Pregenerated sensors for SALL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000103449Ensembl transcript IDs: ENST00000251020.9, ENST00000440970.5, ENST00000562674.1, ENST00000566102.1, ENST00000570206.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTaGAACATTTCTGGGAACTTGACGGGATTGCCTCCTAGAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: KLEGSPLPDLAAKSF*NISGNLTGLPPRNV Trigger: GACATTTCTAGGAGGCAATCCCGTCAAGTTCCCAGAAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| 3UTR TCA 72 bp | ATACTGATTCCAGAAGCTGGAAGGATCCCCACTTCCTaGTCTTGCCGCCAAATCCTTCTGGAACATTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ILIPEAGRIPTS*SCRQILLEHFW Trigger: CCAGAAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCTTCTGGAATCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR TCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCGGGAGCATTGGGCTCTaGGTTCTGGAGCCTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRGSIGL*VLEPLQ Trigger: CTGGAGAGGCTCCAGAACTCAGAGCCCAATGCTCCC...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCTTGGGCTCTGAGTTCTaGAGCCTCTCCAGGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRLGSEF*SLSRFP Trigger: GGGAAACCTGGAGAGGCTCCAGAACTCAGAGCCCAA...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTCGGCCAGGGGAGCATTaGGCTCTGAGTTCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFRPGEH*ALSSGA Trigger: GGCTCCAGAACTCAGAGCCCAATGCTCCCCTGGCCG...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR TCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTCCTCCACGAAGCGGGTaGAGCGGAAGTTGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFPPRSG*SGSWFR Trigger: ACGGAACCAACTTCCGCTTCACCCGCTTCGTGGAGG...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR GCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCCCCGTTGGAGAGCGCTaGTGCATACTGATTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRPVGER*CILIPE Trigger: TTCTGGAATCAGTATGCAGCAGCGCTCTCCAACGGG...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCCTCCTAGAAATGTCATaGGGCCATCCACAGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRLLEMS*GHPQRA Trigger: GGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAG...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR GCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCTGGTTCCGTTCTCACTaGTTGCCATTTTCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRWFRSH*LPFSPG Trigger: GCCTGGAGAAAATGGCAAGCAGTGAGAACGGAACCA...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCACTGATTCCAGAAGCTaGAAGGATCCCCACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRTDSRS*KDPHFL Trigger: CAGGAAGTGGGGATCCTTCCAGCTTCTGGAATCAGT...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTTCATCGCCAGCCCGTTaGAGAGCGCTGCTGCATACT | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFSSPAR*RALLHT Trigger: AGTATGCAGCAGCGCTCTCCAACGGGCTGGCGATGA...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR TCA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCACATTTCTGGGAACTTaGCGGGATTGCCTCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: NLTGLPPRNVMGPSTESRTFLGT*RDCLLE Trigger: TTCTAGGAGGCAATCCCGTCAAGTTCCCAGAAATGT...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR GCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTTCCGTTCTCACTGCTTaGCATTTTCTCCAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFSVLTA*HFLQAG Trigger: GCCGGCCTGGAGAAAATGGCAAGCAGTGAGAACGGA...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR TCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTAGGATCCCCACTTCCTaGTCTTGCCGCCAAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFRIPTS*SCRQIL Trigger: AAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCT...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR TCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTTCGGATTGGAAATGTTaGGGCTTCGCTTGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFSDWKC*GFACFL Trigger: GAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGA...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR GCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTGTTGGAGAGCGCTGCTaGATACTGATTCCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFVGERC*ILIPEA Trigger: AGCTTCTGGAATCAGTATGCAGCAGCGCTCTCCAAC...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CCA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTGCCGCCAAATCCTTCTaGAACATTTCTGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: SWKDPHFLILPPNPSGTFAAKSF*NISGNL Trigger: CAAGTTCCCAGAAATGTTCCAGAAGGATTTGGCGGC...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS GCA 90 bp | TCGCTGAGGTACCTGTGGAGGAGCTGCCGCCGCCGCCGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTTGGGGCGGTACTGCTGTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLRYLWRSCRRRRCC*CCCCCCLGRYCCGC Trigger: GCAGCCACAGCAGTACCGCCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCAGCTCCTCCACAGGTACCTCAGCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000251020.9 ENST00000440970.5 ENST00000570206.1 |
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| CDS TCA 90 bp | TCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATTGGAAATGTTaGGGCTTCGCTTGCTTCCTCCGCGACATGCTGGCTCAAACATCA | + |
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Preference number: 5 (lower is better) Translates to: SRRGSEATSGSDWKC*GFACFLRDMLAQTS Trigger: TGATGTTTGAGCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS-3UTR CAA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCTTCATCGCCAGCCCGTaGGAGAGCGCTGCTGCATAC | + |
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Preference number: 5 (lower is better) Translates to: NLTGLPPRNVMGPSTESRFIASP*ESAAAY Trigger: GTATGCAGCAGCGCTCTCCAACGGGCTGGCGATGAA...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS CCA 90 bp | CCATTGTTTGCCCAGCATGGGGAACACCAACTTCTGTTGTACAAATaGTGTGTGGTCATCTACGAAGGCATCTCGCCGGGGGAGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PLFAQHGEHQLLLYK*CVVIYEGISPGERG Trigger: GCCTCGCTCCCCCGGCGAGATGCCTTCGTAGATGACCACACACCATTTGTACAACAGAAGTTGGTGTTCCCCATGCTGGGCAAACAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS-3UTR CAA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCCCCCACTTCCTGATCTaGCCGCCAAATCCTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: NLTGLPPRNVMGPSTESRPHFLI*PPNPSG Trigger: TCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGG...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CAA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCTTCCGTTCTCACTGCTaGCCATTTTCTCCAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: NLTGLPPRNVMGPSTESRFRSHC*PFSPGR Trigger: CCGGCCTGGAGAAAATGGCAAGCAGTGAGAACGGAA...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CAA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCGTCGGATTGGAAATGTaGAGGCTTCGCTTGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: NLTGLPPRNVMGPSTESRVGLEM*RLRLLP Trigger: AGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGAC...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CAA 90 bp | AACTTGACGGGATTGCCTCCTAGAAATGTCATGGGGCCATCCACAGAGAGCCGCGGGAACTTGACGGGATaGCCTCCTAGAAATGTCATG | + |
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Preference number: 5 (lower is better) Translates to: NLTGLPPRNVMGPSTESRGNLTG*PPRNVM Trigger: CATGACATTTCTAGGAGGCAATCCCGTCAAGTTCCC...GCGGCTCTCTGTGGATGGCCCCATGACATTTCTAGGAGGCAATCCCGTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CAA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SWKDPHFLILPPNPSGTFHFGVG*EMLRLR Trigger: GCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTG...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS-3UTR CAA 90 bp | AGCTGGAAGGATCCCCACTTCCTGATCTTGCCGCCAAATCCTTCTGGAACATTTAACATTTCTGGGAACTaGACGGGATTGCCTCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: SWKDPHFLILPPNPSGTFNISGN*TGLPPR Trigger: TCTAGGAGGCAATCCCGTCAAGTTCCCAGAAATGTT...AAATGTTCCAGAAGGATTTGGCGGCAAGATCAGGAAGTGGGGATCCTTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566102.1 |
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| CDS CCA 90 bp | AGAAAAATCTCTAACTCCAAGCTAACATCCTATTCAAAGACAGGATaGCTTCCCATTGTTTGCCCAGCATGGGGAACACCAACTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: RKISNSKLTSYSKTG*LPIVCPAWGTPTSV Trigger: AACAGAAGTTGGTGTTCCCCATGCTGGGCAAACAATGGGAAGCCATCCTGTCTTTGAATAGGATGTTAGCTTGGAGTTAGAGATTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS GCA 72 bp | CGCCGCCGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTTGGGGCGGTACTGCTGTGGCTGCCGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RRRRCCCCCCCC*LGRYCCGCRWK Trigger: CTTCCAGCGGCAGCCACAGCAGTACCGCCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000251020.9 ENST00000440970.5 ENST00000570206.1 |
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| CDS CCA 72 bp | GCCGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTaGGGCGGTACTGCTGTGGCTGCCGCTGGAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AAAAAAAAAAAA*GGTAVAAAGSA Trigger: GGCACTTCCAGCGGCAGCCACAGCAGTACCGCCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251020.9 ENST00000440970.5 ENST00000570206.1 |
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| CDS CAA 90 bp | TGTGTCTCCATCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGCTTGCTTCCTCCGCGACATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CVSISPGERGHFGVG*EMLRLRLLPPRHAG Trigger: GCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGATGGAGACACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251020.9 |
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| CDS CAA 90 bp | TACGAAGGCATCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGCTTGCTTCCTCCGCGACATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: YEGISPGERGHFGVG*EMLRLRLLPPRHAG Trigger: GCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGATGCCTTCGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS CAA 72 bp | GGGGAGCGAGGCCACTTCGGGGTCGGATTGGAAATGTaGAGGCTTCGCTTGCTTCCTCCGCGACATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GERGHFGVGLEM*RLRLLPPRHAG Trigger: GCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS CAA 72 bp | ATCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGCTTGCTTCCTCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: ISPGERGHFGVG*EMLRLRLLPPR Trigger: TCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000251020.9 ENST00000562674.1 ENST00000566102.1 |
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| CDS TCA 72 bp | GGGAGCGAGGCCACTTCGGGGTCGGATTGGAAATGTTaGGGCTTCGCTTGCTTCCTCCGCGACATGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSEATSGSDWKC*GFACFLRDMLA Trigger: AGCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS CAA 90 bp | ATCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATTGGAAATGTaGAGGCTTCGCTTGCTTCCTCCGCGACATGCTGGCTCAAACATC | + |
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Preference number: 6 (lower is better) Translates to: ISPGERGHFGVGLEM*RLRLLPPRHAGSNI Trigger: GATGTTTGAGCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS CAA 90 bp | GAGCGAGGCCACTTCGGGGTCGGATTGGAAATGTTGAGGCTTCGCTaGCTTCCTCCGCGACATGCTGGCTCAAACATCAGCTGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ERGHFGVGLEMLRLR*LPPRHAGSNISWGR Trigger: TCTGCCCCAGCTGATGTTTGAGCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS CCA 72 bp | GCCCAGCATGGGGAACACCAACTTCTGTTGTACAAATaGTGTGTGGTCATCTACGAAGGCATCTCGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: AQHGEHQLLLYK*CVVIYEGISPG Trigger: CCCCGGCGAGATGCCTTCGTAGATGACCACACACCATTTGTACAACAGAAGTTGGTGTTCCCCATGCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS CAA 72 bp | CACTTCGGGGTCGGATTGGAAATGTTGAGGCTTCGCTaGCTTCCTCCGCGACATGCTGGCTCAAACATCAGC | + |
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Preference number: 6 (lower is better) Translates to: HFGVGLEMLRLR*LPPRHAGSNIS Trigger: GCTGATGTTTGAGCCAGCATGTCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251020.9 ENST00000562674.1 |
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| CDS CCA 72 bp | ATGGGGAACACCAACTTCTGTTGTACAAATGGTGTGTaGTCATCTACGAAGGCATCTCGCCGGGGGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: MGNTNFCCTNGV*SSTKASRRGSE Trigger: CTCGCTCCCCCGGCGAGATGCCTTCGTAGATGACCACACACCATTTGTACAACAGAAGTTGGTGTTCCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS CAA 90 bp | GATGGCTTCCCATTGTTTGCCCAGCATGGGGAACACCAACTTCTGTaGTACAAATGGTGTGTGGTCATCTACGAAGGCATCTCGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: DGFPLFAQHGEHQLL*YKWCVVIYEGISPG Trigger: CCCCGGCGAGATGCCTTCGTAGATGACCACACACCATTTGTACAACAGAAGTTGGTGTTCCCCATGCTGGGCAAACAATGGGAAGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS CAA 72 bp | CCATTGTTTGCCCAGCATGGGGAACACCAACTTCTGTaGTACAAATGGTGTGTGGTCATCTACGAAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: PLFAQHGEHQLL*YKWCVVIYEGI Trigger: GATGCCTTCGTAGATGACCACACACCATTTGTACAACAGAAGTTGGTGTTCCCCATGCTGGGCAAACAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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| CDS CAA 90 bp | CTCCAAGCTAACATCCTATTCAAAGACAGGATGGCTTCCCATTGTTaGCCCAGCATGGGGAACACCAACTTCTGTTGTACAAATGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LQANILFKDRMASHC*PSMGNTNFCCTNGV Trigger: CACACCATTTGTACAACAGAAGTTGGTGTTCCCCATGCTGGGCAAACAATGGGAAGCCATCCTGTCTTTGAATAGGATGTTAGCTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562674.1 |
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