Pregenerated sensors for SAMD11 (Homo sapiens)
Ensembl gene IDs: ENSG00000187634Ensembl transcript IDs: ENST00000341065.8, ENST00000342066.8, ENST00000437963.5, ENST00000455979.1, ENST00000464948.1, ENST00000466827.1, ENST00000474461.1, ENST00000616016.5, ENST00000616125.5, ENST00000617307.5, ENST00000618181.5, ENST00000618323.5, ENST00000618779.5, ENST00000622503.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCTCTCCGCCGGCGGCAGCAACTTATTCCGGCCCGGGCTGGAGTTaGGTCGCGGGGGCCGGGGAGGCGCCTGGCCGCGCGCCCACGCCG | + |
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Preference number: 5 (lower is better) Translates to: RSPPAAATYSGPGWS*VAGAGEAPGRAPTP Trigger: CGGCGTGGGCGCGCGGCCAGGCGCCTCCCCGGCCCCCGCGACCCAACTCCAGCCCGGGCCGGAATAAGTTGCTGCCGCCGGCGGAGAGCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 90 bp | GTCTCGGGCGCCAGCAGCTGTGGGCGCGCGCTCTCCAGCTCCTTCTaGCGCAGGAGGTCGGCGGGCAGCTCCAGCCTGGGCCGGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VSGASSCGRALSSSF*RRRSAGSSSLGRGQ Trigger: CTGCCCCCGGCCCAGGCTGGAGCTGCCCGCCGACCTCCTGCGGCAGAAGGAGCTGGAGAGCGCGCGCCCACAGCTGCTGGCGCCCGAGAC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466827.1 |
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| CDS CCA 90 bp | CGCCGTTGTCCAGCAGCGGCTGGAAATCCGGGGCCGCGGCCGCGGTaGCCGAGAAGCGCTCGAGGGCCAGCGGGTCCCTGGGCAGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RRCPAAAGNPGPRPR*PRSARGPAGPWAGG Trigger: TCCACCTGCCCAGGGACCCGCTGGCCCTCGAGCGCTTCTCGGCCACCGCGGCCGCGGCCCCGGATTTCCAGCCGCTGCTGGACAACGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 90 bp | GTCTCGGGCGCCAGCAGCTGTGGGCGCGCGCTCTCCAGCTCCTTCTaGCGCAGGAGGTCGGCGGGCAGCTCCAGCCGGGCCAGGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VSGASSCGRALSSSF*RRRSAGSSSRARFC Trigger: GCAGAACCTGGCCCGGCTGGAGCTGCCCGCCGACCTCCTGCGGCAGAAGGAGCTGGAGAGCGCGCGCCCACAGCTGCTGGCGCCCGAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000464948.1 ENST00000474461.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 90 bp | TCGCGGCCCGGGAACTCCTTCTTGACCGCCGGCATGGCGCCCCGGTaGCTCCGCAGCCCCGCTCTCCGCCGGCGGCAGCAACTTATTCCG | + |
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Preference number: 5 (lower is better) Translates to: SRPGNSFLTAGMAPR*LRSPALRRRQQLIP Trigger: CGGAATAAGTTGCTGCCGCCGGCGGAGAGCGGGGCTGCGGAGCCACCGGGGCGCCATGCCGGCGGTCAAGAAGGAGTTCCCGGGCCGCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 90 bp | CTGCCCAGCCGGCCGGCGGGGCCTCAGAGGCCGGAGACATGGAGCTaGTATCGATCCCGGATCGACTCGCCGAGCGCCGCAGTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPSRPAGPQRPETWS*YRSRIDSPSAAVPG Trigger: CCCTGGAACTGCGGCGCTCGGCGAGTCGATCCGGGATCGATAGCAGCTCCATGTCTCCGGCCTCTGAGGCCCCGCCGGCCGGCTGGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 90 bp | CGCCGCGGTGGCGGATGGACGGGCCCTTGCTGCCCTGGCAGAGTTTaGGCACGTAGAGCAGCGCGCGGTTGGCGCCGCACTCCACCTCGA | + |
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Preference number: 5 (lower is better) Translates to: RRGGGWTGPCCPGRV*ARRAARGWRRTPPR Trigger: TCGAGGTGGAGTGCGGCGCCAACCGCGCGCTGCTCTACGTGCGCAAACTCTGCCAGGGCAGCAAGGGCCCGTCCATCCGCCACCGCGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 90 bp | TGCGCACGTAGAGCAGCGCGCGGTTGGCGCCGCACTCCACCTCGATaGACGGCTCGCCGTTGTCCAGCAGCGGCTGGAAATCCGGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: CARRAARGWRRTPPR*TARRCPAAAGNPGP Trigger: CGGCCCCGGATTTCCAGCCGCTGCTGGACAACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAACCGCGCGCTGCTCTACGTGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 90 bp | GCCGCCGCCCACAGGTGGGGCCACTCCCGTCGCTGTCACCATCGCTaGCAGAGAAGCTGGGAGTTCGCTCCTTCTTCAGGTTCCGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: AAAHRWGHSRRCHHR*QRSWEFAPSSGSGR Trigger: CCGCCCGGAACCTGAAGAAGGAGCGAACTCCCAGCTTCTCTGCCAGCGATGGTGACAGCGACGGGAGTGGCCCCACCTGTGGGCGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 90 bp | CCGCTGACGAACTGGAACTCGTTGGGCGTGAGCCACTCGCCGCGGTaGCGGATGGACGGGCCCTTGCTGCCCTGGCAGAGTTTGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: PLTNWNSLGVSHSPR*RMDGPLLPWQSLRT Trigger: CGTGCGCAAACTCTGCCAGGGCAGCAAGGGCCCGTCCATCCGCCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTTCGTCAGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 90 bp | TGTGCGGACCATCCTCCTGCTTCAAGCCTGGCCGCCGCCCACAGGTaGGGCCACTCCCGTCGCTGTCACCATCGCTGGCAGAGAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: CADHPPASSLAAAHR*GHSRRCHHRWQRSW Trigger: CCAGCTTCTCTGCCAGCGATGGTGACAGCGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 90 bp | CCTTGCTGCCCTGGCAGAGTTTGCGCACGTAGAGCAGCGCGCGGTTaGCGCCGCACTCCACCTCGATGCACGGCTCGCCGTTGTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PCCPGRVCARRAARG*RRTPPRCTARRCPA Trigger: TGCTGGACAACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAACCGCGCGCTGCTCTACGTGCGCAAACTCTGCCAGGGCAGCAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 90 bp | ATGCTGCGCTTCCAGTCCTTGGCCGTCTCGCGGCCGCTGACGAACTaGAACTCGTTGGGCGTGAGCCACTCGCCGCGGTGGCGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: MLRFQSLAVSRPLTN*NSLGVSHSPRWRMD Trigger: GTCCATCCGCCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAAGGACTGGAAGCGCAGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS TCA 90 bp | GTAGAGGCGCTGAGGGTCCTCAAAGGTGCTGGCCTCGCTCAGTGCTaGCACAAGCCGGCGGTAATGGTCCTCCGGGGCCATGCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VEALRVLKGAGLAQC*HKPAVMVLRGHAGP Trigger: GGGCCCAGCATGGCCCCGGAGGACCATTACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAGCGCCTCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS CCA 90 bp | AGGTGGGGCCACTCCCGTCGCTGTCACCATCGCTGGCAGAGAAGCTaGGAGTTCGCTCCTTCTTCAGGTTCCGGGCGGCAGGCAGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RWGHSRRCHHRWQRS*EFAPSSGSGRQAGR Trigger: TCGCCCTGCCTGCCGCCCGGAACCTGAAGAAGGAGCGAACTCCCAGCTTCTCTGCCAGCGATGGTGACAGCGACGGGAGTGGCCCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 90 bp | TGGTGGGGGCTGTCGCACACCCACCCAGAGCTTTCTGCCCAGCTGTaGTCTGGAGACCCTGACCTCACTCCCCAGCGTCTCACCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: WWGLSHTHPELSAQL*SGDPDLTPQRLTWA Trigger: GGCCCAGGTGAGACGCTGGGGAGTGAGGTCAGGGTCTCCAGACCACAGCTGGGCAGAAAGCTCTGGGTGGGTGTGCGACAGCCCCCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455979.1 |
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| CDS GCA 90 bp | GGCTGGGGAGGCCCAGGTGGTAGAGGCGCTGAGGGTCCTCAAAGGTaGTGGCCTCGCTCAGTGCTGACACAAGCCGGCGGTAATGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GWGGPGGRGAEGPQR*WPRSVLTQAGGNGP Trigger: AGGACCATTACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAGCGCCTCTACCACCTGGGCCTCCCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS GCA 90 bp | CCGTCCTGGCTTCTCTTCATGATACGGATGTGCGGACCATCCTCCTaGTTCAAGCCTGGCCGCCGCCCACAGGTGGGGCCACTCCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: PSWLLFMIRMCGPSS*FKPGRRPQVGPLPS Trigger: CGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGAAGCCAGGACGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618181.5 |
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| CDS CCA 90 bp | TGGGGAGGCCCAGGTGGTAGAGGCGCTGAGGGTCCTCAAAGGTGCTaGCCTCGCTCAGTGCTGACACAAGCCGGCGGTAATGGTCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: WGGPGGRGAEGPQRC*PRSVLTQAGGNGPP Trigger: CGGAGGACCATTACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAGCGCCTCTACCACCTGGGCCTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS TCA 90 bp | CGCAGGCCAATCTCCAGGCTGCCTCTCTGGAATTCACAGCGGCTCTaGTGCTCGGGCATAACGAGGTGGCGGCTGCGGTGGACGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: RRPISRLPLWNSQRL*CSGITRWRLRWTLD Trigger: ATCCAGCGTCCACCGCAGCCGCCACCTCGTTATGCCCGAGCATCAGAGCCGCTGTGAATTCCAGAGAGGCAGCCTGGAGATTGGCCTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS GCA 90 bp | GTGTGGACTCTTCTCTTCATGATACGGATGTGCGGACCATCCTCCTaGTTCAAGCCTGGCCGCCGCCCACAGGTGGGGCCACTCCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: VWTLLFMIRMCGPSS*FKPGRRPQVGPLPS Trigger: CGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGAAGAGTCCACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 90 bp | TCTCTTCATGATACGGATGTGCGGACCATCCTCCTGCTTCAAGCCTaGCCGCCGCCCACAGGTGGGGCCACTCCCGTCGCTGTCACCATC | + |
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Preference number: 5 (lower is better) Translates to: SLHDTDVRTILLLQA*PPPTGGATPVAVTI Trigger: GATGGTGACAGCGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS GCA 90 bp | GAGGATATTCGGCAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTaGAGGATCCCCTTGGACATAAGCGTCTTCAGACTTTTCCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: EDIRQPGQSQIGGCT*RIPLDISVFRLFPR Trigger: CCGAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTGCCGAATATCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342066.8 |
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| CDS GCA 90 bp | GAGGATATTCGGCAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTaGAGGATCCCCTTGGACATAAGCGTCTTCAGACTTTTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: EDIRQPGQSQIGGCT*RIPLDISVFRLFPS Trigger: GGAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTGCCGAATATCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437963.5 |
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| CDS GCA 90 bp | GAGGATATTCGGCAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTaGAGGATCCCCTTGGACATAAGCGTCTTCAGACTTTTCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: EDIRQPGQSQIGGCT*RIPLDISVFRLFPL Trigger: CAAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTGCCGAATATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 72 bp | CCTTCTGCCGCAGGAGGTCGGCGGGCAGCTCCAGCCTaGGCCGGGGGCAGACGCGGGTCAGCCGCCTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PSAAGGRRAAPA*AGGRRGSAASR Trigger: CCGGGAGGCGGCTGACCCGCGTCTGCCCCCGGCCCAGGCTGGAGCTGCCCGCCGACCTCCTGCGGCAGAAGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466827.1 |
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| CDS CCA 72 bp | CCAGCAGCGGCTGGAAATCCGGGGCCGCGGCCGCGGTaGCCGAGAAGCGCTCGAGGGCCAGCGGGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PAAAGNPGPRPR*PRSARGPAGPW Trigger: CCAGGGACCCGCTGGCCCTCGAGCGCTTCTCGGCCACCGCGGCCGCGGCCCCGGATTTCCAGCCGCTGCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 90 bp | AGCGCGCGGTTGGCGCCGCACTCCACCTCGATGCACGGCTCGCCGTaGTCCAGCAGCGGCTGGAAATCCGGGGCCGCGGCCGCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SARLAPHSTSMHGSP*SSSGWKSGAAAAVA Trigger: GGCCACCGCGGCCGCGGCCCCGGATTTCCAGCCGCTGCTGGACAACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAACCGCGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS TCA 72 bp | CCAGGGCCAGGTCCTCGCGGCCCGGGAACTCCTTCTTaGCCGCCGGCATGGCGCCCCGGTGGCTCCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGPGPRGPGTPS*PPAWRPGGSAA Trigger: GGCTGCGGAGCCACCGGGGCGCCATGCCGGCGGTCAAGAAGGAGTTCCCGGGCCGCGAGGACCTGGCCCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | GCCAGCAGCTGTGGGCGCGCGCTCTCCAGCTCCTTCTaGCGCAGGAGGTCGGCGGGCAGCTCCAGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ASSCGRALSSSF*RRRSAGSSSRA Trigger: GGCCCGGCTGGAGCTGCCCGCCGACCTCCTGCGGCAGAAGGAGCTGGAGAGCGCGCGCCCACAGCTGCTGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000464948.1 ENST00000474461.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 72 bp | TCTCCGCCGGCGGCAGCAACTTATTCCGGCCCGGGCTaGAGTTGGGTCGCGGGGGCCGGGGAGGCGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPPAAATYSGPG*SWVAGAGEAPG Trigger: GCCAGGCGCCTCCCCGGCCCCCGCGACCCAACTCCAGCCCGGGCCGGAATAAGTTGCTGCCGCCGGCGGAGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 72 bp | GCCAGGGCCAGGTCCTCGCGGCCCGGGAACTCCTTCTaGACCGCCGGCATGGCGCCCCGGTGGCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARARSSRPGNSF*TAGMAPRWLRS Trigger: GCTGCGGAGCCACCGGGGCGCCATGCCGGCGGTCAAGAAGGAGTTCCCGGGCCGCGAGGACCTGGCCCTGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | GCCAGCAGCTGTGGGCGCGCGCTCTCCAGCTCCTTCTaGCGCAGGAGGTCGGCGGGCAGCTCCAGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASSCGRALSSSF*RRRSAGSSSLG Trigger: GCCCAGGCTGGAGCTGCCCGCCGACCTCCTGCGGCAGAAGGAGCTGGAGAGCGCGCGCCCACAGCTGCTGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466827.1 |
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| CDS GCA 72 bp | CGGCCGGCGGGGCCTCAGAGGCCGGAGACATGGAGCTaGTATCGATCCCGGATCGACTCGCCGAGCGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RPAGPQRPETWS*YRSRIDSPSAA Trigger: TGCGGCGCTCGGCGAGTCGATCCGGGATCGATAGCAGCTCCATGTCTCCGGCCTCTGAGGCCCCGCCGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | GCCACTCGCCGCGGTGGCGGATGGACGGGCCCTTGCTaGCCTGGCAGAGTTTGCGCACGTAGAGCAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: ATRRGGGWTGPC*PGRVCARRAAR Trigger: GCGCGCTGCTCTACGTGCGCAAACTCTGCCAGGGCAGCAAGGGCCCGTCCATCCGCCACCGCGGCGAGTGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 72 bp | TTGGCGCCGCACTCCACCTCGATGCACGGCTCGCCGTaGTCCAGCAGCGGCTGGAAATCCGGGGCCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAPHSTSMHGSP*SSSGWKSGAAA Trigger: GGCCGCGGCCCCGGATTTCCAGCCGCTGCTGGACAACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | GGCGGATGGACGGGCCCTTGCTGCCCTGGCAGAGTTTaGGCACGTAGAGCAGCGCGCGGTTGGCGCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: GGWTGPCCPGRV*ARRAARGWRRT Trigger: AGTGCGGCGCCAACCGCGCGCTGCTCTACGTGCGCAAACTCTGCCAGGGCAGCAAGGGCCCGTCCATCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 90 bp | TTCCAGTCCTTGGCCGTCTCGCGGCCGCTGACGAACTGGAACTCGTaGGGCGTGAGCCACTCGCCGCGGTGGCGGATGGACGGGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FQSLAVSRPLTNWNS*GVSHSPRWRMDGPL Trigger: CAAGGGCCCGTCCATCCGCCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAAGGACTGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | AGCTTGGCCCGGAGTGGGCCCCCTGCACCCAACAGCTaGCGTCTCGGGGTCCTCTCCGTCCGAGTCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLARSGPPAPNS*RLGVLSVRVFG Trigger: CCCAAAGACTCGGACGGAGAGGACCCCGAGACGGCAGCTGTTGGGTGCAGGGGGCCCACTCCGGGCCAAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000474461.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 72 bp | CATCCTCCTGCTTCAAGCCTGGCCGCCGCCCACAGGTaGGGCCACTCCCGTCGCTGTCACCATCGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HPPASSLAAAHR*GHSRRCHHRWQ Trigger: CTGCCAGCGATGGTGACAGCGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 72 bp | AAACTCGGCCCAGGCGCCTGGCCACCTGCAGAGAGATaGCCTGGTGGGGGCTGTCGCACACCCACCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLGPGAWPPAER*PGGGCRTPTQS Trigger: GCTCTGGGTGGGTGTGCGACAGCCCCCACCAGGCCATCTCTCTGCAGGTGGCCAGGCGCCTGGGCCGAGTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455979.1 |
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| CDS CCA 72 bp | CCTGGCAGAGTTTGCGCACGTAGAGCAGCGCGCGGTTaGCGCCGCACTCCACCTCGATGCACGGCTCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGRVCARRAARG*RRTPPRCTARR Trigger: ACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAACCGCGCGCTGCTCTACGTGCGCAAACTCTGCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 72 bp | TTCAGGTTCCGGGCGGCAGGCAGGGCGACTGTCCTCTaGTCTGCCAGCCGCCCCCGGTTCACCGGGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: FRFRAAGRATVL*SASRPRFTGED Trigger: ATCCTCCCCGGTGAACCGGGGGCGGCTGGCAGACAAGAGGACAGTCGCCCTGCCTGCCGCCCGGAACCTGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CAA 72 bp | TTGGCCGTCTCGCGGCCGCTGACGAACTGGAACTCGTaGGGCGTGAGCCACTCGCCGCGGTGGCGGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: LAVSRPLTNWNS*GVSHSPRWRMD Trigger: GTCCATCCGCCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | AGAGCAGCGCGCGGTTGGCGCCGCACTCCACCTCGATaGACGGCTCGCCGTTGTCCAGCAGCGGCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: RAARGWRRTPPR*TARRCPAAAGN Trigger: ATTTCCAGCCGCTGCTGGACAACGGCGAGCCGTGCATCGAGGTGGAGTGCGGCGCCAACCGCGCGCTGCTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 72 bp | GATACGGATGTGCGGACCATCCTCCTGCTTCAAGCCTaGCCGCCGCCCACAGGTGGGGCCACTCCCGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: DTDVRTILLLQA*PPPTGGATPVA Trigger: AGCGACGGGAGTGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 72 bp | AACTGGAACTCGTTGGGCGTGAGCCACTCGCCGCGGTaGCGGATGGACGGGCCCTTGCTGCCCTGGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: NWNSLGVSHSPR*RMDGPLLPWQS Trigger: ACTCTGCCAGGGCAGCAAGGGCCCGTCCATCCGCCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CCA 72 bp | TTCCAGTCCTTGGCCGTCTCGCGGCCGCTGACGAACTaGAACTCGTTGGGCGTGAGCCACTCGCCGCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: FQSLAVSRPLTN*NSLGVSHSPRW Trigger: CCACCGCGGCGAGTGGCTCACGCCCAACGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAAGGACTGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | GGCCCAGGTGGTAGAGGCGCTGAGGGTCCTCAAAGGTaGTGGCCTCGCTCAGTGCTGACACAAGCCGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GPGGRGAEGPQR*WPRSVLTQAGG Trigger: ACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAGCGCCTCTACCACCTGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS CCA 72 bp | CAGCTGCCGTCTCGGGGTCCTCTCCGTCCGAGTCTTTaGGGGGCTCGTCTTCCGAGCCATCTTGTGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QLPSRGPLRPSL*GARLPSHLVPR Trigger: TCTGGGCACAAGATGGCTCGGAAGACGAGCCCCCCAAAGACTCGGACGGAGAGGACCCCGAGACGGCAGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000474461.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS TCA 72 bp | CTGAGGGTCCTCAAAGGTGCTGGCCTCGCTCAGTGCTaGCACAAGCCGGCGGTAATGGTCCTCCGGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LRVLKGAGLAQC*HKPAVMVLRGH Trigger: ATGGCCCCGGAGGACCATTACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS GCA 72 bp | ACAGGTCACCGGCGGGTCGCAGGCCAATCTCCAGGCTaGCTCTCTGGAATTCACAGCGGCTCTGATGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TGHRRVAGQSPG*LSGIHSGSDAR Trigger: CCGAGCATCAGAGCCGCTGTGAATTCCAGAGAGGCAGCCTGGAGATTGGCCTGCGACCCGCCGGTGACCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS GCA 72 bp | CTTCTCTTCATGATACGGATGTGCGGACCATCCTCCTaGTTCAAGCCTGGCCGCCGCCCACAGGTGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LLFMIRMCGPSS*FKPGRRPQVGP Trigger: TGGCCCCACCTGTGGGCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CCA 72 bp | CCAGGTGGTAGAGGCGCTGAGGGTCCTCAAAGGTGCTaGCCTCGCTCAGTGCTGACACAAGCCGGCGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: PGGRGAEGPQRC*PRSVLTQAGGN Trigger: ATTACCGCCGGCTTGTGTCAGCACTGAGCGAGGCCAGCACCTTTGAGGACCCTCAGCGCCTCTACCACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000455979.1 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000622503.5 |
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| CDS CCA 72 bp | CACAGGTGGGGCCACTCCCGTCGCTGTCACCATCGCTaGCAGAGAAGCTGGGAGTTCGCTCCTTCTTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HRWGHSRRCHHR*QRSWEFAPSSG Trigger: ACCTGAAGAAGGAGCGAACTCCCAGCTTCTCTGCCAGCGATGGTGACAGCGACGGGAGTGGCCCCACCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618181.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CAA 72 bp | CTTTTCCCTTTGTGGCGGATGCTGCGCTTCCAGTCCTaGGCCGTCTCGCGGCCGCTGACGAACTGGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: LFPLWRMLRFQS*AVSRPLTNWNS Trigger: CGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAAGGACTGGAAGCGCAGCATCCGCCACAAAGGGAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 90 bp | CAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTCGGCCCGACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: QPGQSQIGGCTCRIP*DISVFRLFPRPDFP Trigger: TGGGAAGTCGGGCCGAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342066.8 |
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| CDS CAA 90 bp | CAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTTCCGAGCGGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QPGQSQIGGCTCRIP*DISVFRLFPSERRE Trigger: CTCCCTCCGCTCGGAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437963.5 |
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| CDS CAA 90 bp | GTCTTCAGACTTTTCCCTTTGTGGCGGATGCTGCGCTTCCAGTCCTaGGCCGTCTCGCGGCCGCTGACGAACTGGAACTCGTTGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VFRLFPLWRMLRFQS*AVSRPLTNWNSLGV Trigger: CACGCCCAACGAGTTCCAGTTCGTCAGCGGCCGCGAGACGGCCAAGGACTGGAAGCGCAGCATCCGCCACAAAGGGAAAAGTCTGAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | CGGCAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTaGAGGATCCCCTTGGACATAAGCGTCTTCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RQPGQSQIGGCT*RIPLDISVFRL Trigger: AAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | AGGTTGCCGTCCTGGCTTCTCTTCATGATACGGATGTaGGGACCATCCTCCTGCTTCAAGCCTGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RLPSWLLFMIRM*GPSSCFKPGRR Trigger: GCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGAAGCCAGGACGGCAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618181.5 |
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| CDS GCA 72 bp | GATATTCGGCAGCCCGGGCAGTCGCAGATCGGAGGATaGACCTGCAGGATCCCCTTGGACATAAGCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DIRQPGQSQIGG*TCRIPLDISVF Trigger: GAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTGCCGAATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000618323.5 |
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| CDS GCA 72 bp | CAGTGGGTGTGGACTCTTCTCTTCATGATACGGATGTaGGGACCATCCTCCTGCTTCAAGCCTGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: QWVWTLLFMIRM*GPSSCFKPGRR Trigger: GCGGCGGCCAGGCTTGAAGCAGGAGGATGGTCCGCACATCCGTATCATGAAGAGAAGAGTCCACACCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CAA 72 bp | CGGCTGCGGTGGACGCTGGATATGAGGGTGGGAAGGTaGCCGTCCTGGCTTCTCTTCATGATACGGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: RLRWTLDMRVGR*PSWLLFMIRMC Trigger: GCACATCCGTATCATGAAGAGAAGCCAGGACGGCAACCTTCCCACCCTCATATCCAGCGTCCACCGCAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618181.5 |
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| CDS CAA 90 bp | CAGCCCGGGCAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTTTGTGGCGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: QPGQSQIGGCTCRIP*DISVFRLFPLWRML Trigger: CAGCATCCGCCACAAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGCCCGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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| CDS CAA 72 bp | CAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: QSQIGGCTCRIP*DISVFRLFPRP Trigger: GGGCCGAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342066.8 |
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| CDS CAA 72 bp | CAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: QSQIGGCTCRIP*DISVFRLFPSE Trigger: CTCGGAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437963.5 |
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| CDS CCA 72 bp | CAGGACGCCTCTCGGAAAGAGATGTTCACGTCCCAGTaGGTGTGGACTCTTCTCTTCATGATACGGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: QDASRKEMFTSQ*VWTLLFMIRMC Trigger: GCACATCCGTATCATGAAGAGAAGAGTCCACACCCACTGGGACGTGAACATCTCTTTCCGAGAGGCGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000341065.8 ENST00000342066.8 ENST00000437963.5 ENST00000616016.5 ENST00000616125.5 ENST00000617307.5 ENST00000618323.5 ENST00000618779.5 ENST00000622503.5 |
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| CDS CAA 72 bp | CAGTCGCAGATCGGAGGATGCACCTGCAGGATCCCCTaGGACATAAGCGTCTTCAGACTTTTCCCTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSQIGGCTCRIP*DISVFRLFPLW Trigger: CCACAAAGGGAAAAGTCTGAAGACGCTTATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000616016.5 ENST00000618323.5 |
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