RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD4B (Homo sapiens)

Ensembl gene IDs: ENSG00000179134

Ensembl transcript IDs: ENST00000314471.10, ENST00000594204.1, ENST00000595476.1, ENST00000596271.1, ENST00000596319.1, ENST00000596368.1, ENST00000598605.1, ENST00000598913.5, ENST00000599712.1, ENST00000600018.1, ENST00000601613.1, ENST00000602243.5, ENST00000610417.4, ENST00000611159.4

Found 841 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCCAGCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTaGCCCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: EPAHPLAVAEKPVGG*PPPAAQGAYGCAGL
Trigger: CAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGCTGGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 90 bp TGGCCCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCCATCACCCAA +
Preference number: 1 (lower is better)
Translates to: WPPPAAQGAYGCAGL*VPSDGGGFVCPITQ
Trigger: TTGGGTGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR CCA 90 bp TGGCCCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCCATCTGTGGT +
Preference number: 1 (lower is better)
Translates to: WPPPAAQGAYGCAGL*VPSDGGGFVCPICG
Trigger: ACCACAGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598605.1
3UTR CCA 90 bp CGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCA +
Preference number: 1 (lower is better)
Translates to: RPGSLWVRWAVGPVR*WRFCLSHHPRRVLS
Trigger: TGACAGAACACGCCTTGGGTGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR TCA 90 bp GGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGGCTGCCCACCTCCAACCTCTTCATC +
Preference number: 1 (lower is better)
Translates to: GCVFVGKGTLRQQTS*PHWLPWLPTSNLFI
Trigger: GATGAAGAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTATGATATAGTGTTCCACTTAAGTGAG +
Preference number: 1 (lower is better)
Translates to: PSLGIGTRQSVGLWG*DESLGYDIVFHLSE
Trigger: CTCACTTAAGTGGAACACTATATCATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTGGGTTATGATATAGTGTTCCACTTA +
Preference number: 1 (lower is better)
Translates to: HNPSLGIGTRQSVGL*GWDESLGYDIVFHL
Trigger: TAAGTGGAACACTATATCATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: GGGSALSPHKVQALPATVGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: PQLLSITFWRAGSLPCASRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACACGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp AGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLWVRWAVGPVRWWRFCLGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...CAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
3UTR-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAGCCTATGGGTGCGCTaGGCTGTGGGTCCCGTCAGA +
Preference number: 2 (lower is better)
Translates to: SPQLLSITFWRAGSLPCASLWVR*AVGPVR
Trigger: TCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR TCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGACGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: ALSPHKVQALPATVLAERRRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRRRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTGCCACTGTCTTGGCTaGGAGAGACCTGGGGATTCT +
Preference number: 2 (lower is better)
Translates to: GGGSALSPHKVQALPATVCHCLG*ERPGDS
Trigger: AGAATCCCCAGGTCTCTCTCAGCCAAGACAGTGGCA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTGCAGGTTCTCTGCCCTaGGCGTCACCCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGAGSLP*ASPQMS
Trigger: TGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGRWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVRWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGRRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATGTCTCTGGGGAGTCTaGTCCCTTGGGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDECLWGV*SLGERQ
Trigger: CTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACA...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CGTCAGATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: RQMVEVLSVPSVVRKGGRRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...CCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
3UTR-3UTR CCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: LSPHKVQALPATVLAERDERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGRWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGGGGAGTCTGCTCCCTTaGGGAGAGGCAGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGGSLLP*GEAGGQ
Trigger: CTGACCACCTGCCTCTCCCCAAGGGAGCAGACTCCC...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTCCTCACTGGCTACCCTaGCTGCCCACCTCCAACCTC +
Preference number: 2 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAPHWLP*LPTSNL
Trigger: GAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGG...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGG +
Preference number: 2 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVRQQTS*PHWLPW
Trigger: CCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: AGSLPCASPQMSNVSEQASLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LSPHKVQALPATVLAERDSLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTGTCTCTGGGGAGTCTaGTCCCTTGGGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LSPHKVQALPATVLAERDCLWGV*SLGERQ
Trigger: CTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGATGGTCAGTTTGTCTCTaGGGAGTCTGCTCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGWSVCL*GVCSLG
Trigger: CCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCA...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTCACCAACCAGACCTaGGAGCGGAGAAGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGLTNQT*ERRRVC
Trigger: ACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAG...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTATTAGAATATATAGCTaGGCCAGCCCACCCTCTCGC +
Preference number: 2 (lower is better)
Translates to: LEENGLELEGLEEGALPSIRIYS*ASPPSR
Trigger: GCGAGAGGGTGGGCTGGCTCAGCTATATATTCTAAT...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTAT +
Preference number: 2 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLVGLWG*DESLGY
Trigger: ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGAC...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp AGATCAGGAGCTGGAGGGAGGCCCAAGAAAAGGCACTCAGGTAGCCTGTCATCCGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: RSGAGGRPKKRHSGSLSSGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...GGATGACAGGCTACCTGAGTGCCTTTTCTTGGGCCTCCCTCCAGCTCCTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598605.1
3UTR-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEVGPVR*WRFCLS
Trigger: GGACAGACAAAACCTCCACCATCTGACGGGACCCAC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR TCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAATTAGAATATATAGCTaGGCCAGCCCACCCTCTCGC +
Preference number: 2 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEIRIYS*ASPPSR
Trigger: GCGAGAGGGTGGGCTGGCTCAGCTATATATTCTAAT...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp GTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCCTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: VKSLRMSQLGRWVEGEEGLSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...GCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGCAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGQSVGL*GWDESL
Trigger: CAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTG...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: LSPHKVQALPATVLAERDGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTCTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: TSNLFIRVARAGGKWVRALSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVRRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR CCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGTGTCCTTGCAGAATGTaGGGAATGGTGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGCPCRM*GMVKGK
Trigger: CTTCCCCTTCACCATTCCCCACATTCTGCAAGGACA...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR TCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGCGAATCTCTGGGTTATaGTATAGTGTTCCACTTAAG +
Preference number: 2 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWRISGL*YSVPLK
Trigger: CTTAAGTGGAACACTATATCATAACCCAGAGATTCG...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 72 bp GCCAGCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTaGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGCCTA +
Preference number: 3 (lower is better)
Translates to: ASPPSRCRGEAR*GLAPARRPGSL
Trigger: TAGGCTCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGCTGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 72 bp TGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGG +
Preference number: 3 (lower is better)
Translates to: WGLAPARRPGSL*VRWAVGPVRWW
Trigger: CCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGGGCCAACCCCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR CAA 90 bp AGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: SLWVRWAVGPVRWWRFCLSRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...CAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR CCA 72 bp CCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: PAAQGAYGCAGL*VPSDGGGFVCP
Trigger: GGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
3UTR-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: SPQLLSITFWRAGSLPCASRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: LSPHKVQALPATVLAERDSRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 72 bp AGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCCCATCACCCAAGGCGT +
Preference number: 3 (lower is better)
Translates to: SLWVRWAVGPVR*WRFCLSHHPRR
Trigger: ACGCCTTGGGTGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
3UTR-3UTR CAA 90 bp GTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: VKSLRMSQLGRWVEGEEGLPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...GCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR TCA 72 bp TTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGGCTGCCCACCTCCAAC +
Preference number: 3 (lower is better)
Translates to: FVGKGTLRQQTS*PHWLPWLPTSN
Trigger: GTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVLPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGLPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 72 bp GGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTATGATATAGTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: GIGTRQSVGLWG*DESLGYDIVFH
Trigger: GTGGAACACTATATCATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR-3UTR CAA 90 bp GATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGGAGGACAGGATGACTCTGAGTaGCTCAGTTCAGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: DGGGFVCPICGKKGRKGGQDDSE*LSSEAE
Trigger: CTCTGCCTCTGAACTGAGCAACTCAGAGTCATCCTG...TCCTCCCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
3UTR TCA 72 bp AACCCAAAAACCAAACAATCCCCTTTCCCTTATTCCTaGCTCCCAAGTCTCACCAACCAGACCTGGGAGCGG +
Preference number: 3 (lower is better)
Translates to: NPKTKQSPFPYS*LPSLTNQTWER
Trigger: CCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAATAAGGGAAAGGGGATTGTTTGGTTTTTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CCA 72 bp TCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTGGGTTATGATATAGTG +
Preference number: 3 (lower is better)
Translates to: SLGIGTRQSVGL*GWDESLGYDIV
Trigger: CACTATATCATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
3UTR CAA 72 bp AGCCAGCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQPTLSLSRRSP*GVGPRPPPREP
Trigger: AGGCTCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGCTGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCCTCGGAACATCATGGTaGCGGGCCTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPALGTSW*RAWGQG
Trigger: ACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAG...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGTGGACCGGGAGCGAGTaGGTGCGCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRPPPREPMGALGCGSRQWTGSE*VRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCA...CTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCACCTGGCCTCCAAGGCTaGGGGGTGAGGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPPGLQG*GVRACR
Trigger: TCGACATGCCCTCACCCCCCAGCCTTGGAGGCCAGG...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCACGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPRRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGTGCGCTGCACAGAGCTaGGGCTCTGACTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: PRPPPREPMGALGCGSRQCAAQS*GSDWAC
Trigger: GCATGCCCAGTCAGAGCCGCAGCTCTGTGCAGCGCA...CTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGATGCAGGAAGCGGGCCTaGGTACGGGTGACCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGCRKRA*VRVTRF
Trigger: GAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCA...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCATGGTAGGAGGGCTCTaGCCGGGAGCGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPAMVGGL*PGAEAT
Trigger: AGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACCAT...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGGGCCTGGGTACGGGTaGCCCGTTTCAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGGPGYG*PVSEVT
Trigger: TGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCC...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGGGCCTGGGTACGGGTaGCCCGTTTCAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPAGPGYG*PVSEVT
Trigger: TGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCC...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGACAGAGCTGCGGCTCTaGCTGGGCATGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRPPPREPMGALGCGSRQTELRL*LGMLLL
Trigger: CAGCAACAGCATGCCCAGTCAGAGCCGCAGCTCTGT...CTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR TCA 90 bp CCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PPAAQGAYGCAGLWVPSDENGLG*RVDRER
Trigger: TCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTC...ATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAACCAGCCAGCGAGGATaGCCACCTGGTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGTSQRG*PPGLGT
Trigger: TGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGT...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGACCGGGAGCGAGTGGGTaGGCTGCACAGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AAQGAYGCAGLWVPSDGGPGASG*AAQSCG
Trigger: GCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGG...TCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGTGGCAACGGTTGTTaGGGGAGGAGGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPGGNGC*GRRKPA
Trigger: AGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACC...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGCCTCTGTGTTGCCTaGCTGAAGCAGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPGLCVA*LKQGKV
Trigger: CACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCC...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGACTGTTACCTTTCCCCTaGGGGCCAGGGCTTAAGGAC +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGLLPFP*GPGLKD
Trigger: GTCCTTAAGCCCTGGCCCTCAGGGGAAAGGTAACAG...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPARQQTS*PHWLPW
Trigger: CCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCT...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCAGGTTCTCTGCCCTaGGCGTCACCCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPAAGSLP*ASPQMS
Trigger: TGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RPPPREPMGALGCGSRQMERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAACTCATTCCAGCCTTTaGACCAGCCAGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGTHSSL*TSQRGC
Trigger: GCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGT...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCCCTTTGGTGACGTTCTaGGACTCCAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPAPLVTF*DSRCCS
Trigger: TGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGG...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGACCTTTGGTGACGTTCTaGGACTCCAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGPLVTF*DSRCCS
Trigger: TGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGG...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGCTGGAGGTAACTGGTaGTGTTCTCCTCGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGAGGNW*CSPRLV
Trigger: GACCAGACGAGGAGAACATCACCAGTTACCTCCAGC...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCATGCCACTGTCTTGGCTaGGAGAGACCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPCHCLG*ERPGDS
Trigger: AGAATCCCCAGGTCTCTCTCAGCCAAGACAGTGGCA...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAGCAGGTGGATGTCATTaGAGTCCGCCAGTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGAGGCH*SPPVSA
Trigger: AGCACTCACTGGCGGACTGCAATGACATCCACCTGC...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCATCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPSLDSC*HWLTMA
Trigger: TGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGA...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGCTGGGGCGAGAGAGGTaGGTGATCGGGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ARRPGSLWVRWAVGPVRWLGRER*VIGRGK
Trigger: TTTACCACGCCCGATCACGCACCTCTCTCGCCCCAG...CCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAQGAYGCAGLWVPSDGGGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...TCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR TCA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGTGGTGGCTGGGTGGATaGGGGCATAGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPPPREPMGALGCGSRQMWWLGG*GHRKAA
Trigger: AGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCA...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAAGCAGCCGTTTCTTCTaGGTCTCCGTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPSSRFF*VSVKAS
Trigger: TGAGGCTTTCACGGAGACGCAGAAGAAACGGCTGCT...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGAAGCAGCCGTTTCTTCTaGGTCTCCGTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LAVAEKPVGGWPPPAAQGSSRFF*VSVKAS
Trigger: TGAGGCTTTCACGGAGACGCAGAAGAAACGGCTGCT...TCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGACTGGGCATGCTGTTaGTGCCTCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RPPPREPMGALGCGSRQMDWACC*CLQGWQ
Trigger: TTGCCAACCCTGGAGGCAGCAACAGCATGCCCAGTC...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGCTCAGGGCTATCTTGTaGCGGGCACCTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: RPPPREPMGALGCGSRQMLRAIL*RAPLVT
Trigger: CGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAG...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATTGGAGCTGGTGGAGGTaGGTAGTTCTCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPAAQGAYGCAGLWVPSDWSWWR*VVLHSW
Trigger: CCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCA...ATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAATGGACCGGGAGCGAGTaGGTGCGCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQWTGSE*VRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCA...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPRSFST*CFQDSS
Trigger: GCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCT...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPARRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTCTGCTCCCTTaGGGAGAGGCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPGSLLP*GEAGGQ
Trigger: CTGACCACCTGCCTCTCCCCAAGGGAGCAGACTCCC...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCCTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPALSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAGGCGGGCACCTTTGGTaGCGTTCTGAGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQGGHLW*RSETPG
Trigger: ACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCC...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAGGGGAGACCTGTGTTTaGATTGCTCCCAATACTGTT +
Preference number: 4 (lower is better)
Translates to: PSRCRGEARWGLAPARRPGETCV*IAPNTV
Trigger: AACAGTATTGGGAGCAATGCAAACACAGGTCTCCCC...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTTGTCTCTGGGGAGTCTaGTCCCTTGGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPCLWGV*SLGERQ
Trigger: CTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACA...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAGGTGGCAACGGTTGTTaGGGGAGGAGGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQGGNGC*GRRKPA
Trigger: AGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACC...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAACATGGTCCCGGCTCTaGCCTCCTGTTACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AAQGAYGCAGLWVPSDGGTWSRL*PPVTFP
Trigger: GGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGT...TCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVASAVT*SRLWPP
Trigger: AGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGC...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGTCCGACTCCAGCAGGTaGATGTCATTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PPREPMGALGCGSRQMVESDSSR*MSLQSA
Trigger: GGCGGACTGCAATGACATCCACCTGCTGGAGTCGGA...CTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ARRPGSLWVRWAVGPVRWSCTPT*PLCCLA
Trigger: AGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGA...CCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTCCACTGCCATCCTCCTaGAAGGTGTTCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPPLPSS*KVFRLE
Trigger: CTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGG...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTGGGAGGCTCAGCACCTaGCAGCGGTGGTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGGRLST*QRWFPR
Trigger: CCGGGGGAACCACCGCTGCCAGGTGCTGAGCCTCCC...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAACTGTTACCTTTCCCCTaGGGGCCAGGGCTTAAGGAC +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQLLPFP*GPGLKD
Trigger: GTCCTTAAGCCCTGGCCCTCAGGGGAAAGGTAACAG...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAATGGTGGCTGGGTGGATaGGGGCATAGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQWWLGG*GHRKAA
Trigger: AGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCA...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACGGGGTGGCTTGTCCTaGCAGCCTGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASRGGLS*QPGPAS
Trigger: GGAGGCAGGGCCAGGCTGGCAGGACAAGCCACCCCG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGATGATGATCTGCTaGAGCTCCTGCAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: RPPPREPMGALGCGSRQMVMMIC*SSCRAF
Trigger: AAACGCTCTGCAGGAGCTGCAGCAGATCATCATCAC...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCGGGAGCGAGTGGGTaGGCTGCACAGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASPGASG*AAQSCG
Trigger: GCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAACATGGTCCCGGCTCTaGCCTCCTGTTACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQTWSRL*PPVTFP
Trigger: GGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGT...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSSWCRA*GQGRGT
Trigger: CGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGA...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTCACTCACCAGGGACCTaGGGGCTTGTAGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPHSPGT*GLVGMS
Trigger: ACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTG...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSAWGDE*TGSEWV
Trigger: CACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGC...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAGCAAACGGAGGCTCTTaGGCCATGAGGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQANGGS*AMRAHL
Trigger: AAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGC...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGENGLG*RVDRER
Trigger: TCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTC...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPRRATV*SHSFQP
Trigger: AGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAATCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQSLDSC*HWLTMA
Trigger: TGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGA...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCGGGGTGGCTTGTCCTaGCAGCCTGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRRGGLS*QPGPAS
Trigger: GGAGGCAGGGCCAGGCTGGCAGGACAAGCCACCCCG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGACGGGGTGGCTTGTCCTaGCAGCCTGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERRGGLS*QPGPAS
Trigger: GGAGGCAGGGCCAGGCTGGCAGGACAAGCCACCCCG...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGACCGGGAGCGAGTGGGTaGGCTGCACAGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGPGASG*AAQSCG
Trigger: GCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGG...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGCAGGGAAAGAGGAAATaGTCACCACCCAAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: PPREPMGALGCGSRQMVEQGKRK*SPPKAC
Trigger: ACACGCCTTGGGTGGTGAGCATTTCCTCTTTCCCTG...CTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTASAVT*SRLWPP
Trigger: AGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGC...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCTCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTSWCRA*GQGRGT
Trigger: CGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGA...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSESWCRA*GQGRGT
Trigger: CGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLSWCRA*GQGRGT
Trigger: CGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTGGCCCCAAGCTCCTCTaGACTCGGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGGPKLL*TRPLTR
Trigger: CCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGGGGCC...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGGAGGCTCAGCACCTaGCAGCGGTGGTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGRLST*QRWFPR
Trigger: CCGGGGGAACCACCGCTGCCAGGTGCTGAGCCTCCC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGTCTGTGCCGGGGTaGGCTAGGGGAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVLSVPG*ARGGSA
Trigger: TGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTAGGTTCTGTCGGCCCTaGCCTCCAAGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPMGALGCGSRQMVEVLSRFCRP*PPRLGL
Trigger: CAGCCCCAGCCTTGGAGGCCAGGGCCGACAGAACCT...AGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSAWGDE*TGSEWV
Trigger: CACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGC...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAAWGDE*TGSEWV
Trigger: CACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGC...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGGACCCCTCAGGATGACTCTGAGTTGCTCAGTTCAGAGGCAGAGACGCTGGGTCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GTPQDDSELLSSEAETLGRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...ACCCAGCGTCTCTGCCTCTGAACTGAGCAACTCAGAGTCATCCTGAGGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAGGCGACTCTCCTCGATaGAAGCATTGCTCTCGATTG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQGDSPR*KHCSRL
Trigger: CAATCGAGAGCAATGCTTTCATCGAGGAGAGTCGCC...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTDGWRH*AGWVEG
Trigger: CCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATC...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGACTCGTAGCTCATCTGTaGGAAGAGGGCTGCATACTT +
Preference number: 4 (lower is better)
Translates to: AAQGAYGCAGLWVPSDGGLVAHL*EEGCIL
Trigger: AAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAG...TCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCTCGGAACATCATGGTaGCGGGCCTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTLGTSW*RAWGQG
Trigger: ACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACAGAGGAGGCCACGCTaGTCTGGGGCGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASQRRPR*SGAREV
Trigger: CACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCAGAGGAGGCCACGCTaGTCTGGGGCGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTQRRPR*SGAREV
Trigger: CACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCCGGGGCAGGCTCACTaGCATCAGTGGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTPGQAH*HQWELE
Trigger: CTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCGGGGCAGGCTCACTaGCATCAGTGGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASPGQAH*HQWELE
Trigger: CTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGGAGGCATTGGGAACTaGCGCTGGGTACGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSGGIGN*RWVRRA
Trigger: GGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTCCGGGAGCGAGTGGGTaGGCTGCACAGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVPGASG*AAQSCG
Trigger: GCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGG...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVGSLLT*GEVLVQ
Trigger: CTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCC...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTGCAGGAAGCGGGCCTaGGTACGGGTGACCCGTTTC +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGCRKRA*VRVTRF
Trigger: GAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCA...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTGGCCCCAAGCTCCTCTaGACTCGGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSGPKLL*TRPLTR
Trigger: CCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGGGGCC...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGGGAGGCTCAGCACCTaGCAGCGGTGGTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDGRLST*QRWFPR
Trigger: CCGGGGGAACCACCGCTGCCAGGTGCTGAGCCTCCC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAGGTTCTGTCGGCCCTaGCCTCCAAGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCARFCRP*PPRLGL
Trigger: CAGCCCCAGCCTTGGAGGCCAGGGCCGACAGAACCT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
CDS-3UTR CCA 90 bp GGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GLWVPSDGGGFVCPICGKAWGDE*TGSEWV
Trigger: CACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGC...CTTACCACAGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR TCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCTGCTGCCACTGGCTaGCGATGGCAGCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASPAATG*RWQHCW
Trigger: CCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAAGCATTGCTCTCGATTaGGTAGGCCAGCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQSIALD*VGQHFL
Trigger: CAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCT...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSDGWRH*AGWVEG
Trigger: CCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWDGWRH*AGWVEG
Trigger: CCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATC...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASPLSAH*QRRPRC
Trigger: GCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGCCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAPLSAH*QRRPRC
Trigger: GCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGG...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTTCCGGCTGGAGCCCTaGTCCTCTGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGFRLEP*SSVCSL
Trigger: CAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAA...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAACGGTGCCTTTGTCTGTaGCGGGGTGGGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDERCLCL*RGGLGE
Trigger: CTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCG...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGCGGTGCCTTTGTCTGTaGCGGGGTGGGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWRCLCL*RGGLGE
Trigger: CTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCG...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCGAGTTGGAGCCGAATaGCCAGCCTTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: AYGCAGLWVPSDGGGFVCRVGAE*PAFLLP
Trigger: CGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCG...ACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATGCGCTGCACAGAGCTaGGGCTCTGACTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASCAAQS*GSDWAC
Trigger: GCATGCCCAGTCAGAGCCGCAGCTCTGTGCAGCGCA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACCGGGAGCGAGTGGGTaGGCTGCACAGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVPGASG*AAQSCG
Trigger: GCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGSLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAACTAGTATCAACACCCTaGGTTCCCCTTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQLVSTP*VPLGEG
Trigger: TCCTTCTCCAAGGGGAACCCAGGGTGTTGATACTAG...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYASAVT*SRLWPP
Trigger: AGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGC...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGGGGTCTCGGAACATCATaGTGCCGGGCCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PITQGVFCHAQTQRLQSGGLGTS*CRAWGQ
Trigger: CTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACC...CCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGATGGTAGGAGGGCTCTaGCCGGGAGCGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAMVGGL*PGAEAT
Trigger: AGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACCAT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTTCCATTTTCCCGGGGTaGCTTGTCCTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPMGALGCGSRQMVEVLSSIFPG*LVLPAW
Trigger: CCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGA...AGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAGGCCCCAAGCTCCTCTaGACTCGGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEGPKLL*TRPLTR
Trigger: CCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGGGGCC...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTGGAAGGTGTTCCGGCTaGAGCCCTGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGGRCSG*SPAPLS
Trigger: AGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCC...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCGGAAGGTGTTCCGGCTaGAGCCCTGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PMGALGCGSRQMVEVLSVGRCSG*SPAPLS
Trigger: AGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCC...GACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGGAGGCTCAGCACCTaGCAGCGGTGGTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSGRLST*QRWFPR
Trigger: CCGGGGGAACCACCGCTGCCAGGTGCTGAGCCTCCC...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGTTCTGTCGGCCCTaGCCTCCAAGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSRFCRP*PPRLGL
Trigger: CAGCCCCAGCCTTGGAGGCCAGGGCCGACAGAACCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAGCCTATGGGTGCGCTaGGCTGTGGGTCCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASSLWVR*AVGPVR
Trigger: TCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASRWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGACAGAGCTGCGGCTCTaGCTGGGCATGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCATELRL*LGMLLL
Trigger: CAGCAACAGCATGCCCAGTCAGAGCCGCAGCTCTGT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTACAGAGCTGCGGCTCTaGCTGGGCATGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTTELRL*LGMLLL
Trigger: CAGCAACAGCATGCCCAGTCAGAGCCGCAGCTCTGT...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYENGLG*RVDRER
Trigger: TCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTC...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTACTCCAGAGTGGGATTaGTCTCCAGGTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EPMGALGCGSRQMVEVLSTPEWD*SPGQAQ
Trigger: CTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGT...AGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACCTCGGAACATCATGGTaGCGGGCCTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDLGTSW*RAWGQG
Trigger: ACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAG...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTACCAGCCAGCGAGGATaGCCACCTGGTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTTSQRG*PPGLGT
Trigger: TGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGT...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGCAGCCAGAGGGCCAGTaGGTTGCGGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVQPEGQ*VAVLQC
Trigger: ACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTG...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGACAGCCAGAGGGCCAGTaGGTTGCGGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGQPEGQ*VAVLQC
Trigger: ACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTG...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCGGGGTGGCTTGTCCTaGCAGCCTGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGRGGLS*QPGPAS
Trigger: GGAGGCAGGGCCAGGCTGGCAGGACAAGCCACCCCG...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCTGGGGCGAGAGAGGTaGGTGATCGGGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTLGRER*VIGRGK
Trigger: TTTACCACGCCCGATCACGCACCTCTCTCGCCCCAG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTCAGAGGAGGCCACGCTaGTCTGGGGCGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAQRRPR*SGAREV
Trigger: CACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTG...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGACCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERPLSAH*QRRPRC
Trigger: GCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGG...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCCACGCAGCTTCTGGATaGTCAGGGCTATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVHAASG*SGLSCG
Trigger: GCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTG...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGGAGGCATTGGGAACTaGCGCTGGGTACGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVGGIGN*RWVRRA
Trigger: GGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp AGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGGACTGGGCATGCTGTTaGTGCCTCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLWVRWAVGPVRWWRFCLDWACC*CLQGWQ
Trigger: TTGCCAACCCTGGAGGCAGCAACAGCATGCCCAGTC...CAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATGTCTCTGGGGAGTCTaGTCCCTTGGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASCLWGV*SLGERQ
Trigger: CTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCGCAGGTTCTCTGCCCTaGGCGTCACCCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSAGSLP*ASPQMS
Trigger: TGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSGSLLT*GEVLVQ
Trigger: CTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCC...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACACGTTTCTGGGCGTGGTaGCAACGGTTGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTRFWAW*QRLLGE
Trigger: CTCCCCCAACAACCGTTGCCACCACGCCCAGAAACG...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGTCTCGGAACATCATaGTGCCGGGCCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLGLGTS*CRAWGQ
Trigger: CTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACC...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTGGTCTCGGAACATCATaGTGCCGGGCCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAGLGTS*CRAWGQ
Trigger: CTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACC...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCANRSSR*LSQRAS
Trigger: ACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATTGTCTGTGCCGGGGTaGGCTAGGGGAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDELSVPG*ARGGSA
Trigger: TGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAA...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGTTGTCTGTGCCGGGGTaGGCTAGGGGAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVLSVPG*ARGGSA
Trigger: TGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAA...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTCAGCTGGAGGGTCCTTaGCCTCGGTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSQLEGP*PRCLCL
Trigger: CAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACAGCTGGAGGGTCCTTaGCCTCGGTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASQLEGP*PRCLCL
Trigger: CAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTCTATGGGGAGCGAGTTaGAGCCGAATGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: EPMGALGCGSRQMVEVLSLWGAS*SRMPSL
Trigger: AAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAG...AGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAIGNCR*VRRATP
Trigger: GGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAAT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYIGNCR*VRRATP
Trigger: GGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAAT...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTAGGTTCTGTCGGCCCTaGCCTCCAAGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRARFCRP*PPRLGL
Trigger: CAGCCCCAGCCTTGGAGGCCAGGGCCGACAGAACCT...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000610417.4
CDS-3UTR CCA 90 bp GGGACCCCTCAGGATGACTCTGAGTTGCTCAGTTCAGAGGCAGAGACGCTGGGTAGCTGCGGCTCTGACTaGGCATGCTGTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTPQDDSELLSSEAETLGSCGSD*ACCCCL
Trigger: GAGGCAGCAACAGCATGCCCAGTCAGAGCCGCAGCT...ACCCAGCGTCTCTGCCTCTGAACTGAGCAACTCAGAGTCATCCTGAGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTGGACCGGGAGCGAGTaGGTGCGCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQWTGSE*VRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTGGACCGGGAGCGAGTaGGTGCGCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYWTGSE*VRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCAACATGAGAATGGCCTaGGGTGACGAGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: PMGALGCGSRQMVEVLSVNMRMA*GDEWTG
Trigger: CCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTT...GACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCAACATGAGAATGGCCTaGGGTGACGAGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSNMRMA*GDEWTG
Trigger: CCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTT...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGATCAGGAGCTGGAGGGAGGCCCAAGAAAAGGCACTCAGGTAGCCTGTCATCCAGCCTATGGGTGCGCTaGGCTGTGGGTCCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: RSGAGGRPKKRHSGSLSSSLWVR*AVGPVR
Trigger: TCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT...GGATGACAGGCTACCTGAGTGCCTTTTCTTGGGCCTCCCTCCAGCTCCTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCCTATGGGTGCGCTaGGCTGTGGGTCCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSSLWVR*AVGPVR
Trigger: TCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCCGCCCAGGGAGCCTATaGGTGCGCTGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LSVPSPKACSVMLRHRDSRPGSL*VRWAVG
Trigger: ACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCG...GGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGAGAGGCAGGCAGTCTaGCCAGTCCCTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGERQAV*PVPAPF
Trigger: AAAGGGGGCAGGGACTGGCCAGACTGCCTGCCTCTC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDERWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSRWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGGTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PITQGVFCHAQTQRLQSGLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...CCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGGGAGTCTGCTCCCTTaGGGAGAGGCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSGSLLP*GEAGGQ
Trigger: CTGACCACCTGCCTCTCCCCAAGGGAGCAGACTCCC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGCCTCACTGGCTACCCTaGCTGCCCACCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWPHWLP*LPTSNL
Trigger: GAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGG...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCCTCACTGGCTACCCTaGCTGCCCACCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSPHWLP*LPTSNL
Trigger: GAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACTGTTACCTTTCCCCTaGGGGCCAGGGCTTAAGGAC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASLLPFP*GPGLKD
Trigger: GTCCTTAAGCCCTGGCCCTCAGGGGAAAGGTAACAG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTGACCCGTTTCAGAAGTaGCAGGAGGGCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTDPFQK*QEGHCL
Trigger: CAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTC...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGTCTGTGTTGCCTGGCTaGAGCAGGGGAAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVSVLPG*SRGRWD
Trigger: GTCCCACCTTCCCCTGCTTCAGCCAGGCAACACAGA...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGGCGGGCACCTTTGGTaGCGTTCTGAGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSGGHLW*RSETPG
Trigger: ACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGCGGGCACCTTTGGTaGCGTTCTGAGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGGHLW*RSETPG
Trigger: ACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSENGLG*RVDRER
Trigger: TCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTC...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTAAATGGGTTAGAGCTTaGGGGTCTGGAGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSKWVRA*GSGGGG
Trigger: GCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTT...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCARQQTS*PHWLPW
Trigger: CCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSRRATV*SHSFQP
Trigger: AGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCT...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGAGAGGGCCAGTGCGTTaGGGTCCTCCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLRGPVR*GPPVWW
Trigger: CCACCACACTGGAGGACCGCAACGCACTGGCCCTCT...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAGAGGGCCAGTGCGTTaGGGTCCTCCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHRGPVR*GPPVWW
Trigger: CCACCACACTGGAGGACCGCAACGCACTGGCCCTCT...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCCAGAGGGCCAGTaGGTTGCGGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEQPEGQ*VAVLQC
Trigger: ACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTG...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACAGAGGAGGCCACGCTaGTCTGGGGCGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVQRRPR*SGAREV
Trigger: CACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAPLSAH*QRRPRC
Trigger: GCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACGGTGCCTTTGTCTGTaGCGGGGTGGGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVRCLCL*RGGLGE
Trigger: CTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGGAGGCATTGGGAACTaGCGCTGGGTACGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGGGIGN*RWVRRA
Trigger: GGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCC...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGGACTGGGCATGCTGTTaGTGCCTCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCADWACC*CLQGWQ
Trigger: TTGCCAACCCTGGAGGCAGCAACAGCATGCCCAGTC...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTGCGCTGCACAGAGCTaGGGCTCTGACTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYCAAQS*GSDWAC
Trigger: GCATGCCCAGTCAGAGCCGCAGCTCTGTGCAGCGCA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERSLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTGTCTCTGGGGAGTCTaGTCCCTTGGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSCLWGV*SLGERQ
Trigger: CTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACA...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGGAGGGCAGGTTCTCTaGCCTGCGCGTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDGGQVL*PARHPK
Trigger: TTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCCTGGAGAGGACTGGATaGCCCTCTTCCATTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVLERTG*PSSIKG
Trigger: CCCTTTAATGGAAGAGGGCCATCCAGTCCTCTCCAG...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTATGAGAAGAATCCTGTaGTCCTTGGAACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPMRRIL*SLEQKS
Trigger: GCTCTTCTGTTCCAAGGACCACAGGATTCTTCTCAT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAGGACGTTTCTGGGCGTaGTGGCAACGGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEGRFWA*WQRLLG
Trigger: CCCCAACAACCGTTGCCACCACGCCCAGAAACGTCC...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATCCGACTCCAGCAGGTaGATGTCATTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASSDSSR*MSLQSA
Trigger: GGCGGACTGCAATGACATCCACCTGCTGGAGTCGGA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCGATGGCAGCACTGTTaGCCTCCGACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRRWQHC*PPTPAG
Trigger: ACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGGCCTCTGTGTTGCCTaGCTGAAGCAGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSGLCVA*LKQGKV
Trigger: CACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGCCTCTGTGTTGCCTaGCTGAAGCAGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGLCVA*LKQGKV
Trigger: CACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVSCTPT*PLCCLA
Trigger: AGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGATGGTAGGAGGGCTCTaGCCGGGAGCGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQMVGGL*PGAEAT
Trigger: AGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACCAT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTCCATTTTCCCGGGGTaGCTTGTCCTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSSIFPG*LVLPAW
Trigger: CCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGA...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTTCAGTGGGCTAGGGTaGATTTGGCAGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGFSGLG*IWQGRP
Trigger: AGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGAA...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGACCACTGCCATCCTCCTaGAAGGTGTTCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGPLPSS*KVFRLE
Trigger: CTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGG...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCCACTGCCATCCTCCTaGAAGGTGTTCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRPLPSS*KVFRLE
Trigger: CTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCAGCTGGAGGGTCCTTaGCCTCGGTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSQLEGP*PRCLCL
Trigger: CAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACTATGGGGAGCGAGTTaGAGCCGAATGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASLWGAS*SRMPSL
Trigger: AAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: CLSHHPRRVLSCSDTETPIGNCR*VRRATP
Trigger: GGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAAT...TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCTGCGGCTCTGACTaGGCATGCTGTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSSCGSD*ACCCCL
Trigger: GAGGCAGCAACAGCATGCCCAGTCAGAGCCGCAGCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAACATGAGAATGGCCTaGGGTGACGAGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCANMRMA*GDEWTG
Trigger: CCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTAGGAACCGGGCAGTCTaGAGGGAACATGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGRNRAV*REHENG
Trigger: GCCATTCTCATGTTCCCTCCAGACTGCCCGGTTCCT...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGAGGTGGTCAGCGGTCTaGAGGAGGCAGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSERWSAV*RRQGWD
Trigger: ATCCCACCCCTGCCTCCTCCAGACCGCTGACCACCT...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACATCCCTGCCACTGTCTTaGCTGAGAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTSLPLS*LRETWG
Trigger: TCCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGA...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGCCTCACTGGCTACCCTaGCTGCCCACCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: SHHPRRVLSCSDTETPEWPHWLP*LPTSNL
Trigger: GAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGG...CCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCACTCACCAACCAGACCTaGGAGCGGAGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASLTNQT*ERRRVC
Trigger: ACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAG...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSVGLWG*DESLGY
Trigger: ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGAC...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGAGAGGGAGACCTGGGTaGGGCATCTCACTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSERGRPG*GISLWQ
Trigger: CTGCCACAGTGAGATGCCTCACCCAGGTCTCCCTCT...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR TCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTTCCCATGTGCTTGGCTaGAGTGACAGAGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSSHVLG*SDRGRP
Trigger: AGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGA...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR TCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGACTCATTCCAGCCTTTaGACCAGCCAGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCATHSSL*TSQRGC
Trigger: GCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGGGGCCTGGGTACGGGTaGCCCGTTTCAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGGPGYG*PVSEVT
Trigger: TGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCC...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGGGCCTGGGTACGGGTaGCCCGTTTCAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEGPGYG*PVSEVT
Trigger: TGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTCTGTGTTGCCTGGCTaGAGCAGGGGAAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYSVLPG*SRGRWD
Trigger: GTCCCACCTTCCCCTGCTTCAGCCAGGCAACACAGA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTCTGTGTTGCCTGGCTaGAGCAGGGGAAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDSVLPG*SRGRWD
Trigger: GTCCCACCTTCCCCTGCTTCAGCCAGGCAACACAGA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRCSQYC*WLAALS
Trigger: GCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCA...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASACRDE*HGALQW
Trigger: CCACTGAAGCGCTCCATGTCACTCATCCCTACAAGC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGGCGAGAGAGGTGCGTaGTCGGGCGTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEGERGA*SGVVKA
Trigger: TGCTTTTACCACGCCCGATCACGCACCTCTCTCGCC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGGCGAGAGAGGTGCGTaGTCGGGCGTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQGERGA*SGVVKA
Trigger: TGCTTTTACCACGCCCGATCACGCACCTCTCTCGCC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCGGCGAGAGAGGTGCGTaGTCGGGCGTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTGERGA*SGVVKA
Trigger: TGCTTTTACCACGCCCGATCACGCACCTCTCTCGCC...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCCTTTGGTGACGTTCTaGGACTCCAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTPLVTF*DSRCCS
Trigger: TGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGGCGGGCACCTTTGGTaGCGTTCTGAGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHGGHLW*RSETPG
Trigger: ACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LWVPSDGGGFVCPICGKKENGLG*RVDRER
Trigger: TCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTC...TTTCTTACCACAGATGGGACAGACAAAACCTCCACCATCTGACGGGACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR TCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAACTCCAGAGTGGGATTaGTCTCCAGGTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGTPEWD*SPGQAQ
Trigger: CTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGT...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACATGCCACTGTCTTGGCTaGGAGAGACCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTCHCLG*ERPGDS
Trigger: AGAATCCCCAGGTCTCTCTCAGCCAAGACAGTGGCA...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAAAATGGGTTAGAGCTTaGGGGTCTGGAGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEKWVRA*GSGGGG
Trigger: GCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTT...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTACCAGCCAGCGAGGATaGCCACCTGGTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQATSQRG*PPGLGT
Trigger: TGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTGCAGGTGGATGTCATTaGAGTCCGCCAGTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTAGGCH*SPPVSA
Trigger: AGCACTCACTGGCGGACTGCAATGACATCCACCTGC...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAACTTGGCCTCTGTGTTaGCTGGCTGAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASTWPLC*LAEAGE
Trigger: TTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTAGAGGGCCAGTGCGTTaGGGTCCTCCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSRGPVR*GPPVWW
Trigger: CCACCACACTGGAGGACCGCAACGCACTGGCCCTCT...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTCAGCCAGAGGGCCAGTaGGTTGCGGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSQPEGQ*VAVLQC
Trigger: ACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTG...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGGAGTGATGATGATCTaGTGCAGCTCCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTGVMMI*CSSCRA
Trigger: CGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCC...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGCGGTGCCTTTGTCTGTaGCGGGGTGGGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGRCLCL*RGGLGE
Trigger: CTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCG...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGATCTCTAGTGCGGCTTTaGGCGGGAATGTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGSLVRL*AGMSGG
Trigger: TCCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGA...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACCGAGTTGGAGCCGAATaGCCAGCCTTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHRVGAE*PAFLLP
Trigger: CGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCG...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAGCAGGTTCTCTGCCCTaGGCGTCACCCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEAGSLP*ASPQMS
Trigger: TGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAGSLLT*GEVLVQ
Trigger: CTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCC...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCGGTGGCAACGGTTGTTaGGGGAGGAGGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTGGNGC*GRRKPA
Trigger: AGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACC...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTGGTGGCAACGGTTGTTaGGGGAGGAGGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAGGNGC*GRRKPA
Trigger: AGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACC...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCCGTTTCTGGGCGTGGTaGCAACGGTTGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTRFWAW*QRLLGE
Trigger: CTCCCCCAACAACCGTTGCCACCACGCCCAGAAACG...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGGACGTTTCTGGGCGTaGTGGCAACGGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDGRFWA*WQRLLG
Trigger: CCCCAACAACCGTTGCCACCACGCCCAGAAACGTCC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTGGACGTTTCTGGGCGTaGTGGCAACGGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAGRFWA*WQRLLG
Trigger: CCCCAACAACCGTTGCCACCACGCCCAGAAACGTCC...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCACATGGTCCCGGCTCTaGCCTCCTGTTACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSTWSRL*PPVTFP
Trigger: GGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSASAVT*SRLWPP
Trigger: AGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGC...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGGCGAGGATGCCCACCTaGTCTCGGAACATCATGGTG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRARMPT*SRNIMV
Trigger: CACCATGATGTTCCGAGACCAGGTGGGCATCCTCGC...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTATGCAGGAAGCGGGCCTaGGTACGGGTGACCCGTTTC +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVCRKRA*VRVTRF
Trigger: GAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCA...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCCGATGGCAGCACTGTTaGCCTCCGACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTRWQHC*PPTPAG
Trigger: ACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCG...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCGATGGCAGCACTGTTaGCCTCCGACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQARWQHC*PPTPAG
Trigger: ACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGGCCTCTGTGTTGCCTaGCTGAAGCAGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHGLCVA*LKQGKV
Trigger: CACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQNRSSR*LSQRAS
Trigger: ACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTCCATTTTCCCGGGGTaGCTTGTCCTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYSIFPG*LVLPAW
Trigger: CCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCATGGAGCGCTTCAGTaGGCTAGGGTGGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTHGALQ*ARVDLA
Trigger: TGCCAAATCCACCCTAGCCCACTGAAGCGCTCCATG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGACACTCACCAGGGACCTaGGGGCTTGTAGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERHSPGT*GLVGMS
Trigger: ACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTG...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGGAAGGTGTTCCGGCTaGAGCCCTGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQGRCSG*SPAPLS
Trigger: AGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTCCACTGCCATCCTCCTaGAAGGTGTTCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAPLPSS*KVFRLE
Trigger: CTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGG...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATGGAGCTGGTGGAGGTaGGTAGTTCTCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEWSWWR*VVLHSW
Trigger: CCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCA...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGATGGAGCTGGTGGAGGTaGGTAGTTCTCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGWSWWR*VVLHSW
Trigger: CCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCA...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATGGGAGCTGGAGCTGGTaGAGGTGGGTAGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYGSWSW*RWVVLH
Trigger: GTGGAGAACTACCCACCTCCACCAGCTCCAGCTCCC...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGGGAGCTGGAGCTGGTaGAGGTGGGTAGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEGSWSW*RWVVLH
Trigger: GTGGAGAACTACCCACCTCCACCAGCTCCAGCTCCC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTGGGAGCTGGAGCTGGTaGAGGTGGGTAGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAGSWSW*RWVVLH
Trigger: GTGGAGAACTACCCACCTCCACCAGCTCCAGCTCCC...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTAGCTGCGGCTCTGACTaGGCATGCTGTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRASCGSD*ACCCCL
Trigger: GAGGCAGCAACAGCATGCCCAGTCAGAGCCGCAGCT...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTTGGACCGGGAGCGAGTaGGTGCGCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGWTGSE*VRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCA...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEAWGDE*TGSEWV
Trigger: CACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGGACCCCTCAGGATGACTCTGAGTTGCTCAGTTCAGAGGCAGAGACGCTGGGTAGGAACCGGGCAGTCTaGAGGGAACATGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: GTPQDDSELLSSEAETLGRNRAV*REHENG
Trigger: GCCATTCTCATGTTCCCTCCAGACTGCCCGGTTCCT...ACCCAGCGTCTCTGCCTCTGAACTGAGCAACTCAGAGTCATCCTGAGGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp GCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AYGCAGLWVPSDGGGFVCGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...ACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598605.1
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASVGPVR*WRFCLS
Trigger: GGACAGACAAAACCTCCACCATCTGACGGGACCCAC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGGAGGAGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: DGGGFVCPICGKKGRKGGGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...TCCTCCCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGGGTGCGCTGGGCTGTaGGTCCCGTCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGGCAGL*VPSDGG
Trigger: TCCACCATCTGACGGGACCCACAGCCCAGCGCACCC...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTAGCCTATGGGTGCGCTaGGCTGTGGGTCCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSSLWVR*AVGPVR
Trigger: TCTGACGGGACCCACAGCCCAGCGCACCCATAGGCT...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATGGTCAGTTTGTCTCTaGGGAGTCTGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASWSVCL*GVCSLG
Trigger: CCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTGTCCTTGCAGAATGTaGGGAATGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVCPCRM*GMVKGK
Trigger: CTTCCCCTTCACCATTCCCCACATTCTGCAAGGACA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCTCACCAACCAGACCTaGGAGCGGAGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSLTNQT*ERRRVC
Trigger: ACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRQSVGL*GWDESL
Trigger: CAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGCCTGGAGCACTGCGATaGGAAGAATCCTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWPGALR*EESCGP
Trigger: AGGACCACAGGATTCTTCTCATCGCAGTGCTCCAGG...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCTGTTACCTTTCCCCTaGGGGCCAGGGCTTAAGGAC +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQLLPFP*GPGLKD
Trigger: GTCCTTAAGCCCTGGCCCTCAGGGGAAAGGTAACAG...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGACCCGTTTCAGAAGTaGCAGGAGGGCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQDPFQK*QEGHCL
Trigger: CAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGCCTGCTGCCACTGGCTaGCGATGGCAGCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGPAATG*RWQHCW
Trigger: CCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGG...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTTGGTGGCTGGGTGGATaGGGGCATAGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAWWLGG*GHRKAA
Trigger: AGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCA...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTGGTGGCTGGGTGGATaGGGGCATAGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQWWLGG*GHRKAA
Trigger: AGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSDGWRH*AGWVEG
Trigger: CCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATC...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLCSQYC*WLAALS
Trigger: GCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSECSQYC*WLAALS
Trigger: GCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGAGGCTCTTGAGCCATaGGGGCACATCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSEALEP*GHIFHA
Trigger: GGCATGAAAGATGTGCCCTCATGGCTCAAGAGCCTC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGGAGGCTCTTGAGCCATaGGGGCACATCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCREALEP*GHIFHA
Trigger: GGCATGAAAGATGTGCCCTCATGGCTCAAGAGCCTC...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGCAAACGGAGGCTCTTaGGCCATGAGGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWANGGS*AMRAHL
Trigger: AAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGC...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAGCTGGAGGTAACTGGTaGTGTTCTCCTCGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEAGGNW*CSPRLV
Trigger: GACCAGACGAGGAGAACATCACCAGTTACCTCCAGC...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTTCTGCGTCTCCGTaGAAGCCTCATGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDESSASP*KPHESG
Trigger: GCCTGACTCATGAGGCTTTCACGGAGACGCAGAAGA...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGACTCCAGAGTGGGATTaGTCTCCAGGTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSETPEWD*SPGQAQ
Trigger: CTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGT...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGACTCCAGAGTGGGATTaGTCTCCAGGTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQTPEWD*SPGQAQ
Trigger: CTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACAAATGGGTTAGAGCTTaGGGGTCTGGAGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDKWVRA*GSGGGG
Trigger: GCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTT...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTAGGCAACAGACTTCCTaGCCTCACTGGCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVRQQTS*PHWLPW
Trigger: CCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCT...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAACGAATCTCTGGGTTATaGTATAGTGTTCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQRISGL*YSVPLK
Trigger: CTTAAGTGGAACACTATATCATAACCCAGAGATTCG...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCGGGCCAGAGGCCGCCTaGTACTTTCTATCCCATGTG +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTGPEAA*YFLSHV
Trigger: CACATGGGATAGAAAGTAGCAGGCGGCCTCTGGCCC...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCTCGGAACATCATGGTaGCGGGCCTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSLGTSW*RAWGQG
Trigger: ACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAG...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGCAGGTGGATGTCATTaGAGTCCGCCAGTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSAGGCH*SPPVSA
Trigger: AGCACTCACTGGCGGACTGCAATGACATCCACCTGC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAFSLDS*CHWLTM
Trigger: CATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAA...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATG +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSFSLDS*CHWLTM
Trigger: CATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAA...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGAGAGGGCCAGTGCGTTaGGGTCCTCCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQRGPVR*GPPVWW
Trigger: CCACCACACTGGAGGACCGCAACGCACTGGCCCTCT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTATTCCGGCTGGAGCCCTaGTCCTCTGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVFRLEP*SSVCSL
Trigger: CAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAA...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAGGGCACATCTTTCATaGCACTGCCATCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASRAHLS*HCHPPG
Trigger: TCCAGGAGGATGGCAGTGGCATGAAAGATGTGCCCT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTAGGGCTGCATACTTGTaGAAACGGAGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTRAAYL*KRRLLS
Trigger: GCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCT...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGGGAGTGATGATGATCTaGTGCAGCTCCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVGVMMI*CSSCRA
Trigger: CGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCC...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PMGALGCGSRQMVEVLSVRSFST*CFQDSS
Trigger: GCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCT...GACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTCTCTAGTGCGGCTTTaGGCGGGAATGTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSESLVRL*AGMSGG
Trigger: TCCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGTCTCTAGTGCGGCTTTaGGCGGGAATGTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHHPRRVLSCSDTETPEWSLVRL*AGMSGG
Trigger: TCCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGA...CCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTCGAGTTGGAGCCGAATaGCCAGCCTTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSRVGAE*PAFLLP
Trigger: CGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCG...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGACTGGGCATGCTGTTaGTGCCTCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDDWACC*CLQGWQ
Trigger: TTGCCAACCCTGGAGGCAGCAACAGCATGCCCAGTC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTTGCGCTGCACAGAGCTaGGGCTCTGACTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGCAAQS*GSDWAC
Trigger: GCATGCCCAGTCAGAGCCGCAGCTCTGTGCAGCGCA...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSVPSPKACSVMLRHRDSSLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...GGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACACTGGCTACCCTGGCTaGCCACCTCCAACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDTGYPG*PPPTSS
Trigger: TGAAGAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGT...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGACTCCAGAAGTGGACATaGGGTAAAGCCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGLQKWT*GKAWPR
Trigger: CCTTGGCCAGGCTTTACCCCATGTCCACTTCTGGAG...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCACATGGTCCCGGCTCTaGCCTCCTGTTACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTTWSRL*PPVTFP
Trigger: GGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGT...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGCGAGGATGCCCACCTaGTCTCGGAACATCATGGTG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHARMPT*SRNIMV
Trigger: CACCATGATGTTCCGAGACCAGGTGGGCATCCTCGC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGTCCGACTCCAGCAGGTaGATGTCATTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGSDSSR*MSLQSA
Trigger: GGCGGACTGCAATGACATCCACCTGCTGGAGTCGGA...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTCCGACTCCAGCAGGTaGATGTCATTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSESDSSR*MSLQSA
Trigger: GGCGGACTGCAATGACATCCACCTGCTGGAGTCGGA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVNRSSR*LSQRAS
Trigger: ACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGATGGTAGGAGGGCTCTaGCCGGGAGCGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQMVGGL*PGAEAT
Trigger: AGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACCAT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTATCCATTTTCCCGGGGTaGCTTGTCCTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVSIFPG*LVLPAW
Trigger: CCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGA...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGGGGCTAGGGTGGATTTaGCAGGGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRGLGWI*QGRPVF
Trigger: AAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCC...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGATTCAGTGGGCTAGGGTaGATTTGGCAGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGFSGLG*IWQGRP
Trigger: AGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGAA...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCATGGAGCGCTTCAGTaGGCTAGGGTGGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSHGALQ*ARVDLA
Trigger: TGCCAAATCCACCCTAGCCCACTGAAGCGCTCCATG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTCAGGGCTATCTTGTaGCGGGCACCTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSELRAIL*RAPLVT
Trigger: CGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAG...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCTCAGGGCTATCTTGTaGCGGGCACCTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQLRAIL*RAPLVT
Trigger: CGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAG...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGTAGTTCTCCACAGCTaGAGGGTCCTTGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQVVLHS*RVLGLG
Trigger: ACCGAGGCCAAGGACCCTCCAGCTGTGGAGAACTAC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGATCACCCGTGTAAACTaGCTGGGGATGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRITRVN*LGMSPS
Trigger: CGACGGAGACATCCCCAGCCAGTTTACACGGGTGAT...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGATGTTCTCCTCGTCTaGTCGGGACACCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWDVLLV*SGHQQL
Trigger: CAACTGCTGGTGTCCCGACCAGACGAGGAGAACATC...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEIGNCR*VRRATP
Trigger: GGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAAT...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAAGCTGCGGCTCTGACTaGGCATGCTGTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVSCGSD*ACCCCL
Trigger: GAGGCAGCAACAGCATGCCCAGTCAGAGCCGCAGCT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTAACATGAGAATGGCCTaGGGTGACGAGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQANMRMA*GDEWTG
Trigger: CCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGAACCGGGCAGTCTaGAGGGAACATGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSRNRAV*REHENG
Trigger: GCCATTCTCATGTTCCCTCCAGACTGCCCGGTTCCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGAGGAACCGGGCAGTCTaGAGGGAACATGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVRNRAV*REHENG
Trigger: GCCATTCTCATGTTCCCTCCAGACTGCCCGGTTCCT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTTTGGGGAGAGGCAGGTaGTCAGCGGTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGLGRGR*SAVWRR
Trigger: CCTCCTCCAGACCGCTGACCACCTGCCTCTCCCCAA...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGGGAGTCTGCTCCCTTaGGGAGAGGCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGGSLLP*GEAGGQ
Trigger: CTGACCACCTGCCTCTCCCCAAGGGAGCAGACTCCC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCTCCCTGCCACTGTCTTaGCTGAGAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTSLPLS*LRETWG
Trigger: TCCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGA...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTCCCTGCCACTGTCTTaGCTGAGAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLSLPLS*LRETWG
Trigger: TCCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCCTCACCAACCAGACCTaGGAGCGGAGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTLTNQT*ERRRVC
Trigger: ACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAG...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGQSVGL*GWDESL
Trigger: CAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTG...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGCAGTCTGTCGGACTCTaGGGCTGGGACGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: SHHPRRVLSCSDTETPEWQSVGL*GWDESL
Trigger: CAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTG...CCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACACTCATTCCAGCCTTTaGACCAGCCAGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHTHSSL*TSQRGC
Trigger: GCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGT...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGACTCATTCCAGCCTTTaGACCAGCCAGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQTHSSL*TSQRGC
Trigger: GCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGCCTGCTGCCACTGGCTaGCGATGGCAGCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEPAATG*RWQHCW
Trigger: CCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGG...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCCTGCTGCCACTGGCTaGCGATGGCAGCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSPAATG*RWQHCW
Trigger: CCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGG...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGCGACTCTCCTCGATaGAAGCATTGCTCTCGATTG +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGDSPR*KHCSRL
Trigger: CAATCGAGAGCAATGCTTTCATCGAGGAGAGTCGCC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHACRDE*HGALQW
Trigger: CCACTGAAGCGCTCCATGTCACTCATCCCTACAAGC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGACRDE*HGALQW
Trigger: CCACTGAAGCGCTCCATGTCACTCATCCCTACAAGC...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLACRDE*HGALQW
Trigger: CCACTGAAGCGCTCCATGTCACTCATCCCTACAAGC...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGAGGCTCTTGAGCCATaGGGGCACATCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQEALEP*GHIFHA
Trigger: GGCATGAAAGATGTGCCCTCATGGCTCAAGAGCCTC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGCAAACGGAGGCTCTTaGGCCATGAGGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLANGGS*AMRAHL
Trigger: AAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGC...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGCCTTCTCTAGGGACTTaGGGACGCTCTGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLPSLGT*GRSVSH
Trigger: GTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGG...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTCCTTCTCTAGGGACTTaGGGACGCTCTGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAPSLGT*GRSVSH
Trigger: GTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGG...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGCTGGAGGTAACTGGTaGTGTTCTCCTCGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEAGGNW*CSPRLV
Trigger: GACCAGACGAGGAGAACATCACCAGTTACCTCCAGC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTACAGAGCTGCGGCTCTaGCTGGGCATGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGTELRL*LGMLLL
Trigger: CAGCAACAGCATGCCCAGTCAGAGCCGCAGCTCTGT...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAACTCCAGAGTGGGATTaGTCTCCAGGTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLSHHPRRVLSCSDTETPTPEWD*SPGQAQ
Trigger: CTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGT...TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGCGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGERRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTGCCACTGTCTTGGCTaGGAGAGACCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLCHCLG*ERPGDS
Trigger: AGAATCCCCAGGTCTCTCTCAGCCAAGACAGTGGCA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTCCTTTCCCTTATTCCTaGCTCCCAAGTCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTPFPYS*LPSLTN
Trigger: GTTGGTGAGACTTGGGAGTCAGGAATAAGGGAAAGG...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTGGCTGCCTGGAGCACTaGGATGAGAAGAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAGCLEH*DEKNPV
Trigger: CACAGGATTCTTCTCATCGCAGTGCTCCAGGCAGCC...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGACCAGCCAGCGAGGATaGCCACCTGGTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQTSQRG*PPGLGT
Trigger: TGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSESLDSC*HWLTMA
Trigger: TGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTTCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQASLDSC*HWLTMA
Trigger: TGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGA...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGACTTGGCCTCTGTGTTaGCTGGCTGAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGTWPLC*LAEAGE
Trigger: TTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTCCGGCTGGAGCCCTaGTCCTCTGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQFRLEP*SSVCSL
Trigger: CAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAA...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAAGGGCTGCATACTTGTaGAAACGGAGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDERAAYL*KRRLLS
Trigger: GCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCT...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCACGCAGCTTCTGGATaGTCAGGGCTATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAHAASG*SGLSCG
Trigger: GCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTCACGCAGCTTCTGGATaGTCAGGGCTATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVHAASG*SGLSCG
Trigger: GCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTG...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGATCTGCTGCAGCTCCTaGAGAGCGTTTCGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVICCSS*RAFRRF
Trigger: GAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGAT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGTGATGATGATCTGCTaGAGCTCCTGCAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASVMMIC*SSCRAF
Trigger: AAACGCTCTGCAGGAGCTGCAGCAGATCATCATCAC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGGTGATGATGATCTGCTaGAGCTCCTGCAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAVMMIC*SSCRAF
Trigger: AAACGCTCTGCAGGAGCTGCAGCAGATCATCATCAC...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCCGGGGCAGGCTCACTaGCATCAGTGGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVPGQAH*HQWELE
Trigger: CTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGCGAGTTGGAGCCGAATaGCCAGCCTTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGRVGAE*PAFLLP
Trigger: CGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCG...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGACTGGGCATGCTGTTaGTGCCTCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVDWACC*CLQGWQ
Trigger: TTGCCAACCCTGGAGGCAGCAACAGCATGCCCAGTC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGTGCGCTGCACAGAGCTaGGGCTCTGACTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGECAAQS*GSDWAC
Trigger: GCATGCCCAGTCAGAGCCGCAGCTCTGTGCAGCGCA...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CAGGAGCTGGAGGGAGGCCCAAGAAAAGGCACTCAGGTAGCCTGTCATCCCAGTAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: QELEGGPRKGTQVACHPSRRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...ACTGGGATGACAGGCTACCTGAGTGCCTTTTCTTGGGCCTCCCTCCAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR GCA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PQLLSITFWRAGSLPCASRRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGAGTCTGGCCAGTCCCTaGCCCCTTTATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQSLASP*PLYPGC
Trigger: GCAGCCAGGATAAAGGGGGCAGGGACTGGCCAGACT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTACTGGCTACCCTGGCTaGCCACCTCCAACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSTGYPG*PPPTSS
Trigger: TGAAGAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGT...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCAGGGAACATGACTGGTaGAGAAGATCTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: GGGSALSPHKVQALPATVREHDW*RRSSDG
Trigger: TCCATCACTAGATCTTCTCCACCAGTCATGTTCCCT...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQGSLLT*GEVLVQ
Trigger: CTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCC...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCGTTTCTGGGCGTGGTaGCAACGGTTGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGRFWAW*QRLLGE
Trigger: CTCCCCCAACAACCGTTGCCACCACGCCCAGAAACG...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGATCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERSCTPT*PLCCLA
Trigger: AGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGA...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQNRSSR*LSQRAS
Trigger: ACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERTELDG*KGTCPF
Trigger: AAATGGACACGTGCCCTTCCACCCATCCAGCTCAGT...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGGGCTAGGGTGGATTTaGCAGGGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQGLGWI*QGRPVF
Trigger: AAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACTTCAGTGGGCTAGGGTaGATTTGGCAGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHFSGLG*IWQGRP
Trigger: AGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGAA...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACCATGGAGCGCTTCAGTaGGCTAGGGTGGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHHGALQ*ARVDLA
Trigger: TGCCAAATCCACCCTAGCCCACTGAAGCGCTCCATG...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACACTCACCAGGGACCTaGGGGCTTGTAGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVHSPGT*GLVGMS
Trigger: ACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCCACTCACCAGGGACCTaGGGGCTTGTAGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: LSVPSPKACSVMLRHRDSHSPGT*GLVGMS
Trigger: ACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTG...GGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGGCCCCAAGCTCCTCTaGACTCGGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVGPKLL*TRPLTR
Trigger: CCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGGGGCC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGGAAGGTGTTCCGGCTaGAGCCCTGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGGRCSG*SPAPLS
Trigger: AGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACTCAGGGCTATCTTGTaGCGGGCACCTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVLRAIL*RAPLVT
Trigger: CGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRLSRSF*MLRAIL
Trigger: CAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTGTGCCGGGGTaGGCTAGGGGAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSLSVPG*ARGGSA
Trigger: TGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAA...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGCAGCTGGAGGGTCCTTaGCCTCGGTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGQLEGP*PRCLCL
Trigger: CAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTAGTTCTCCACAGCTaGAGGGTCCTTGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVVVLHS*RVLGLG
Trigger: ACCGAGGCCAAGGACCCTCCAGCTGTGGAGAACTAC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGTAGTTCTCCACAGCTaGAGGGTCCTTGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSVVLHS*RVLGLG
Trigger: ACCGAGGCCAAGGACCCTCCAGCTGTGGAGAACTAC...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGGGAGCTGGAGCTGGTaGAGGTGGGTAGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGGSWSW*RWVVLH
Trigger: GTGGAGAACTACCCACCTCCACCAGCTCCAGCTCCC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTATCACCCGTGTAAACTaGCTGGGGATGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVITRVN*LGMSPS
Trigger: CGACGGAGACATCCCCAGCCAGTTTACACGGGTGAT...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGATGTTCTCCTCGTCTaGTCGGGACACCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHDVLLV*SGHQQL
Trigger: CAACTGCTGGTGTCCCGACCAGACGAGGAGAACATC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAGGAACCGGGCAGTCTaGAGGGAACATGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQRNRAV*REHENG
Trigger: GCCATTCTCATGTTCCCTCCAGACTGCCCGGTTCCT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGAGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGVGPVR*WRFCLS
Trigger: GGACAGACAAAACCTCCACCATCTGACGGGACCCAC...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGTGGTCAGTTTGTCTCTaGGGAGTCTGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEWSVCL*GVCSLG
Trigger: CCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCA...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTGGTCAGTTTGTCTCTaGGGAGTCTGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQWSVCL*GVCSLG
Trigger: CCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAVGLWG*DESLGY
Trigger: ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGAC...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACGTCGGACTCTGGGGCTaGGACGAATCTCTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDVGLWG*DESLGY
Trigger: ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGAC...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGACCCGTTTCAGAAGTaGCAGGAGGGCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGDPFQK*QEGHCL
Trigger: CAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTC...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQCSQYC*WLAALS
Trigger: GCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCA...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACCTTTGGTGACGTTCTaGGACTCCAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVPLVTF*DSRCCS
Trigger: TGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGACAGAGCTGCGGCTCTaGCTGGGCATGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGETELRL*LGMLLL
Trigger: CAGCAACAGCATGCCCAGTCAGAGCCGCAGCTCTGT...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCATTAGAATATATAGCTaGGCCAGCCCACCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSIRIYS*ASPPSR
Trigger: GCGAGAGGGTGGGCTGGCTCAGCTATATATTCTAAT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCGACGGGCCTGGGAGTaGGCAAGGCATGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVRRAWE*ARHVPM
Trigger: CATTGGCACATGCCTTGCTCACTCCCAGGCCCGTCG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTTTCAAGCCACCCCACTaGTCAGGGAACATGACTGGT +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAFKPPH*SGNMTG
Trigger: ACCAGTCATGTTCCCTGAGCAGTGGGGTGGCTTGAA...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLFSLDS*CHWLTM
Trigger: CATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGAGGGCTGCATACTTGTaGAAACGGAGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLRAAYL*KRRLLS
Trigger: GCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCT...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATATCTGCTGCAGCTCCTaGAGAGCGTTTCGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYICCSS*RAFRRF
Trigger: GAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGAT...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACATCTGCTGCAGCTCCTaGAGAGCGTTTCGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDICCSS*RAFRRF
Trigger: GAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGAT...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGTGATGATGATCTGCTaGAGCTCCTGCAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWVMMIC*SSCRAF
Trigger: AAACGCTCTGCAGGAGCTGCAGCAGATCATCATCAC...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGGAGTGATGATGATCTaGTGCAGCTCCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVGVMMI*CSSCRA
Trigger: CGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATAGCAGCCGTTTCTTCTaGGTCTCCGTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYSSRFF*VSVKAS
Trigger: TGAGGCTTTCACGGAGACGCAGAAGAAACGGCTGCT...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTTCTCTAGTGCGGCTTTaGGCGGGAATGTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGSLVRL*AGMSGG
Trigger: TCCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGA...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGTCTTGGCTCCAGAAGTaGACATGGGGTAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLSWLQK*TWGKAW
Trigger: CCAGGCTTTACCCCATGTCCACTTCTGGAGCCAAGA...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTCTCAGGGAACATGACTaGTGGAGAAGATCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGLREHD*WRRSSD
Trigger: ATCACTAGATCTTCTCCACCAGTCATGTTCCCTGAG...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTTTGGTAGTGGCTGCCTaGAGCACTGCGATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQALVVAA*STAMRR
Trigger: TCTTCTCATCGCAGTGCTCCAGGCAGCCACTACCAA...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGCGTTTCTGGGCGTGGTaGCAACGGTTGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGERFWAW*QRLLGE
Trigger: CTCCCCCAACAACCGTTGCCACCACGCCCAGAAACG...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGGACGTTTCTGGGCGTaGTGGCAACGGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEGRFWA*WQRLLG
Trigger: CCCCAACAACCGTTGCCACCACGCCCAGAAACGTCC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGCGAGGATGCCCACCTaGTCTCGGAACATCATGGTG +
Preference number: 4 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGARMPT*SRNIMV
Trigger: CACCATGATGTTCCGAGACCAGGTGGGCATCCTCGC...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTGCAGGAAGCGGGCCTaGGTACGGGTGACCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVCRKRA*VRVTRF
Trigger: GAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGCGATGGCAGCACTGTTaGCCTCCGACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGERWQHC*PPTPAG
Trigger: ACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCG...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYTELDG*KGTCPF
Trigger: AAATGGACACGTGCCCTTCCACCCATCCAGCTCAGT...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVTELDG*KGTCPF
Trigger: AAATGGACACGTGCCCTTCCACCCATCCAGCTCAGT...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGGGCTAGGGTGGATTTaGCAGGGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVGLGWI*QGRPVF
Trigger: AAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGGGCTAGGGTGGATTTaGCAGGGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CLSHHPRRVLSCSDTETPGLGWI*QGRPVF
Trigger: AAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCC...TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTTTCAGTGGGCTAGGGTaGATTTGGCAGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSFSGLG*IWQGRP
Trigger: AGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGAA...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQALSRSF*MLRAIL
Trigger: CAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGCGGGACACCAGCAGTTaGGTGCACACTTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQRDTSS*VHTLPI
Trigger: GATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCG...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGATGTTCTCCTCGTCTaGTCGGGACACCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CLSHHPRRVLSCSDTETPDVLLV*SGHQQL
Trigger: CAACTGCTGGTGTCCCGACCAGACGAGGAGAACATC...TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCTATGGGGAGCGAGTTaGAGCCGAATGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGLWGAS*SRMPSL
Trigger: AAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAG...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTAGCTGCGGCTCTGACTaGGCATGCTGTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSSCGSD*ACCCCL
Trigger: GAGGCAGCAACAGCATGCCCAGTCAGAGCCGCAGCT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAACTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDELSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSLSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGTGTCCTTGCAGAATGTaGGGAATGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRCPCRM*GMVKGK
Trigger: CTTCCCCTTCACCATTCCCCACATTCTGCAAGGACA...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGCCTATGTCTTCTGGATaGGAGAAGGATGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAPMSSG*EKDALC
Trigger: ACACAAAGCATCCTTCTCTCATCCAGAAGACATAGG...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGACCCGTTTCAGAAGTaGCAGGAGGGCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSDPFQK*QEGHCL
Trigger: CAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTC...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGTGTTGCCTGGCTaGAGCAGGGGAAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVSVLPG*SRGRWD
Trigger: GTCCCACCTTCCCCTGCTTCAGCCAGGCAACACAGA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGAGCATTGCTCTCGATTaGGTAGGCCAGCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGSIALD*VGQHFL
Trigger: CAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCT...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAGCATTGCTCTCGATTaGGTAGGCCAGCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQSIALD*VGQHFL
Trigger: CAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGGCGAGAGAGGTGCGTaGTCGGGCGTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVGERGA*SGVVKA
Trigger: TGCTTTTACCACGCCCGATCACGCACCTCTCTCGCC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGAGGCTCTTGAGCCATaGGGGCACATCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGEALEP*GHIFHA
Trigger: GGCATGAAAGATGTGCCCTCATGGCTCAAGAGCCTC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTCTCGTAGCTCATCTGTaGGAAGAGGGCTGCATACTT +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVLVAHL*EEGCIL
Trigger: AAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAG...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGCTCGTAGCTCATCTGTaGGAAGAGGGCTGCATACTT +
Preference number: 4 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLLVAHL*EEGCIL
Trigger: AAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAG...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGCTGGAGGTAACTGGTaGTGTTCTCCTCGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGAGGNW*CSPRLV
Trigger: GACCAGACGAGGAGAACATCACCAGTTACCTCCAGC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTCCGTGAAAGCCTCATaGGTCAGGCACTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: LSPHKVQALPATVLAERDSVKAS*VRHFSM
Trigger: CATCGAAAAGTGCCTGACTCATGAGGCTTTCACGGA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTCCGTGAAAGCCTCATaGGTCAGGCACTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQSVKAS*VRHFSM
Trigger: CATCGAAAAGTGCCTGACTCATGAGGCTTTCACGGA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTTCCGTGAAAGCCTCATaGGTCAGGCACTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQASVKAS*VRHFSM
Trigger: CATCGAAAAGTGCCTGACTCATGAGGCTTTCACGGA...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTTCCGTGAAAGCCTCATaGGTCAGGCACTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVSVKAS*VRHFSM
Trigger: CATCGAAAAGTGCCTGACTCATGAGGCTTTCACGGA...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGAGTGTTCCACTTAAGTaGGGTCATGACATAATGGGG +
Preference number: 4 (lower is better)
Translates to: SPQLLSITFWRAGSLPCASVPLK*GHDIMG
Trigger: CCCCATTATGTCATGACCTCACTTAAGTGGAACACT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAAGTGTTCCACTTAAGTaGGGTCATGACATAATGGGG +
Preference number: 4 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTSVPLK*GHDIMG
Trigger: CCCCATTATGTCATGACCTCACTTAAGTGGAACACT...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCATTCTGCCTCATCTaGCCAGTAGGAAGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAPFCLI*PVGRSL
Trigger: TAGACTCCTTCCTACTGGGCAGATGAGGCAGAATGG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTACTTGGCCTCTGTGTTaGCTGGCTGAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGTWPLC*LAEAGE
Trigger: TTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCTGGGGCGAGAGAGGTaGGTGATCGGGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVLGRER*VIGRGK
Trigger: TTTACCACGCCCGATCACGCACCTCTCTCGCCCCAG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTAGGGCACATCTTTCATaGCACTGCCATCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSRAHLS*HCHPPG
Trigger: TCCAGGAGGATGGCAGTGGCATGAAAGATGTGCCCT...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGCACGCAGCTTCTGGATaGTCAGGGCTATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQHAASG*SGLSCG
Trigger: GCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTG...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGRSFST*CFQDSS
Trigger: GCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCT...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGCAGGTTCTCTGCCCTaGGCGTCACCCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSAGSLP*ASPQMS
Trigger: TGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCAGGAACTGTCTTTCTTaGCTCCAGAAGTGGACATGG +
Preference number: 4 (lower is better)
Translates to: VKSLRMSQLGRWVEGEEGRNCLS*LQKWTW
Trigger: CCATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCT...GCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTGAATCCTGTGGTCCTTaGAACAGAAGAGCACAAACT +
Preference number: 4 (lower is better)
Translates to: LEENGLELEGLEEGALPSESCGP*NRRAQT
Trigger: AGTTTGTGCTCTTCTGTTCCAAGGACCACAGGATTC...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVLSRSF*MLRAIL
Trigger: CAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGTAGTTCTCCACAGCTaGAGGGTCCTTGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEVVLHS*RVLGLG
Trigger: ACCGAGGCCAAGGACCCTCCAGCTGTGGAGAACTAC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCGGGACACCAGCAGTTaGGTGCACACTTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSRDTSS*VHTLPI
Trigger: GATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCG...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTAACATGAGAATGGCCTaGGGTGACGAGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSNMRMA*GDEWTG
Trigger: CCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGGAGGAGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGGGFVCPICGKKGRKGGVGPVR*WRFCLS
Trigger: GGACAGACAAAACCTCCACCATCTGACGGGACCCAC...TCCTCCCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGTGGGTCCCGTCAGATaGTGGAGGTTTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGVGPVR*WRFCLS
Trigger: GGACAGACAAAACCTCCACCATCTGACGGGACCCAC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCTCTCAATAACATTCTaGAGGGCAGGTTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQALSITF*RAGSLP
Trigger: GGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTGTCCTTGCAGAATGTaGGGAATGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQCPCRM*GMVKGK
Trigger: CTTCCCCTTCACCATTCCCCACATTCTGCAAGGACA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGTGTCCTTGCAGAATGTaGGGAATGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGCPCRM*GMVKGK
Trigger: CTTCCCCTTCACCATTCCCCACATTCTGCAAGGACA...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTGTGCTTGGCTGAAGTaGCAGAGGGAGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVCAWLK*QRETWV
Trigger: CACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR TCA 90 bp TTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGCATTGCTCTCGATTaGGTAGGCCAGCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSVPSPKACSVMLRHRDSSIALD*VGQHFL
Trigger: CAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCT...GGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR TCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGGGCGACTCTCCTCGATaGAAGCATTGCTCTCGATTG +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQGDSPR*KHCSRL
Trigger: CAATCGAGAGCAATGCTTTCATCGAGGAGAGTCGCC...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGCCTTCTCTAGGGACTTaGGGACGCTCTGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEPSLGT*GRSVSH
Trigger: GTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGG...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTCTTCTGCGTCTCCGTaGAAGCCTCATGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSSSASP*KPHESG
Trigger: GCCTGACTCATGAGGCTTTCACGGAGACGCAGAAGA...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGTCTTCTGCGTCTCCGTaGAAGCCTCATGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGESSASP*KPHESG
Trigger: GCCTGACTCATGAGGCTTTCACGGAGACGCAGAAGA...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTACCTTTCCCTTATTCCTaGCTCCCAAGTCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVPFPYS*LPSLTN
Trigger: GTTGGTGAGACTTGGGAGTCAGGAATAAGGGAAAGG...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCGAATCTCTGGGTTATaGTATAGTGTTCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: AYGCAGLWVPSDGGGFVCRISGL*YSVPLK
Trigger: CTTAAGTGGAACACTATATCATAACCCAGAGATTCG...ACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR GCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSRRATV*SHSFQP
Trigger: AGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGERRATV*SHSFQP
Trigger: AGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCT...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGCAGGTGGATGTCATTaGAGTCCGCCAGTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEAGGCH*SPPVSA
Trigger: AGCACTCACTGGCGGACTGCAATGACATCCACCTGC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGGGGAGACCTGTGTTTaGATTGCTCCCAATACTGTT +
Preference number: 4 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEGETCV*IAPNTV
Trigger: AACAGTATTGGGAGCAATGCAAACACAGGTCTCCCC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGGGGAGACCTGTGTTTaGATTGCTCCCAATACTGTT +
Preference number: 4 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQGETCV*IAPNTV
Trigger: AACAGTATTGGGAGCAATGCAAACACAGGTCTCCCC...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTAGGGCACATCTTTCATaGCACTGCCATCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGRAHLS*HCHPPG
Trigger: TCCAGGAGGATGGCAGTGGCATGAAAGATGTGCCCT...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSRSFST*CFQDSS
Trigger: GCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCT...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCACTGGCTACCCTGGCTaGCCACCTCCAACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVTGYPG*PPPTSS
Trigger: TGAAGAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAACCCTGGGTTCCCCTTaGAGAAGGAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVTLGSP*RRNCLS
Trigger: AGAAAGACAGTTCCTTCTCCAAGGGGAACCCAGGGT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGCGAGGATGCCCACCTaGTCTCGGAACATCATGGTG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVARMPT*SRNIMV
Trigger: CACCATGATGTTCCGAGACCAGGTGGGCATCCTCGC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTGGAGCTGGTGGAGGTaGGTAGTTCTCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVWSWWR*VVLHSW
Trigger: CCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTATCACCCGTGTAAACTaGCTGGGGATGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSITRVN*LGMSPS
Trigger: CGACGGAGACATCCCCAGCCAGTTTACACGGGTGAT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCGGGACACCAGCAGTTaGGTGCACACTTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVRDTSS*VHTLPI
Trigger: GATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGATGTTCTCCTCGTCTaGTCGGGACACCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEDVLLV*SGHQQL
Trigger: CAACTGCTGGTGTCCCGACCAGACGAGGAGAACATC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCTATGGGGAGCGAGTTaGAGCCGAATGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVLWGAS*SRMPSL
Trigger: AAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGTGGTCAGTTTGTCTCTaGGGAGTCTGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEWSVCL*GVCSLG
Trigger: CCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCA...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGGCGACTCTCCTCGATaGAAGCATTGCTCTCGATTG +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEGDSPR*KHCSRL
Trigger: CAATCGAGAGCAATGCTTTCATCGAGGAGAGTCGCC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGCAAACGGAGGCTCTTaGGCCATGAGGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVANGGS*AMRAHL
Trigger: AAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGCTCGTAGCTCATCTGTaGGAAGAGGGCTGCATACTT +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQLVAHL*EEGCIL
Trigger: AAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAG...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCCCTTCTCTAGGGACTTaGGGACGCTCTGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVPSLGT*GRSVSH
Trigger: GTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGG...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTATTAGAATATATAGCTaGGCCAGCCCACCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGIRIYS*ASPPSR
Trigger: GCGAGAGGGTGGGCTGGCTCAGCTATATATTCTAAT...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTACTTTCTATCCCATGTaGTTGGCTGAAGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: AGSLPCASPQMSNVSEQATFYPM*LAEVTE
Trigger: CTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGATGGATGAGAGAAGGATaGTTTGTGTTCGGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: ALSPHKVQALPATVLAERWMREG*FVFGLD
Trigger: ATCTAGACCGAACACAAAGCATCCTTCTCTCATCCA...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCACTTGGCCTCTGTGTTaGCTGGCTGAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVTWPLC*LAEAGE
Trigger: TTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGGGGAGACCTGTGTTTaGATTGCTCCCAATACTGTT +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVGETCV*IAPNTV
Trigger: AACAGTATTGGGAGCAATGCAAACACAGGTCTCCCC...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGAGGGCTGCATACTTGTaGAAACGGAGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGERAAYL*KRRLLS
Trigger: GCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCT...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGATCTGCTGCAGCTCCTaGAGAGCGTTTCGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEICCSS*RAFRRF
Trigger: GAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGAT...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGGAGTGATGATGATCTaGTGCAGCTCCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVGVMMI*CSSCRA
Trigger: CGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQRRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCGGTTCCTATGTCTTCTaGATGAGAGAAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSGSYVF*MREGCF
Trigger: AAAGCATCCTTCTCTCATCCAGAAGACATAGGAACC...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCCCTTGGGCCTCTCTaGTTTATACCTTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQSLGPL*FIPSSH
Trigger: GTGGCTTGAAGGTATAAACCAGAGAGGCCCAAGGGA...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGTCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGESCTPT*PLCCLA
Trigger: AGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGA...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSLSRSF*MLRAIL
Trigger: CAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAG...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCATCACCCGTGTAAACTaGCTGGGGATGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVITRVN*LGMSPS
Trigger: CGACGGAGACATCCCCAGCCAGTTTACACGGGTGAT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp TCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCTGGGGAGGGTCCCGTCAGATGGTaGAGGTTTTGTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SNVSEQAPQGSGQFVSGEGPVRW*RFCLSH
Trigger: ATGGGACAGACAAAACCTCCACCATCTGACGGGACC...CTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTATTAGAATATATAGCTaGGCCAGCCCACCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSIRIYS*ASPPSR
Trigger: GCGAGAGGGTGGGCTGGCTCAGCTATATATTCTAAT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTCCTTTCCCTTATTCCTaGCTCCCAAGTCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSPFPYS*LPSLTN
Trigger: GTTGGTGAGACTTGGGAGTCAGGAATAAGGGAAAGG...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAAGTGTTCCACTTAAGTaGGGTCATGACATAATGGGG +
Preference number: 4 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVSVPLK*GHDIMG
Trigger: CCCCATTATGTCATGACCTCACTTAAGTGGAACACT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp GTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCCGAATCTCTGGGTTATaGTATAGTGTTCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: VKSLRMSQLGRWVEGEEGRISGL*YSVPLK
Trigger: CTTAAGTGGAACACTATATCATAACCCAGAGATTCG...GCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATG +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVFSLDS*CHWLTM
Trigger: CATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCAGGGCACATCTTTCATaGCACTGCCATCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVRAHLS*HCHPPG
Trigger: TCCAGGAGGATGGCAGTGGCATGAAAGATGTGCCCT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCAGCAGCCGTTTCTTCTaGGTCTCCGTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVSSRFF*VSVKAS
Trigger: TGAGGCTTTCACGGAGACGCAGAAGAAACGGCTGCT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR GCA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTAGGCGTGTTCTGTCATaGTCAGACACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSRRVLS*SDTETP
Trigger: TGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCT...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CCA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVTELDG*KGTCPF
Trigger: AAATGGACACGTGCCCTTCCACCCATCCAGCTCAGT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR TCA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCGTAGGAAGGAGTCTATaGTATCATCATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTVGRSL*YHHQEM
Trigger: CATCTCTTGATGATGATATCATAGACTCCTTCCTAC...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CAA 90 bp CCGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: PPAAQGAYGCAGLWVPSDSRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...ATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS CCA 90 bp GAACATCATGGTGCCGGGCCTGGGGCCAGGGTCGGGGGACGGCGGTaGCGAGGGCCAGCGCCGTCACATGGTCCCGGCTCTGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: EHHGAGPGARVGGRR*RGPAPSHGPGSGLL
Trigger: CAGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGCCCTCGCCACCGCCGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGATGTTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp CAGCGAGGATGCCCACCTGGTCTCGGAACATCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACGGCGGTGGCGAGGGCCAGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: QRGCPPGLGTSWCRA*GQGRGTAVARASAV
Trigger: GACGGCGCTGGCCCTCGCCACCGCCGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACCAGGTGGGCATCCTCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp GGCCAGGGTCGGGGGACGGCGGTGGCGAGGGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCTGTTACCTTTCCCCTGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GQGRGTAVARASAVT*SRLWPPVTFPLRAR
Trigger: CCTGGCCCTCAGGGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGCCCTCGCCACCGCCGTCCCCCGACCCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp GCTCAGGAGGCCCATCCGGCCGGGTGGGAGGGCCCGGGGAGGCATTaGGAACTGCCGCTGGGTACGCCGGGCCACTCCCATCCCCACAGA +
Preference number: 5 (lower is better)
Translates to: AQEAHPAGWEGPGRH*ELPLGTPGHSHPHR
Trigger: TCTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCGGCCGGATGGGCCTCCTGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp ATCCGGCCGGGTGGGAGGGCCCGGGGAGGCATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCCATCCCCACAGAGCCAGCTATGGGG +
Preference number: 5 (lower is better)
Translates to: IRPGGRARGGIGNCR*VRRATPIPTEPAMG
Trigger: CCCCATAGCTGGCTCTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCGGCCGGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPALPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAACAGCTGGAGGGTCCTaGGCCTCGGTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: PSRCRGEARWGLAPARRPTAGGS*ASVPLS
Trigger: AGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTGT...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAATCTCTAGTGCGGCTTaGCGCGGGAATGTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: PSRCRGEARWGLAPARRPISSAA*RGNVRR
Trigger: CCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGAT...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCATCGGGACACCAGCAGTaGGGTGCACACTTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: PSRCRGEARWGLAPARRPSGHQQ*GAHFAH
Trigger: ATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CGCCCGCCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGCTATGGGGAGCGAGTaGGAGCCGAATGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: RPPPREPMGALGCGSRQMAMGSE*EPNAQP
Trigger: AGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAGC...CATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCACACTCATTCCAGCCTTaGAACCAGCCAGCGAGGATG +
Preference number: 5 (lower is better)
Translates to: PSRCRGEARWGLAPARRPHSFQP*NQPARM
Trigger: CATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTG...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCCCACCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCTGCAAACGGAGGCTCTaGAGCCATGAGGGCACATCT +
Preference number: 5 (lower is better)
Translates to: AHPLAVAEKPVGGWPPPACKRRL*SHEGTS
Trigger: AGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCA...GGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGTTGGCCTCGGTGCCTTaGTCTGTGCCGGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PPREPMGALGCGSRQMVELASVP*SVPGWA
Trigger: AGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAA...CTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: GGGSALSPHKVQALPATVSRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCTCGCTGTCGCGGAGAAGCCCGTTGGGGGTTGGCCCCCGCCCGCCGCCCAAGGTGGCTCCTGTCCTaGCAGAATGTGGGGAATGGT +
Preference number: 5 (lower is better)
Translates to: PSRCRGEARWGLAPARRPRWLLS*QNVGNG
Trigger: ACCATTCCCCACATTCTGCAAGGACAGGAGCCACCT...TGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAGCGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp GGCTCTGGCCGGGAGCGGAAGCCACTAGCCAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGTGCGTTGCGGTCCTCCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: GSGRERKPLANRSSR*LSQRASALRSSSVV
Trigger: CACCACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTTGGCTAGTGGCTTCCGCTCCCGGCCAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS TCA 90 bp GCCAGGCAGAGTCCCAAGGGTGGGGCACCTCACCTGGAGGGAACATaGGAATGGCCTGGGGTGACGAGTGGACCGGGAGCGAGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: ARQSPKGGAPHLEGT*EWPGVTSGPGASGC
Trigger: GCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTTCCCTCCAGGTGAGGTGCCCCACCCTTGGGACTCTGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS CCA 90 bp TGTCTCCGTCGGCGACGGGAGCCGGGGCAGGCTCACTGCCATCAGTaGGAGCTGGAGCTGGTGGAGGTGGGTAGTTCTCCACAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLRRRREPGQAHCHQ*ELELVEVGSSPQLE
Trigger: CTCCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGGCTCCCGTCGCCGACGGAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp CCTGGAAGGTGTTCCGGCTGGAGCCCTGCTCCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGCTCTGGGGCGAGAGAGGTGCGTGAT +
Preference number: 5 (lower is better)
Translates to: PGRCSGWSPAPLSAH*QRRPRCSGAREVRD
Trigger: ATCACGCACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp CCATCCTCCTGGAAGGTGTTCCGGCTGGAGCCCTGCTCCTCTGTCTaGTCACTGCCAGAGGAGGCCACGCTGCTCTGGGGCGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: PSSWKVFRLEPCSSV*SLPEEATLLWGERG
Trigger: ACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp GGCGTGGTGGCAACGGTTGTTGGGGGAGGAGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAGCCACGCCTCTCCAGTTTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GVVATVVGGGGSLLT*GEVLVQPRLSSFRL
Trigger: GAGGCGGAAACTGGAGAGGCGTGGCTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598913.5
CDS TCA 90 bp GCGCCGTCACATGGTCCCGGCTCTGGCCTCCTGTTACCTTTCCCCTaGGGGCCAGGGCTTAAGGACGTTTCTGGGCGTGGTGGCAACGGT +
Preference number: 5 (lower is better)
Translates to: APSHGPGSGLLLPFP*GPGLKDVSGRGGNG
Trigger: ACCGTTGCCACCACGCCCAGAAACGTCCTTAAGCCCTGGCCCTCAGGGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGTGACGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTAGCAGGTGGATGTCATaGCAGTCCGCCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPSRWMS*QSASEC
Trigger: GCACTCACTGGCGGACTGCAATGACATCCACCTGCT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTATGCTCAGGGCTATCTaGTGGCGGGCACCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPMLRAI*WRAPLV
Trigger: CACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCAT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCCTCGGTGCCTTaGTCTGTGCCGGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GGGSALSPHKVQALPATVLASVP*SVPGWA
Trigger: AGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAA...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQDSRVG*ISRSGP
Trigger: TGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTC...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTTCGCGGAGAAGCCCGTaGGGGGTTGGCCCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: TSNLFIRVARAGGKWVRASRRSP*GVGPRP
Trigger: CGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGA...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp TTCATGCCACTGCCATCCTCCTGGAAGGTGTTCCGGCTGGAGCCCTaGTCCTCTGTCTGCTCACTGCCAGAGGAGGCCACGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FMPLPSSWKVFRLEP*SSVCSLPEEATLLW
Trigger: CCAGAGCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGGCATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp GGCGTGGTGGCAACGGTTGTTGGGGGAGGAGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAGCCACGCCTCTCCAGTTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: GVVATVVGGGGSLLT*GEVLVQPRLSSFLT
Trigger: TGTGAGGAAACTGGAGAGGCGTGGCTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCACGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000599712.1
ENST00000602243.5
CDS CCA 90 bp GCTCAGCCAGAGGGCCAGTGCGTTGCGGTCCTCCAGTGTGGTGGCTaGGTGGATGAGGGCATAGGAAAGCAGCTGGCGACTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: AQPEGQCVAVLQCGG*VDEGIGKQLATLLD
Trigger: ATCGAGGAGAGTCGCCAGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGGGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: PITQGVFCHAQTQRLQSGGPGEA*GTAAGY
Trigger: GTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCC...CCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTGGGAGTGAGCAAAGGTGGCTCCTGTCCTaGCAGAATGTGGGGAATGGT +
Preference number: 5 (lower is better)
Translates to: PQLPGPQQRSLDGPGSEQRWLLS*QNVGNG
Trigger: ACCATTCCCCACATTCTGCAAGGACAGGAGCCACCT...TTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTAGGGGGAGGAGGGCGTaGAAGAGGGAGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: EPMGALGCGSRQMVEVLSRGRRA*KRETLA
Trigger: AGCCAGGGTCTCCCTCTTCAACGCCCTCCTCCCCCT...AGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp CCGCCCAGGGAGCCTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGCAGGATGACTCTGAGTaGCTCAGTTCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PPREPMGALGCGSRQMVEQDDSE*LSSEAE
Trigger: CTCTGCCTCTGAACTGAGCAACTCAGAGTCATCCTG...CTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS TCA 90 bp TGGACTCGGCCACTCACCAGGGACCTGGGGGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGGGCTAGGGTGGATTTGGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: WTRPLTRDLGACRDE*HGALQWARVDLAGE
Trigger: CTCCCCTGCCAAATCCACCCTAGCCCACTGAAGCGCTCCATGTCACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTGGCCGAGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp GGAAGGTGGGACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATGGCAGCACTGTTGGCCTCCGACTCC +
Preference number: 5 (lower is better)
Translates to: GRWDSRRDTTFSLDS*CHWLTMAALLASDS
Trigger: GGAGTCGGAGGCCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGGGCTCTGCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCACAGCTGGAGGGTCCTaGGCCTCGGTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: GGGSALSPHKVQALPATVTAGGS*ASVPLS
Trigger: AGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTGT...GACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHGPGEA*GTAAGY
Trigger: GTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCC...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGLPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTAGGGGGAGGAGGGCGTaGAAGAGGGAGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LEENGLELEGLEEGALPSRGRRA*KRETLA
Trigger: AGCCAGGGTCTCCCTCTTCAACGCCCTCCTCCCCCT...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGGCGTGGTGGCAACGGTaGTTGGGGGAGGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVAWWQR*LGEEEA
Trigger: GGCTTCCTCCTCCCCCAACAACCGTTGCCACCACGC...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCCAGAGGGCCAGTGCGTaGCGGTCCTCCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSQRASA*RSSSVV
Trigger: CACCACACTGGAGGACCGCAACGCACTGGCCCTCTG...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTTGGCCTCGGTGCCTTaGTCTGTGCCGGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSLASVP*SVPGWA
Trigger: AGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAA...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGCTATGGGGAGCGAGTaGGAGCCGAATGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTAMGSE*EPNAQP
Trigger: AGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAGC...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp TTGCTCCCAATACTGTTGATGGCTGGCGGCACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTTTCCCGGGGTGGCTTGTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LLPILLMAGGTELDG*KGTCPFSRGGLSCQ
Trigger: CTGGCAGGACAAGCCACCCCGGGAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGTGGTGGCAACGGTTGTaGGGGGAGGAGGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HNPSLGIGTRQSVGLWGWWWQRL*GEEEAC
Trigger: GCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCA...CCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGGCGTGGTGGCAACGGTaGTTGGGGGAGGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEAWWQR*LGEEEA
Trigger: GGCTTCCTCCTCCCCCAACAACCGTTGCCACCACGC...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTATGGGTGCGCTGGGCTGTGGGTCCCGTCAGATGGTGGAGGTTTTGTCTGTCCGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: LWVRWAVGPVRWWRFCLSDTTFS*DSCCHW
Trigger: CCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTC...GGACAGACAAAACCTCCACCATCTGACGGGACCCACAGCCCAGCGCACCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAGGGCCAGTGCGTaGCGGTCCTCCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEQRASA*RSSSVV
Trigger: CACCACACTGGAGGACCGCAACGCACTGGCCCTCTG...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACCAGAGGGCCAGTGCGTaGCGGTCCTCCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSPHKVQALPATVLAERDQRASA*RSSSVV
Trigger: CACCACACTGGAGGACCGCAACGCACTGGCCCTCTG...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGTTGGCCTCGGTGCCTTaGTCTGTGCCGGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGLASVP*SVPGWA
Trigger: AGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAA...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGATCTCTAGTGCGGCTTaGCGCGGGAATGTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAISSAA*RGNVRR
Trigger: CCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGAT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGGPGEA*GTAAGY
Trigger: GTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCC...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp TGGGTACGGGTGACCCGTTTCAGAAGTGACAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCTTTGAACCAGCCAGCGAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: WVRVTRFRSDRRATV*SHSFQPLNQPARMP
Trigger: GGGCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTCACCCGTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp AAAGAAAGGTCAGCTGAGGATGTTGGCCAGGCAGAGTCCCAAGGGTaGGGCACCTCACCTGGAGGGAACATGAGAATGGCCTGGGGTGAC +
Preference number: 5 (lower is better)
Translates to: KERSAEDVGQAESQG*GTSPGGNMRMAWGD
Trigger: GTCACCCCAGGCCATTCTCATGTTCCCTCCAGGTGAGGTGCCCCACCCTTGGGACTCTGCCTGGCCAACATCCTCAGCTGACCTTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS-3UTR CAA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTGGTGGCAACGGTTGTaGGGGGAGGAGGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYWWQRL*GEEEAC
Trigger: GCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGCTCATGTACTCCGACTaGGCCTCTGTGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCALMYSD*ASVLPG
Trigger: GCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAG...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTCTCATGTACTCCGACTaGGCCTCTGTGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LEENGLELEGLEEGALPSLMYSD*ASVLPG
Trigger: GCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAG...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TATCCTGGCTGCCCCCAACTCCCCGGGCCTCAGCAGAGATCCCTCGACGGGCCTAGACCTGTGTTTGCATaGCTCCCAATACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: YPGCPQLPGPQQRSLDGPRPVFA*LPILLM
Trigger: CATCAACAGTATTGGGAGCAATGCAAACACAGGTCT...AGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGATGCTCAGGGCTATCTaGTGGCGGGCACCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCAMLRAI*WRAPLV
Trigger: CACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCAT...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATCGGGACACCAGCAGTaGGGTGCACACTTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: PQLLSITFWRAGSLPCASSGHQQ*GAHFAH
Trigger: ATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PQLLSITFWRAGSLPCASDSRVG*ISRSGP
Trigger: TGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTC...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCCTCCCTGCCACTGTCTaGGCTGAGAGAGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTLPATV*AERDLG
Trigger: CCCCAGGTCTCTCTCAGCCAAGACAGTGGCAGGGAG...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS TCA 90 bp GCCAGAGGCCGCCTGCTACTTTCTATCCCATGTGCTTGGCTGAAGTaGCAGAGGGAGACCTGGGTGAGGCATCTCACTGTGGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: ARGRLLLSIPCAWLK*QRETWVRHLTVAAS
Trigger: AGATGCTGCCACAGTGAGATGCCTCACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGTAGCAGGCGGCCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS TCA 90 bp ACCTGTGTTTGCATTGCTCCCAATACTGTTGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGGCACGTGTCCATTTTCCCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TCVCIAPNTVDGWRH*AGWVEGHVSIFPGW
Trigger: CCACCCCGGGAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS TCA 90 bp GGATTTGGCAGGGGAGACCTGTGTTTGCATTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGCTGGATGGGTGGAAGGGCACGTGTC +
Preference number: 5 (lower is better)
Translates to: GFGRGDLCLHCSQYC*WLAALSWMGGRARV
Trigger: GACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTATGGTGGCAACGGTTGTaGGGGGAGGAGGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVWWQRL*GEEEAC
Trigger: GCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCA...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGGCGTGGTGGCAACGGTaGTTGGGGGAGGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQAWWQR*LGEEEA
Trigger: GGCTTCCTCCTCCCCCAACAACCGTTGCCACCACGC...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCAGGTGGATGTCATaGCAGTCCGCCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSSRWMS*QSASEC
Trigger: GCACTCACTGGCGGACTGCAATGACATCCACCTGCT...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRDTTFS*DSCCHW
Trigger: CCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTC...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCALLPIL*MAGGTE
Trigger: CTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAA...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCTGGGCTAGGGTGGATTaGGCAGGGGAGACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GGQVLCPARHPKCQMFLSWARVD*AGETCV
Trigger: AACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCA...GCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATGGGCTAGGGTGGATTaGGCAGGGGAGACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEWARVD*AGETCV
Trigger: AACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCA...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGACAGCTGGAGGGTCCTaGGCCTCGGTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQTAGGS*ASVPLS
Trigger: AGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTGT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVGPGEA*GTAAGY
Trigger: GTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTTTTCGGTGTGAAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGAGGGGGAGGAGGGCGTaGAAGAGGGAGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LFGVKSLRMSQLGRWVEGRGRRA*KRETLA
Trigger: AGCCAGGGTCTCCCTCTTCAACGCCCTCCTCCCCCT...CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTTGAGAATGTCCCAGTaGGGAAGGTGGGTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCALRMSQ*GRWVEG
Trigger: CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAA...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp TTGAGTAGGCCAGCACTTTCTGCAGTAGCCTCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCTGAAGCAGGGGAAGGTGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: LSRPALSAVASCTPT*PLCCLAEAGEGGTA
Trigger: TGCTGTCCCACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAGGCTACTGCAGAAAGTGCTGGCCTACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp TCCTTCTCTAGGGACTTGAGGACGCTCTGTCTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTGTGGCGGGCACCTTTGGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: SFSRDLRTLCLSRSF*MLRAILWRAPLVTF
Trigger: GAACGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTTGGTGGCAACGGTTGTaGGGGGAGGAGGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGWWQRL*GEEEAC
Trigger: GCAGGCTTCCTCCTCCCCCAACAACCGTTGCCACCA...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GAAGGTGGCTCCTGTCCTTGCAGAATGTGGGGAATGGTGAAGGGGAAGCAGGGACACTCATTCCAGCCTTaGAACCAGCCAGCGAGGATG +
Preference number: 5 (lower is better)
Translates to: EGGSCPCRMWGMVKGKQGHSFQP*NQPARM
Trigger: CATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTG...TCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGCACTCATTCCAGCCTTaGAACCAGCCAGCGAGGATG +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRHSFQP*NQPARM
Trigger: CATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTG...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTAGCAGGTGGATGTCATaGCAGTCCGCCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: AGSLPCASPQMSNVSEQASRWMS*QSASEC
Trigger: GCACTCACTGGCGGACTGCAATGACATCCACCTGCT...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACCTCATGTACTCCGACTaGGCCTCTGTGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LSPHKVQALPATVLAERDLMYSD*ASVLPG
Trigger: GCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAG...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACCTCATGTACTCCGACTaGGCCTCTGTGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHLMYSD*ASVLPG
Trigger: GCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAG...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGTTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRLLPIL*MAGGTE
Trigger: CTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAA...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTGGGCTAGGGTGGATTaGGCAGGGGAGACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LSPHKVQALPATVLAERDWARVD*AGETCV
Trigger: AACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGTGGGCTAGGGTGGATTaGGCAGGGGAGACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PTQPLIRNRDQTVCRTLGWARVD*AGETCV
Trigger: AACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCA...CCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGTGCAAACGGAGGCTCTaGAGCCATGAGGGCACATCT +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRCKRRL*SHEGTS
Trigger: AGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCA...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TCTCCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCCTTCTCTAGGGACTaGAGGACGCTCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SPQLLSITFWRAGSLPCASFSRD*RTLCLS
Trigger: TGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGA...CGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAGTTGGGTGCACACTTaGCCCATCACCCGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: PQLLSITFWRAGSLPCASSWVHT*PITRVN
Trigger: GTTTACACGGGTGATGGGCAAAGTGTGCACCCAACT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCTCCCTCCACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAAGTTGGGTGCACACTTaGCCCATCACCCGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: PPSTWAPTQPLIRNRDQTSWVHT*PITRVN
Trigger: GTTTACACGGGTGATGGGCAAAGTGTGCACCCAACT...TGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGTCGGGACACCAGCAGTaGGGTGCACACTTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQSGHQQ*GAHFAH
Trigger: ATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGCTATGGGGAGCGAGTaGGAGCCGAATGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGAMGSE*EPNAQP
Trigger: AGGCTGGGCATTCGGCTCCAACTCGCTCCCCATAGC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTGGAGGAAAATGGGTTAGAGCTTGAGGGTCTGGAGGAGGGGGCTCTGCCCTCTAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LEENGLELEGLEEGALPSKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...AGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCAAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PQLLSITFWRAGSLPCASKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGAGGTGGCTCCTGTCCTaGCAGAATGTGGGGAATGGT +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRRWLLS*QNVGNG
Trigger: ACCATTCCCCACATTCTGCAAGGACAGGAGCCACCT...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTGGGCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGTTGAGAATGTCCCAGTaGGGAAGGTGGGTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: TWAPTQPLIRNRDQTVCRLRMSQ*GRWVEG
Trigger: CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAA...CCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp CTTCCATTAAAGGGCCAGAGGCCGCCTGCTACTTTCTATCCCATGTaGTTGGCTGAAGTGACAGAGGGAGACCTGGGTGAGGCATCTCAC +
Preference number: 5 (lower is better)
Translates to: LPLKGQRPPATFYPM*LAEVTEGDLGEASH
Trigger: GTGAGATGCCTCACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGTAGCAGGCGGCCTCTGGCCCTTTAATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS GCA 90 bp TCTAGTGCGGCTTTGCGCGGGAATGTCCGGAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGCCGTTTCTTCTGCGTCTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: SSAALRGNVRRSFST*CFQDSSRFFCVSVK
Trigger: TTTCACGGAGACGCAGAAGAAACGGCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCTCCGGACATTCCCGCGCAAAGCCGCACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGCACCCTGGGTTCCCCTaGGAGAAGGAACTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQHPGFP*EKELSF
Trigger: GAAAGACAGTTCCTTCTCCAAGGGGAACCCAGGGTG...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CAA 90 bp AGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTTCCTGACCGCTAACTCCAATCGATaGGTAGTGGCTGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RRVCVRGEGDVKATDFLTANSNR*VVAAWS
Trigger: GCTCCAGGCAGCCACTACCAATCGATTGGAGTTAGC...GGTCAGGAAGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CAA 90 bp GCCCCAACACAACCCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGCACTCATTCCAGCCTTaGAACCAGCCAGCGAGGATG +
Preference number: 5 (lower is better)
Translates to: APTQPLIRNRDQTVCRTLHSFQP*NQPARM
Trigger: CATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTG...CAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGGGTTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAAGCAGGTGGATGTCATaGCAGTCCGCCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVSRWMS*QSASEC
Trigger: GCACTCACTGGCGGACTGCAATGACATCCACCTGCT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTTGCAAACGGAGGCTCTaGAGCCATGAGGGCACATCT +
Preference number: 5 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVCKRRL*SHEGTS
Trigger: AGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCA...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACTGCAAACGGAGGCTCTaGAGCCATGAGGGCACATCT +
Preference number: 5 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHCKRRL*SHEGTS
Trigger: AGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCA...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAAAGAGGGCTGCATACTaGTGCAAACGGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ALSPHKVQALPATVLAERKRAAY*CKRRLL
Trigger: CAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTT...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAATGCTCAGGGCTATCTaGTGGCGGGCACCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVMLRAI*WRAPLV
Trigger: CACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCAT...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSDSRVG*ISRSGP
Trigger: TGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTC...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGCAGATGGTGGAGGTTTaGTCTGTCCCATCACCCAAG +
Preference number: 5 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVQMVEV*SVPSPK
Trigger: CTTGGGTGATGGGACAGACAAAACCTCCACCATCTG...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTCATTAGGAATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAAAAGGTAGTGGTCAGTTaGTCTCTGGGGAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PSLGIGTRQSVGLWGWDEKVVVS*SLGSLL
Trigger: GAGCAGACTCCCCAGAGACAAACTGACCACTACCTT...TTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTCCTAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAGGTGGCTCCTGTCCTaGCAGAATGTGGGGAATGGT +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQRWLLS*QNVGNG
Trigger: ACCATTCCCCACATTCTGCAAGGACAGGAGCCACCT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTTTGAGAATGTCCCAGTaGGGAAGGTGGGTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: AGSLPCASPQMSNVSEQALRMSQ*GRWVEG
Trigger: CCCCTCAACCCACCTTCCCAACTGGGACATTCTCAA...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCTGCCCACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTTCGGTGTGAAAAGCTaGAGAATGTCCCAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: AAHLQPLHPGSQGWRKMGFGVKS*RMSQLG
Trigger: TCCCAACTGGGACATTCTCAAGCTTTTCACACCGAA...ACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp GGAAGGTGGGACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATGGCTACAGAAGGGATAAGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GRWDSRRDTTFSLDS*CHWLTMATEGIRRN
Trigger: ATTTCTTCTTATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS-3UTR CAA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGDTTFS*DSCCHW
Trigger: CCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTC...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GGGAGCGGAGAAGGGTGTGTGTTCGTGGGGAAGGGGACGTTAAGGCAACAGACTAAGCATTGCTCTCGATaGAGTAGGCCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: GSGEGCVFVGKGTLRQQTKHCSR*SRPALS
Trigger: AGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCTT...AGTCTGTTGCCTTAACGTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTATTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: CPARHPKCQMFLSRLHKVLLPIL*MAGGTE
Trigger: CTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAA...TACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTTTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: PCASPQMSNVSEQAPQGSLLPIL*MAGGTE
Trigger: CTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAA...ACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTAAGAGGGCTGCATACTaGTGCAAACGGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVKRAAY*CKRRLL
Trigger: CAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTT...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAAGAGGGCTGCATACTaGTGCAAACGGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQKRAAY*CKRRLL
Trigger: CAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTTCCTTCTCTAGGGACTaGAGGACGCTCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TSNLFIRVARAGGKWVRASFSRD*RTLCLS
Trigger: TGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGA...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAGACTCCTTCTCTAGGGACTaGAGGACGCTCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LSPHKVQALPATVLAERDSFSRD*RTLCLS
Trigger: TGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGA...GTCTCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CGTCAGATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RQMVEVLSVPSVVRKGGRDSRVG*ISRSGP
Trigger: TGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTC...CCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CAA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATCAGATGGTGGAGGTTTaGTCTGTCCCATCACCCAAG +
Preference number: 5 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYQMVEV*SVPSPK
Trigger: CTTGGGTGATGGGACAGACAAAACCTCCACCATCTG...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCAGATGGTGGAGGTTTaGTCTGTCCCATCACCCAAG +
Preference number: 5 (lower is better)
Translates to: AGSLPCASPQMSNVSEQAQMVEV*SVPSPK
Trigger: CTTGGGTGATGGGACAGACAAAACCTCCACCATCTG...AGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAGCTCCTCTCAATAACATTCTGGAGGGCAGGTTCTCTGCCCTGCGCGTCATTCGGTGTGAAAAGCTaGAGAATGTCCCAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: PQLLSITFWRAGSLPCASFGVKS*RMSQLG
Trigger: TCCCAACTGGGACATTCTCAAGCTTTTCACACCGAA...TGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp AGGTGGGACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCTACAGAAGGGATAAGAAGAAATATC +
Preference number: 5 (lower is better)
Translates to: RWDSRRDTTFSLDSC*HWLTMATEGIRRNI
Trigger: GATATTTCTTCTTATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS CCA 90 bp GAGGTCCAAGTGATCTTCTTGGGAAGCCCCTACCACCTCCAGAGGTaGGAAATGAGGTTAACAAAATGGCTAAGAGGGCTGGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: EVQVIFLGSPYHLQR*EMRLTKWLRGLGAV
Trigger: CACTGCACCCAGCCCTCTTAGCCATTTTGTTAACCTCATTTCCCACCTCTGGAGGTGGTAGGGGCTTCCCAAGAAGATCACTTGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS-3UTR CAA 90 bp GCCCTCTCCCCTCATAAAGTTCAGGCTCTCCCTGCCACTGTCTTGGCTGAGAGAAGAATCCTGTGGTCCTaGGAACAGAAGAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: ALSPHKVQALPATVLAERRILWS*EQKSTN
Trigger: GTTTGTGCTCTTCTGTTCCAAGGACCACAGGATTCT...TCTCTCAGCCAAGACAGTGGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CAA 90 bp ATTCCTGACTCCCAAGTCTCACCAACCAGACCTGGGAGCGGAGAAGGGTGTGTGAAGCATTGCTCTCGATaGAGTAGGCCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: IPDSQVSPTRPGSGEGCVKHCSR*SRPALS
Trigger: AGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCTT...CACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCACAGCTGGAGGGTCCTaGGCCTCGGTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVTAGGS*ASVPLS
Trigger: AGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTGT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TTGTCTGTCCCATCACCCAAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGTTGGGTGCACACTTaGCCCATCACCCGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: LSVPSPKACSVMLRHRDSSWVHT*PITRVN
Trigger: GTTTACACGGGTGATGGGCAAAGTGTGCACCCAACT...GGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGATGGGACAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCATCTCTAGTGCGGCTTaGCGCGGGAATGTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVISSAA*RGNVRR
Trigger: CCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGAT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSDSRVG*ISRSGP
Trigger: TGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTC...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 90 bp CTCTGGCCCCAAACAGTGAGAAAAGGCCCATATGCCCATAAACAGTaGCTCTGGAGTCCAGCTCTCTTCATTCAGAAGCAGGATGGTGGA +
Preference number: 5 (lower is better)
Translates to: LWPQTVRKGPYAHKQ*LWSPALFIQKQDGG
Trigger: TCCACCATCCTGCTTCTGAATGAAGAGAGCTGGACTCCAGAGGCACTGTTTATGGGCATATGGGCCTTTTCTCACTGTTTGGGGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CCA 90 bp GACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTGCTGCCACTaGCTGACGATGGCTACAGAAGGGATAAGAAGAAATATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: DSRRDTTFSLDSCCH*LTMATEGIRRNIRR
Trigger: TCTCCTGATATTTCTTCTTATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS-3UTR CAA 90 bp ACCTCCAACCTCTTCATCCGGGTAGCCAGGGCTGGAGGAAAATGGGTTAGAGCTAAGGAACTGTCTTTCTaGGCTCCAGAAGTGGACATG +
Preference number: 5 (lower is better)
Translates to: TSNLFIRVARAGGKWVRAKELSF*APEVDM
Trigger: CATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCTT...AGCTCTAACCCATTTTCCTCCAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVDTTFS*DSCCHW
Trigger: CCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTC...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGAAGCATTGCTCTCGATaGAGTAGGCCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: WRAGSLPCASPQMSNVSEKHCSR*SRPALS
Trigger: AGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCTT...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp AGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGAAGCATTGCTCTCGATaGAGTAGGCCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: RAGSLPCASPQMSNVSEQKHCSR*SRPALS
Trigger: AGAAAGTGCTGGCCTACTCAATCGAGAGCAATGCTT...CTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTAAGAGGGCTGCATACTaGTGCAAACGGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: CASPQMSNVSEQAPQGSGKRAAY*CKRRLL
Trigger: CAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTT...ACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCATGCTCAGGGCTATCTaGTGGCGGGCACCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVMLRAI*WRAPLV
Trigger: CACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCAT...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGAGTTGGGTGCACACTTaGCCCATCACCCGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: ASPQMSNVSEQAPQGSGQSWVHT*PITRVN
Trigger: GTTTACACGGGTGATGGGCAAAGTGTGCACCCAACT...CTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTGTCTCGGGACACCAGCAGTaGGGTGCACACTTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: PQMSNVSEQAPQGSGQFVSGHQQ*GAHFAH
Trigger: ATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA...GACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp ATAGGGACCAGACAGTCTGTCGGACTCTGGGGCTGGGACGAATCTCTGGGTTATTTCGGTGTGAAAAGCTaGAGAATGTCCCAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: IGTRQSVGLWGWDESLGYFGVKS*RMSQLG
Trigger: TCCCAACTGGGACATTCTCAAGCTTTTCACACCGAA...ATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS CCA 90 bp TCCCCTTGGAGAAGGAACTGTCTTTCTTGGCTCCAGAAGTGGACATaGGGTAAAGCCTGGCCAAGGATAGTCCTCTCTGGATTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SPWRRNCLSWLQKWT*GKAWPRIVLSGFLL
Trigger: CAGCAAAAATCCAGAGAGGACTATCCTTGGCCAGGCTTTACCCCATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCTTCTCCAAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS-3UTR CAA 90 bp AAAAGCTTGAGAATGTCCCAGTTGGGAAGGTGGGTTGAGGGGGAGGAGGGCGTTAGACCTGTGTTTGCATaGCTCCCAATACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: KSLRMSQLGRWVEGEEGVRPVFA*LPILLM
Trigger: CATCAACAGTATTGGGAGCAATGCAAACACAGGTCT...AACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314471.10
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAGACCTGTGTTTGCATaGCTCCCAATACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: VLCPARHPKCQMFLSRLHRPVFA*LPILLM
Trigger: CATCAACAGTATTGGGAGCAATGCAAACACAGGTCT...GTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp TGGAGGGCAGGTTCTCTGCCCTGCGCGTCACCCCAAATGTCAAATGTTTCTGAGAGACCTGTGTTTGCATaGCTCCCAATACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: WRAGSLPCASPQMSNVSERPVFA*LPILLM
Trigger: CATCAACAGTATTGGGAGCAATGCAAACACAGGTCT...CTCAGAAACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTCCTTCTCTAGGGACTaGAGGACGCTCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSSFSRD*RTLCLS
Trigger: TGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGA...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS-3UTR CAA 90 bp GATGGTGGAGGTTTTGTCTGTCCCATCTGTGGTAAGAAAGGGAGGAAGGGAGGACAGATGGTGGAGGTTTaGTCTGTCCCATCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: DGGGFVCPICGKKGRKGGQMVEV*SVPSVV
Trigger: TACCACAGATGGGACAGACAAAACCTCCACCATCTG...TCCTCCCTTCCTCCCTTTCTTACCACAGATGGGACAGACAAAACCTCCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598605.1
CDS-3UTR CAA 90 bp CGTCACCCCAAATGTCAAATGTTTCTGAGCAGGCTCCACAAGGTAGTGGTCAGTTTCTATCCCATGTGCTaGGCTGAAGTGACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RHPKCQMFLSRLHKVVVSFYPMC*AEVTEG
Trigger: TCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAA...ACTGACCACTACCTTGTGGAGCCTGCTCAGAAACATTTGACATTTGGGGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS TCA 90 bp ATAACAGAAGTCTCTCCAACAGCCCAGCAATATTGCCACCATACTTaGAGAGGTCCAAGTGATCTTCTTGGGAAGCCCCTACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: ITEVSPTAQQYCHHT*RGPSDLLGKPLPPP
Trigger: TGGAGGTGGTAGGGGCTTCCCAAGAAGATCACTTGGACCTCTTCAAGTATGGTGGCAATATTGCTGGGCTGTTGGAGAGACTTCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CCA 90 bp CTGTATCCATTTCCATCTTCTAGTATCAACACCCTGGGTTCCCCTTaGAGAAGGAACTGTCTTTCTTGGCTCCAGAAGTGGACATGGGGT +
Preference number: 5 (lower is better)
Translates to: LYPFPSSSINTLGSP*RRNCLSWLQKWTWG
Trigger: ACCCCATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCTTCTCCAAGGGGAACCCAGGGTGTTGATACTAGAAGATGGAAATGGATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS TCA 90 bp CTTCTATTTCACGGTGGAAGCCTGCTTCAGAATGAAACTAACAGATaGCAGCAAAGTCAAGAGATGGGGGAGGGGGAAAGGGAGATCTGT +
Preference number: 5 (lower is better)
Translates to: LLFHGGSLLQNETNR*QQSQEMGEGEREIC
Trigger: ACAGATCTCCCTTTCCCCCTCCCCCATCTCTTGACTTTGCTGTCATCTGTTAGTTTCATTCTGAAGCAGGCTTCCACCGTGAAATAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS GCA 90 bp CATGATGTCACCAGTTGCCACCTCTTCTATTTCACGGTGGAAGCCTaGTTCAGAATGAAACTAACAGATGACAGCAAAGTCAAGAGATGG +
Preference number: 5 (lower is better)
Translates to: HDVTSCHLFYFTVEA*FRMKLTDDSKVKRW
Trigger: CCATCTCTTGACTTTGCTGTCATCTGTTAGTTTCATTCTGAAGCAGGCTTCCACCGTGAAATAGAAGAGGTGGCAACTGGTGACATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 90 bp AAAATAAGTTCTTGGTTAGGGTTGCTCAGATTACACATCGTCTCATaGTGTCACCAGTTGCCACCTCTTCTATTTCACGGTGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KISSWLGLLRLHIVS*CHQLPPLLFHGGSL
Trigger: CAGGCTTCCACCGTGAAATAGAAGAGGTGGCAACTGGTGACATCATGAGACGATGTGTAATCTGAGCAACCCTAACCAAGAACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CCA 90 bp AAGAGCCTTGACAATTCCCATGCAAAACAGAATGCACTACTGGTCTaGTCTCTTTGTCCTCATGTGACCAAAAATGACTCCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: KSLDNSHAKQNALLV*SLCPHVTKNDSLPL
Trigger: CAAAGGCAAGGAGTCATTTTTGGTCACATGAGGACAAAGAGACCAGACCAGTAGTGCATTCTGTTTTGCATGGGAATTGTCAAGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CAA 72 bp GGCCCATCCGGCCGGGTGGGAGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTACGCCGGGCCACTCCCA +
Preference number: 6 (lower is better)
Translates to: GPSGRVGGPGEA*GTAAGYAGPLP
Trigger: TGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCGGCCGGATGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp TGCCCACCTGGTCTCGGAACATCATGGTGCCGGGCCTaGGGCCAGGGTCGGGGGACGGCGGTGGCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: CPPGLGTSWCRA*GQGRGTAVARA
Trigger: GGCCCTCGCCACCGCCGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACCAGGTGGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp GCCCATCCGGCCGGGTGGGAGGGCCCGGGGAGGCATTaGGAACTGCCGCTGGGTACGCCGGGCCACTCCCAT +
Preference number: 6 (lower is better)
Translates to: AHPAGWEGPGRH*ELPLGTPGHSH
Trigger: ATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCGGCCGGATGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 90 bp GGCTCAGGAGGCCCATCCGGCCGGGTGGGAGGGCCCGGGGAGGCATaGGGAACTGCCGCTGGGTACGCCGGGCCACTCCCATCCCCACAG +
Preference number: 6 (lower is better)
Translates to: GSGGPSGRVGGPGEA*GTAAGYAGPLPSPQ
Trigger: CTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCGGCCGGATGGGCCTCCTGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp CGGGGGACGGCGGTGGCGAGGGCCAGCGCCGTCACATaGTCCCGGCTCTGGCCTCCTGTTACCTTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: RGTAVARASAVT*SRLWPPVTFPL
Trigger: CAGGGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGCCCTCGCCACCGCCGTCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp AGCCAGCGAGGATGCCCACCTGGTCTCGGAACATCATaGTGCCGGGCCTGGGGCCAGGGTCGGGGGACGGCG +
Preference number: 6 (lower is better)
Translates to: SQRGCPPGLGTS*CRAWGQGRGTA
Trigger: CGCCGTCCCCCGACCCTGGCCCCAGGCCCGGCACCATGATGTTCCGAGACCAGGTGGGCATCCTCGCTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp GGTGGGAGGGCCCGGGGAGGCATTGGGAACTGCCGCTaGGTACGCCGGGCCACTCCCATCCCCACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: GGRARGGIGNCR*VRRATPIPTEP
Trigger: TGGCTCTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GAGGGTCAGGGTCCTGCCCATCAGAGTGGGGCCGCCTaGGTCCTGCACACTCTGCTGTCAGGTGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: EGQGPAHQSGAA*VLHTLLSGGVG
Trigger: CCCCACCCCACCTGACAGCAGAGTGTGCAGGACGCAGGCGGCCCCACTCTGATGGGCAGGACCCTGACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596271.1
CDS CCA 72 bp GTGGCGAGGGCCAGCGCCGTCACATGGTCCCGGCTCTaGCCTCCTGTTACCTTTCCCCTGAGGGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VARASAVTWSRL*PPVTFPLRARA
Trigger: AGCCCTGGCCCTCAGGGGAAAGGTAACAGGAGGCCAGAGCCGGGACCATGTGACGGCGCTGGCCCTCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp CGGGAGCGGAAGCCACTAGCCAACCGCTCTTCCAGGTaGCTCAGCCAGAGGGCCAGTGCGTTGCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RERKPLANRSSR*LSQRASALRSS
Trigger: GGAGGACCGCAACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTTGGCTAGTGGCTTCCGCTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp CGGGCAGTCTGGAGGGAACATGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGAGTGGGTGCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: RAVWREHENGLG*RVDRERVGALH
Trigger: GTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTTCCCTCCAGACTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000598605.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp TGTTCCGGCTGGAGCCCTGCTCCTCTGTCTGCTCACTaGCAGAGGAGGCCACGCTGCTCTGGGGCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: CSGWSPAPLSAH*QRRPRCSGARE
Trigger: CTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGCAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 72 bp CGCTCTTCCAGGTGGCTCAGCCAGAGGGCCAGTGCGTaGCGGTCCTCCAGTGTGGTGGCTGGGTGGATGAGG +
Preference number: 6 (lower is better)
Translates to: RSSRWLSQRASA*RSSSVVAGWMR
Trigger: CCTCATCCACCCAGCCACCACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp CACCTCACCTGGAGGGAACATGAGAATGGCCTGGGGTaGCGAGTGGACCGGGAGCGAGTGGGTGCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: HLTWREHENGLG*RVDRERVGALH
Trigger: GTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTTCCCTCCAGGTGAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS GCA 72 bp CAACCGCTCTTCCAGGTGGCTCAGCCAGAGGGCCAGTaGGTTGCGGTCCTCCAGTGTGGTGGCTGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: QPLFQVAQPEGQ*VAVLQCGGWVD
Trigger: ATCCACCCAGCCACCACACTGGAGGACCGCAACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp CTGCCATCCTCCTGGAAGGTGTTCCGGCTGGAGCCCTaGTCCTCTGTCTGCTCACTGCCAGAGGAGGCCACG +
Preference number: 6 (lower is better)
Translates to: LPSSWKVFRLEP*SSVCSLPEEAT
Trigger: CGTGGCCTCCTCTGGCAGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp CCTGGAGGGAACATGAGAATGGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTGCGCTGCACAGAGCTG +
Preference number: 6 (lower is better)
Translates to: PGGNMRMAWGDE*TGSEWVRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTTCCCTCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS CCA 72 bp GCAACGGTTGTTGGGGGAGGAGGAAGCCTGCTCACATaGGGGGAGGTCTTGGTCCAGCCACGCCTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: ATVVGGGGSLLT*GEVLVQPRLSS
Trigger: ACTGGAGAGGCGTGGCTGGACCAAGACCTCCCCCCATGTGAGCAGGCTTCCTCCTCCCCCAACAACCGTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp AGTTGGGTGCACACTTTGCCCATCACCCGTGTAAACTaGCTGGGGATGTCTCCGTCGGCGACGGGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: SWVHTLPITRVN*LGMSPSATGAG
Trigger: CCCGGCTCCCGTCGCCGACGGAGACATCCCCAGCCAGTTTACACGGGTGATGGGCAAAGTGTGCACCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp TCTGGAGGGAACATGAGAATGGCCTGGGGTGACGAGTaGACCGGGAGCGAGTGGGTGCGCTGCACAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SGGNMRMAWGDE*TGSEWVRCTEL
Trigger: CAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCATGTTCCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000598605.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp GTGCGTTGCGGTCCTCCAGTGTGGTGGCTGGGTGGATaGGGGCATAGGAAAGCAGCTGGCGACTCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: VRCGPPVWWLGG*GHRKAAGDSPR
Trigger: TCGAGGAGAGTCGCCAGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCACACTGGAGGACCGCAACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GGAGGTCGAGGCTTCAGTGAGCTGAGATCATGCCACTaGACTCCCACCTGGAGAAAGGCTGGGCACGGTGGC +
Preference number: 6 (lower is better)
Translates to: GGRGFSELRSCH*TPTWRKAGHGG
Trigger: GCCACCGTGCCCAGCCTTTCTCCAGGTGGGAGTGCAGTGGCATGATCTCAGCTCACTGAAGCCTCGACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CCA 72 bp CCAAGCTCCTCTGGACTCGGCCACTCACCAGGGACCTaGGGGCTTGTAGGGATGAGTGACATGGAGCGCTTC +
Preference number: 6 (lower is better)
Translates to: PSSSGLGHSPGT*GLVGMSDMERF
Trigger: GAAGCGCTCCATGTCACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp AGCAGGAGGGACACCACCTTCTCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCAGCACTGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SRRDTTFSLDSC*HWLTMAALLAS
Trigger: GGAGGCCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATGGCAGCACTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: DSRRDTTFSLDS*CHWLTMAALLA
Trigger: GGCCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp AGGGACACCACCTTCTCTTTGGACTCCTGCTGCCACTaGCTGACGATGGCAGCACTGTTGGCCTCCGACTCC +
Preference number: 6 (lower is better)
Translates to: RDTTFSLDSCCH*LTMAALLASDS
Trigger: GGAGTCGGAGGCCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp TCAGCTGAGGATGTTGGCCAGGCAGAGTCCCAAGGGTaGGGCACCTCACCTGGAGGGAACATGAGAATGGCC +
Preference number: 6 (lower is better)
Translates to: SAEDVGQAESQG*GTSPGGNMRMA
Trigger: GGCCATTCTCATGTTCCCTCCAGGTGAGGTGCCCCACCCTTGGGACTCTGCCTGGCCAACATCCTCAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS CAA 72 bp GGAAGGTGGGACAGCAGGAGGGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGGCTGACGATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: GRWDSRRDTTFS*DSCCHWLTMAA
Trigger: TGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp CCACTCACCAGGGACCTGGGGGCTTGTAGGGATGAGTaGCATGGAGCGCTTCAGTGGGCTAGGGTGGATTTG +
Preference number: 6 (lower is better)
Translates to: PLTRDLGACRDE*HGALQWARVDL
Trigger: CAAATCCACCCTAGCCCACTGAAGCGCTCCATGTCACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp ATACTGTTGATGGCTGGCGGCACTGAGCTGGATGGGTaGAAGGGCACGTGTCCATTTTCCCGGGGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: ILLMAGGTELDG*KGTCPFSRGGL
Trigger: CAAGCCACCCCGGGAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp CATGAGGGCACATCTTTCATGCCACTGCCATCCTCCTaGAAGGTGTTCCGGCTGGAGCCCTGCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: HEGTSFMPLPSS*KVFRLEPCSSV
Trigger: GACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGGCATGAAAGATGTGCCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 72 bp GGCCAGAGGCCGCCTGCTACTTTCTATCCCATGTGCTaGGCTGAAGTGACAGAGGGAGACCTGGGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: GQRPPATFYPMC*AEVTEGDLGEA
Trigger: TGCCTCACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGTAGCAGGCGGCCTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS CAA 72 bp GGAAGGTGGGACAGCAGGAGGGACACCACCTTCTCTTaGGACTCCTGCTGCCACTGGCTGACGATGGCTACA +
Preference number: 6 (lower is better)
Translates to: GRWDSRRDTTFS*DSCCHWLTMAT
Trigger: TGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS CAA 90 bp AAGGCGTGTTCTGTCATGCTCAGACACAGAGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCAGGAACCGGGCAGTCTGGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: KACSVMLRHRDSRVG*ISRSGPGTGQSGGN
Trigger: GTTCCCTCCAGACTGCCCGGTTCCTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000598605.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp GGTTCCCGCCTTCCAGCACATCCTTCTCTAGGGACTTaGGGACGCTCTGTCTCTCACGCAGCTTCTGGATGC +
Preference number: 6 (lower is better)
Translates to: GSRLPAHPSLGT*GRSVSHAASGC
Trigger: GCATCCAGAAGCTGCGTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGATGTGCTGGAAGGCGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp AAGGGCCAGAGGCCGCCTGCTACTTTCTATCCCATGTaGTTGGCTGAAGTGACAGAGGGAGACCTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: KGQRPPATFYPM*LAEVTEGDLGE
Trigger: CTCACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGTAGCAGGCGGCCTCTGGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS GCA 72 bp TCTGCTGCCGGTAGTTCTGCATCTCTAGTGCGGCTTTaGGCGGGAATGTCCGGAGGAGCTTCAGCACTTGCT +
Preference number: 6 (lower is better)
Translates to: SAAGSSASLVRL*AGMSGGASALA
Trigger: AGCAAGTGCTGAAGCTCCTCCGGACATTCCCGCGCAAAGCCGCACTAGAGATGCAGAACTACCGGCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp AGGGACTTGAGGACGCTCTGTCTCTCACGCAGCTTCTaGATGCTCAGGGCTATCTTGTGGCGGGCACCTTTG +
Preference number: 6 (lower is better)
Translates to: RDLRTLCLSRSF*MLRAILWRAPL
Trigger: CAAAGGTGCCCGCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGTGAGAGACAGAGCGTCCTCAAGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 90 bp TGGATTTGGCAGGGGAGACCTGTGTTTGCATTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAGCTGGATGGGTGGAAGGGCACGTGT +
Preference number: 6 (lower is better)
Translates to: WIWQGRPVFALLPIL*MAGGTELDGWKGTC
Trigger: ACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp AGGGGAGACCTGTGTTTGCATTGCTCCCAATACTGTTaGTGGCTGGCGGCACTGAGCTGGATGGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RGDLCLHCSQYC*WLAALSWMGGR
Trigger: CCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GTGACCCGTTTCAGAAGTGACAGGAGGGCCACTGTCTaGTCACACTCATTCCAGCCTTTGAACCAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: VTRFRSDRRATV*SHSFQPLNQPA
Trigger: CGCTGGCTGGTTCAAAGGCTGGAATGAGTGTGAGCAGACAGTGGCCCTCCTGTCACTTCTGAAACGGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314471.10
ENST00000594204.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000602243.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GCCTTGATGGGAGTGATGATGATCTGCTGCAGCTCCTaGAGAGCGTTTCGTAGGTTCCCGCCTTCCAGCACA +
Preference number: 6 (lower is better)
Translates to: ALMGVMMICCSS*RAFRRFPPSST
Trigger: TGTGCTGGAAGGCGGGAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCCCATCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GCTTTGCGCGGGAATGTCCGGAGGAGCTTCAGCACTTaGTGTTTCCAGGATAGCAGCCGTTTCTTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: ALRGNVRRSFST*CFQDSSRFFCV
Trigger: GACGCAGAAGAAACGGCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCTCCGGACATTCCCGCGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000595476.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS GCA 72 bp GACAGCAGGAGGGACACCACCTTCTCTTTGGACTCCTaGTGCCACTGGCTGACGATGGCTACAGAAGGGATA +
Preference number: 6 (lower is better)
Translates to: DSRRDTTFSLDS*CHWLTMATEGI
Trigger: TATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS CCA 72 bp CCAGCACTTTCTGCAGTAGCCTCATGTACTCCGACTTaGCCTCTGTGTTGCCTGGCTGAAGCAGGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: PALSAVASCTPT*PLCCLAEAGEG
Trigger: ACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAGGCTACTGCAGAAAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000599712.1
ENST00000610417.4
ENST00000611159.4
CDS CCA 72 bp GATGAGCTGGAGGTAACTGGTGATGTTCTCCTCGTCTaGTCGGGACACCAGCAGTTGGGTGCACACTTTGCC +
Preference number: 6 (lower is better)
Translates to: DELEVTGDVLLV*SGHQQLGAHFA
Trigger: GGCAAAGTGTGCACCCAACTGCTGGTGTCCCGACCAGACGAGGAGAACATCACCAGTTACCTCCAGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314471.10
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 72 bp CAGGGGAGACCTGTGTTTGCATTGCTCCCAATACTGTaGATGGCTGGCGGCACTGAGCTGGATGGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: QGRPVFALLPIL*MAGGTELDGWK
Trigger: CTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 72 bp TCTGTCATGCTCAGACACAGAGACTCCAGAGTGGGATaGATCTCCAGGTCAGGCCCAGGAACCGGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SVMLRHRDSRVG*ISRSGPGTGQS
Trigger: AGACTGCCCGGTTCCTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314471.10
ENST00000598605.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS CAA 90 bp CCATTAAAGGGCCAGAGGCCGCCTGCTACTTTCTATCCCATGTGCTaGGCTGAAGTGACAGAGGGAGACCTGGGTGAGGCATCTCACTGT +
Preference number: 6 (lower is better)
Translates to: PLKGQRPPATFYPMC*AEVTEGDLGEASHC
Trigger: ACAGTGAGATGCCTCACCCAGGTCTCCCTCTGTCACTTCAGCCAAGCACATGGGATAGAAAGTAGCAGGCGGCCTCTGGCCCTTTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS TCA 72 bp TGCATTGCTCCCAATACTGTTGATGGCTGGCGGCACTaGGCTGGATGGGTGGAAGGGCACGTGTCCATTTTC +
Preference number: 6 (lower is better)
Translates to: CIAPNTVDGWRH*AGWVEGHVSIF
Trigger: GAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCGCCAGCCATCAACAGTATTGGGAGCAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314471.10
ENST00000596319.1
ENST00000596368.1
ENST00000598913.5
ENST00000610417.4
ENST00000611159.4
CDS TCA 72 bp TATCAGGAGAGCCAGGGTGGGGTACTCCTATTCACCTaGGAGCACTGCCTATGGCCTATTCCCTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: YQESQGGVLLFT*EHCLWPIPSAP
Trigger: TGGAGCTGAGGGAATAGGCCATAGGCAGTGCTCTCAGGTGAATAGGAGTACCCCACCCTGGCTCTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS GCA 72 bp AGCAGGAGGGACACCACCTTCTCTTTGGACTCCTGCTaGCACTGGCTGACGATGGCTACAGAAGGGATAAGA +
Preference number: 6 (lower is better)
Translates to: SRRDTTFSLDSC*HWLTMATEGIR
Trigger: TCTTATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS CCA 72 bp CAATTGGGGGAGATGGGTGCAGAGTGGTGTGAGGTATaGGGAGAGGTGCCAATGCAGTCTAGAAGAACAGTG +
Preference number: 6 (lower is better)
Translates to: QLGEMGAEWCEV*GEVPMQSRRTV
Trigger: CACTGTTCTTCTAGACTGCATTGGCACCTCTCCCCATACCTCACACCACTCTGCACCCATCTCCCCCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595476.1
CDS TCA 72 bp AGAAGAGGGCTGCATACTTGTGCAAACGGAGGCTCTTaGGCCATGAGGGCACATCTGTGTTTGCATTGCTCC +
Preference number: 6 (lower is better)
Translates to: RRGLHTCANGGS*AMRAHLCLHCS
Trigger: GGAGCAATGCAAACACAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600018.1
CDS CCA 72 bp CCTTGGAGAAGGAACTGTCTTTCTTGGCTCCAGAAGTaGACATGGGGTAAAGCCTGGCCAAGGATAGTCCTC +
Preference number: 6 (lower is better)
Translates to: PWRRNCLSWLQK*TWGKAWPRIVL
Trigger: GAGGACTATCCTTGGCCAGGCTTTACCCCATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCTTCTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS CAA 72 bp GAGAAGAGGGCTGCATACTTGTGCAAACGGAGGCTCTaGAGCCATGAGGGCACATCTGTGTTTGCATTGCTC +
Preference number: 6 (lower is better)
Translates to: EKRAAYLCKRRL*SHEGTSVFALL
Trigger: GAGCAATGCAAACACAGATGTGCCCTCATGGCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600018.1
CDS CAA 90 bp ACCAAGCTGAGATTTTCAAGGCCAGGCAGTCTGGCTTCAGAGCTCTaGCTTGCTCTTAACAATGCAAGAAAGCTGGGCATGGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: TKLRFSRPGSLASEL*LALNNARKLGMVAH
Trigger: GTGAGCCACCATGCCCAGCTTTCTTGCATTGTTAAGAGCAAGCAAGAGCTCTGAAGCCAGACTGCCTGGCCTTGAAAATCTCAGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 72 bp CCAGCAATATTGCCACCATACTTGAAGAGGTCCAAGTaGTCTTCTTGGGAAGCCCCTACCACCTCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: PAILPPYLKRSK*SSWEAPTTSRG
Trigger: ACCTCTGGAGGTGGTAGGGGCTTCCCAAGAAGATCACTTGGACCTCTTCAAGTATGGTGGCAATATTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 72 bp CACGGTGGAAGCCTGCTTCAGAATGAAACTAACAGATaGCAGCAAAGTCAAGAGATGGGGGAGGGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: HGGSLLQNETNR*QQSQEMGEGER
Trigger: CCTTTCCCCCTCCCCCATCTCTTGACTTTGCTGTCATCTGTTAGTTTCATTCTGAAGCAGGCTTCCACCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS GCA 72 bp AGGATAGTCCTCTCTGGATTTTTGCTGGAACTACTGTaGCCCATTCTGCCTCATCTGCCCAGTAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RIVLSGFLLELL*PILPHLPSRKE
Trigger: CTCCTTCCTACTGGGCAGATGAGGCAGAATGGGGCACAGTAGTTCCAGCAAAAATCCAGAGAGGACTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS CCA 72 bp AGAAGGAACTGTCTTTCTTGGCTCCAGAAGTGGACATaGGGTAAAGCCTGGCCAAGGATAGTCCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RRNCLSWLQKWT*GKAWPRIVLSG
Trigger: TCCAGAGAGGACTATCCTTGGCCAGGCTTTACCCCATGTCCACTTCTGGAGCCAAGAAAGACAGTTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS CCA 72 bp AGGGACACCACCTTCTCTTTGGACTCCTGCTGCCACTaGCTGACGATGGCTACAGAAGGGATAAGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: RDTTFSLDSCCH*LTMATEGIRRN
Trigger: ATTTCTTCTTATCCCTTCTGTAGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596319.1
CDS CAA 72 bp TTTCAAGGCCAGGCAGTCTGGCTTCAGAGCTCTTGCTaGCTCTTAACAATGCAAGAAAGCTGGGCATGGTGG +
Preference number: 6 (lower is better)
Translates to: FQGQAVWLQSSC*LLTMQESWAWW
Trigger: CCACCATGCCCAGCTTTCTTGCATTGTTAAGAGCAAGCAAGAGCTCTGAAGCCAGACTGCCTGGCCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 72 bp GTCTCTCCAACAGCCCAGCAATATTGCCACCATACTTaGAGAGGTCCAAGTGATCTTCTTGGGAAGCCCCTA +
Preference number: 6 (lower is better)
Translates to: VSPTAQQYCHHT*RGPSDLLGKPL
Trigger: TAGGGGCTTCCCAAGAAGATCACTTGGACCTCTTCAAGTATGGTGGCAATATTGCTGGGCTGTTGGAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 72 bp AAGTTAAGTCACTTTGCCCAAGACTGTACACCAAGCTaGGATTTTCAAGGCCAGGCAGTCTGGCTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: KLSHFAQDCTPS*DFQGQAVWLQS
Trigger: GCTCTGAAGCCAGACTGCCTGGCCTTGAAAATCTCAGCTTGGTGTACAGTCTTGGGCAAAGTGACTTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS GCA 72 bp TGCTCAGATTACACATCGTCTCATGATGTCACCAGTTaGCACCTCTTCTATTTCACGGTGGAAGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CSDYTSSHDVTS*HLFYFTVEACF
Trigger: GAAGCAGGCTTCCACCGTGAAATAGAAGAGGTGGCAACTGGTGACATCATGAGACGATGTGTAATCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CCA 72 bp TTTCCATCTTCTAGTATCAACACCCTGGGTTCCCCTTaGAGAAGGAACTGTCTTTCTTGGCTCCAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: FPSSSINTLGSP*RRNCLSWLQKW
Trigger: CCACTTCTGGAGCCAAGAAAGACAGTTCCTTCTCCAAGGGGAACCCAGGGTGTTGATACTAGAAGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314471.10
ENST00000601613.1
CDS TCA 72 bp TCTTGGTTAGGGTTGCTCAGATTACACATCGTCTCATaGTGTCACCAGTTGCCACCTCTTCTATTTCACGGT +
Preference number: 6 (lower is better)
Translates to: SWLGLLRLHIVS*CHQLPPLLFHG
Trigger: ACCGTGAAATAGAAGAGGTGGCAACTGGTGACATCATGAGACGATGTGTAATCTGAGCAACCCTAACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS GCA 72 bp ATGGAGCAACTGAGGCACAGAGAAGTTAAGTCACTTTaGCCAAGACTGTACACCAAGCTGAGATTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: MEQLRHREVKSL*PRLYTKLRFSR
Trigger: CCTTGAAAATCTCAGCTTGGTGTACAGTCTTGGGCAAAGTGACTTAACTTCTCTGTGCCTCAGTTGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS GCA 72 bp ACCAGTTGCCACCTCTTCTATTTCACGGTGGAAGCCTaGTTCAGAATGAAACTAACAGATGACAGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: TSCHLFYFTVEA*FRMKLTDDSKV
Trigger: GACTTTGCTGTCATCTGTTAGTTTCATTCTGAAGCAGGCTTCCACCGTGAAATAGAAGAGGTGGCAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS TCA 72 bp CCATTCTGCCTCATCTGCCCAGTAGGAAGGAGTCTATaGTATCATCATCAAGAGATGTTTCTTCAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: PFCLICPVGRSL*YHHQEMFLQRL
Trigger: CAGCCTTTGAAGAAACATCTCTTGATGATGATATCATAGACTCCTTCCTACTGGGCAGATGAGGCAGAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314471.10
CDS CCA 72 bp AGAATGAAACTAACAGATGACAGCAAAGTCAAGAGATaGGGGAGGGGGAAAGGGAGATCTGTTCACATGATT +
Preference number: 6 (lower is better)
Translates to: RMKLTDDSKVKR*GRGKGRSVHMI
Trigger: AATCATGTGAACAGATCTCCCTTTCCCCCTCCCCCATCTCTTGACTTTGCTGTCATCTGTTAGTTTCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CAA 90 bp AGTCCTCTCTGGATTTTTGCTGGAACTACTAAGGAAAATAAGTTCTaGGTTAGGGTTGCTCAGATTACACATCGTCTCATGATGTCACCA +
Preference number: 6 (lower is better)
Translates to: SPLWIFAGTTKENKF*VRVAQITHRLMMSP
Trigger: TGGTGACATCATGAGACGATGTGTAATCTGAGCAACCCTAACCAAGAACTTATTTTCCTTAGTAGTTCCAGCAAAAATCCAGAGAGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601613.1
CDS CAA 72 bp TGGATTTTTGCTGGAACTACTAAGGAAAATAAGTTCTaGGTTAGGGTTGCTCAGATTACACATCGTCTCATG +
Preference number: 6 (lower is better)
Translates to: WIFAGTTKENKF*VRVAQITHRLM
Trigger: CATGAGACGATGTGTAATCTGAGCAACCCTAACCAAGAACTTATTTTCCTTAGTAGTTCCAGCAAAAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601613.1