Pregenerated sensors for SALL4 (Homo sapiens)
Ensembl gene IDs: ENSG00000101115Ensembl transcript IDs: ENST00000481363.1, ENST00000483130.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGCTTGCCGCGGTTATTTTTAGGAAGTCGGAAATCAAAGATGGCTaGAGGTCAGGCCCCGAAAGGTTAGGGCGAAGATCGGCAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GLAAVIFRKSEIKDG*RSGPERLGRRSAGG Trigger: GCCGCCTGCCGATCTTCGCCCTAACCTTTCGGGGCCTGACCTCCAGCCATCTTTGATTTCCGACTTCCTAAAAATAACCGCGGCAAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483130.1 |
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| CDS CCA 90 bp | CCTCCCTGCTGTCCTCTCAGGTATACCCCATCATCAAGATATCAATaGAGCTTGGGGCCACAGGACAAAGACAGGCATATCTCAGACCCA | + |
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Preference number: 5 (lower is better) Translates to: PPCCPLRYTPSSRYQ*SLGPQDKDRHISDP Trigger: TGGGTCTGAGATATGCCTGTCTTTGTCCTGTGGCCCCAAGCTCCATTGATATCTTGATGATGGGGTATACCTGAGAGGACAGCAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481363.1 |
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| CDS TCA 90 bp | CCGAACTTGGGACTGTGTTTTAGCCAGATGCTGGGGTCCTTCACATaGTGCCTGGAAGTCTCTCGAAGCTACTTCATTGTTCTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PNLGLCFSQMLGSFT*CLEVSRSYFIVLTS Trigger: GGAGGTGAGAACAATGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS GCA 90 bp | GCCTACACATTGCAACTCCGAACTTGGGACTGTGTTTTAGCCAGATaGTGGGGTCCTTCACATGATGCCTGGAAGTCTCTCGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: AYTLQLRTWDCVLAR*WGPSHDAWKSLEAT Trigger: AGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CCA 90 bp | GCTGTCCTCTCAGGTATACCCCATCATCAAGATATCAATGGAGCTTaGGGCCACAGGACAAAGACAGGCATATCTCAGACCCAGCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: AVLSGIPHHQDINGA*GHRTKTGISQTQQL Trigger: TAGCTGCTGGGTCTGAGATATGCCTGTCTTTGTCCTGTGGCCCCAAGCTCCATTGATATCTTGATGATGGGGTATACCTGAGAGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481363.1 |
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| CDS CCA 90 bp | TGGGACTGTGTTTTAGCCAGATGCTGGGGTCCTTCACATGATGCCTaGAAGTCTCTCGAAGCTACTTCATTGTTCTCACCTCCCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: WDCVLARCWGPSHDA*KSLEATSLFSPPCC Trigger: ACAGCAGGGAGGTGAGAACAATGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CCA 90 bp | AGCACTTTAGGGTTAGTGCCAGCCTACACATTGCAACTCCGAACTTaGGACTGTGTTTTAGCCAGATGCTGGGGTCCTTCACATGATGCC | + |
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Preference number: 5 (lower is better) Translates to: STLGLVPAYTLQLRT*DCVLARCWGPSHDA Trigger: GGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGCTGGCACTAACCCTAAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS GCA 90 bp | GATGCCTGGAAGTCTCTCGAAGCTACTTCATTGTTCTCACCTCCCTaGTGTCCTCTCAGGTATACCCCATCATCAAGATATCAATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DAWKSLEATSLFSPP*CPLRYTPSSRYQWS Trigger: GCTCCATTGATATCTTGATGATGGGGTATACCTGAGAGGACAGCAGGGAGGTGAGAACAATGAAGTAGCTTCGAGAGACTTCCAGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CCA 90 bp | TACACATTGCAACTCCGAACTTGGGACTGTGTTTTAGCCAGATGCTaGGGTCCTTCACATGATGCCTGGAAGTCTCTCGAAGCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: YTLQLRTWDCVLARC*GPSHDAWKSLEATS Trigger: TGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CCA 72 bp | GGGTTAGTGCCAGCCTACACATTGCAACTCCGAACTTaGGACTGTGTTTTAGCCAGATGCTGGGGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GLVPAYTLQLRT*DCVLARCWGPS Trigger: TGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGCTGGCACTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CAA 72 bp | AGGGTTAGTGCCAGCCTACACATTGCAACTCCGAACTaGGGACTGTGTTTTAGCCAGATGCTGGGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RVSASLHIATPN*GLCFSQMLGSF Trigger: GAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGCTGGCACTAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CAA 90 bp | TGGGTGGTTCACTGGAGCACTTTAGGGTTAGTGCCAGCCTACACATaGCAACTCCGAACTTGGGACTGTGTTTTAGCCAGATGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: WVVHWSTLGLVPAYT*QLRTWDCVLARCWG Trigger: ACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGCTGGCACTAACCCTAAAGTGCTCCAGTGAACCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CAA 90 bp | TGCTGTCCTCTCAGGTATACCCCATCATCAAGATATCAATGGAGCTaGGGGCCACAGGACAAAGACAGGCATATCTCAGACCCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CCPLRYTPSSRYQWS*GPQDKDRHISDPAA Trigger: AGCTGCTGGGTCTGAGATATGCCTGTCTTTGTCCTGTGGCCCCAAGCTCCATTGATATCTTGATGATGGGGTATACCTGAGAGGACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481363.1 |
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| CDS CAA 90 bp | TGGGGTCCTTCACATGATGCCTGGAAGTCTCTCGAAGCTACTTCATaGTTCTCACCTCCCTGCTGTCCTCTCAGGTATACCCCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: WGPSHDAWKSLEATS*FSPPCCPLRYTPSS Trigger: TGATGATGGGGTATACCTGAGAGGACAGCAGGGAGGTGAGAACAATGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS GCA 72 bp | TTGCAACTCCGAACTTGGGACTGTGTTTTAGCCAGATaGTGGGGTCCTTCACATGATGCCTGGAAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LQLRTWDCVLAR*WGPSHDAWKSL Trigger: GAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS GCA 72 bp | CAATGGAGCAGCTTGCCTTTGCTGTATACACAAGCTTaGCTCTTCTGTAGCCTCCACCAGCAACATCCCACT | + |
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Preference number: 6 (lower is better) Translates to: QWSSLPLLYTQA*LFCSLHQQHPT Trigger: AGTGGGATGTTGCTGGTGGAGGCTACAGAAGAGGCAAGCTTGTGTATACAGCAAAGGCAAGCTGCTCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483130.1 |
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| CDS CCA 72 bp | GCGGTTATTTTTAGGAAGTCGGAAATCAAAGATGGCTaGAGGTCAGGCCCCGAAAGGTTAGGGCGAAGATCG | + |
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Preference number: 6 (lower is better) Translates to: AVIFRKSEIKDG*RSGPERLGRRS Trigger: CGATCTTCGCCCTAACCTTTCGGGGCCTGACCTCCAGCCATCTTTGATTTCCGACTTCCTAAAAATAACCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483130.1 |
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| CDS CAA 72 bp | CACTGGAGCACTTTAGGGTTAGTGCCAGCCTACACATaGCAACTCCGAACTTGGGACTGTGTTTTAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HWSTLGLVPAYT*QLRTWDCVLAR Trigger: TCTGGCTAAAACACAGTCCCAAGTTCGGAGTTGCAATGTGTAGGCTGGCACTAACCCTAAAGTGCTCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS TCA 72 bp | GGACTGTGTTTTAGCCAGATGCTGGGGTCCTTCACATaGTGCCTGGAAGTCTCTCGAAGCTACTTCATTGTT | + |
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Preference number: 6 (lower is better) Translates to: GLCFSQMLGSFT*CLEVSRSYFIV Trigger: AACAATGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAACACAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS CCA 72 bp | TCAGGTATACCCCATCATCAAGATATCAATGGAGCTTaGGGCCACAGGACAAAGACAGGCATATCTCAGACC | + |
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Preference number: 6 (lower is better) Translates to: SGIPHHQDINGA*GHRTKTGISQT Trigger: GGTCTGAGATATGCCTGTCTTTGTCCTGTGGCCCCAAGCTCCATTGATATCTTGATGATGGGGTATACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481363.1 |
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| CDS CCA 72 bp | TGTCCTCTCAGGTATACCCCATCATCAAGATATCAATaGAGCTTGGGGCCACAGGACAAAGACAGGCATATC | + |
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Preference number: 6 (lower is better) Translates to: CPLRYTPSSRYQ*SLGPQDKDRHI Trigger: GATATGCCTGTCTTTGTCCTGTGGCCCCAAGCTCCATTGATATCTTGATGATGGGGTATACCTGAGAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481363.1 |
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| CDS CCA 72 bp | GTTTTAGCCAGATGCTGGGGTCCTTCACATGATGCCTaGAAGTCTCTCGAAGCTACTTCATTGTTCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: VLARCWGPSHDA*KSLEATSLFSP Trigger: AGGTGAGAACAATGAAGTAGCTTCGAGAGACTTCCAGGCATCATGTGAAGGACCCCAGCATCTGGCTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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| CDS GCA 72 bp | AAGTCTCTCGAAGCTACTTCATTGTTCTCACCTCCCTaGTGTCCTCTCAGGTATACCCCATCATCAAGATAT | + |
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Preference number: 6 (lower is better) Translates to: KSLEATSLFSPP*CPLRYTPSSRY Trigger: ATATCTTGATGATGGGGTATACCTGAGAGGACAGCAGGGAGGTGAGAACAATGAAGTAGCTTCGAGAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481363.1 ENST00000483130.1 |
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