RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164483

Ensembl transcript IDs: ENST00000324172.10, ENST00000368134.6, ENST00000437477.6, ENST00000439090.7, ENST00000457563.6, ENST00000463253.2, ENST00000524930.1, ENST00000526886.5, ENST00000528422.5, ENST00000529119.1, ENST00000529723.1, ENST00000531544.5, ENST00000532309.5, ENST00000532763.5, ENST00000533296.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: HWVKPQPSSSRKGWA*SRALTTSLYCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 90 bp CAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: QLHWVKPQPSSSRKG*ACSRALTTSLYCWV
Trigger: CACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR TCA 90 bp GAGCATCCTGAGGGTCTGTTTTTATCAGGACAGAAAGCAGAGATCTaGCAGGGCCAGGTAAGGCTGGAGGCCCAGACCTCAAAGCCAGAC +
Preference number: 1 (lower is better)
Translates to: EHPEGLFLSGQKAEI*QGQVRLEAQTSKPD
Trigger: GTCTGGCTTTGAGGTCTGGGCCTCCAGCCTTACCTGGCCCTGTCAGATCTCTGCTTTCTGTCCTGATAAAAACAGACCCTCAGGATGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 90 bp GTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATCCCTGTAATCTCGAGCTGCTTCTGT +
Preference number: 1 (lower is better)
Translates to: VFSWIERWHLLPMPG*TGGLFIPVISSCFC
Trigger: ACAGAAGCAGCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 90 bp CAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTTCATCCCTGTAATCTCGAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: QGFQLDRKMASAPHA*LDWRTLHPCNLELL
Trigger: AAGCAGCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR TCA 90 bp TTTGAAATCCAGGAGACAGGCAGGTTCAAACAGCAAACTTTGTGTTaGAACGTCAGCGGCAGTGGTTCTCAGCCGTGGTTGTACATTAGA +
Preference number: 1 (lower is better)
Translates to: FEIQETGRFKQQTLC*NVSGSGSQPWLYIR
Trigger: TCTAATGTACAACCACGGCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCTGTCTCCTGGATTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
3UTR TCA 90 bp TCCTCATGCTGTGATCCGGGCACTTCTGCTCTGCTAACATGCATTTaGCATCATAGGGAAACTCTGGTAAAACATAGGACTTCGTCCACT +
Preference number: 1 (lower is better)
Translates to: SSCCDPGTSALLTCI*HHRETLVKHRTSST
Trigger: AGTGGACGAAGTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACAGCATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR GCA 90 bp ATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGCATCTGCTCCCCATaGCTGGCTGGACTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: IQERVGLQQGINHVIVLLGICSP*LAGLED
Trigger: GTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCC...CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp AGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGCCCCAGAGAATTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RQQLHWVKPQPSSSRKGWPQRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGG...CCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR GCA 90 bp AGCCAGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGCTGCCCCAGAGAATTaGTTGAACCCAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: SQTTAPLGEATAILIQERAAPEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGC...CCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp CCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTT +
Preference number: 2 (lower is better)
Translates to: PSSSRKGWACSRALTTSLSAPHA*LDWRTL
Trigger: AAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGA...CAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp AGCCAGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGCTTATCCTCATGCTGTaGTCCGGGCACTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SQTTAPLGEATAILIQERLILML*SGHFCS
Trigger: AGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAG...CCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGGTGCTGGGGTACAGTaGGCCTTCCAGATACTTAGT +
Preference number: 2 (lower is better)
Translates to: AILIQERVGLQQGINHVIGAGVQ*AFQILS
Trigger: ACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACC...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp AGCCAGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGACGTCATTGTACTGCTaGGTGCTGGGGTACAGTGAG +
Preference number: 2 (lower is better)
Translates to: SQTTAPLGEATAILIQERTSLYC*VLGYSE
Trigger: CTCACTGTACCCCAGCACCCAGCAGTACAATGACGT...CCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CAA 90 bp TCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATaGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCCAGATACTTA +
Preference number: 2 (lower is better)
Translates to: SSRKGWACSRALTTS*YCWVLGYSEPSRYL
Trigger: TAAGTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp AAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTGCTGAGCTGGATAGAAAGATaGCATCTGCTCCCCATGCCT +
Preference number: 2 (lower is better)
Translates to: KGWACSRALTTSLYCWVLSWIER*HLLPMP
Trigger: AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT...CAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR GCA 90 bp AGCCAGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGCCTGTAATCTCGAGCTaGTTCTGTTTGCATGACCAG +
Preference number: 2 (lower is better)
Translates to: SQTTAPLGEATAILIQERPVISS*FCLHDQ
Trigger: CTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGG...CCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGGGGACTTCAGTCCTTaGGTGTTCTGCTTGTATTTT +
Preference number: 2 (lower is better)
Translates to: AILIQERVGLQQGINHVIGDFSP*VFCLYF
Trigger: AAAATACAAGCAGAACACTCAAGGACTGAAGTCCCC...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTCCTGGAGAAACTCAATaGTCCTTATCCTCATGCTGT +
Preference number: 2 (lower is better)
Translates to: AILIQERVGLQQGINHVIPGETQ*SLSSCC
Trigger: ACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGG...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp ATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATCTCCATCAGAACAGCCTaGTGCCCAATTTTCTTTACC +
Preference number: 2 (lower is better)
Translates to: IERWHLLPMPGWTGGLFISIRTA*CPIFFT
Trigger: GGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGA...GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp ATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATC +
Preference number: 2 (lower is better)
Translates to: ILSHVGLEKLNDPYPHAVLPMPG*TGGLFI
Trigger: GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAG...CACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CCA 90 bp ATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGATCAAGGTTTTCAGCTaGATAGAAAGATGGCATCTG +
Preference number: 2 (lower is better)
Translates to: IQERVGLQQGINHVIVLLIKVFS*IERWHL
Trigger: CAGATGCCATCTTTCTATCCAGCTGAAAACCTTGAT...CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR GCA 90 bp AGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTT +
Preference number: 2 (lower is better)
Translates to: RQQLHWVKPQPSSSRKGWSTVML*FLLEFV
Trigger: AACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGA...CCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR TCA 90 bp TTAATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCCCCAGAGAATTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LIQSESLGILMCNQSLELPQRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGG...CAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
3UTR-3UTR CCA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTTGGCAACATAGAGTGTaGTCTCTCTACTCCAACACC +
Preference number: 2 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPWQHRV*SLYSNT
Trigger: GGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCA...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR TCA 90 bp TTTCCTCACTTCTCTAACAGGCTGATTTCTTTAACAGTGCACGTTGAAATGAGGGCTGGAAACAGCTGCTaGCTGTTGACTTCAAGATGT +
Preference number: 2 (lower is better)
Translates to: FPHFSNRLISLTVHVEMRAGNSC*LLTSRC
Trigger: ACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGC...CCTCATTTCAACGTGCACTGTTAAAGAAATCAGCCTGTTAGAGAAGTGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR GCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTAAAGAGCGTATGCTATaGTTCCTTTACCACACCAGT +
Preference number: 2 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSKERML*FLYHTS
Trigger: ACTGGTGTGGTAAAGGAAGCATAGCATACGCTCTTT...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR TCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAATTTAACAGTGCACGTTaGAATGAGGCAACTAGTGAG +
Preference number: 2 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKFNSAR*NEATSE
Trigger: CTCACTAGTTGCCTCATTTCAACGTGCACTGTTAAA...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR GCA 90 bp CAATTAGTCCATTATCAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCATCAGAACAGCCTGGTaGCCAATTTTCTTTACCAGT +
Preference number: 2 (lower is better)
Translates to: QLVHYQGFQLDRKMASAPIRTAW*PIFFTS
Trigger: ACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGAT...GGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR GCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAAGAGATGCTCAGGTGTaGAGGTTTCTTTTAGGGTAT +
Preference number: 2 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKRDAQV*RFLLGY
Trigger: ATACCCTAAAAGAAACCTGCACACCTGAGCATCTCT...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR GCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGAGTTAATGGAGGGCCGTaGTCAAGGAGGAATCAAAGA +
Preference number: 2 (lower is better)
Translates to: KYPLRREEPNKLVACHNRVNGGP*SRRNQR
Trigger: TCTTTGATTCCTCCTTGAGCACGGCCCTCCATTAAC...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR CCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTTTACAGAACAGCAGCTaGAAACAGCTGCTGACTGTT +
Preference number: 2 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCLQNSS*KQLLTV
Trigger: AACAGTCAGCAGCTGTTTCCAGCTGCTGTTCTGTAA...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR CCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTTTACCACACCAGTTTTaGCAACATAGAGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCLPHQF*QHRVWS
Trigger: AGACCACACTCTATGTTGCCAAAACTGGTGTGGTAA...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR GCA 90 bp TCAAAGAAAGTAGACATGAAGCACGAAAGAGATCACTTCAGGCCAAGAAATACATGTATAAAGAGCGTATaGTATGCTTCCTTTACCACA +
Preference number: 2 (lower is better)
Translates to: SKKVDMKHERDHFRPRNTCIKSV*YASFTT
Trigger: TGTGGTAAAGGAAGCATAGCATACGCTCTTTATACA...TGTATTTCTTGGCCTGAAGTGATCTCTTTCGTGCTTCATGTCTACTTTCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR CAA 90 bp ACTCTGGTAAAACATAGGACTTCGTCCACTGTAATGCTTTGCTTCTaGCTAGAATTTGTTTCACATTTCTTCTCTGTTTCAATACTCTTT +
Preference number: 2 (lower is better)
Translates to: TLVKHRTSSTVMLCF*LEFVSHFFSVSILF
Trigger: AAAGAGTATTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTTTACCAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CAA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGCCCCAGAGAATTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: AILIQERVGLQQGINHVIAPENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGC...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR GCA 72 bp TGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTaGTGGGTGCTGGGGTACAGTGAGCCTTCCAGATAC +
Preference number: 3 (lower is better)
Translates to: WACSRALTTSLY*WVLGYSEPSRY
Trigger: GTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 72 bp TGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTAC +
Preference number: 3 (lower is better)
Translates to: WVKPQPSSSRKG*ACSRALTTSLY
Trigger: GTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CAA 90 bp TTAACCACGTCATTGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCCAGATACTGCTGCCCCAGAGAATaGCTTGAACCCAGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: LTTSLYCWVLGYSEPSRYCCPRE*LEPRRR
Trigger: CCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGCA...GTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 72 bp TGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATCCCTGTAATCTCGAGC +
Preference number: 3 (lower is better)
Translates to: WIERWHLLPMPG*TGGLFIPVISS
Trigger: GCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CCA 72 bp GCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTaGGTGCTGGGGTACAGTGAGCCTTCCAGATACTTA +
Preference number: 3 (lower is better)
Translates to: ACSRALTTSLYC*VLGYSEPSRYL
Trigger: TAAGTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR TCA 72 bp GCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTaGTCCGGGCACTTCTGCTCTGCTAACATGCATTTG +
Preference number: 3 (lower is better)
Translates to: AWRNSMILILML*SGHFCSANMHL
Trigger: CAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CAA 90 bp CAATTAGTCCATTATCAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCTCGAGCTGCTTCTGTTaGCATGACCAGGGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: QLVHYQGFQLDRKMASAPSSCFC*HDQGCL
Trigger: AAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGA...GGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CAA 90 bp AGATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTGGGGACTTCAGTCCTaGAGTGTTCTGCTTGTATTT +
Preference number: 3 (lower is better)
Translates to: RYLVMSAWRNSMILILMLWGLQS*SVLLVF
Trigger: AAATACAAGCAGAACACTCAAGGACTGAAGTCCCCA...CAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR TCA 72 bp TGTGATCCGGGCACTTCTGCTCTGCTAACATGCATTTaGCATCATAGGGAAACTCTGGTAAAACATAGGACT +
Preference number: 3 (lower is better)
Translates to: CDPGTSALLTCI*HHRETLVKHRT
Trigger: AGTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR GCA 72 bp GGAAGTGACTTTTCCAAGCACAGAGATGCTCAGGTGTaGAGGTTTCTTTTAGGGTATTTCCTCACTTCTCTA +
Preference number: 3 (lower is better)
Translates to: GSDFSKHRDAQV*RFLLGYFLTSL
Trigger: TAGAGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAGTCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR GCA 72 bp AAAATAATTTGGCACTGTCTTACAGAGTTGAATATCTaGACACCCTGTGAGCCAGTGAGCCAGCAAATCCAC +
Preference number: 3 (lower is better)
Translates to: KIIWHCLTELNI*TPCEPVSQQIH
Trigger: GTGGATTTGCTGGCTCACTGGCTCACAGGGTGTGCAGATATTCAACTCTGTAAGACAGTGCCAAATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR-3UTR CAA 90 bp ATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTGGTCCACTGTAATGCTTaGCTTCTTGCTAGAATTTGT +
Preference number: 3 (lower is better)
Translates to: ILSHVGLEKLNDPYPHAVVHCNA*LLARIC
Trigger: ACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGAC...CACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR-3UTR CAA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTTTACTGATGGGCAAATaGAGACCCTCAAAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCLLMGK*RPSKGK
Trigger: CTTCCCCTTTGAGGGTCTCAATTTGCCCATCAGTAA...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR GCA 72 bp GGTGAGTGGAAAAGAAATCAGATGATTAACGAGTGCTaGTCAGGGAGCTTAATCATCCAGGAAAATAATTTG +
Preference number: 3 (lower is better)
Translates to: GEWKRNQMINEC*SGSLIIQENNL
Trigger: CAAATTATTTTCCTGGATGATTAAGCTCCCTGAGCAGCACTCGTTAATCATCTGATTTCTTTTCCACTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR GCA 72 bp AAATTAATTCAATCTGAATCTCTAGGAATCCTAATGTaGAACCAGAGCTTAGAACTGCTGCCCCAGAGAATT +
Preference number: 3 (lower is better)
Translates to: KLIQSESLGILM*NQSLELLPQRI
Trigger: AATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAATTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp CCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGCCCCAGAGAATTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSSRKGWACSRALTTSLPQRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGG...CAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp GATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATGGCATCTGCTCCCCATaGCTGGCTGGACTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: DRKMASAPHAWLDWRTLHGICSP*LAGLED
Trigger: GTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCC...ATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACG +
Preference number: 4 (lower is better)
Translates to: AILIQERVGLQQGINHVIRKGWA*SRALTT
Trigger: CGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCT...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CAA 72 bp AAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATaGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KGWACSRALTTS*YCWVLGYSEPS
Trigger: GGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp CCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGAACAGCTCCACTGGGTaGAGCCACAGCCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PSSSRKGWACSRALTTSLNSSTG*SHSHPH
Trigger: ATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTT...CAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp AGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCATACTCCAGCCTGAGTaGGAGAGCGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SWIERWHLLPMPGWTGGLILQPE*ESETPS
Trigger: AGACGGAGTCTCGCTCTCTCACTCAGGCTGGAGTAT...GAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTAGACAACAGCTCCACTaGGTGAAGCCACAGCCATCC +
Preference number: 4 (lower is better)
Translates to: AILIQERVGLQQGINHVIRQQLH*VKPQPS
Trigger: GGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCT...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp AGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCCTTATCCTCATGCTGTaGTCCGGGCACTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SWIERWHLLPMPGWTGGLLILML*SGHFCS
Trigger: AGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAG...GAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTACCACGTCATTGTACTaGTGGGTGCTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: AILIQERVGLQQGINHVITTSLY*WVLGYS
Trigger: ACTGTACCCCAGCACCCAGCAGTACAATGACGTGGT...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTGGCATCTGCTCCCCATaGCTGGCTGGACTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LGILMCNQSLELLPQRIAGICSP*LAGLED
Trigger: GTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCC...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp GATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATTGTACTGCTGGGTGCTaGGGTACAGTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DRKMASAPHAWLDWRTLHCTAGC*GTVSLP
Trigger: TGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACA...ATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp ATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGACGTCATTGTACTGCTaGGTGCTGGGGTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: IQERVGLQQGINHVIVLLTSLYC*VLGYSE
Trigger: CTCACTGTACCCCAGCACCCAGCAGTACAATGACGT...CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCCCCAGAGAATTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSPQRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGG...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp TTAACCACGTCATTGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCCAGATACCATGCCTGGCTGGACTaGAGGACTCTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LTTSLYCWVLGYSEPSRYHAWLD*RTLHPC
Trigger: ACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATG...GTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
3UTR CAA 72 bp GGAAGCCAAACACAGTACCATTGTATTCCCAATAGATaGGAAGTGGGGTGGTGGCATTGCATGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSQTQYHCIPNR*EVGWWHCMGVG
Trigger: CCCCACCCCCATGCAATGCCACCACCCCACTTCCAATCTATTGGGAATACAATGGTACTGTGTTTGGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTGCTGCCTGGAGAAACTCAATaGTCCTTATCCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: KGWACSRALTTSLYCWVLPGETQ*SLSSCC
Trigger: ACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGG...CAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCACACCCTGTGAGCCAGTaGGCCAGCAAATCCACTCCT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAHPVSQ*ASKSTP
Trigger: AGGAGTGGATTTGCTGGCTCACTGGCTCACAGGGTG...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp ATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATCAACCAACTGCAGACCTaGTCAACTGACCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IERWHLLPMPGWTGGLFINQLQT*STDQVS
Trigger: GGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTT...GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTGGCATCTGCTCCCCATaGCTGGCTGGACTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSGICSP*LAGLED
Trigger: GTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCC...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACG +
Preference number: 4 (lower is better)
Translates to: LGILMCNQSLELLPQRIARKGWA*SRALTT
Trigger: CGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCT...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTGCTGCCCCAGAGAATTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LGILMCNQSLELLPQRIAAAPEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGC...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp CATCAGAACAGCCTGGTGCCCAATTTTCTTTACCAGTTGCTGAACCATCCGATCGCTGCCCCAGAGAATTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HQNSLVPNFLYQLLNHPIAAPEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGC...GATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LGILMCNQSLELLPQRIALPMPG*TGGLFI
Trigger: GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAG...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp CCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGCTGCTAACATGCATTTaGCATCATAGGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: PSSSRKGWACSRALTTSLLLTCI*HHRETL
Trigger: CAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAG...CAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCTCTCCACCAACCAACTaGAGACCTGCTCAACTGACC +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSSPPTN*RPAQLT
Trigger: GGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGA...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp TTAACCACGTCATTGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCCAGATACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LTTSLYCWVLGYSEPSRYHPIIK*KKSGPT
Trigger: AGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATG...GTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCGAGCTGCTTCTGTTTaGATGACCAGGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSRAASV*MTRAAF
Trigger: AAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCG...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp ATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATCCCTGTAATCTCGAGCTaGTTCTGTTTGCATGACCAG +
Preference number: 4 (lower is better)
Translates to: IERWHLLPMPGWTGGLFIPVISS*FCLHDQ
Trigger: CTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGG...GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTTGTACTGCTGGGTGCTaGGGTACAGTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGILMCNQSLELLPQRIACTAGC*GTVSLP
Trigger: TGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACA...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCACGTCATTGTACTGCTaGGTGCTGGGGTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSTSLYC*VLGYSE
Trigger: CTCACTGTACCCCAGCACCCAGCAGTACAATGACGT...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp CATCAGAACAGCCTGGTGCCCAATTTTCTTTACCAGTTGCTGAACCATCCGATCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: HQNSLVPNFLYQLLNHPISSRKG*ACSRAL
Trigger: TAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGA...GATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp TCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGCTTATCCTCATGCTGTaGTCCGGGCACTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SESLGILMCNQSLELLPQLILML*SGHFCS
Trigger: AGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAG...CTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAGGTGCTGGGGTACAGTaGGCCTTCCAGATACTTAGT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAGAGVQ*AFQILS
Trigger: ACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACC...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCATATCTGCACACCCTGTaGGCCAGTGAGCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAYLHTL*ASEPAN
Trigger: ATTTGCTGGCTCACTGGCTCACAGGGTGTGCAGATA...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACG +
Preference number: 4 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPRKGWA*SRALTT
Trigger: CGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCT...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp GATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATTCCATCAGAACAGCCTaGTGCCCAATTTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: DRKMASAPHAWLDWRTLHSIRTA*CPIFFT
Trigger: GGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGA...ATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp AGATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RYLVMSAWRNSMILILMLLPMPG*TGGLFI
Trigger: GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAG...CAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp AGATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RYLVMSAWRNSMILILMLSAPHA*LDWRTL
Trigger: AAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGA...CAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAATTGGAAGTGGGGTGGTaGCATTGCATGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKLEVGW*HCMGVG
Trigger: CCCCACCCCCATGCAATGCCACCACCCCACTTCCAA...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AGGCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCACAGCAAACTTTGTGTTaGAACGTCAGCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RQVQTANFVLKRQRQWFSQQTLC*NVSGSG
Trigger: ACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTG...TGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAAACCAACTGCAGACCTaGTCAACTGACCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSANQLQT*STDQVS
Trigger: GGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTT...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp AGGCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCACATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RQVQTANFVLKRQRQWFSHPIIK*KKSGPT
Trigger: AGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATG...TGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCACATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAHPIIK*KKSGPT
Trigger: AGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATG...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCCTGTAATCTCGAGCTaGTTCTGTTTGCATGACCAG +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSPVISS*FCLHDQ
Trigger: CTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGG...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp TGTGCAATGAAGACAGTGGTCTTTGAAATCCAGGAGACAGGCAGGTTCAAACAGCATTGTACTGCTGGGTaGTGGGGTACAGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CAMKTVVFEIQETGRFKQHCTAG*WGTVSL
Trigger: AAGGCTCACTGTACCCCAGCACCCAGCAGTACAATG...CTGTTTGAACCTGCCTGTCTCCTGGATTTCAAAGACCACTGTCTTCATTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp AAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCGTGGTTGTACATTAACCACGTCATTGTACTaGTGGGTGCTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: KLCVETSAAVVLSRGCTLTTSLY*WVLGYS
Trigger: ACTGTACCCCAGCACCCAGCAGTACAATGACGTGGT...TAATGTACAACCACGGCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAGGTGGTGGCATTGCATaGGGGTGGGGTGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKGGGIA*GWGEWK
Trigger: TTTCCACTCACCCCACCCCCATGCAATGCCACCACC...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCGGGGACTTCAGTCCTTaGGTGTTCTGCTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSGDFSP*VFCLYF
Trigger: AAAATACAAGCAGAACACTCAAGGACTGAAGTCCCC...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp AAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCGTGGTTGTACATTAAACCAACTGCAGACCTaGTCAACTGACCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KLCVETSAAVVLSRGCTLNQLQT*STDQVS
Trigger: GGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTT...TAATGTACAACCACGGCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCGAGCTGCTTCTGTTTaGATGACCAGGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSRAASV*MTRAAF
Trigger: AAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp AGATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGCATTGTACTGCTGGGTaGTGGGGTACAGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RYLVMSAWRNSMILILMLHCTAG*WGTVSL
Trigger: AAGGCTCACTGTACCCCAGCACCCAGCAGTACAATG...CAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAGTTAATGGAGGGCCGTaGTCAAGGAGGAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAVNGGP*SRRNQR
Trigger: TCTTTGATTCCTCCTTGAGCACGGCCCTCCATTAAC...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGTCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: IQSESLGILMCNQSLELLSAPHA*LDWRTL
Trigger: AAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGA...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp GATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATATCAAGGTTTTCAGCTaGATAGAAAGATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DRKMASAPHAWLDWRTLHIKVFS*IERWHL
Trigger: CAGATGCCATCTTTCTATCCAGCTGAAAACCTTGAT...ATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAGCCAGGGACATACAATaGTACCCAATCCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAARDIQ*YPILYH
Trigger: ATGGTACAGGATTGGGTACCATTGTATGTCCCTGGC...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp CTTTACCACACCAGTTTTGGCAACATAGAGTGTGGTCTCTCTACTCCAACACCAGCTGGAAACAGCTGCTaGCTGTTGACTTCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LYHTSFGNIECGLSTPTPAGNSC*LLTSRC
Trigger: ACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGC...TGGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCAAAACTGGTGTGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CAATTAGTCCATTATCAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCTCTCCACCAACCAACTaGAGACCTGCTCAACTGACC +
Preference number: 4 (lower is better)
Translates to: QLVHYQGFQLDRKMASAPSPPTN*RPAQLT
Trigger: GGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGA...GGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp CAATTAGTCCATTATCAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCCGAGCTGCTTCTGTTTaGATGACCAGGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QLVHYQGFQLDRKMASAPRAASV*MTRAAF
Trigger: AAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCG...GGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp CTTTACCACACCAGTTTTGGCAACATAGAGTGTGGTCTCTCTACTCCAACACCAAGGCACACACAATGGTaGAGGCAGTGTTCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LYHTSFGNIECGLSTPTPRHTQW*RQCSSS
Trigger: AGAACTAGAACACTGCCTGCACCATTGTGTGTGCCT...TGGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCAAAACTGGTGTGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: IQSESLGILMCNQSLELLSSRKG*ACSRAL
Trigger: TAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGA...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCTCAGGCACACACAATaGTGCAGGCAGTGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSLRHTQ*CRQCSS
Trigger: ACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCTTCTTTACCAGTTGCTaGACCATCCGATCATTAAGT +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSFFTSC*TIRSLS
Trigger: ACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAA...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp TGTGCAATGAAGACAGTGGTCTTTGAAATCCAGGAGACAGGCAGGTTCAAACAGCCTGGAGAAACTCAATaGTCCTTATCCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: CAMKTVVFEIQETGRFKQPGETQ*SLSSCC
Trigger: ACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGG...CTGTTTGAACCTGCCTGTCTCCTGGATTTCAAAGACCACTGTCTTCATTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGGGTGCTGGGGTACAGTaGGCCTTCCAGATACTTAGT +
Preference number: 4 (lower is better)
Translates to: IQSESLGILMCNQSLELLGAGVQ*AFQILS
Trigger: ACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACC...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTACAGCTGCTGACTGTTaGCTTCAAGATGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSTAADC*LQDVCL
Trigger: GAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGT...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAAAAGAGCGTATGCTATaGTTCCTTTACCACACCAGT +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAKERML*FLYHTS
Trigger: ACTGGTGTGGTAAAGGAAGCATAGCATACGCTCTTT...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCAGACCCTATTCTCCTaGCTCAGAAGCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSQTLFS*LRSTDH
Trigger: ATGATCAGTGCTTCTGAGGCAGGAGAATAGGGTCTG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp TGTGCAATGAAGACAGTGGTCTTTGAAATCCAGGAGACAGGCAGGTTCAAACAGTCCATCAGAACAGCCTaGTGCCCAATTTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: CAMKTVVFEIQETGRFKQSIRTA*CPIFFT
Trigger: GGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGA...CTGTTTGAACCTGCCTGTCTCCTGGATTTCAAAGACCACTGTCTTCATTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGACTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRLPMPG*TGGLFI
Trigger: GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAG...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRSAPHA*LDWRTL
Trigger: AAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAAGCTGGATAGAAAGATaGCATCTGCTCCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKSWIER*HLLPMP
Trigger: AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp GCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCATCAAGGTTTTCAGCTaGATAGAAAGATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: AGSNSKLCVETSAAVVLSIKVFS*IERWHL
Trigger: CAGATGCCATCTTTCTATCCAGCTGAAAACCTTGAT...GCTGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AGGCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCATTAGTCATGTCGGCCTaGAGAAACTCAATGATCCTT +
Preference number: 4 (lower is better)
Translates to: RQVQTANFVLKRQRQWFSLVMSA*RNSMIL
Trigger: AAGGATCATTGAGTTTCTCCAGGCCGACATGACTAA...TGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAACCAATAGATTGGAAGTaGGGTGGTGGCATTGCATGG +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKPIDWK*GGGIAW
Trigger: CCATGCAATGCCACCACCCCACTTCCAATCTATTGG...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
3UTR CAA 72 bp TCATCCAGGAAAATAATTTGGCACTGTCTTACAGAGTaGAATATCTGCACACCCTGTGAGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRKIIWHCLTE*NICTPCEPVSQ
Trigger: CTGGCTCACTGGCTCACAGGGTGTGCAGATATTCAACTCTGTAAGACAGTGCCAAATTATTTTCCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AGATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGGGGGACTTCAGTCCTTaGGTGTTCTGCTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: RYLVMSAWRNSMILILMLGDFSP*VFCLYF
Trigger: AAAATACAAGCAGAACACTCAAGGACTGAAGTCCCC...CAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp TGTGCAATGAAGACAGTGGTCTTTGAAATCCAGGAGACAGGCAGGTTCAAACAGCTGCTAACATGCATTTaGCATCATAGGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: CAMKTVVFEIQETGRFKQLLTCI*HHRETL
Trigger: CAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAG...CTGTTTGAACCTGCCTGTCTCCTGGATTTCAAAGACCACTGTCTTCATTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR TCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCCTGGAGAAACTCAATaGTCCTTATCCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSPGETQ*SLSSCC
Trigger: ACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp TGTGCAATGAAGACAGTGGTCTTTGAAATCCAGGAGACAGGCAGGTTCAAACAGATCAGAACAGCCTGGTaGCCAATTTTCTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: CAMKTVVFEIQETGRFKQIRTAW*PIFFTS
Trigger: ACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGAT...CTGTTTGAACCTGCCTGTCTCCTGGATTTCAAAGACCACTGTCTTCATTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR GCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAATTCATCCTCTCGAGCTaGTTCTGTTTGCATGACCAG +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKFILSS*FCLHDQ
Trigger: CTGGTCATGCAAACAGAAGCAGCTCGAGAGGATGAA...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CTTTACCACACCAGTTTTGGCAACATAGAGTGTGGTCTCTCTACTCCAACACCAATGATTAACGAGTGCTaGTCAGGGAGCTTAATCATC +
Preference number: 4 (lower is better)
Translates to: LYHTSFGNIECGLSTPTPMINEC*SGSLII
Trigger: GATGATTAAGCTCCCTGAGCAGCACTCGTTAATCAT...TGGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCAAAACTGGTGTGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp TTAATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCATGCCTGGCTGGACTaGAGGACTCTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LIQSESLGILMCNQSLELHAWLD*RTLHPC
Trigger: ACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATG...CAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATGTACTGCTGGGTGCTaGGGTACAGTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRCTAGC*GTVSLP
Trigger: TGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCSSRKG*ACSRAL
Trigger: TAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGA...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTCATGCCTGGCTGGACTaGAGGACTCTTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCHAWLD*RTLHPL
Trigger: GAGAGGATGAAGAGTCCTCCAGTCCAGCCAGGCATG...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTTTACAGAACAGCAGCTaGAAACAGCTGCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSLQNSS*KQLLTV
Trigger: AACAGTCAGCAGCTGTTTCCAGCTGCTGTTCTGTAA...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGAAGATTGGAAGTGGGGTaGTGGCATTGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRRLEVG*WHCMGV
Trigger: CACCCCCATGCAATGCCACCACCCCACTTCCAATCT...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCTGCTAACATGCATTTaGCATCATAGGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPLLTCI*HHRETL
Trigger: CAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAG...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGACTTATCCTCATGCTGTaGTCCGGGCACTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRLILML*SGHFCS
Trigger: AGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAG...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AGCCTCTCCCTTTCTAAATATAAAGAAAATTCGCAGACCTCCATGTTGAAAGGGAGTCGTCCACCTTTGTaGGCCTCTCCCTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: SLSLSKYKENSQTSMLKGSRPPL*ASPFLN
Trigger: ATTTAGAAAGGGAGAGGCTCACAAAGGTGGACGACT...CCCTTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR TCA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTTTTAACAGTGCACGTTaGAATGAGGCAACTAGTGAG +
Preference number: 4 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSFNSAR*NEATSE
Trigger: CTCACTAGTTGCCTCATTTCAACGTGCACTGTTAAA...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTCATTGTACTGCTGGGTaGTGGGGTACAGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCHCTAG*WGTVSL
Trigger: AAGGCTCACTGTACCCCAGCACCCAGCAGTACAATG...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTACCACGTCATTGTACTaGTGGGTGCTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCTTSLY*WVLGYS
Trigger: ACTGTACCCCAGCACCCAGCAGTACAATGACGTGGT...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTACGTCATTGTACTGCTaGGTGCTGGGGTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCTSLYC*VLGYSE
Trigger: CTCACTGTACCCCAGCACCCAGCAGTACAATGACGT...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTTTACCACACCAGTTTTaGCAACATAGAGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPLPHQF*QHRVWS
Trigger: AGACCACACTCTATGTTGCCAAAACTGGTGTGGTAA...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCATCCAGGAAAATAATTTaGCACTGTCTTACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSASRKII*HCLTEL
Trigger: CAACTCTGTAAGACAGTGCCAAATTATTTTCCTGGA...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAGTATTCCCAATAGATTaGAAGTGGGGTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKVFPID*KWGGGI
Trigger: AATGCCACCACCCCACTTCCAATCTATTGGGAATAC...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp AAGGCTGTAACACAGTCGTCCACCTTTGTGAGCCTCTCCCTTTCTAAATATAAAGAAGTTGGAATTCTCTaGACATCTGATAAGGGCACT +
Preference number: 4 (lower is better)
Translates to: KAVTQSSTFVSLSLSKYKEVGIL*TSDKGT
Trigger: AGTGCCCTTATCAGATGTTCAGAGAATTCCAACTTC...TTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGACGACTGTGTTACAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR CCA 90 bp TTAATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGAGCTGGATAGAAAGATaGCATCTGCTCCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LIQSESLGILMCNQSLELSWIER*HLLPMP
Trigger: AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT...CAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTTTCTAAATATAAAGAAAATTCGCAGACCTCCATGTTGAAAGGGCTTCCAACACAGGTGTaGACACTTGCACATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SLSLSKYKENSQTSMLKGLPTQV*TLAHFN
Trigger: GTTGAAATGTGCAAGTGTCCACACCTGTGTTGGAAG...CCCTTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR TCA 90 bp CAATTAGTCCATTATCAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCTTCTTTACCAGTTGCTaGACCATCCGATCATTAAGT +
Preference number: 4 (lower is better)
Translates to: QLVHYQGFQLDRKMASAPFFTSC*TIRSLS
Trigger: ACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAA...GGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTAATAAGCAAAAGACATaGACAGACACTTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPNKQKT*TDTLQR
Trigger: CCTCTGTAAAGTGTCTGTTCATGTCTTTTGCTTATT...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp TTTCCTCACTTCTCTAACAGGCTGATTTCTTTAACAGTGCACGTTGAAATGAGGATCAGAACAGCCTGGTaGCCAATTTTCTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: FPHFSNRLISLTVHVEMRIRTAW*PIFFTS
Trigger: ACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGAT...CCTCATTTCAACGTGCACTGTTAAAGAAATCAGCCTGTTAGAGAAGTGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CTTTACCACACCAGTTTTGGCAACATAGAGTGTGGTCTCTCTACTCCAACACCATCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LYHTSFGNIECGLSTPTPSTVML*FLLEFV
Trigger: AACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGA...TGGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCAAAACTGGTGTGGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp CTTCTCTGTTTCAATACTCTTTGGTCAATTAGTCCATTATCAAGGTTTTCAGCTAGCTGGATAGAAAGATaGCATCTGCTCCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LLCFNTLWSISPLSRFSASWIER*HLLPMP
Trigger: AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCT...AGCTGAAAACCTTGATAATGGACTAATTGACCAAAGAGTATTGAAACAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAATCAAGGTTTTCAGCTaGATAGAAAGATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKIKVFS*IERWHL
Trigger: CAGATGCCATCTTTCTATCCAGCTGAAAACCTTGAT...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATGGCAACATAGAGTGTaGTCTCTCTACTCCAACACC +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRWQHRV*SLYSNT
Trigger: GGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp AGGACTTCGTCCACTGTAATGCTTTGCTTCTTGCTAGAATTTGTTTCACATTTCATCAGAACAGCCTGGTaGCCAATTTTCTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: RTSSTVMLCFLLEFVSHFIRTAW*PIFFTS
Trigger: ACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGAT...GAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR GCA 90 bp ATACTTAGTCATGTCGGCCTGGAGAAACTCAATGATCCTTATCCTCATGCTGTGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: ILSHVGLEKLNDPYPHAVSTVML*FLLEFV
Trigger: AACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGA...CACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATCCATCAGAACAGCCTaGTGCCCAATTTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRSIRTA*CPIFFT
Trigger: GGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp AGGACTTCGTCCACTGTAATGCTTTGCTTCTTGCTAGAATTTGTTTCACATTTCTTAGTCATGTCGGCCTaGAGAAACTCAATGATCCTT +
Preference number: 4 (lower is better)
Translates to: RTSSTVMLCFLLEFVSHFLVMSA*RNSMIL
Trigger: AAGGATCATTGAGTTTCTCCAGGCCGACATGACTAA...GAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR TCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTGGAAAAGAAATCAGATaGTTAACGAGTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCGKEIR*LTSAAQ
Trigger: CTGAGCAGCACTCGTTAATCATCTGATTTCTTTTCC...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp CTCTCCCTTTCTAAATATAAAGAAAATTCGCAGACCTCCATGTTGAAAGGGTTTACAGGTGTGGACACTTaGACATTTCAACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSLSKYKENSQTSMLKGFTGVDT*TFQHVF
Trigger: GAAGACATGTTGAAATGTGCAAGTGTCCACACCTGT...AAACCCTTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATTAGTCATGTCGGCCTaGAGAAACTCAATGATCCTT +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNRLVMSA*RNSMIL
Trigger: AAGGATCATTGAGTTTCTCCAGGCCGACATGACTAA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CCA 90 bp TTTCCTCACTTCTCTAACAGGCTGATTTCTTTAACAGTGCACGTTGAAATGAGGCATAACAGCCAACACTaGAAACAAATCAAATATCCG +
Preference number: 4 (lower is better)
Translates to: FPHFSNRLISLTVHVEMRHNSQH*KQIKYP
Trigger: CGGATATTTGATTTGTTTCCAGTGTTGGCTGTTATG...CCTCATTTCAACGTGCACTGTTAAAGAAATCAGCCTGTTAGAGAAGTGAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTTTCTTTACCAGTTGCTaGACCATCCGATCATTAAGT +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCFFTSC*TIRSLS
Trigger: ACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAA...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR TCA 90 bp GTGAGCCTCTCCCTTTCTAAATATAAAGAAAATTCGCAGACCTCCATGTTGAAATGGATTGTCCACCACTaGAAAAGAAGTCAGTATATT +
Preference number: 4 (lower is better)
Translates to: VSLSLSKYKENSQTSMLKWIVHH*KRSQYI
Trigger: AATATACTGACTTCTTTTTCAGTGGTGGACAATCCA...TTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR TCA 90 bp ATAAAGTTTCTAGATAACTTCCACCTGATCAGACTGATGGGATTAACACAGTGTACTGAACAACCTGGATaGATTCCAGTGACATTACAT +
Preference number: 4 (lower is better)
Translates to: IKFLDNFHLIRLMGLTQCTEQPG*IPVTLH
Trigger: ATGTAATGTCACTGGAATTCATCCAGGTTGTTCAGT...ACACTGTGTTAATCCCATCAGTCTGATCAGGTGGAAGTTATCTAGAAACTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR GCA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: IQSESLGILMCNQSLELLSTVML*FLLEFV
Trigger: AACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGA...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CCA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGAGAATTTGTTTTAGGCTaGGGTAGTGAAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: KYPLRREEPNKLVACHNREFVLG*GSEGKF
Trigger: GAATTTTCCTTCACTACCCCAGCCTAAAACAAATTC...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 90 bp ACTCCAGCGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TPAKPQPSSSRKGWA*SRALTTSLYCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCGCTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp AGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGGCCCCAGAGAATTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RQQLHWVKPQPSSSRKGWAPENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGC...CCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CAA 90 bp AGCCAGACAACAGCTCCACTGGGTGAAGCCACAGCCATCCTCATCCAGGAAAGGTGCTGCCCCAGAGAATaGCTTGAACCCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SQTTAPLGEATAILIQERCCPRE*LEPRRR
Trigger: CCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGCA...CCTTTCCTGGATGAGGATGGCTGTGGCTTCACCCAGTGGAGCTGTTGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS CCA 90 bp CACTATACTCCAGCGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HYTPAKPQPSSSRKG*ACSRALTTSLYCWV
Trigger: CACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCGCTGGAGTATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp GCCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGCATTAACCACGTCATaGTACTGCTGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AILIQERVGLQQGINHVIALTTS*YCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGC...AATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS GCA 90 bp CATAAAAAGAAGCCACAGCCATCCTCATCCAGGAAAGGGTGGGCCTaGAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HKKKPQPSSSRKGWA*SRALTTSLYCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS-3UTR CAA 90 bp ATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGTCGAGCTGCTTCTGTTaGCATGACCAGGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: IQERVGLQQGINHVIVLLSSCFC*HDQGCL
Trigger: AAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGA...CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS CCA 90 bp CGTTTCCATAAAAAGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTACTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RFHKKKPQPSSSRKG*ACSRALTTSLYCWV
Trigger: CACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTTATGGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS-3UTR CAA 90 bp AGGCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCAGCCCCAGAGAATTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RQVQTANFVLKRQRQWFSAPENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAATTCTCTGGGGC...TGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp AGGCAGGTTCAAACAGCAAACTTTGTGTTGAAACGTCAGCGGCAGTGGTTCTCATGCTGCCCCAGAGAATaGCTTGAACCCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RQVQTANFVLKRQRQWFSCCPRE*LEPRRR
Trigger: CCGCCTCCTGGGTTCAAGCAATTCTCTGGGGCAGCA...TGAGAACCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGTTTGAACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS GCA 90 bp CTGAACCTCTCGTTGGCTTTGATGTTTGGAGTCGAACATCCGCACTaGTCATCGAAGACCCCCGTGCTTCAGTTCCCTCTGTCTTCCATT +
Preference number: 5 (lower is better)
Translates to: LNLSLALMFGVEHPH*SSKTPVLQFPLSSI
Trigger: AATGGAAGACAGAGGGAACTGAAGCACGGGGGTCTTCGATGAGCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGAGAGGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CCA 90 bp GTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATCCTCTCGAGCTGCTTCTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: VFSWIERWHLLPMPG*TGGLFILSSCFCLH
Trigger: ATGCAAACAGAAGCAGCTCGAGAGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS CCA 90 bp CAAGGTTTTCAGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTTCATCCTCTCGAGCTGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QGFQLDRKMASAPHA*LDWRTLHPLELLLF
Trigger: AAACAGAAGCAGCTCGAGAGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp CCATCCTCATCCAGGAAAGGGTGGGCCTGCAGCAGGGCATTAACCACGTCATTGTGGGGACTTCAGTCCTaGAGTGTTCTGCTTGTATTT +
Preference number: 5 (lower is better)
Translates to: PSSSRKGWACSRALTTSLWGLQS*SVLLVF
Trigger: AAATACAAGCAGAACACTCAAGGACTGAAGTCCCCA...CAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CAA 90 bp AATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTTGAACCCAGGATCGAGCTGCTTCTGTTaGCATGACCAGGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: NVQPELRTAAPENCLNPGSSCFC*HDQGCL
Trigger: AAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGA...TCCTGGGTTCAAGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS GCA 90 bp GGCAAATCCGATCAGTGGATGTGGTTCTGGTTCCTTTGTTTTATCTaGTTTCTTCCATGCTATGCCGTGCCTCCTGTGGCACCATCTGCC +
Preference number: 5 (lower is better)
Translates to: GKSDQWMWFWFLCFI*FLPCYAVPPVAPSA
Trigger: GGCAGATGGTGCCACAGGAGGCACGGCATAGCATGGAAGAAAGCAGATAAAACAAAGGAACCAGAACCACATCCACTGATCGGATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529119.1
CDS TCA 90 bp GTCATCACCGTCTTTGCCGAATTAGAGACGACATATTTTACTCTGTaGACAGGCCAGTCTCCACTCACTGGATGTTTGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: VITVFAELETTYFTL*TGQSPLTGCLGSRR
Trigger: CCTCCTTGACCCCAAACATCCAGTGAGTGGAGACTGGCCTGTTCACAGAGTAAAATATGTCGTCTCTAATTCGGCAAAGACGGTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS-3UTR CAA 90 bp CTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGAGAATTGCTACAGCAAACTTTGTGTaGAAACGTCAGCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGILMCNQSLELLPQRIATANFV*KRQRQW
Trigger: CCACTGCCGCTGACGTTTCAACACAAAGTTTGCTGT...AGCAATTCTCTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp CTTTACCACACCAGTTTTGGCAACATAGAGTGTGGTCTCTCTACTCCAACACCACAGCAAGAGATTTCCTaGTCTGGCCTCTTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: LYHTSFGNIECGLSTPTPQQEIS*SGLFGV
Trigger: GACACCGAAGAGGCCAGACAAGGAAATCTCTTGCTG...TGGTGTTGGAGTAGAGAGACCACACTCTATGTTGCCAAAACTGGTGTGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS TCA 90 bp AAATCCATCAGAACAGCCTGGTGCCCAATTTTCTTTACCAGTTGCTaGACCATCCGATCATTAAGTGCAAGAAGAGCGGCCCCACTTACT +
Preference number: 5 (lower is better)
Translates to: KSIRTAWCPIFFTSC*TIRSLSARRAAPLT
Trigger: AGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000524930.1
ENST00000529723.1
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS GCA 90 bp GGTGGCAGAGGCAGAAGAAAATCTGCATGTAAGTGGACGGATTATTaGTGGAGAGGCTTTTGGTCCATCTCTTCCAGAAGAGAAGATCAA +
Preference number: 5 (lower is better)
Translates to: GGRGRRKSACKWTDY*WRGFWSISSRREDQ
Trigger: TTGATCTTCTCTTCTGGAAGAGATGGACCAAAAGCCTCTCCAGCAATAATCCGTCCACTTACATGCAGATTTTCTTCTGCCTCTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437477.6
ENST00000529119.1
CDS CCA 90 bp AGAAAATCTGCATGTAAGTGGACGGATTATTGCTGGAGAGGCTTTTaGTCCATCTCTTCCAGAAGAGAAGATCAAAGGAGAGAGCACCCC +
Preference number: 5 (lower is better)
Translates to: RKSACKWTDYCWRGF*SISSRREDQRREHP
Trigger: GGGGTGCTCTCTCCTTTGATCTTCTCTTCTGGAAGAGATGGACCAAAAGCCTCTCCAGCAATAATCCGTCCACTTACATGCAGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437477.6
ENST00000529119.1
CDS CCA 90 bp GGCAGAGGCAGAAGAAAATCTGCATGTAAGTGGACGGATTATTGCTaGAGAGGCTTTTGGTCCATCTCTTCCAGAAGAGAAGATCAAAGG +
Preference number: 5 (lower is better)
Translates to: GRGRRKSACKWTDYC*RGFWSISSRREDQR
Trigger: CCTTTGATCTTCTCTTCTGGAAGAGATGGACCAAAAGCCTCTCCAGCAATAATCCGTCCACTTACATGCAGATTTTCTTCTGCCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437477.6
ENST00000529119.1
CDS-3UTR CAA 90 bp ATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTGGACTGGAGGACTCTTCATCAATTTTCTTTACCAGTaGCTGAACCATCCGATCATT +
Preference number: 5 (lower is better)
Translates to: IERWHLLPMPGWTGGLFINFLYQ*LNHPII
Trigger: AATGATCGGATGGTTCAGCAACTGGTAAAGAAAATT...GATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CAA 90 bp TTTCCTCACTTCTCTAACAGGCTGATTTCTTTAACAGTGCACGTTGAAATGAGGTCGAGCTGCTTCTGTTaGCATGACCAGGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: FPHFSNRLISLTVHVEMRSSCFC*HDQGCL
Trigger: AAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGA...CCTCATTTCAACGTGCACTGTTAAAGAAATCAGCCTGTTAGAGAAGTGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp TTAACCACGTCATTGTACTGCTGGGTGCTGGGGTACAGTGAGCCTTCCAGATACGTCCACTGTAATGCTTaGCTTCTTGCTAGAATTTGT +
Preference number: 5 (lower is better)
Translates to: LTTSLYCWVLGYSEPSRYVHCNA*LLARIC
Trigger: ACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGAC...GTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CAA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGGCATTAACCACGTCATaGTACTGCTGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: IQSESLGILMCNQSLELLALTTS*YCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGC...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp AACAGCAGCTGGAAACAGCTGCTGACTGTTGACTTCAAGATGTCTGTCTCAGCAGGGATTAACACAGTGTaGGTGGGTTGTATTCTAGAC +
Preference number: 5 (lower is better)
Translates to: NSSWKQLLTVDFKMSVSAGINTV*VGCILD
Trigger: GTCTAGAATACAACCCACCAACACTGTGTTAATCCC...TGCTGAGACAGACATCTTGAAGTCAACAGTCAGCAGCTGTTTCCAGCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 90 bp TTGGAGAGCGGAATTGGCCTGCATATATACAGTCATCACCGTCTTTaGCGAATTAGAGACGACATATTTTACTCTGTGAACAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LESGIGLHIYSHHRL*RIRDDIFYSVNRPV
Trigger: GACTGGCCTGTTCACAGAGTAAAATATGTCGTCTCTAATTCGGCAAAGACGGTGATGACTGTATATATGCAGGCCAATTCCGCTCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CCA 90 bp AGCCTGACAGAGATACTTAGTAAACTGGTTAACCCCTTAGTAGACTaGTTAACCCCTTGCTTCTCCTGGCTAGGAGAAGGAGATTGTAAC +
Preference number: 5 (lower is better)
Translates to: SLTEILSKLVNPLVD*LTPCFSWLGEGDCN
Trigger: GTTACAATCTCCTTCTCCTAGCCAGGAGAAGCAAGGGGTTAACCAGTCTACTAAGGGGTTAACCAGTTTACTAAGTATCTCTGTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533296.5
CDS-3UTR CAA 90 bp CTTTTCCAAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTTTACTGATGGGCAAATaGAGACCCTCAAAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LFQAQRCSGVQVSFRVFPLLMGK*RPSKGK
Trigger: CTTCCCCTTTGAGGGTCTCAATTTGCCCATCAGTAA...AGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 90 bp GTGCCCAATTTTCTTTACCAGTTGCTGAACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACTTACTTCTTCCTCTTGAAATCTATG +
Preference number: 5 (lower is better)
Translates to: VPNFLYQLLNHPIIK*KKSGPTYFFLLKSM
Trigger: CATAGATTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS GCA 90 bp ATACTTAGTAAACTGGTTAACCCCTTAGTAGACTGGTTAACCCCTTaGTTCTCCTGGCTAGGAGAAGGAGATTGTAACTTGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: ILSKLVNPLVDWLTP*FSWLGEGDCNLLLL
Trigger: GAGAAGCAGCAAGTTACAATCTCCTTCTCCTAGCCAGGAGAAGCAAGGGGTTAACCAGTCTACTAAGGGGTTAACCAGTTTACTAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533296.5
CDS-3UTR CAA 90 bp TCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGCCCCAGGTCCACTGTAATGCTTaGCTTCTTGCTAGAATTTGT +
Preference number: 5 (lower is better)
Translates to: SESLGILMCNQSLELLPQVHCNA*LLARIC
Trigger: ACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGAC...CTGGGGCAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGAGCATTAACCACGTCATaGTACTGCTGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KYPLRREEPNKLVACHNRALTTS*YCWVLG
Trigger: CCCCAGCACCCAGCAGTACAATGACGTGGTTAATGC...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCACTGTCTTACAGAGTaGAATATCTGCACACCCTGT +
Preference number: 5 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSHCLTE*NICTPC
Trigger: ACAGGGTGTGCAGATATTCAACTCTGTAAGACAGTG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 90 bp GTGCCCAATTTTCTTTACCAGTTGCTGAACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACTTACTTCTTCCTTGAAATCTATGAA +
Preference number: 5 (lower is better)
Translates to: VPNFLYQLLNHPIIK*KKSGPTYFFLEIYE
Trigger: TTCATAGATTTCAAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS-3UTR CAA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAACTGACCAGGTTTCCATaGCTGTCTCCTGTAAATACA +
Preference number: 5 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKLTRFP*LSPVNT
Trigger: TGTATTTACAGGAGACAGCAATGGAAACCTGGTCAG...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp TTTCCTCACTTCTCTAACAGGCTGATTTCTTTAACAGTGCACGTTGAAATGAGGTGTATTCCCAATAGATaGGAAGTGGGGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: FPHFSNRLISLTVHVEMRCIPNR*EVGWWH
Trigger: ATGCCACCACCCCACTTCCAATCTATTGGGAATACA...CCTCATTTCAACGTGCACTGTTAAAGAAATCAGCCTGTTAGAGAAGTGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp AAGCACAGAGATGCTCAGGTGTGCAGGTTTCTTTTAGGGTATTTCCTCACTTCTCAACCTTGTCTTTCCTaGTCAAAAGACACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KHRDAQVCRFLLGYFLTSQPCLS*SKDTRK
Trigger: CTTTCTGGTGTCTTTTGACAAGGAAAGACAAGGTTG...AGAAGTGAGGAAATACCCTAAAAGAAACCTGCACACCTGAGCATCTCTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp GGAAAACTCAGGCACACACAATGGTGCAGGCAGTGTTCTAGTTCTAAAGTTAAAGTCCACTGTAATGCTTaGCTTCTTGCTAGAATTTGT +
Preference number: 5 (lower is better)
Translates to: GKLRHTQWCRQCSSSKVKVHCNA*LLARIC
Trigger: ACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGAC...TTTAACTTTAGAACTAGAACACTGCCTGCACCATTGTGTGTGCCTGAGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp TTAATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGTGGGGACTTCAGTCCTaGAGTGTTCTGCTTGTATTT +
Preference number: 5 (lower is better)
Translates to: LIQSESLGILMCNQSLELWGLQS*SVLLVF
Trigger: AAATACAAGCAGAACACTCAAGGACTGAAGTCCCCA...CAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS-3UTR CAA 90 bp AAGGCTGTAACACAGTCGTCCACCTTTGTGAGCCTCTCCCTTTCTAAATATAAATCTTGCAATACAATATaGATTGGATTGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: KAVTQSSTFVSLSLSKYKSCNTI*IGLSTT
Trigger: AGTGGTGGACAATCCAATCAATATTGTATTGCAAGA...TTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGACGACTGTGTTACAGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR CAA 90 bp CTCTCCCTTTCTAAATATAAAGAAAATTCGCAGACCTCCATGTTGAAAGGGTTTCACAGGTGTGGACACTaGCACATTTCAACATGTCTT +
Preference number: 5 (lower is better)
Translates to: LSLSKYKENSQTSMLKGFHRCGH*HISTCL
Trigger: AAGACATGTTGAAATGTGCAAGTGTCCACACCTGTG...AAACCCTTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463253.2
CDS-3UTR CAA 90 bp ATTCAATCTGAATCTCTAGGAATCCTAATGTGCAACCAGAGCTTAGAACTGCTGAATTTTCTTTACCAGTaGCTGAACCATCCGATCATT +
Preference number: 5 (lower is better)
Translates to: IQSESLGILMCNQSLELLNFLYQ*LNHPII
Trigger: AATGATCGGATGGTTCAGCAACTGGTAAAGAAAATT...CAGCAGTTCTAAGCTCTGGTTGCACATTAGGATTCCTAGAGATTCAGATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS GCA 90 bp AGGGAAACTCTGGTAAAACATAGGACTTCGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTTTCACATTTCTCTGTTTCAATACTC +
Preference number: 5 (lower is better)
Translates to: RETLVKHRTSSTVML*FLLEFVSHFSVSIL
Trigger: GAGTATTGAAACAGAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTTTACCAGAGTTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528422.5
ENST00000529723.1
ENST00000532309.5
CDS-3UTR CAA 90 bp TCAAAGAAAGTAGACATGAAGCACGAAAGAGATCACTTCAGGCCAAGAAATACAATCCAGGAAAATAATTaGGCACTGTCTTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: SKKVDMKHERDHFRPRNTIQENN*ALSYRV
Trigger: AACTCTGTAAGACAGTGCCAAATTATTTTCCTGGAT...TGTATTTCTTGGCCTGAAGTGATCTCTTTCGTGCTTCATGTCTACTTTCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGAAATTTTCTTTACCAGTaGCTGAACCATCCGATCATT +
Preference number: 5 (lower is better)
Translates to: KYPLRREEPNKLVACHNRNFLYQ*LNHPII
Trigger: AATGATCGGATGGTTCAGCAACTGGTAAAGAAAATT...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS-3UTR CAA 90 bp AAATATCCGTTAAGAAGAGAAGAGCCAAATAAACTGGTTGCCTGTCACAATAGATATTTAAAGCGATCTTaGAGGGCTCGTTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: KYPLRREEPNKLVACHNRYLKRS*RARFHK
Trigger: TTTATGGAAACGAGCCCTCAAAGATCGCTTTAAATA...TCTATTGTGACAGGCAACCAGTTTATTTGGCTCTTCTCTTCTTAACGGATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 72 bp GAGTCGAACATCCGCACTGCTCATCGAAGACCCCCGTaGTTCAGTTCCCTCTGTCTTCCATTTCCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: ESNIRTAHRRPP*FSSLCLPFPPP
Trigger: GGGCGGGGGAAATGGAAGACAGAGGGAACTGAAGCACGGGGGTCTTCGATGAGCAGTGCGGATGTTCGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CCA 72 bp CCAGCGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTAC +
Preference number: 6 (lower is better)
Translates to: PAKPQPSSSRKG*ACSRALTTSLY
Trigger: GTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324172.10
CDS CCA 72 bp CAGCTGGATAGAAAGATGGCATCTGCTCCCCATGCCTaGCTGGACTGGAGGACTCTTCATCCTCTCGAGCTG +
Preference number: 6 (lower is better)
Translates to: QLDRKMASAPHA*LDWRTLHPLEL
Trigger: CAGCTCGAGAGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS CCA 72 bp TGGATAGAAAGATGGCATCTGCTCCCCATGCCTGGCTaGACTGGAGGACTCTTCATCCTCTCGAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: WIERWHLLPMPG*TGGLFILSSCF
Trigger: GAAGCAGCTCGAGAGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532763.5
CDS GCA 72 bp TCGTTGGCTTTGATGTTTGGAGTCGAACATCCGCACTaGTCATCGAAGACCCCCGTGCTTCAGTTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SLALMFGVEHPH*SSKTPVLQFPL
Trigger: CAGAGGGAACTGAAGCACGGGGGTCTTCGATGAGCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CAA 90 bp GGATGTTTGGGGTCAAGGAGGAGTAACCTGAACCTCTCGTTGGCTTaGATGTTTGGAGTCGAACATCCGCACTGCTCATCGAAGACCCCC +
Preference number: 6 (lower is better)
Translates to: GCLGSRRSNLNLSLA*MFGVEHPHCSSKTP
Trigger: GGGGGTCTTCGATGAGCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGAGAGGTTCAGGTTACTCCTCCTTGACCCCAAACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CCA 72 bp AAAAAGAAGCCACAGCCATCCTCATCCAGGAAAGGGTaGGCCTGCAGCAGGGCATTAACCACGTCATTGTAC +
Preference number: 6 (lower is better)
Translates to: KKKPQPSSSRKG*ACSRALTTSLY
Trigger: GTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS CAA 72 bp GGGTCAAGGAGGAGTAACCTGAACCTCTCGTTGGCTTaGATGTTTGGAGTCGAACATCCGCACTGCTCATCG +
Preference number: 6 (lower is better)
Translates to: GSRRSNLNLSLA*MFGVEHPHCSS
Trigger: CGATGAGCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGAGAGGTTCAGGTTACTCCTCCTTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CAA 90 bp CTCACTGGATGTTTGGGGTCAAGGAGGAGTAACCTGAACCTCTCGTaGGCTTTGATGTTTGGAGTCGAACATCCGCACTGCTCATCGAAG +
Preference number: 6 (lower is better)
Translates to: LTGCLGSRRSNLNLS*ALMFGVEHPHCSSK
Trigger: CTTCGATGAGCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGAGAGGTTCAGGTTACTCCTCCTTGACCCCAAACATCCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CAA 72 bp TGTTTGGGGTCAAGGAGGAGTAACCTGAACCTCTCGTaGGCTTTGATGTTTGGAGTCGAACATCCGCACTGC +
Preference number: 6 (lower is better)
Translates to: CLGSRRSNLNLS*ALMFGVEHPHC
Trigger: GCAGTGCGGATGTTCGACTCCAAACATCAAAGCCAACGAGAGGTTCAGGTTACTCCTCCTTGACCCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS TCA 72 bp AGAACAGCCTGGTGCCCAATTTTCTTTACCAGTTGCTaGACCATCCGATCATTAAGTGCAAGAAGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RTAWCPIFFTSC*TIRSLSARRAA
Trigger: GGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000524930.1
ENST00000529723.1
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS TCA 72 bp GGTGATACTGGGTTCATATTTCTGAATGGCAGCAACTaGGCAGTGGCTGCCCCATTGAAAGACAGCAAGACT +
Preference number: 6 (lower is better)
Translates to: GDTGFIFLNGSN*AVAAPLKDSKT
Trigger: AGTCTTGCTGTCTTTCAATGGGGCAGCCACTGCTCAGTTGCTGCCATTCAGAAATATGAACCCAGTATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439090.7
CDS CAA 90 bp TCTCCACCAACCAACTGCAGACCTGCTCAACTGACCAGGTTTCCATaGCTGTCTCCTGTAAATACACCTGTAGAGCAAAAGGTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SPPTNCRPAQLTRFP*LSPVNTPVEQKVRE
Trigger: TTCTCTGACCTTTTGCTCTACAGGTGTATTTACAGGAGACAGCAATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533296.5
CDS TCA 72 bp GTCTTTGCCGAATTAGAGACGACATATTTTACTCTGTaGACAGGCCAGTCTCCACTCACTGGATGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: VFAELETTYFTL*TGQSPLTGCLG
Trigger: CCCCAAACATCCAGTGAGTGGAGACTGGCCTGTTCACAGAGTAAAATATGTCGTCTCTAATTCGGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS GCA 72 bp GAACTAGCTCTCCTAAATTTTTCTCCACCAACCAACTaGAGACCTGCTCAACTGACCAGGTTTCCATTGCTG +
Preference number: 6 (lower is better)
Translates to: ELALLNFSPPTN*RPAQLTRFPLL
Trigger: CAGCAATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAGCTAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000524930.1
ENST00000529723.1
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS CAA 72 bp AGGCAAATCCGATCAGTGGATGTGGTTCTGGTTCCTTaGTTTTATCCTGAGGATCACCAGCTCTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: RQIRSVDVVLVP*FYPEDHQLSAS
Trigger: AGATGCTGAGAGCTGGTGATCCTCAGGATAAAACAAAGGAACCAGAACCACATCCACTGATCGGATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS GCA 72 bp TTTCTTTACCAGTTGCTGAACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACTTACTTCTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: FLYQLLNHPIIK*KKSGPTYFFLL
Trigger: CAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS GCA 72 bp GGCAGAAGAAAATCTGCATGTAAGTGGACGGATTATTaGTGGAGAGGCTTTTGGTCCATCTCTTCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: GRRKSACKWTDY*WRGFWSISSRR
Trigger: TCTTCTGGAAGAGATGGACCAAAAGCCTCTCCAGCAATAATCCGTCCACTTACATGCAGATTTTCTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437477.6
ENST00000529119.1
CDS GCA 72 bp AAACTGGTTAACCCCTTAGTAGACTGGTTAACCCCTTaGTTCTCCTGGCTAGGAGAAGGAGATTGTAACTTG +
Preference number: 6 (lower is better)
Translates to: KLVNPLVDWLTP*FSWLGEGDCNL
Trigger: CAAGTTACAATCTCCTTCTCCTAGCCAGGAGAAGCAAGGGGTTAACCAGTCTACTAAGGGGTTAACCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533296.5
CDS CAA 72 bp CATCAGAACAGCCTGGTGCCCAATTTTCTTTACCAGTaGCTGAACCATCCGATCATTAAGTGCAAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: HQNSLVPNFLYQ*LNHPIIKCKKS
Trigger: GCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000324172.10
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000524930.1
ENST00000529723.1
ENST00000531544.5
ENST00000532309.5
ENST00000532763.5
ENST00000533296.5
CDS GCA 72 bp TTTCTTTACCAGTTGCTGAACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACTTACTTCTTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: FLYQLLNHPIIK*KKSGPTYFFLE
Trigger: TTCAAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524930.1
CDS CAA 90 bp TGCTCATCATCTTCTATGGGTCTTCGAACATATTTAAAGCGATCTTaGAGGGCTCGTTTCCATAAAAAGAAGCCACAGCCATCCTCATCC +
Preference number: 6 (lower is better)
Translates to: CSSSSMGLRTYLKRS*RARFHKKKPQPSSS
Trigger: GGATGAGGATGGCTGTGGCTTCTTTTTATGGAAACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS TCA 72 bp GACTGTGCATATCGAAAATCAGCGTTTCTAGGAAGTTaGAAGTTTGGGACAGTCTTCTTGGACACTCAATCC +
Preference number: 6 (lower is better)
Translates to: DCAYRKSAFLGS*KFGTVFLDTQS
Trigger: GGATTGAGTGTCCAAGAAGACTGTCCCAAACTTTCAACTTCCTAGAAACGCTGATTTTCGATATGCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
CDS GCA 72 bp TTTCTTTACCAGTTGCTGAACCATCCGATCATTAAGTaGAAGAAGAGCGGCCCCACTTACTTCTTGAAATCT +
Preference number: 6 (lower is better)
Translates to: FLYQLLNHPIIK*KKSGPTYFLKS
Trigger: AGATTTCAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529723.1
CDS CCA 72 bp AGAAGAAAATCTGCATGTAAGTGGACGGATTATTGCTaGAGAGGCTTTTGGTCCATCTCTTCCAGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: RRKSACKWTDYC*RGFWSISSRRE
Trigger: TTCTCTTCTGGAAGAGATGGACCAAAAGCCTCTCCAGCAATAATCCGTCCACTTACATGCAGATTTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437477.6
ENST00000529119.1
CDS CAA 72 bp GGACTGTGCATATCGAAAATCAGCGTTTCTAGGAAGTaGAAAGTTTGGGACAGTCTTCTTGGACACTCAATC +
Preference number: 6 (lower is better)
Translates to: GLCISKISVSRK*KVWDSLLGHSI
Trigger: GATTGAGTGTCCAAGAAGACTGTCCCAAACTTTCAACTTCCTAGAAACGCTGATTTTCGATATGCACAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
CDS GCA 72 bp GGAATTGGCCTGCATATATACAGTCATCACCGTCTTTaGCGAATTAGAGACGACATATTTTACTCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: GIGLHIYSHHRL*RIRDDIFYSVN
Trigger: GTTCACAGAGTAAAATATGTCGTCTCTAATTCGGCAAAGACGGTGATGACTGTATATATGCAGGCCAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368134.6
CDS CAA 72 bp TCTTCTATGGGTCTTCGAACATATTTAAAGCGATCTTaGAGGGCTCGTTTCCATAAAAAGAAGCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: SSMGLRTYLKRS*RARFHKKKPQP
Trigger: TGGCTGTGGCTTCTTTTTATGGAAACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS CAA 90 bp TGTCTGGCCTCTTCGGTGTCCAAATTTACACTTATTTCTAATCACTaGCTCATCATCTTCTATGGGTCTTCGAACATATTTAAAGCGATC +
Preference number: 6 (lower is better)
Translates to: CLASSVSKFTLISNH*LIIFYGSSNIFKAI
Trigger: GATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAGCAAGTGATTAGAAATAAGTGTAAATTTGGACACCGAAGAGGCCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS CCA 72 bp TCTCTCCAGTCCTTTTCTGTTTTCACGTATTCTTGCTaGAACCACTTAATATGTTCATCTAGCTCAGAATCA +
Preference number: 6 (lower is better)
Translates to: SLQSFSVFTYSC*NHLICSSSSES
Trigger: TGATTCTGAGCTAGATGAACATATTAAGTGGTTCCAGCAAGAATACGTGAAAACAGAAAAGGACTGGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
CDS GCA 72 bp ATTTCTCTCCAGTCCTTTTCTGTTTTCACGTATTCTTaGTGGAACCACTTAATATGTTCATCTAGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: ISLQSFSVFTYS*WNHLICSSSSE
Trigger: TTCTGAGCTAGATGAACATATTAAGTGGTTCCAGCAAGAATACGTGAAAACAGAAAAGGACTGGAGAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
CDS GCA 72 bp CTGGTAAAACATAGGACTTCGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTTTCACATTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LVKHRTSSTVML*FLLEFVSHFFC
Trigger: ACAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTTTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526886.5
CDS GCA 72 bp CTGGTAAAACATAGGACTTCGTCCACTGTAATGCTTTaGTTCTTGCTAGAATTTGTTTCACATTTCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LVKHRTSSTVML*FLLEFVSHFSV
Trigger: AACAGAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTTTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528422.5
ENST00000529723.1
ENST00000532309.5
CDS CAA 72 bp TCTTCTATGGGTCTTCGAACATATTTAAAGCGATCTTaGAGGGCTCGTTTCCATAAAAACTATCATCTTTGG +
Preference number: 6 (lower is better)
Translates to: SSMGLRTYLKRS*RARFHKNYHLW
Trigger: CCAAAGATGATAGTTTTTATGGAAACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533296.5
CDS CCA 72 bp TCATCAAATCTTATATCAGCAAGAGATTTCCTTGTCTaGCCTCTTCGGTGTCCAAATTTACACTTATTTCTA +
Preference number: 6 (lower is better)
Translates to: SSNLISARDFLV*PLRCPNLHLFL
Trigger: TAGAAATAAGTGTAAATTTGGACACCGAAGAGGCCAGACAAGGAAATCTCTTGCTGATATAAGATTTGATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
CDS CAA 72 bp TCTTCGGTGTCCAAATTTACACTTATTTCTAATCACTaGCTCATCATCTTCTATGGGTCTTCGAACATATTT +
Preference number: 6 (lower is better)
Translates to: SSVSKFTLISNH*LIIFYGSSNIF
Trigger: AAATATGTTCGAAGACCCATAGAAGATGATGAGCAAGTGATTAGAAATAAGTGTAAATTTGGACACCGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368134.6
ENST00000437477.6
ENST00000439090.7
ENST00000457563.6
ENST00000526886.5
ENST00000528422.5
ENST00000532763.5
ENST00000533296.5
CDS CAA 72 bp AAACATAGGACTTCGTCCACTGTAATGCTTTGCTTCTaGCTAGAATTTGTTTCACATTTCTCTGTTTCAATA +
Preference number: 6 (lower is better)
Translates to: KHRTSSTVMLCF*LEFVSHFSVSI
Trigger: TATTGAAACAGAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528422.5
ENST00000529723.1
ENST00000532309.5