Pregenerated sensors for SALRNA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000280515Ensembl transcript IDs: ENST00000629082.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGGGCTGGTGGGTCCTTAGAGCACTCTGTTCCTTCAGCCAGGTATaGATCTGCCCAGAGGTGCAATCAGCTCAGGTCCTGTTTCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: QGWWVLRALCSFSQV*ICPEVQSAQVLFLS Trigger: GCTAAGAAACAGGACCTGAGCTGATTGCACCTCTGGGCAGATTCATACCTGGCTGAAGGAACAGAGTGCTCTAAGGACCCACCAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 90 bp | CTGGCCTCTGGTCAAGCCTCCCCAATGGTCCTATTGTACACTAATTaGTCCCAGACCTGTAACCTCCCACCCAGTCCTCTCTCTTCATGC | + |
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Preference number: 5 (lower is better) Translates to: LASGQASPMVLLYTN*SQTCNLPPSPLSSC Trigger: GCATGAAGAGAGAGGACTGGGTGGGAGGTTACAGGTCTGGGAGCAATTAGTGTACAATAGGACCATTGGGGAGGCTTGACCAGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 90 bp | GCAAGGGGACCAGAAGAGGAAGGATTGCAGGTTCTGAGAGAAGGTTaGTTAAAGGGGGAAGGACTCATGGGCTCACGTGAGAGACACAGC | + |
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Preference number: 5 (lower is better) Translates to: ARGPEEEGLQVLREG*LKGEGLMGSRERHS Trigger: GCTGTGTCTCTCACGTGAGCCCATGAGTCCTTCCCCCTTTAAGCAACCTTCTCTCAGAACCTGCAATCCTTCCTCTTCTGGTCCCCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 90 bp | GAAGGACTCATGGGCTCACGTGAGAGACACAGCCGATGTACTGGTTaGAGACTTAGGCTTACCAAAGCCAATCCCCAAATCCAAAACCAC | + |
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Preference number: 5 (lower is better) Translates to: EGLMGSRERHSRCTG*RLRLTKANPQIQNH Trigger: GTGGTTTTGGATTTGGGGATTGGCTTTGGTAAGCCTAAGTCTGCAACCAGTACATCGGCTGTGTCTCTCACGTGAGCCCATGAGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 90 bp | TTAGAGCACTCTGTTCCTTCAGCCAGGTATGAATCTGCCCAGAGGTaGAATCAGCTCAGGTCCTGTTTCTTAGCCCTGTGGGAATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LEHSVPSARYESAQR*NQLRSCFLALWEFR Trigger: TCTGAATTCCCACAGGGCTAAGAAACAGGACCTGAGCTGATTGCACCTCTGGGCAGATTCATACCTGGCTGAAGGAACAGAGTGCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 90 bp | GAGCTGACTCTGTTTAGTGAAGGTGCCCATCATCCAAGGGGTCTGTaGCTTCTGTTGTCCATGGGCTGGCATGACAGTTGGTTTGATAAA | + |
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Preference number: 5 (lower is better) Translates to: ELTLFSEGAHHPRGL*LLLSMGWHDSWFDK Trigger: TTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACCTTCACTAAACAGAGTCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 90 bp | GGTGCCCATCATCCAAGGGGTCTGTGCCTTCTGTTGTCCATGGGCTaGCATGACAGTTGGTTTGATAAATGGATACGAAGAAGAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: GAHHPRGLCLLLSMG*HDSWFDKWIRRRRC Trigger: ACATCTTCTTCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 90 bp | GTGAAGGTGCCCATCATCCAAGGGGTCTGTGCCTTCTGTTGTCCATaGGCTGGCATGACAGTTGGTTTGATAAATGGATACGAAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VKVPIIQGVCAFCCP*AGMTVGLINGYEEE Trigger: TTCTTCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 90 bp | CGTAAACAGAGTGCAGTAATGGGGCCCCTGCTTAATACTTGTATTTaGAAATCTGAGCTGACTCTGTTTAGTGAAGGTGCCCATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: RKQSAVMGPLLNTCI*KSELTLFSEGAHHP Trigger: TGGATGATGGGCACCTTCACTAAACAGAGTCAGCTCAGATTTCCAAATACAAGTATTAAGCAGGGGCCCCATTACTGCACTCTGTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 90 bp | TGCCTTCTGTTGTCCATGGGCTGGCATGACAGTTGGTTTGATAAATaGATACGAAGAAGAAGATGTCACTATTGTGATGACCACCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: CLLLSMGWHDSWFDK*IRRRRCHYCDDHLL Trigger: CAACAGGTGGTCATCACAATAGTGACATCTTCTTCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 90 bp | ATCCCAAATTTGCTGTTCTTTCCAGATTTGTGTCACCTGCACAGTTaGCAAACATGTTCTCATTATCTTCATCCCAATAGCCCAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: IPNLLFFPDLCHLHS*QTCSHYLHPNSPRS Trigger: GCTCCTTGGGCTATTGGGATGAAGATAATGAGAACATGTTTGTCAACTGTGCAGGTGACACAAATCTGGAAAGAACAGCAAATTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 90 bp | TTAGACAGTGCAGTAAATGTTATCAGAATTTCCAGTTTCCAAGAATaGGGACACCGTAAACAGAGTGCAGTAATGGGGCCCCTGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: LDSAVNVIRISSFQE*GHRKQSAVMGPLLN Trigger: ATTAAGCAGGGGCCCCATTACTGCACTCTGTTTACGGTGTCCTCATTCTTGGAAACTGGAAATTCTGATAACATTTACTGCACTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | AGCCTGGCAGCAGACCACCAGGAGGGTCCGCAGGGCTaGTGGGTCCTTAGAGCACTCTGTTCCTTCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLAADHQEGPQG*WVLRALCSFSQ Trigger: CTGGCTGAAGGAACAGAGTGCTCTAAGGACCCACCAGCCCTGCGGACCCTCCTGGTGGTCTGCTGCCAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | CTGGCAGCAGACCACCAGGAGGGTCCGCAGGGCTGGTaGGTCCTTAGAGCACTCTGTTCCTTCAGCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LAADHQEGPQGW*VLRALCSFSQV Trigger: TACCTGGCTGAAGGAACAGAGTGCTCTAAGGACCCACCAGCCCTGCGGACCCTCCTGGTGGTCTGCTGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | CCACTAGGTCTCACCCCCGTGGAGCTGCCCAGATTTTaGCACAGCCCATCACTGGAGCCCGCCAAGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: PLGLTPVELPRF*HSPSLEPAKMF Trigger: AAACATCTTGGCGGGCTCCAGTGATGGGCTGTGGCAAAATCTGGGCAGCTCCACGGGGGTGAGACCTAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 72 bp | GGAAGCAGGGGGCTAGGGCATAACTTGCCCTTGAGGTaGGGAACAGAGGGAAGTTACACACACACCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GSRGLGHNLPLR*GTEGSYTHTQE Trigger: CTCCTGGGTGTGTGTGTAACTTCCCTCTGTTCCTCACCTCAAGGGCAAGTTATGCCCTAGCCCCCTGCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | TACACGGCAATGAGAGGGGAATGGGCACATCAGTCATaGAACCTGCATAGGGTGGGGTGTGATGCCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: YTAMRGEWAHQS*NLHRVGCDALS Trigger: ACTCAGGGCATCACACCCCACCCTATGCAGGTTCCATGACTGATGTGCCCATTCCCCTCTCATTGCCGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | CTGTTTAGTGAAGGTGCCCATCATCCAAGGGGTCTGTaGCTTCTGTTGTCCATGGGCTGGCATGACAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LFSEGAHHPRGL*LLLSMGWHDSW Trigger: CCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACCTTCACTAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 72 bp | CTCCTGGCCTCTGGTCAAGCCTCCCCAATGGTCCTATaGTACACTAATTGCTCCCAGACCTGTAACCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLASGQASPMVL*YTNCSQTCNLP Trigger: TGGGAGGTTACAGGTCTGGGAGCAATTAGTGTACAATAGGACCATTGGGGAGGCTTGACCAGAGGCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | TCTGTTCCTTCAGCCAGGTATGAATCTGCCCAGAGGTaGAATCAGCTCAGGTCCTGTTTCTTAGCCCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVPSARYESAQR*NQLRSCFLALW Trigger: CCACAGGGCTAAGAAACAGGACCTGAGCTGATTGCACCTCTGGGCAGATTCATACCTGGCTGAAGGAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 90 bp | CCTCTCTCTTCATGCCCACAGCCTCTCTACCAACTCACACCTTCTTaGTCTCGGCCTGAACAACAACCAGTGTCTCCTAACTGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLSSCPQPLYQLTPS*SRPEQQPVSPNWSL Trigger: AAGAGACCAGTTAGGAGACACTGGTTGTTGTTCAGGCCGAGACAAAGAAGGTGTGAGTTGGTAGAGAGGCTGTGGGCATGAAGAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 90 bp | AAGTTACACACACACCCAGGAGCAAGGGGACCAGAAGAGGAAGGATaGCAGGTTCTGAGAGAAGGTTGCTTAAAGGGGGAAGGACTCATG | + |
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Preference number: 6 (lower is better) Translates to: KLHTHPGARGPEEEG*QVLREGCLKGEGLM Trigger: CATGAGTCCTTCCCCCTTTAAGCAACCTTCTCTCAGAACCTGCAATCCTTCCTCTTCTGGTCCCCTTGCTCCTGGGTGTGTGTGTAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | ATGGGCTCACGTGAGAGACACAGCCGATGTACTGGTTaGAGACTTAGGCTTACCAAAGCCAATCCCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: MGSRERHSRCTG*RLRLTKANPQI Trigger: GATTTGGGGATTGGCTTTGGTAAGCCTAAGTCTGCAACCAGTACATCGGCTGTGTCTCTCACGTGAGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | CTATGTAGCTCCTGGCCTCTGGTCAAGCCTCCCCAATaGTCCTATTGTACACTAATTGCTCCCAGACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LCSSWPLVKPPQ*SYCTLIAPRPV Trigger: TACAGGTCTGGGAGCAATTAGTGTACAATAGGACCATTGGGGAGGCTTGACCAGAGGCCAGGAGCTACATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 72 bp | TCATGCCCACAGCCTCTCTACCAACTCACACCTTCTTaGTCTCGGCCTGAACAACAACCAGTGTCTCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: SCPQPLYQLTPS*SRPEQQPVSPN Trigger: GTTAGGAGACACTGGTTGTTGTTCAGGCCGAGACAAAGAAGGTGTGAGTTGGTAGAGAGGCTGTGGGCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 72 bp | GAAGGTGCCCATCATCCAAGGGGTCTGTGCCTTCTGTaGTCCATGGGCTGGCATGACAGTTGGTTTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: EGAHHPRGLCLL*SMGWHDSWFDK Trigger: TTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 72 bp | AGTCATGGAACCTGCATAGGGTGGGGTGTGATGCCCTaGGTGCACAGACTGTTTTCAAAGAGTCTTAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SHGTCIGWGVMP*VHRLFSKSLKD Trigger: GTCCTTAAGACTCTTTGAAAACAGTCTGTGCACTCAGGGCATCACACCCCACCCTATGCAGGTTCCATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | CCCATCATCCAAGGGGTCTGTGCCTTCTGTTGTCCATaGGCTGGCATGACAGTTGGTTTGATAAATGGATAC | + |
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Preference number: 6 (lower is better) Translates to: PIIQGVCAFCCP*AGMTVGLINGY Trigger: GTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 90 bp | CTGTTTAGTGAAGGTGCCCATCATCCAAGGGGTCTGTGCCTTCTGTaGTCCATGGGCTGGCATGACAGTTGGTTTGATAAATGGATACGA | + |
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Preference number: 6 (lower is better) Translates to: LFSEGAHHPRGLCLL*SMGWHDSWFDKWIR Trigger: TCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATGATGGGCACCTTCACTAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | TGTTGGGGTCCTTTTCAGATGACACTCCTTGTGTCCTaGAGACACTGTTCTTGTTCTCACAAAGCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CWGPFQMTLLVS*RHCSCSHKAHS Trigger: GCTGTGAGCTTTGTGAGAACAAGAACAGTGTCTGCAGGACACAAGGAGTGTCATCTGAAAAGGACCCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | CATCCAAGGGGTCTGTGCCTTCTGTTGTCCATGGGCTaGCATGACAGTTGGTTTGATAAATGGATACGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HPRGLCLLLSMG*HDSWFDKWIRR Trigger: TCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAGACCCCTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 72 bp | TCAGATGACACTCCTTGTGTCCTGCAGACACTGTTCTaGTTCTCACAAAGCTCACAGCATCCTAGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SDDTPCVLQTLF*FSQSSQHPRKT Trigger: TGTCTTCCTAGGATGCTGTGAGCTTTGTGAGAACAAGAACAGTGTCTGCAGGACACAAGGAGTGTCATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | CTGTGCCTTCTGTTGTCCATGGGCTGGCATGACAGTTaGTTTGATAAATGGATACGAAGAAGAAGATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LCLLLSMGWHDS*FDKWIRRRRCH Trigger: GTGACATCTTCTTCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAACAGAAGGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | AGTGCAGTAATGGGGCCCCTGCTTAATACTTGTATTTaGAAATCTGAGCTGACTCTGTTTAGTGAAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SAVMGPLLNTCI*KSELTLFSEGA Trigger: GGCACCTTCACTAAACAGAGTCAGCTCAGATTTCCAAATACAAGTATTAAGCAGGGGCCCCATTACTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 90 bp | CCCAGATTTTGCCACAGCCCATCACTGGAGCCCGCCAAGATGTTTTaGAACATTGTTATCCCAAATTTGCTGTTCTTTCCAGATTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PRFCHSPSLEPAKMF*NIVIPNLLFFPDLC Trigger: ACACAAATCTGGAAAGAACAGCAAATTTGGGATAACAATGTTCAAAAACATCTTGGCGGGCTCCAGTGATGGGCTGTGGCAAAATCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 72 bp | GCAGTAAATGTTATCAGAATTTCCAGTTTCCAAGAATaGGGACACCGTAAACAGAGTGCAGTAATGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVNVIRISSFQE*GHRKQSAVMGP Trigger: GGGCCCCATTACTGCACTCTGTTTACGGTGTCCTCATTCTTGGAAACTGGAAATTCTGATAACATTTACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CCA 72 bp | TTGTCCATGGGCTGGCATGACAGTTGGTTTGATAAATaGATACGAAGAAGAAGATGTCACTATTGTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LSMGWHDSWFDK*IRRRRCHYCDD Trigger: GTCATCACAATAGTGACATCTTCTTCTTCGTATCCATTTATCAAACCAACTGTCATGCCAGCCCATGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 72 bp | CCCGCCAAGATGTTTTTGAACATTGTTATCCCAAATTaGCTGTTCTTTCCAGATTTGTGTCACCTGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: PAKMFLNIVIPN*LFFPDLCHLHS Trigger: ACTGTGCAGGTGACACAAATCTGGAAAGAACAGCAAATTTGGGATAACAATGTTCAAAAACATCTTGGCGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS TCA 72 bp | TTGCTGTTCTTTCCAGATTTGTGTCACCTGCACAGTTaGCAAACATGTTCTCATTATCTTCATCCCAATAGC | + |
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Preference number: 6 (lower is better) Translates to: LLFFPDLCHLHS*QTCSHYLHPNS Trigger: GCTATTGGGATGAAGATAATGAGAACATGTTTGTCAACTGTGCAGGTGACACAAATCTGGAAAGAACAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS CAA 90 bp | GACTTTACAATGAAACCTATTGCATGTTTTCACATGGATTTAGGTTaGTCCTGCTTTTCTAATTCATTCGAGCACTGTACTGCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DFTMKPIACFHMDLG*SCFSNSFEHCTASA Trigger: GGCTGAAGCAGTACAGTGCTCGAATGAATTAGAAAAGCAGGACAAACCTAAATCCATGTGAAAACATGCAATAGGTTTCATTGTAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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| CDS GCA 72 bp | AACAAAGCAACCATGGGACTTTACAATGAAACCTATTaGATGTTTTCACATGGATTTAGGTTTGTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NKATMGLYNETY*MFSHGFRFVLL Trigger: AAGCAGGACAAACCTAAATCCATGTGAAAACATGCAATAGGTTTCATTGTAAAGTCCCATGGTTGCTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629082.1 |
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