQCMCS*QRWSRN
Trigger: GTTCCTCGACCATCTCTGCCAGGAACACATGCACTG...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATCTCTGGCTGCGGGTTaGAAGGTACATCTGACAATT +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLSLAAG*KVHLTI
Trigger: AATTGTCAGATGTACCTTTCAACCCGCAGCCAGAGA...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATATCACCAAAAGGAGATaGGATTGTCTTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHITKRR*DCLTLE
Trigger: TTCCAAAGTAAGACAATCTCATCTCCTTTTGGTGAT...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACACTATTCTTCCTCCTTaGGGGCTTTTAGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHTILPP*GLLVSH
Trigger: ATGAGAAACTAAAAGCCCTCAAGGAGGAAGAATAGT...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGAAGCCCCAGAAAGGCTaGCTTTCTCTTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEKPQKG*LSLLIL
Trigger: GAGAATGAGAAGAGAAAGTCAGCCTTTCTGGGGCTT...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAATTCAGGTGGTAAAATaGCCCAACCTGGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLIQVVK*PNLGRS
Trigger: GGATCTACCCAGGTTGGGGCATTTTACCACCTGAAT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR GCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCTTCTGGTTGCTGGGTaGTTCAATGTCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLELLVAG*FNVWVF
Trigger: AAAGACCCAGACATTGAAGCACCCAGCAACCAGAAG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR GCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTCTGTTCTGTACTTCTaGCCGTTCTCTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLESVLYF*PFSSAS
Trigger: AGAGGCAGAAGAGAACGGGCAGAAGTACAGAACAGA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTGCACAGCTAGTTCCTTaGCAGAGATTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LTSGCWVLQCLGLLHNDPAQLVP*QRLILK
Trigger: TTTGAGGATTAATCTCTGGCAAGGAACTAGCTGTGC...AGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGAACGCAAAACTGTCTTaGGTCAGTTGGAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLENAKLS*VSWSYG
Trigger: ACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTT...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCAGATGGTCGAGGAACTaGAGGGCAAACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFRWSRN*RANPIL
Trigger: AAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCT...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAAGATGGTCGAGGAACTaGAGGGCAAACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSERWSRN*RANPIL
Trigger: AAGAATGGGGTTTGCCCTCCAGTTCCTCGACCATCT...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CTGCTTGACTTTTGGAACTCTCAGCATCACTGTCTAGAGCTTTTTGATTCCCTGGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLDFWNSQHHCLELFDSLGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...CAGGGAATCAAAAAGCTCTAGACAGTGATGCTGAGAGTTCCAAAAGTCAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAGTGAGCCACCGCGCCTaGCCAAAACTCGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEVSHRA*PKLENL
Trigger: TAAATTTTCGAGTTTTGGCCAGGCGCGGTGGCTCAC...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAAGAAACTTTGCCCTCTaGTATCCTCTACAGATAGGC +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLRNFAL*YPLQIG
Trigger: GCCTATCTGTAGAGGATATCAGAGGGCAAAGTTTCT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR GCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAACCCAATTGTAACCAGTaGATGTGTTCCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEPNCNQ*MCSWQR
Trigger: TCTCTGCCAGGAACACATGCACTGGTTACAATTGGG...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCTGGGTAGATCCGACTaGACAACACATTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLELGRSD*TTHLPY
Trigger: ATATGGCAAATGTGTTGTCCAGTCGGATCTACCCAG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGTTTCACTTGACTTCTaGTTGCTGGGTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEVSLDF*LLGASM
Trigger: CATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAAC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGGGCAAGAGCTGTCGTTaGCTTTTCATTCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEGKSCR*LFIRFT
Trigger: AGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCC...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp TGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTCTTCATAGGGAACTGCATGAGGGGATGTATCTGCTaGTTGATCAAATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CFNVWVFCIMILFIGNCMRGCIC*LIKCLS
Trigger: AGACAAGCATTTGATCAACCAGCAGATACATCCCCT...CATGCAGTTCCCTATGAAGAGGATCATTATGCAAAAGACCCAGACATTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAGAGGTTTTCAAACCCTaGCAGTATGATGCCGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLEVFKP*QYDAVE
Trigger: TTCAACGGCATCATACTGCCAGGGTTTGAAAACCTC...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR TCA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTAAGACTTCTTGTCTTTaGTATTGCAGATGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSKTSCL*YCRWKN
Trigger: GTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTT...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCGGAGGCCATCCTCTATaGAGACTTCTTGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFGGHPL*RLLVFD
Trigger: ATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCC...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATCCACGGTCCACTTCTaGATATCTTCATCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLSTVHF*ISSSKE
Trigger: TTCTTTGGATGAAGATATTCAGAAGTGGACCGTGGA...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTGGGTAGATCCGACTaGACAACACATTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFLGRSD*TTHLPY
Trigger: ATATGGCAAATGTGTTGTCCAGTCGGATCTACCCAG...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCGTTTCACTTGACTTCTaGTTGCTGGGTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFVSLDF*LLGASM
Trigger: CATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAAC...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CCA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACCAGTTTCAGCTCTTTTaGTTTCTTCAGAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHQFQLF*FLQRFL
Trigger: AAGAAATCTCTGAAGAAACCAAAAGAGCTGAAACTG...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATCCACGGTCCACTTCTaGATATCTTCATCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSESTVHF*ISSSKE
Trigger: TTCTTTGGATGAAGATATTCAGAAGTGGACCGTGGA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAACTATTCTTCCTCCTTaGGGGCTTTTAGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLTILPP*GLLVSH
Trigger: ATGAGAAACTAAAAGCCCTCAAGGAGGAAGAATAGT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR GCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAAAGAGGGGATGTATCTaGTGGTTGATCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEKRGCI*WLIKCL
Trigger: CAAGCATTTGATCAACCAGCAGATACATCCCCTCTT...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAGGCTCTTTGGAAAACTaGCTAAGACTATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEGSLEN*LRLFFL
Trigger: GAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCC...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATTCACGCTGGAAATCTaGAATGAGAAGAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEFTLEI*NEKRWS
Trigger: ACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR TCA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAATCACCAAAAGGAGATaGGATTGTCTTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSHILCNILGSLENWLRLITKRR*DCLTLE
Trigger: TTCCAAAGTAAGACAATCTCATCTCCTTTTGGTGAT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCAGTTTCAGCTCTTTTaGTTTCTTCAGAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: CNILGSLENWLRLFFLLEQFQLF*FLQRFL
Trigger: AAGAAATCTCTGAAGAAACCAAAAGAGCTGAAACTG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CCA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCAAAAACCTAAAGTACTaGGAAGAGGTTTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: HILCNILGSLENWLRLFFKNLKY*EEVFKP
Trigger: GGGTTTGAAAACCTCTTCCCAGTACTTTAGGTTTTT...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR GCA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAAATGTCTGGGTCTTTTaGATAATGATCCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: FHWVAFISFRVWEWKMSENVWVF*IMILFI
Trigger: TATGAAGAGGATCATTATGCAAAAGACCCAGACATT...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCAAGGGGATCAGTGGGATaGTCTGCTGCCCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPRGSVG*SAALLV
Trigger: CACCAACAGGGCAGCAGACAATCCCACTGATCCCCT...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGCAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMQPSPG*SSISLA
Trigger: GGCGAGAGATATTGAAGACAAACCCGGTGATGGCTG...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGGAACGCAAAACTGTCTaGGGTCAGTTGGAGCTACGG +
Preference number: 5 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMERKTV*GQLELR
Trigger: CCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTC...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATTCTCTGGCTGCGGGTaGAAAGGTACATCTGACAAT +
Preference number: 5 (lower is better)
Translates to: GAGVIQPWQGSPLGKSPPFSGCG*KGTSDN
Trigger: ATTGTCAGATGTACCTTTCAACCCGCAGCCAGAGAA...TGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GGTGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTAAGGGGATCAGTGGGATaGTCTGCTGCCCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GASVKMQVTGREHAPAMVRGSVG*SAALLV
Trigger: CACCAACAGGGCAGCAGACAATCCCACTGATCCCCT...TACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTCTCCTCCATGTTGTCTGCTGCCCTGTaGGTGTCAATAAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: CWGHSALAGKPLGQVSSMLSAAL*VSIKGS
Trigger: TGAACCCTTTATTGACACCAACAGGGCAGCAGACAA...CATGGAGGAGACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GGTGCTTCTGTGAAAATGCAGGTCACCGGCAGGGAGCATGCTCCTGCCATGGTACATCTCTGTCCACAGTaGGAGGCCCAAATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GASVKMQVTGREHAPAMVHLCPQ*EAQMVR
Trigger: CCTCACCATTTGGGCCTCCAACTGTGGACAGAGATG...TACCATGGCAGGAGCATGCTCCCTGCCGGTGACCTGCATTTTCACAGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGAGGAAGGTTTCATTCGTTTCACTaGACTTCTGGTTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SCHGRQRGQLGHWSHRGRFHSFH*TSGCWV
Trigger: CACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAA...CCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCAGCTCTCCACAGGTGTaGGCAAGAGCTGTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: EAPWASLLHESPRKADFLSSPQV*ARAVVG
Trigger: GCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCT...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS GCA 90 bp TCCACAGTTGGAGGCCCAAATGGTGAGGGGATCAGTGGGATTGTCTaGTGCCCTGTTGGTGTCAATAAAGGGTTCACAGCCATCACCGGG +
Preference number: 5 (lower is better)
Translates to: STVGGPNGEGISGIV*CPVGVNKGFTAITG
Trigger: CCCGGTGATGGCTGTGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCCTCCAACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGAGGAAGGTCTTTTCATCACAGGTaGCAAAAATCTGCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: SCHGRQRGQLGHWSHRGRSFHHR*QKSAPK
Trigger: CTTCGGAGCAGATTTTTGCAACCTGTGATGAAAAGA...CCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp AGTCATTTGGTGCTGGGGTCATTCAGCCCTGGCAGGGAAGCCCCTTGGGCAAGTTTCTCTGGCTGCGGGTaGAAAGGTACATCTGACAAT +
Preference number: 5 (lower is better)
Translates to: SHLVLGSFSPGREAPWASFSGCG*KGTSDN
Trigger: ATTGTCAGATGTACCTTTCAACCCGCAGCCAGAGAA...ACTTGCCCAAGGGGCTTCCCTGCCAGGGCTGAATGACCCCAGCACCAAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGAGGGGATCAGTGGGATaGTCTGCTGCCCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKRGSVG*SAALLV
Trigger: CACCAACAGGGCAGCAGACAATCCCACTGATCCCCT...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGAGGAAGGTTGCCATATTTGTGTTaGGTAGAACAGAGGATCCAA +
Preference number: 5 (lower is better)
Translates to: SCHGRQRGQLGHWSHRGRLPYLC*VEQRIQ
Trigger: TTGGATCCTCTGTTCTACCAAACACAAATATGGCAA...CCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTGCCATGGTAGGCAGCGGGGGCAGCTGGGACACTGGAGCCATAGAGGAAGGGGATGTATCTGCTGGTaGATCAAATGCTTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SCHGRQRGQLGHWSHRGRGCICW*IKCLSY
Trigger: ATAAGACAAGCATTTGATCAACCAGCAGATACATCC...CCTTCCTCTATGGCTCCAGTGTCCCAGCTGCCCCCGCTGCCTACCATGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS GCA 90 bp ACAGTTGGAGGCCCAAATGGTGAGGGGATCAGTGGGATTGTCTGCTaGCCTGTTGGTGTCAATAAAGGGTTCACAGCCATCACCGGGTTT +
Preference number: 5 (lower is better)
Translates to: TVGGPNGEGISGIVC*PVGVNKGFTAITGF
Trigger: AAACCCGGTGATGGCTGTGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCCTCCAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGCAAAGTGTGGTGCAGTaGCCGCTAGCATGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKQSVVQ*PLAWGF
Trigger: GAAACCCCATGCTAGCGGCAACTGCACCACACTTTG...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGCAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKQPSPG*SSISLA
Trigger: GGCGAGAGATATTGAAGACAAACCCGGTGATGGCTG...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTGTCTGCTGCCCTGTaGGTGTCAATAAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: EAPWASLLHESPRKADFLLSAAL*VSIKGS
Trigger: TGAACCCTTTATTGACACCAACAGGGCAGCAGACAA...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAAACTGTCTTGGGTCAGTaGGAGCTACGGTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLETVLGQ*ELRWKA
Trigger: TGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGT...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTCAAAGTGTGGTGCAGTaGCCGCTAGCATGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSQSVVQ*PLAWGF
Trigger: GAAACCCCATGCTAGCGGCAACTGCACCACACTTTG...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTGGCAAGAGCTGTCGTaGGCTTTTCATTCGTTTCAC +
Preference number: 5 (lower is better)
Translates to: EAPWASLLHESPRKADFLWQELS*AFHSFH
Trigger: GTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA...GAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATAGCTCTCCACAGGTGTaGGCAAGAGCTGTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHSSPQV*ARAVVG
Trigger: GCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCT...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGCGGGGTTTCACCATGTaGGCCAAGCTGGTCTTAATC +
Preference number: 5 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKRGFTM*AKLVLI
Trigger: GATTAAGACCAGCTTGGCCAACATGGTGAAACCCCG...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTGAACGCAAAACTGTCTaGGGTCAGTTGGAGCTACGG +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSERKTV*GQLELR
Trigger: CCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTC...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CCA 90 bp AGAGGATCCAAATTGGGAAGGAACGCAAAACTGTCTTGGGTCAGTTaGAGCTACGGTGGAAGGCAATACATCTCTGTCCACAGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: RGSKLGRNAKLSWVS*SYGGRQYISVHSWR
Trigger: CCTCCAACTGTGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp CCAGGAATTAGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGACTGTCTTGGGTCAGTaGGAGCTACGGTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PGIRIQKRGCICWLIKCLTVLGQ*ELRWKA
Trigger: TGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGT...CAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCTAATTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCGGCAGTATGATGCCGTaGAATCATTTCATTCCTTCT +
Preference number: 5 (lower is better)
Translates to: APWASLLHESPRKADFLFGSMMP*NHFIPS
Trigger: AGAAGGAATGAAATGATTCAACGGCATCATACTGCC...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCAAAGTGTGGTGCAGTaGCCGCTAGCATGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGQSVVQ*PLAWGF
Trigger: GAAACCCCATGCTAGCGGCAACTGCACCACACTTTG...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp GCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: AFHSFHLTSGCWVLQCLGQPSPG*SSISLA
Trigger: GGCGAGAGATATTGAAGACAAACCCGGTGATGGCTG...ACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp GAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTCATCTCTGTCCACAGTaGGAGGCCCAAATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EIWNEKRWSRGQLLHFCSHLCPQ*EAQMVR
Trigger: CCTCACCATTTGGGCCTCCAACTGTGGACAGAGATG...AGAACAGAAATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCTCTTCTTGCCATATTTGTGTTaGGTAGAACAGAGGATCCAA +
Preference number: 5 (lower is better)
Translates to: APWASLLHESPRKADFLFLPYLC*VEQRIQ
Trigger: TTGGATCCTCTGTTCTACCAAACACAAATATGGCAA...GAAGAGAAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTACACATTTGCCATATTaGTGTTTGGTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: REAPWASLLHESPRKADFTHLPY*CLVEQR
Trigger: CCTCTGTTCTACCAAACACAAATATGGCAAATGTGT...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp AGGGAAGCCCCTTGGGCAAGTCTCCTCCATGAAAGCCCCAGAAAGGCTGACTTTCAATGTCTGGGTCTTTaGCATAATGATCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: REAPWASLLHESPRKADFQCLGL*HNDPLH
Trigger: ATGAAGAGGATCATTATGCAAAAGACCCAGACATTG...AAAGTCAGCCTTTCTGGGGCTTTCATGGAGGAGACTTGCCCAAGGGGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CCA 90 bp TATGATGCCGTTGAATCATTTCATTCCTTCTGGCCACTGCCTTTATaGATTCAGGTGGTAAAATGCCCCAACCTGGGTAGATCCGACTGG +
Preference number: 5 (lower is better)
Translates to: YDAVESFHSFWPLPL*IQVVKCPNLGRSDW
Trigger: CCAGTCGGATCTACCCAGGTTGGGGCATTTTACCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAATGAAATGATTCAACGGCATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTTGTCTGCTGCCCTGTaGGTGTCAATAAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFLSAAL*VSIKGS
Trigger: TGAACCCTTTATTGACACCAACAGGGCAGCAGACAA...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTAACAGAGGATCCAAATaGGGAAGGAACGCAAAACTG +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSNRGSK*GRNAKL
Trigger: CAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTT...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TCTCCTCAAAGTGTGGTGCAGTTGCCGCTAGCATGGGGTTTCCCTGAAGGTTTCACACATTTGCCATATTaGTGTTTGGTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: SPQSVVQLPLAWGFPEGFTHLPY*CLVEQR
Trigger: CCTCTGTTCTACCAAACACAAATATGGCAAATGTGT...GAAACCTTCAGGGAAACCCCATGCTAGCGGCAACTGCACCACACTTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TTCACGCTGGAAATCTGGAATGAGAAGAGATGGAGTCGTGGTCAGCTTCTCCATTGGCAAGAGCTGTCGTaGGCTTTTCATTCGTTTCAC +
Preference number: 5 (lower is better)
Translates to: FTLEIWNEKRWSRGQLLHWQELS*AFHSFH
Trigger: GTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA...ATGGAGAAGCTGACCACGACTCCATCTCTTCTCATTCCAGATTTCCAGCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAAGCTCTCCACAGGTGTaGGCAAGAGCTGTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLSSPQV*ARAVVG
Trigger: GCCAACGACAGCTCTTGCCAACACCTGTGGAGAGCT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CCA 90 bp TTTCTGTCCTGGCAGTATGATGCCGTTGAATCATTTCATTCCTTCTaGCCACTGCCTTTATGGATTCAGGTGGTAAAATGCCCCAACCTG +
Preference number: 5 (lower is better)
Translates to: FLSWQYDAVESFHSF*PLPLWIQVVKCPNL
Trigger: CAGGTTGGGGCATTTTACCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAATGAAATGATTCAACGGCATCATACTGCCAGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CCA 90 bp TTCAAACCCTGGCAGTATGATGCCGTTGAATCATTTCATTCCTTCTaGCCACTGCCTTTATGGATTCAGGTGGTAAAATGCCCCAACCTG +
Preference number: 5 (lower is better)
Translates to: FKPWQYDAVESFHSF*PLPLWIQVVKCPNL
Trigger: CAGGTTGGGGCATTTTACCACCTGAATCCATAAAGGCAGTGGCCAGAAGGAATGAAATGATTCAACGGCATCATACTGCCAGGGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCATCTCTGTCCACAGTaGGAGGCCCAAATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CNILGSLENWLRLFFLLEHLCPQ*EAQMVR
Trigger: CCTCACCATTTGGGCCTCCAACTGTGGACAGAGATG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATCTTTTCATCACAGGTaGCAAAAATCTGCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LKLLTFPSLGLLHAGNLESFHHR*QKSAPK
Trigger: CTTCGGAGCAGATTTTTGCAACCTGTGATGAAAAGA...TTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTCTCACCTTCCCTAGCTTGGGCCTGCTTCACGCTGGAAATCTGGAATGAGAAGAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 5 (lower is better)
Translates to: FSPSLAWACFTLEIWNEKNILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...CTTCTCATTCCAGATTTCCAGCGTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGTGCGTCTCCAGTCATTaGGTGCTGGGGTCATTCAGC +
Preference number: 5 (lower is better)
Translates to: CNILGSLENWLRLFFLLECVSSH*VLGSFS
Trigger: GCTGAATGACCCCAGCACCAAATGACTGGAGACGCA...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CCACAGGTGTTGGCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCAGCACAGCTAGTTCCTaGCCAGAGATTAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: PQVLARAVVGFSFVSLDFSTASS*PEINPQ
Trigger: TTGAGGATTAATCTCTGGCAAGGAACTAGCTGTGCT...GAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCAACACCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAACTGTCTTGGGTCAGTaGGAGCTACGGTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FHWVAFISFRVWEWKMSETVLGQ*ELRWKA
Trigger: TGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGT...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTTTGCCATATTTGTGTTaGGTAGAACAGAGGATCCAA +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSLPYLC*VEQRIQ
Trigger: TTGGATCCTCTGTTCTACCAAACACAAATATGGCAA...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTGACTGGACAACACATTaGCCATATTTGTGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSDWTTH*PYLCLV
Trigger: TACCAAACACAAATATGGCAAATGTGTTGTCCAGTC...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GAGATGGAGTCGTGGTCAGCTTCTCCATTTCTGTTCTGTACTTCTGCCCGTTCTAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 5 (lower is better)
Translates to: EMESWSASPFLFCTSARSNILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...AGAACGGGCAGAAGTACAGAACAGAAATGGAGAAGCTGACCACGACTCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCTGCGTCTCCAGTCATTaGGTGCTGGGGTCATTCAGC +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFCVSSH*VLGSFS
Trigger: GCTGAATGACCCCAGCACCAAATGACTGGAGACGCA...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCGGGGTTTCACCATGTaGGCCAAGCTGGTCTTAATC +
Preference number: 5 (lower is better)
Translates to: CNILGSLENWLRLFFLLERGFTM*AKLVLI
Trigger: GATTAAGACCAGCTTGGCCAACATGGTGAAACCCCG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS GCA 90 bp ATATTGCAGATGGAAGAACCATACAAAGACTTTCTGGCCTTCAACTaGAGAAGCTTCTCTGGCTGCGGGTTGAAAGGTACATCTGACAAT +
Preference number: 5 (lower is better)
Translates to: ILQMEEPYKDFLAFN*RSFSGCGLKGTSDN
Trigger: ATTGTCAGATGTACCTTTCAACCCGCAGCCAGAGAAGCTTCTGCAGTTGAAGGCCAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CCA 90 bp AACACATTTGCCATATTTGTGTTTGGTAGAACAGAGGATCCAAATTaGGAAGGAACGCAAAACTGTCTTGGGTCAGTTGGAGCTACGGTG +
Preference number: 5 (lower is better)
Translates to: NTFAIFVFGRTEDPN*EGTQNCLGSVGATV
Trigger: CACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTTCTACCAAACACAAATATGGCAAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACTTCATGACAGAAACTTaGCCCTCTGATATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHFMTET*PSDILY
Trigger: GTAGAGGATATCAGAGGGCAAAGTTTCTGTCATGAA...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCGAACGCAAAACTGTCTaGGGTCAGTTGGAGCTACGG +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFERKTV*GQLELR
Trigger: CCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTC...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp AGGATCCAGAAGAGGGGATGTATCTGCTGGTTGATCAAATGCTTGTCTTATAGGAACAGAGGATCCAAATaGGGAAGGAACGCAAAACTG +
Preference number: 5 (lower is better)
Translates to: RIQKRGCICWLIKCLSYRNRGSK*GRNAKL
Trigger: CAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTT...CCTATAAGACAAGCATTTGATCAACCAGCAGATACATCCCCTCTTCTGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp CGCGCCTGGCCAAAACTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCACACATTTGCCATATTaGTGTTTGGTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: RAWPKLENLRLKLLTFPSTHLPY*CLVEQR
Trigger: CCTCTGTTCTACCAAACACAAATATGGCAAATGTGT...GCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAGTTTTGGCCAGGCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp GCAAGAGCTGTCGTTGGCTTTTCATTCGTTTCACTTGACTTCTGGTTGCTGGGTCAATGTCTGGGTCTTTaGCATAATGATCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: ARAVVGFSFVSLDFWLLGQCLGL*HNDPLH
Trigger: ATGAAGAGGATCATTATGCAAAAGACCCAGACATTG...ACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAAAGCCAACGACAGCTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACTCTTTTCATCACAGGTaGCAAAAATCTGCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHSFHHR*QKSAPK
Trigger: CTTCGGAGCAGATTTTTGCAACCTGTGATGAAAAGA...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CTCGAAAATTTAAGGTTAAAGCTTCTCACCTTCCCTAGCTTGGGCCTGCTTCACCTCTCTGTGGTTTCATaGGGTTGCCTTTATCTCTTT +
Preference number: 5 (lower is better)
Translates to: LENLRLKLLTFPSLGLLHLSVVS*GCLYLF
Trigger: AAAGAGATAAAGGCAACCCAATGAAACCACAGAGAG...GTGAAGCAGGCCCAAGCTAGGGAAGGTGAGAAGCTTTAACCTTAAATTTTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS TCA 90 bp TGGAATCCCCAAAGGAGGCCATCCTCTATGAAGACTTCTTGTCTTTaGTATTGCAGATGGAAGAACCATACAAAGACTTTCTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: WNPQRRPSSMKTSCL*YCRWKNHTKTFWPS
Trigger: TGAAGGCCAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTGACTTCTGGTTGCTGGGTGCTTCAATGTCTGGGTCTTTTGCATAATGATCCTGGCAGTATGATGCCGTaGAATCATTTCATTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LTSGCWVLQCLGLLHNDPGSMMP*NHFIPS
Trigger: AGAAGGAATGAAATGATTCAACGGCATCATACTGCC...AGGATCATTATGCAAAAGACCCAGACATTGAAGCACCCAGCAACCAGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATGGCAAGAGCTGTCGTaGGCTTTTCATTCGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLWQELS*AFHSFH
Trigger: GTGAAACGAATGAAAAGCCAACGACAGCTCTTGCCA...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCCTTGAGCCATCTGCAGCTTTCTaGATGTTTGTAAATCTCCCC +
Preference number: 5 (lower is better)
Translates to: CNILGSLENWLRLFFLLEPSAAF*MFVNLP
Trigger: GGGGAGATTTACAAACATCAAGAAAGCTGCAGATGG...CTCAAGGAGGAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCAACAGAGGATCCAAATaGGGAAGGAACGCAAAACTG +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFNRGSK*GRNAKL
Trigger: CAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTT...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATTTCATTCGTTTCACTaGACTTCTGGTTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEFHSFH*TSGCWV
Trigger: CACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCTTTCATTCGTTTCACTaGACTTCTGGTTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFFHSFH*TSGCWV
Trigger: CACCCAGCAACCAGAAGTCAAGTGAAACGAATGAAA...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATGTGGTTTCATTGGGTaGCCTTTATCTCTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: FHWVAFISFRVWEWKMSECGFIG*PLSLSG
Trigger: CCCTGAAAGAGATAAAGGCAACCCAATGAAACCACA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS TCA 90 bp ATGAGATTGTCTTACTTTGGAATCCCCAAAGGAGGCCATCCTCTATaGAGACTTCTTGTCTTTGATATTGCAGATGGAAGAACCATACAA +
Preference number: 5 (lower is better)
Translates to: MRLSYFGIPKGGHPL*RLLVFDIADGRTIQ
Trigger: TTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTCCAAAGTAAGACAATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAATTCATGACAGAAACTTaGCCCTCTGATATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEFMTET*PSDILY
Trigger: GTAGAGGATATCAGAGGGCAAAGTTTCTGTCATGAA...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAGACTGGACAACACATTaGCCATATTTGTGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLDWTTH*PYLCLV
Trigger: TACCAAACACAAATATGGCAAATGTGTTGTCCAGTC...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCGGCAGTATGATGCCGTaGAATCATTTCATTCCTTCT +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFGSMMP*NHFIPS
Trigger: AGAAGGAATGAAATGATTCAACGGCATCATACTGCC...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAGGATGTATCTGCTGGTaGATCAAATGCTTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLGCICW*IKCLSY
Trigger: ATAAGACAAGCATTTGATCAACCAGCAGATACATCC...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTAAATATCCTAGGCTCTTaGGAAAACTGGCTAAGACTA +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLNILGS*ENWLRL
Trigger: TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATT...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS-3UTR CAA 90 bp CACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTATTCTTCCTCTCTGTGGTTTCATaGGGTTGCCTTTATCTCTTT +
Preference number: 5 (lower is better)
Translates to: HILCNILGSLENWLRLFFLSVVS*GCLYLF
Trigger: AAAGAGATAAAGGCAACCCAATGAAACCACAGAGAG...GAAGAATAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TCCTCACACATCCTTTGTAATATCCTAGGCTCTTTGGAAAACTGGCTAAGACTACTCTATGAAGACTTCTaGTCTTTGATATTGCAGATG +
Preference number: 5 (lower is better)
Translates to: SSHILCNILGSLENWLRLLYEDF*SLILQM
Trigger: CATCTGCAATATCAAAGACAAGAAGTCTTCATAGAG...TAGTCTTAGCCAGTTTTCCAAAGAGCCTAGGATATTACAAAGGATGTGTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS-3UTR CAA 90 bp TTTCATTGGGTTGCCTTTATCTCTTTCAGGGTTTGGGAATGGAAAATGAGTGAAGAAGACTTCTTGTCTTaGATATTGCAGATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FHWVAFISFRVWEWKMSEEDFLS*ILQMEE
Trigger: TTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTC...TTCACTCATTTTCCATTCCCAAACCCTGAAAGAGATAAAGGCAACCCAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS GCA 72 bp GGAGGCCCAAATGGTGAGGGGATCAGTGGGATTGTCTaGTGCCCTGTTGGTGTCAATAAAGGGTTCACAGCC +
Preference number: 6 (lower is better)
Translates to: GGPNGEGISGIV*CPVGVNKGFTA
Trigger: GGCTGTGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS GCA 72 bp GGCCCAAATGGTGAGGGGATCAGTGGGATTGTCTGCTaGCCTGTTGGTGTCAATAAAGGGTTCACAGCCATC +
Preference number: 6 (lower is better)
Translates to: GPNGEGISGIVC*PVGVNKGFTAI
Trigger: GATGGCTGTGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp CTCTGTCCACAGTTGGAGGCCCAAATGGTGAGGGGATCAGTGGGATaGTCTGCTGCCCTGTTGGTGTCAATAAAGGGTTCACAGCCATCA +
Preference number: 6 (lower is better)
Translates to: LCPQLEAQMVRGSVG*SAALLVSIKGSQPS
Trigger: TGATGGCTGTGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCCTCCAACTGTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CCA 72 bp GAACGCAAAACTGTCTTGGGTCAGTTGGAGCTACGGTaGAAGGCAATACATCTCTGTCCACAGTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: ERKTVLGQLELR*KAIHLCPQLEA
Trigger: GGCCTCCAACTGTGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp CAGTTGGAGGCCCAAATGGTGAGGGGATCAGTGGGATaGTCTGCTGCCCTGTTGGTGTCAATAAAGGGTTCA +
Preference number: 6 (lower is better)
Translates to: QLEAQMVRGSVG*SAALLVSIKGS
Trigger: TGAACCCTTTATTGACACCAACAGGGCAGCAGACAATCCCACTGATCCCCTCACCATTTGGGCCTCCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp CAGAGGATCCAAATTGGGAAGGAACGCAAAACTGTCTTGGGTCAGTaGGAGCTACGGTGGAAGGCAATACATCTCTGTCCACAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: QRIQIGKERKTVLGQ*ELRWKAIHLCPQLE
Trigger: CTCCAACTGTGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp GCTGCCCTGTTGGTGTCAATAAAGGGTTCACAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCCACTAATGGAGTTCACCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AALLVSIKGSQPSPG*SSISLATNGVHLFL
Trigger: GAGGAAGAGGTGAACTCCATTAGTGGCGAGAGATATTGAAGACAAACCCGGTGATGGCTGTGAACCCTTTATTGACACCAACAGGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428432.6
CDS CCA 72 bp AAATTGGGAAGGAACGCAAAACTGTCTTGGGTCAGTTaGAGCTACGGTGGAAGGCAATACATCTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: KLGRNAKLSWVS*SYGGRQYISVH
Trigger: GTGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp CAAATTGGGAAGGAACGCAAAACTGTCTTGGGTCAGTaGGAGCTACGGTGGAAGGCAATACATCTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: QIGKERKTVLGQ*ELRWKAIHLCP
Trigger: TGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp CAGAGGATCCAAATTGGGAAGGAACGCAAAACTGTCTaGGGTCAGTTGGAGCTACGGTGGAAGGCAATACAT +
Preference number: 6 (lower is better)
Translates to: QRIQIGKERKTV*GQLELRWKAIH
Trigger: ATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp TTGGTAGAACAGAGGATCCAAATTGGGAAGGAACGCAAAACTGTCTaGGGTCAGTTGGAGCTACGGTGGAAGGCAATACATCTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LVEQRIQIGKERKTV*GQLELRWKAIHLCP
Trigger: TGGACAGAGATGTATTGCCTTCCACCGTAGCTCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp TGCCCCAACCTGGGTAGATCCGACTGGACAACACATTaGCCATATTTGTGTTTGGTAGAACAGAGGATCCAA +
Preference number: 6 (lower is better)
Translates to: CPNLGRSDWTTH*PYLCLVEQRIQ
Trigger: TTGGATCCTCTGTTCTACCAAACACAAATATGGCAAATGTGTTGTCCAGTCGGATCTACCCAGGTTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp GTGGTAAAATGCCCCAACCTGGGTAGATCCGACTGGACAACACATTaGCCATATTTGTGTTTGGTAGAACAGAGGATCCAAATTGGGAAG +
Preference number: 6 (lower is better)
Translates to: VVKCPNLGRSDWTTH*PYLCLVEQRIQIGK
Trigger: CTTCCCAATTTGGATCCTCTGTTCTACCAAACACAAATATGGCAAATGTGTTGTCCAGTCGGATCTACCCAGGTTGGGGCATTTTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp TTGGTGTCAATAAAGGGTTCACAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCCACTAATGGAGTTCAC +
Preference number: 6 (lower is better)
Translates to: LVSIKGSQPSPG*SSISLATNGVH
Trigger: GTGAACTCCATTAGTGGCGAGAGATATTGAAGACAAACCCGGTGATGGCTGTGAACCCTTTATTGACACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428432.6
CDS CAA 90 bp TCCCCAAAGGAGGCCATCCTCTATGAAGACTTCTTGTCTTTGATATaGCAGATGGAAGAACCATACAAAGACTTTCTGGCCTTCAACTGC +
Preference number: 6 (lower is better)
Translates to: SPKEAILYEDFLSLI*QMEEPYKDFLAFNC
Trigger: GCAGTTGAAGGCCAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CAA 90 bp AACCTGGGTAGATCCGACTGGACAACACATTTGCCATATTTGTGTTaGGTAGAACAGAGGATCCAAATTGGGAAGGAACGCAAAACTGTC +
Preference number: 6 (lower is better)
Translates to: NLGRSDWTTHLPYLC*VEQRIQIGKERKTV
Trigger: GACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTTCTACCAAACACAAATATGGCAAATGTGTTGTCCAGTCGGATCTACCCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CCA 72 bp GCCATATTTGTGTTTGGTAGAACAGAGGATCCAAATTaGGAAGGAACGCAAAACTGTCTTGGGTCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: AIFVFGRTEDPN*EGTQNCLGSVG
Trigger: TCCAACTGACCCAAGACAGTTTTGCGTTCCTTCCCAATTTGGATCCTCTGTTCTACCAAACACAAATATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 72 bp TTGGTGTCAATAAAGGGTTCACAGCCATCACCGGGTTaGTCTTCAATATCTCTCGCCACTAATGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: LVSIKGSQPSPG*SSISLATNGVL
Trigger: AAGAACTCCATTAGTGGCGAGAGATATTGAAGACAAACCCGGTGATGGCTGTGAACCCTTTATTGACACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000487910.1
CDS CAA 72 bp AGATCCGACTGGACAACACATTTGCCATATTTGTGTTaGGTAGAACAGAGGATCCAAATTGGGAAGGAACGC +
Preference number: 6 (lower is better)
Translates to: RSDWTTHLPYLC*VEQRIQIGKER
Trigger: GCGTTCCTTCCCAATTTGGATCCTCTGTTCTACCAAACACAAATATGGCAAATGTGTTGTCCAGTCGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335556.7
ENST00000428432.6
ENST00000487910.1
CDS CAA 90 bp TTGGAATCCCCAAAGGAGGCCATCCTCTATGAAGACTTCTTGTCTTaGATATTGCAGATGGAAGAACCATACAAAGACTTTCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LESPKEAILYEDFLS*ILQMEEPYKDFLAF
Trigger: GAAGGCCAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CAA 72 bp GAGGCCATCCTCTATGAAGACTTCTTGTCTTTGATATaGCAGATGGAAGAACCATACAAAGACTTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: EAILYEDFLSLI*QMEEPYKDFLA
Trigger: GGCCAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS TCA 72 bp TCTTACTTTGGAATCCCCAAAGGAGGCCATCCTCTATaGAGACTTCTTGTCTTTGATATTGCAGATGGAAGA +
Preference number: 6 (lower is better)
Translates to: SYFGIPKGGHPL*RLLVFDIADGR
Trigger: TCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTCCAAAGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CAA 72 bp GAATCCCCAAAGGAGGCCATCCTCTATGAAGACTTCTaGTCTTTGATATTGCAGATGGAAGAACCATACAAA +
Preference number: 6 (lower is better)
Translates to: ESPKEAILYEDF*SLILQMEEPYK
Trigger: TTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CAA 90 bp CTTACTTTGGAATCCCCAAAGGAGGCCATCCTCTATGAAGACTTCTaGTCTTTGATATTGCAGATGGAAGAACCATACAAAGACTTTCTG +
Preference number: 6 (lower is better)
Translates to: LTLESPKEAILYEDF*SLILQMEEPYKDFL
Trigger: CAGAAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGGGGATTCCAAAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6
CDS CAA 72 bp CCAAAGGAGGCCATCCTCTATGAAGACTTCTTGTCTTaGATATTGCAGATGGAAGAACCATACAAAGACTTT +
Preference number: 6 (lower is better)
Translates to: PKEAILYEDFLS*ILQMEEPYKDF
Trigger: AAAGTCTTTGTATGGTTCTTCCATCTGCAATATCAAAGACAAGAAGTCTTCATAGAGGATGGCCTCCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335556.7
ENST00000428432.6