Pregenerated sensors for SALRNA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000281264Ensembl transcript IDs: ENST00000630100.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCAGACAACAGGAAGATGGAGAAGAGATGTTCCTTCCCCATGCTTaGTGTTCCTGTCACCGTTATCCCAGCAGTGGAGTTGGTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TRQQEDGEEMFLPHA*CSCHRYPSSGVGSS Trigger: ACTGGAACCAACTCCACTGCTGGGATAACGGTGACAGGAACAGCAAGCATGGGGAAGGAACATCTCTTCTCCATCTTCCTGTTGTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS TCA 90 bp | TGTCTCCAGCTCCTAATAACTCTTCTGTGCTCAGCTCTGCAATGGTaGGGCTGTGACTTTGCAACCCAATTTCCTTGTTGCCAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CLQLLITLLCSALQW*GCDFATQFPCCQLL Trigger: CAGCAGCTGGCAACAAGGAAATTGGGTTGCAAAGTCACAGCCTCACCATTGCAGAGCTGAGCACAGAAGAGTTATTAGGAGCTGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS CCA 90 bp | GTTGTCATCCAACCCTCCAGATTAGAATGTTCCCTCCCTGGGCTGTaGTTAGATGGAGAGAGTAGGGAGGCATGGTGTTATAAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: VVIQPSRLECSLPGL*LDGESREAWCYKAT Trigger: AGTAGCTTTATAACACCATGCCTCCCTACTCTCTCCATCTAACCACAGCCCAGGGAGGGAACATTCTAATCTGGAGGGTTGGATGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 90 bp | CCCTTTCCCTCTGTTCCTCTAGTCCTAGGAGTGGTGGCTGTTTCCTaGAGTTACTACGTTTGCATGATAACAGGTGTTCCTTTTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PFPSVPLVLGVVAVS*SYYVCMITGVPFLP Trigger: AGGAAGAAAAGGAACACCTGTTATCATGCAAACGTAGTAACTGCAGGAAACAGCCACCACTCCTAGGACTAGAGGAACAGAGGGAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 90 bp | TTTGCTCAGCACTTCTCTCTCCTGCTGCCATGTGAAGGATATGTTTaGTTCCCCTTCTGCTGTAATTGTAAGTTTCCTGAGGCCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: FAQHFSLLLPCEGYV*FPFCCNCKFPEAFP Trigger: TGGGAAGGCCTCAGGAAACTTACAATTACAGCAGAAGGGGAAGCAAACATATCCTTCACATGGCAGCAGGAGAGAGAAGTGCTGAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 90 bp | CCTCTAGTCCTAGGAGTGGTGGCTGTTTCCTGCAGTTACTACGTTTaGATGATAACAGGTGTTCCTTTTCTTCCTTTCAGTCCTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PLVLGVVAVSCSYYV*MITGVPFLPFSPLL Trigger: TAGCAAAGGACTGAAAGGAAGAAAAGGAACACCTGTTATCATGCAAACGTAGTAACTGCAGGAAACAGCCACCACTCCTAGGACTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS CAA 90 bp | GACCAGACAACAGGAAGATGGAGAAGAGATGTTCCTTCCCCATGCTaGCTGTTCCTGTCACCGTTATCCCAGCAGTGGAGTTGGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DQTTGRWRRDVPSPC*LFLSPLSQQWSWFQ Trigger: CTGGAACCAACTCCACTGCTGGGATAACGGTGACAGGAACAGCAAGCATGGGGAAGGAACATCTCTTCTCCATCTTCCTGTTGTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS CCA 72 bp | CAACCCTCCAGATTAGAATGTTCCCTCCCTGGGCTGTaGTTAGATGGAGAGAGTAGGGAGGCATGGTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: QPSRLECSLPGL*LDGESREAWCY Trigger: ATAACACCATGCCTCCCTACTCTCTCCATCTAACCACAGCCCAGGGAGGGAACATTCTAATCTGGAGGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS CAA 72 bp | ATCCCAGCAGTGGAGTTGGTTCCAGTTTCCTTCGTTTaGCTAAGTTCCCACGATCAGCCCATCTCACCCCAT | + |
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Preference number: 6 (lower is better) Translates to: IPAVELVPVSFV*LSSHDQPISPH Trigger: ATGGGGTGAGATGGGCTGATCGTGGGAACTTAGCAAAACGAAGGAAACTGGAACCAACTCCACTGCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS TCA 72 bp | CTCCTAATAACTCTTCTGTGCTCAGCTCTGCAATGGTaGGGCTGTGACTTTGCAACCCAATTTCCTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LLITLLCSALQW*GCDFATQFPCC Trigger: GCAACAAGGAAATTGGGTTGCAAAGTCACAGCCTCACCATTGCAGAGCTGAGCACAGAAGAGTTATTAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 72 bp | TCTGTTCCTCTAGTCCTAGGAGTGGTGGCTGTTTCCTaGAGTTACTACGTTTGCATGATAACAGGTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVPLVLGVVAVS*SYYVCMITGVP Trigger: AGGAACACCTGTTATCATGCAAACGTAGTAACTGCAGGAAACAGCCACCACTCCTAGGACTAGAGGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS CAA 90 bp | TCCTCTAGTCCTAGGAGTGGTGGCTGTTTCCTGCAGTTACTACGTTaGCATGATAACAGGTGTTCCTTTTCTTCCTTTCAGTCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSPRSGGCFLQLLR*HDNRCSFSSFQSFA Trigger: AGCAAAGGACTGAAAGGAAGAAAAGGAACACCTGTTATCATGCAAACGTAGTAACTGCAGGAAACAGCCACCACTCCTAGGACTAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 72 bp | CACTTCTCTCTCCTGCTGCCATGTGAAGGATATGTTTaGTTCCCCTTCTGCTGTAATTGTAAGTTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HFSLLLPCEGYV*FPFCCNCKFPE Trigger: CTCAGGAAACTTACAATTACAGCAGAAGGGGAAGCAAACATATCCTTCACATGGCAGCAGGAGAGAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 72 bp | CTAGGAGTGGTGGCTGTTTCCTGCAGTTACTACGTTTaGATGATAACAGGTGTTCCTTTTCTTCCTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LGVVAVSCSYYV*MITGVPFLPFS Trigger: ACTGAAAGGAAGAAAAGGAACACCTGTTATCATGCAAACGTAGTAACTGCAGGAAACAGCCACCACTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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| CDS GCA 72 bp | GCTGTAATTGTAAGTTTCCTGAGGCCTTCCCAGTTATaGAGAACTGTGAGTCAATTAAACCTCTTTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: AVIVSFLRPSQL*RTVSQLNLFPL Trigger: TAGAGGAAAGAGGTTTAATTGACTCACAGTTCTGCATAACTGGGAAGGCCTCAGGAAACTTACAATTACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630100.1 |
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