Pregenerated sensors for SAFB (Homo sapiens)
Ensembl gene IDs: ENSG00000160633Ensembl transcript IDs: ENST00000292123.9, ENST00000454510.5, ENST00000586281.1, ENST00000586934.5, ENST00000588852.2, ENST00000589006.1, ENST00000589863.5, ENST00000590485.1, ENST00000591666.5, ENST00000591991.1, ENST00000592224.5, ENST00000592555.1
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACGCACCCTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTaGCCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HAPYGTLSLLTSEAP*PYQRTRRTASLCWL Trigger: CAGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAGGGTGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR TCA 90 bp | CTTCCTGACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTaGTCATCTTGGTCCTTACTCTTTTCTCCACTTCCGTCGTCACCC | + |
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Preference number: 1 (lower is better) Translates to: LPDFVARDRSEGPGF*SSWSLLFSPLPSSP Trigger: GGGTGACGACGGAAGTGGAGAAAAGAGTAAGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGTCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR GCA 90 bp | CCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCTGATTTaGGATCCTGGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTTT | + |
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Preference number: 1 (lower is better) Translates to: PYQRTRRTASLCWLI*DPGFWKLSLWTRTF Trigger: AAACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTGACTTCCTGACTTTGTaGCTCGAGATCGCTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALPLRLHALFAFTAFTHPDFLTL*LEIALR Trigger: CCTCAGAGCGATCTCGAGCCACAAAGTCAGGAAGTC...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 90 bp | TCACGCACCCTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTaGACCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRTLWDSESLDFRGS*TLSKDTTDRFSLLA Trigger: AGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAGGGTGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR TCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACGGCTCGAGATCGCTCTaGGGGGCCAGGTTTCTGATC | + |
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Preference number: 2 (lower is better) Translates to: LWDSESLDFRGSLTLSKDGSRSL*GARFLI Trigger: GATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCC...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | CTCGACTTCCTGACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATTTGTCACAACCTTaGCGCCCACCACCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LDFLTLWLEIALRGQVSDHLSQP*RPPPSH Trigger: ATGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATG...ATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGTCAGGAAGTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 90 bp | ACCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCTGATTaGCGATCCTGGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTT | + |
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Preference number: 2 (lower is better) Translates to: TLSKDTTDRFSLLAD*RSWLLEALSLDPDV Trigger: AACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCTGCTGTGGACATCGTaGCAAAACCGTAACAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: TLWLEIALRGQVSDHLGPLLWTS*QNRNSE Trigger: CTCGCTGTTACGGTTTTGTCACGATGTCCACAGCAG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTGAGATCATCTTTCCGTaGAGCTCCGTCTTGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLWLEIALRGQVSDHLGPEIIFP*SSVLCR Trigger: CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTC...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTTGGAGCTCCGTCTTGTaGAGGTGGTTAATGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: TLWLEIALRGQVSDHLGPWSSVL*RWLMHF Trigger: AAAATGCATTAACCACCTGCACAAGACGGAGCTCCA...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCCACAGGTTCATTTTTaGCTTTCTCCACGGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: TLWLEIALRGQVSDHLGPPQVHF*LSPRRS Trigger: TGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACTGCGATCCTGGCTTTTaGAAGCTCTCTCTTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: LWDSESLDFRGSLTLSKDCDPGF*KLSLWT Trigger: GGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCA...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTTATTTTCTCATTTTCTaGCTCCAGGGATGGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TLWLEIALRGQVSDHLGPYFLIF*LQGWLF Trigger: GAAGAGCCATCCCTGGAGCCAGAAAATGAGAAAATA...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACGCTGATTTGCGATCCTaGCTTTTGGAAGCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LWDSESLDFRGSLTLSKDADLRS*LLEALS Trigger: AGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGC...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGAATTTCTACCACAACTaGTGCGACCCTTTTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRNFYHN*CDPFPL Trigger: AAGAGGAAAAGGGTCGCAGCAGTTGTGGTAGAAATT...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGTTCATTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGGACCCTTTTCCTCTTTaGAAAGCCTTTTTGTATCCG | + |
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Preference number: 2 (lower is better) Translates to: PQVHFWLSPRRSSFRGAPDPFPL*KAFLYP Trigger: CGGATACAAAAAGGCTTTCCAAAGAGGAAAAGGGTC...CGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR GCA 72 bp | GCTCCTGCTCGCGCCTGCGCTCGTGCTCCACGTGCATaGGTTCGCGCTCCAGCCGTTCCCGCTCCATGCGCT | + |
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Preference number: 3 (lower is better) Translates to: APARACARAPRA*VRAPAVPAPCA Trigger: AGCGCATGGAGCGGGAACGGCTGGAGCGCGAACGCATGCACGTGGAGCACGAGCGCAGGCGCGAGCAGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCAGCATTTGTCACAACCTaGGCGCCCACCACCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: RSSRSHCACMRCSRSLRSAFVTT*APTTFP Trigger: TGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATGC...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACCGTGGAGCTCCGTCTaGTGCAGGTGGTTAATGCAT | + |
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Preference number: 3 (lower is better) Translates to: RSSRSHCACMRCSRSLRSPWSSV*CRWLMH Trigger: ATGCATTAACCACCTGCACAAGACGGAGCTCCACGG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR GCA 72 bp | GCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTaGGTTCACGCACCCTATGGGACTCTGAGTCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: APTAPACVVRVH*VHAPYGTLSLL Trigger: CAAGAGACTCAGAGTCCCATAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CCA 72 bp | ACGGACCGCTTCTCTCTGCTGGCTGATTTGCGATCCTaGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTT | + |
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Preference number: 3 (lower is better) Translates to: TDRFSLLADLRS*LLEALSLDPDV Trigger: AACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGCCAGCAGAGAGAAGCGGTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACCAGGACTCCGGGCATTaGTCACAACCTTGGCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LWDSESLDFRGSLTLSKDQDSGH*SQPWRP Trigger: TGGGCGCCAAGGTTGTGACAAATGCCCGGAGTCCTG...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATAGTAGATCTGTCACTGTaGCTCGACTTCTCCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: KVRMVALIQGGPLGFRPIVDLSL*LDFSFF Trigger: GAAAAAGGAGAAGTCGAGCAACAGTGACAGATCTAC...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR TCA 72 bp | TATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTaGCCTTATCAAAGGACACGACGGACCGCTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: YGTLSLLTSEAP*PYQRTRRTASL Trigger: GAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR TCA 72 bp | TTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTaGTCATCTTGGTCCTTACTCTTTTCTCCACTTCCG | + |
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Preference number: 3 (lower is better) Translates to: FVARDRSEGPGF*SSWSLLFSPLP Trigger: CGGAAGTGGAGAAAAGAGTAAGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | GCGATCCTGGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTTTTTACACTAATCCGTCACTGTCTCTTTaGTCAGAGGTTTTCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: AILAFGSSLFGPGRFYTNPSLSL*SEVFFP Trigger: GGGAAAGAAAACCTCTGACAAAAGAGACAGTGACGG...ATTAGTGTAAAAACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATCTTTGGAAAGCCTTTTaGTATCCGAGTCATCTTCGG | + |
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Preference number: 3 (lower is better) Translates to: LFSPLPSSPFLASSFLSHLWKAF*YPSHLR Trigger: CCGAAGATGACTCGGATACAAAAAGGCTTTCCAAAG...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGGTGGATGCGCTCCTaGTCGCGCCTGCGCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRWMRS*SRLRSC Trigger: GCACGAGCGCAGGCGCGAGCAGGAGCGCATCCACCG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCTCGTGCTCCACGTaGATGCGTTCGCGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRSCST*MRSRSS Trigger: GCTGGAGCGCGAACGCATGCACGTGGAGCACGAGCG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCCTGGGGCAAAGCTaGCGCGCCCTGACATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRLGQS*RALTFL Trigger: GAGGAATGTCAGGGCGCGGCAGCTTTGCCCCAGGCG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACCAGGGCGGCCCGCTTaGCTTCCGGCCAATAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSPGRPA*LPANRH Trigger: ATGCCTATTGGCCGGAAGCCAAGCGGGCCGCCCTGG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATATCACTCGCAGGTCGCTaGGGCGCCGCGTCCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPISLAGR*GAASRS Trigger: AGACCGGGACGCGGCGCCTCAGCGACCTGCGAGTGA...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGTGCTCCACGTGCATaGGTTCGCGCTCCAGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRAPRA*VRAPAV Trigger: AACGGCTGGAGCGCGAACGCATGCACGTGGAGCACG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATACGCGCTCACGGTGGATaGGCTCCTGCTCGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPIRAHGG*APARAC Trigger: GCAGGCGCGAGCAGGAGCGCATCCACCGTGAGCGCG...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | CTCACGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTaGTTCGCGTTCACTGCGTTCACGCACCCTATGGGA | + |
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Preference number: 4 (lower is better) Translates to: LTLLALPLRLHA*FAFTAFTHPMG Trigger: TCCCATAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCGTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCTCCCACTGCGCCTaGATGCGTTGTTCGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRSHCA*MRCSRS Trigger: TGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATATCCAGCCGCTGGCGCTaGAAGGCCAGCCTCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPISSRWR*KASLSR Trigger: CCGAGAGAGGCTGGCCTTCCAGCGCCAGCGGCTGGA...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATAAGCGCGCCTCGCTTCTaGGCAGGCGCACCAAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPISAPRF*AGAPSV Trigger: TACGCTTGGTGCGCCTGCGCAGAAGCGAGGCGCGCT...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATACCATTCCAGGGACCCTaGCTCCGCCGCCCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPIPFQGP*LRRPLS Trigger: GGAAAGTGGGCGGCGGAGCCAGGGTCCCTGGAATGG...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCCGCGTCCCGGTCTCTaGCGAGGCGGAGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLWLEIALRGQVSDHLGPPRPGL*RGGAQS Trigger: GCTCTGAGCTCCGCCTCGTCAGAGACCGGGACGCGG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTCGGACCGCTTCTCTCTaGTGGCTGATTTGCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ALPLRLHALFAFTAFTHPRTASL*WLICDP Trigger: AGGATCGCAAATCAGCCAGCAGAGAGAAGCGGTCCG...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTACCGCTTCTCTCTGCTaGCTGATTTGCGATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ALPLRLHALFAFTAFTHPTASLC*LICDPG Trigger: GCCAGGATCGCAAATCAGCCAGCAGAGAGAAGCGGT...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCCTGCTCCCCCGGCTCTaGCCTCCAAACCCGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVELRLVQVVNAFCGLFCLLPRL*PPNPPC Trigger: GCAGGGCGGGTTTGGAGGCCAGAGCCGGGGGAGCAG...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACTGCTGTGGACATCGTaGCAAAACCGTAACAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSLLWTS*QNRNSE Trigger: CTCGCTGTTACGGTTTTGTCACGATGTCCACAGCAG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTGAGGGGCCAGGTTTCTaGTCATCTTGGTCCTTACTC | + |
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Preference number: 4 (lower is better) Translates to: ALPLRLHALFAFTAFTHPEGPGF*SSWSLL Trigger: GAGTAAGGACCAAGATGATCAGAAACCTGGCCCCTC...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATAGGCTCGAGATCGCTCTaGGGGGCCAGGTTTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPIGSRSL*GARFLI Trigger: GATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCC...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACGGGCATCGCTGGGCCTaGTCCCCCGGCTCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWDSESLDFRGSLTLSKDGHRWA*SPGSGL Trigger: GAGGCCAGAGCCGGGGGAGCAGGCCCAGCGATGCCC...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CCACAGGTTCATTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCCCGCTCCAGCCGCTaGCGCTGGAAGGCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQVHFWLSPRRSSFRGAPSRSSR*RWKASL Trigger: GAGGCTGGCCTTCCAGCGCCAGCGGCTGGAGCGGGA...CGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGTTCACGCACCCTATaGGACTCTGAGTCTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSRSRTL*DSESLD Trigger: GTCAAGAGACTCAGAGTCCCATAGGGTGCGTGAACG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCATCAAAACGCTCTTGTTaGCGCTCGAGTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSRSHCACMRCSRSLRSSKRSC*RSSPHS Trigger: GGAATGTGGACTCGAGCGGCAACAAGAGCGTTTTGA...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACGCCGTTCCCGCTCCATaGGCTCCCGCTCCAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWDSESLDFRGSLTLSKDAVPAP*APAPAA Trigger: AGCGGCTGGAGCGGGAGCGCATGGAGCGGGAACGGC...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCCGTCGGCCGTGCCCTaGCATGACCGGTCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLWLEIALRGQVSDHLGPPSAVP*HDRSSS Trigger: AGAGGATGACCGGTCATGGCAGGGCACGGCCGACGG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CCACAGGTTCATTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCCTCGCGCTCACGGTaGATGCGCTCCTGCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PQVHFWLSPRRSSFRGAPSSRSR*MRSCSR Trigger: GCGCGAGCAGGAGCGCATCCACCGTGAGCGCGAGGA...CGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CCACAGGTTCATTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGCGGCCGCGGTCCCTGTaGTCAAAGTCGTGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVHFWLSPRRSSFRGAPRPRSL*SKSWKR Trigger: CCGCTTCCACGACTTTGACCACAGGGACCGCGGCCG...CGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CCACAGGTTCATTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCCTCGCGCTCCCACTaGGCCTGCATGCGTTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PQVHFWLSPRRSSFRGAPSSRSH*ACMRCS Trigger: CGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGA...CGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTGCTCCTAGCACAAAATaGCGCCGCCTGCGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLWLEIALRGQVSDHLGPAPSTK*RRLRGN Trigger: GTTCCCTCGCAGGCGGCGCCATTTTGTGCTAGGAGC...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATAGACTTCCTGACTTTGTaGCTCGAGATCGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPIDFLTL*LEIALR Trigger: CCTCAGAGCGATCTCGAGCCACAAAGTCAGGAAGTC...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATAACTTCCGAGGCTCCTTaGCCTTATCAAAGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPITSEAP*PYQRTR Trigger: TCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGT...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTAAAGCTGCCGCGCCCTaGCATTCCTCCTCGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLWLEIALRGQVSDHLGPKAAAP*HSSSVH Trigger: ATGAACCGAGGAGGAATGTCAGGGCGCGGCAGCTTT...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGCCCACTGCGCCTGCATaGGTTGTTCGCGTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRPTAPA*VVRVHC Trigger: GCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGG...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTTCACAGGCACCCCTTTaGATTTATCCATTACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPLRLHALFAFTAFTHPSQAPL*IYPLLQ Trigger: CTGTAGTAATGGATAAATCCAAAGGGGTGCCTGTGA...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATATGCGATCCTGGCTTTTaGAAGCTCTCTCTTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPICDPGF*KLSLWT Trigger: GGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCA...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | CAGCGAGCTCCAGGACTCCGGGCATTTGTCACAACCTaGGCGCCCACCACCTTCCCATATTTGCTGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRAPGLRAFVTT*APTTFPYLLKR Trigger: TCTTTTCAGCAAATATGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATGCCCGGAGTCCTGGAGCTCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | CAAAACCGTAACAGCGAGCTCCAGGACTCCGGGCATTaGTCACAACCTTGGCGCCCACCACCTTCCCATATT | + |
|
Preference number: 4 (lower is better) Translates to: QNRNSELQDSGH*SQPWRPPPSHI Trigger: AATATGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATGCCCGGAGTCCTGGAGCTCGCTGTTACGGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATTGCCCCCGTCGGCCGTaGCCTGCCATGACCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFSPLPSSPFLASSFLSHCPRRP*PAMTGH Trigger: ATGACCGGTCATGGCAGGGCACGGCCGACGGGGGCA...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | AAGGACACGACGGACCGCTTCTCTCTGCTGGCTGATTaGCGATCCTGGCTTTTGGAAGCTCTCTCTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTDRFSLLAD*RSWLLEALSLD Trigger: GTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CCA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCCATTTGTCACAACCTTaGCGCCCACCACCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVELRLVQVVNAFCGLFCHLSQP*RPPPSH Trigger: ATGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATG...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTTCGTGGAAGCGGTCCTaGCGGTTAAAGTCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLWLEIALRGQVSDHLGPSWKRS*RLKSEW Trigger: CCATTCTGACTTTAACCGCCAGGACCGCTTCCACGA...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTaGACCTTATCAAAGGACACGACGGACCGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWDSESLDFRGS*TLSKDTTDRFS Trigger: AGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATATTTGCTAGACCTCTTTaGTGTTTTCTTGTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVRMVALIQGGPLGFRPIFARPL*CFLVSL Trigger: GAGGGAAACAAGAAAACATCAAAGAGGTCTAGCAAA...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCTGGAAGCTCTCTCTTTaGACCCGGACGTTTTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SVELRLVQVVNAFCGLFCWKLSL*TRTFLH Trigger: GTGTAAAAACGTCCGGGTCCAAAGAGAGAGCTTCCA...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| 3UTR CAA 72 bp | GTTCTGGGTAATGCTGTCCTTCTCGTTCTCCCATCATaGACCTTGAACCTTCTCTCCTGTCCACCGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGNAVLLVLPS*TLNLLSCPPSG Trigger: ACCACTCGGTGGACAGGAGAGAAGGTTCAAGGTCAATGATGGGAGAACGAGAAGGACAGCATTACCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCACCTTCATCTTCAATTaGCTTCTTCAGCCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVELRLVQVVNAFCGLFCTFIFN*LLQPLH Trigger: ATGGAGCGGCTGAAGAAGGCAATTGAAGATGAAGGT...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | GCGATCCTGGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTTTTTACACTAATGAGATCATCTTTCCGTaGAGCTCCGTCTTGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AILAFGSSLFGPGRFYTNEIIFP*SSVLCR Trigger: CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTC...ATTAGTGTAAAAACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCCCACAGGTTCATTTTTaGCTTTCTCCACGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVELRLVQVVNAFCGLFCPQVHF*LSPRRS Trigger: TGATCTCCGTGGAGAAAGCCAAAAATGAACCTGTGG...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATGTTGTTCGCGTTCACTaGGTTCACGCACCCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSPLPSSPFLASSFLSHVVRVH*VHAPYG Trigger: CCCATAGGGTGCGTGAACGCAGTGAACGCGAACAAC...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATCTGTGGTCAAAGTCGTaGAAGCGGTCCTGGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFSPLPSSPFLASSFLSHLWSKS*KRSWRL Trigger: TAACCGCCAGGACCGCTTCCACGACTTTGACCACAG...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGTATTTTCTCATTTTCTaGCTCCAGGGATGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRYFLIF*LQGWLF Trigger: GAAGAGCCATCCCTGGAGCCAGAAAATGAGAAAATA...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CCA 90 bp | GCGATCCTGGCTTTTGGAAGCTCTCTCTTTGGACCCGGACGTTTTTACACTAATGCTGATTTGCGATCCTaGCTTTTGGAAGCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AILAFGSSLFGPGRFYTNADLRS*LLEALS Trigger: AGAGAGAGCTTCCAAAAGCCAGGATCGCAAATCAGC...ATTAGTGTAAAAACGTCCGGGTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR GCA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACAATTTCTACCACAACTaGTGCGACCCTTTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWDSESLDFRGSLTLSKDNFYHN*CDPFPL Trigger: AAGAGGAAAAGGGTCGCAGCAGTTGTGGTAGAAATT...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS GCA 90 bp | CGCCTGCGAGGGAACCGCTCCAGTCGCCCCAGCGCGCCTCGCTTCTaGGCAGGCGCACCAAGCGTAGGTTCTAGTATCCCGGTTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RLRGNRSSRPSAPRF*AGAPSVGSSIPVAT Trigger: AGTTGCAACCGGGATACTAGAACCTACGCTTGGTGCGCCTGCGCAGAAGCGAGGCGCGCTGGGGCGACTGGAGCGGTTCCCTCGCAGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS TCA 90 bp | CGGCGTGGAACCCACGGCACATTTAGCCCACTCCACTCCCTTTGGTaGGGCCCCCAGGTACCCACAACTAGCGGGTCCCAGGAAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: RRGTHGTFSPLHSLW*GPQVPTTSGSQEDT Trigger: GGTGTCTTCCTGGGACCCGCTAGTTGTGGGTACCTGGGGGCCTCACCAAAGGGAGTGGAGTGGGCTAAATGTGCCGTGGGTTCCACGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
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| CDS GCA 90 bp | GCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTaGGTTCACGCACCCTGCTGCACAACAGTAGAGCTGCAGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: APRAPTAPACVVRVH*VHAPCCTTVELQKG Trigger: CCCCTTCTGCAGCTCTACTGTTGTGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589006.1 |
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| CDS-3UTR CAA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACAGGACTCCGGGCATTaGTCACAACCTTGGCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSRSHCACMRCSRSLRSQDSGH*SQPWRP Trigger: TGGGCGCCAAGGTTGTGACAAATGCCCGGAGTCCTG...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS-3UTR CAA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTGCATTTGTCACAACCTaGGCGCCCACCACCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPLRLHALFAFTAFTHPAFVTT*APTTFP Trigger: TGGGAAGGTGGTGGGCGCCAAGGTTGTGACAAATGC...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
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| CDS CCA 90 bp | CAGAATCACCTAGGCCTGACAGAGTCTCCGCCATTCCAGGGACCCTaGCTCCGCCGCCCACTTTCCACAGAACCGGGCCGGTTTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNHLGLTESPPFQGP*LRRPLSTEPGRFYQ Trigger: CTGATAAAACCGGCCCGGTTCTGTGGAAAGTGGGCGGCGGAGCCAGGGTCCCTGGAATGGCGGAGACTCTGTCAGGCCTAGGTGATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000586934.5 ENST00000588852.2 ENST00000589863.5 ENST00000591666.5 ENST00000592224.5 |
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| CDS CCA 90 bp | TTCCTCCCAGCAGAGAGAACTCGGGAACGCCCACTGTCCAACTCCTaGGCCAGACCACCAGAGAGCAGGCGGTGTCTGGAGTGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLPAERTRERPLSNS*ARPPESRRCLECSS Trigger: TGAAGAGCACTCCAGACACCGCCTGCTCTCTGGTGGTCTGGCCCAGGAGTTGGACAGTGGGCGTTCCCGAGTTCTCTCTGCTGGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
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| CDS-3UTR CAA 90 bp | GCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTCCGTGGAGCTCCGTCTaGTGCAGGTGGTTAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALPLRLHALFAFTAFTHPPWSSV*CRWLMH Trigger: ATGCATTAACCACCTGCACAAGACGGAGCTCCACGG...AGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | CGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCATCCATCAAAACGCTCTaGTTGCCGCTCGAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RSSRSHCACMRCSRSLRSSIKTL*LPLEST Trigger: TGTGGACTCGAGCGGCAACAAGAGCGTTTTGATGGA...TGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS GCA 90 bp | TCCAACTCCTGGGCCAGACCACCAGAGAGCAGGCGGTGTCTGGAGTaGTCTTCATTCCTCATTCCAGCACTGAGAGCAGAGCACCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNSWARPPESRRCLE*SSFLIPALRAEHLL Trigger: CAGGAGGTGCTCTGCTCTCAGTGCTGGAATGAGGAATGAAGAGCACTCCAGACACCGCCTGCTCTCTGGTGGTCTGGCCCAGGAGTTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
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| CDS GCA 90 bp | ACTGCGCCTGCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTaGTGCACAACAGTAGAGCTGCAGAAGGGGACCTATGGGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TAPACVVRVHCVHAP*CTTVELQKGTYGTL Trigger: CAGAGTCCCATAGGTCCCCTTCTGCAGCTCTACTGTTGTGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589006.1 |
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| CDS GCA 90 bp | TTCTCTCGCCACCTGGAAGACAGACGTGCTTTCACACAGGGAACTTaGGCACACGGCGTGGAACCCACGGCACATTTAGCCCACTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSRHLEDRRAFTQGT*AHGVEPTAHLAHST Trigger: AGTGGAGTGGGCTAAATGTGCCGTGGGTTCCACGCCGTGTGCGCAAGTTCCCTGTGTGAAAGCACGTCTGTCTTCCAGGTGGCGAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS TCA 90 bp | GCACCCTGCTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTaGCCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: APCYGTLSLLTSEAP*PYQRTRRTASLCWL Trigger: CAGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAGCAGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000588852.2 |
||
| CDS GCA 90 bp | TGCTCTTCATTCCTCATTCCAGCACTGAGAGCAGAGCACCTCCTGTaGTCCCCCAAGGAGAGAAGGCGCGGCCTCCATCTTTCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSSFLIPALRAEHLL*SPKERRRGLHLSIT Trigger: AGTGATGGAAAGATGGAGGCCGCGCCTTCTCTCCTTGGGGGAGCACAGGAGGTGCTCTGCTCTCAGTGCTGGAATGAGGAATGAAGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCTGCGCCTGCATGCGTaGTTCGCGTTCACTGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLWLEIALRGQVSDHLGPLRLHA*FAFTAF Trigger: GAACGCAGTGAACGCGAACAACGCATGCAGGCGCAG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGAATGGTAGCGCTCATCCAGGGCGGCCCGCTTGGCTTCCGGCCAATATCTCTGCTGGCTGATTaGCGATCCTGGCTTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KVRMVALIQGGPLGFRPISLLAD*RSWLLE Trigger: TTCCAAAAGCCAGGATCGCAAATCAGCCAGCAGAGA...TATTGGCCGGAAGCCAAGCGGGCCGCCCTGGATGAGCGCTACCATTCTGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGCTCGACTTCCTGACTTaGTGGCTCGAGATCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRLDFLT*WLEIAL Trigger: CAGAGCGATCTCGAGCCACAAAGTCAGGAAGTCGAG...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCGACTTCCGAGGCTCCTaGACCTTATCAAAGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: SVELRLVQVVNAFCGLFCDFRGS*TLSKDT Trigger: CGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTC...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCCGTCACTGTCTCTTTaGTCAGAGGTTTTCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLWLEIALRGQVSDHLGPPSLSL*SEVFFP Trigger: GGGAAAGAAAACCTCTGACAAAAGAGACAGTGACGG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGTTGCGATCCTGGCTTTaGGAAGCTCTCTCTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRLRSWL*EALSLD Trigger: GTCCAAAGAGAGAGCTTCCAAAAGCCAGGATCGCAA...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS CCA 90 bp | TTCATTTCCCCCTCGACTAGCTCTCTACTATCCGACAGGGACTCCTaGAGGTTATCAGCATCATCGTCTTCGACACAATCTGCAACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FISPSTSSLLSDRDS*RLSASSSSTQSATL Trigger: AAGCGTTGCAGATTGTGTCGAAGACGATGATGCTGATAACCTCCAGGAGTCCCTGTCGGATAGTAGAGAGCTAGTCGAGGGGGAAATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000292123.9 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTGGCTCGAGATCGCTCTGAGGGGCCAGGTTTCTGATCATCTTGGTCCTCTTTGGAAAGCCTTTTaGTATCCGAGTCATCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLWLEIALRGQVSDHLGPLWKAF*YPSHLR Trigger: CCGAAGATGACTCGGATACAAAAAGGCTTTCCAAAG...AGGACCAAGATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCACAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACCTCGTTCTCCCATCATaGACCTTGAACCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWDSESLDFRGSLTLSKDLVLPS*TLNLLS Trigger: GGAGAGAAGGTTCAAGGTCAATGATGGGAGAACGAG...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGGTAGATCTGTCACTGTaGCTCGACTTCTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRVDLSL*LDFSFF Trigger: GAAAAAGGAGAAGTCGAGCAACAGTGACAGATCTAC...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCTTTCTCCACGGAGATCATCTTTCCGTGGAGCTCCGTCTTGTGCAGGATCACAGGCACCCCTTaGGATTTATCCATTACTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLAFSTEIIFPWSSVLCRITGTP*DLSITT Trigger: TGTAGTAATGGATAAATCCAAAGGGGTGCCTGTGAT...CCTGCACAAGACGGAGCTCCACGGAAAGATGATCTCCGTGGAGAAAGCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | TCCGTGGAGCTCCGTCTTGTGCAGGTGGTTAATGCATTTTGTGGCCTCTTCTGCCTTTGTCCTCTATCTTaGCTAGACCTCTTTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVELRLVQVVNAFCGLFCLCPLS*LDLFDV Trigger: AACATCAAAGAGGTCTAGCAAAGATAGAGGACAAAG...GCAGAAGAGGCCACAAAATGCATTAACCACCTGCACAAGACGGAGCTCCACGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATATCAAAACGCTCTTGTaGCCGCTCGAGTCCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: LFSPLPSSPFLASSFLSHIKTLL*PLESTF Trigger: GAATGTGGACTCGAGCGGCAACAAGAGCGTTTTGAT...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATCACCTTCATCTTCAATaGCCTTCTTCAGCCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFSPLPSSPFLASSFLSHHLHLQ*PSSAAP Trigger: TGGAGCGGCTGAAGAAGGCAATTGAAGATGAAGGTG...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS-3UTR CAA 90 bp | CTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTTGACCTTATCAAAGGACAGGTTTCTGATCATCTaGGTCCTTACTCTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWDSESLDFRGSLTLSKDRFLII*VLTLFS Trigger: GGAGAAAAGAGTAAGGACCAAGATGATCAGAAACCT...GTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS GCA 90 bp | CAGGGACTCCTGGAGGTTATCAGCATCATCGTCTTCGACACAATCTaGAACGCTTCCATTATCAATTTCTGCTTCATCCAACACACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGLLEVISIIVFDTI*NASIINFCFIQHTD Trigger: ATCAGTGTGTTGGATGAAGCAGAAATTGATAATGGAAGCGTTGCAGATTGTGTCGAAGACGATGATGCTGATAACCTCCAGGAGTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292123.9 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTCTCCACTTCCGTCGTCACCCTTCTTAGCATCATCTTTTCTGTCACATTTGGAAGCTCTCTCTTaGGACCCGGACGTTTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: LFSPLPSSPFLASSFLSHLEALS*DPDVFT Trigger: TGTAAAAACGTCCGGGTCCAAAGAGAGAGCTTCCAA...ATGTGACAGAAAAGATGATGCTAAGAAGGGTGACGACGGAAGTGGAGAAAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS TCA 90 bp | AGAGAGGCATCTGGAACTCTTTCTCTATGTATGATTCAATGCTGTTaGTATTCAAAAAGGCATGAGATACTTTCATCTCACCAATACATT | + |
|
Preference number: 5 (lower is better) Translates to: REASGTLSLCMIQCC*YSKRHEILSSHQYI Trigger: AATGTATTGGTGAGATGAAAGTATCTCATGCCTTTTTGAATATCAACAGCATTGAATCATACATAGAGAAAGAGTTCCAGATGCCTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590485.1 |
||
| CDS TCA 72 bp | CACTCGCAGGTCGCTGAGGCGCCGCGTCCCGGTCTCTaGCGAGGCGGAGCTCAGAGCCGCCGCGCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HSQVAEAPRPGL*RGGAQSRRARR Trigger: GCGGCGGGCGCGGCGGCTCTGAGCTCCGCCTCGTCAGAGACCGGGACGCGGCGCCTCAGCGACCTGCGAGTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000586934.5 ENST00000588852.2 ENST00000589863.5 ENST00000591666.5 ENST00000592224.5 |
||
| CDS GCA 72 bp | GGGAACCGCTCCAGTCGCCCCAGCGCGCCTCGCTTCTaGGCAGGCGCACCAAGCGTAGGTTCTAGTATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GNRSSRPSAPRF*AGAPSVGSSIP Trigger: CGGGATACTAGAACCTACGCTTGGTGCGCCTGCGCAGAAGCGAGGCGCGCTGGGGCGACTGGAGCGGTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589863.5 |
||
| CDS CCA 72 bp | CTAGGCCTGACAGAGTCTCCGCCATTCCAGGGACCCTaGCTCCGCCGCCCACTTTCCACAGAACCGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLTESPPFQGP*LRRPLSTEPGR Trigger: CCGGCCCGGTTCTGTGGAAAGTGGGCGGCGGAGCCAGGGTCCCTGGAATGGCGGAGACTCTGTCAGGCCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000586934.5 ENST00000588852.2 ENST00000589863.5 ENST00000591666.5 ENST00000592224.5 |
||
| CDS CCA 72 bp | GAACCGGGCCGGTTTTATCAGGCTCCTAGCACAAAATaGCGCCGCCTGCGAGGGAACCGCTCCAGTCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EPGRFYQAPSTK*RRLRGNRSSRP Trigger: GGGGCGACTGGAGCGGTTCCCTCGCAGGCGGCGCCATTTTGTGCTAGGAGCCTGATAAAACCGGCCCGGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000292123.9 ENST00000588852.2 ENST00000589863.5 ENST00000591666.5 |
||
| CDS CAA 72 bp | CTCACGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTaGTTCGCGTTCACTGCGTTCACGCACCCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTLLALPLRLHA*FAFTAFTHPAA Trigger: TGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCGTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589006.1 |
||
| CDS CAA 72 bp | CTCACGCTCCTCGCGCTCCCACTGCGCCTGCATGCGTaGTTCGCGTTCACTGCGTTCACGCACCCTGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: LTLLALPLRLHA*FAFTAFTHPAM Trigger: CATAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGCGCGAGGAGCGTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000588852.2 |
||
| CDS GCA 72 bp | GCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTaGGTTCACGCACCCTGCTATGGGACTCTGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: APTAPACVVRVH*VHAPCYGTLSL Trigger: GAGACTCAGAGTCCCATAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000588852.2 |
||
| CDS GCA 72 bp | TTCTGGAGAGTGAATCCCTCTGTGTTTCCCACCCTGTaGCCACATCCCAGCGACTTGCGGGCCCCCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FWRVNPSVFPTL*PHPSDLRAPLW Trigger: CCACAAGGGGGCCCGCAAGTCGCTGGGATGTGGGCACAGGGTGGGAAACACAGAGGGATTCACTCTCCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591991.1 |
||
| CDS GCA 72 bp | GCTCCCACTGCGCCTGCATGCGTTGTTCGCGTTCACTaGGTTCACGCACCCTGCTGCACAACAGTAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APTAPACVVRVH*VHAPCCTTVEL Trigger: CAGCTCTACTGTTGTGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGCAGGCGCAGTGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589006.1 |
||
| CDS GCA 72 bp | CCGGACATGCTTCTCTCGCCACCTGGAAGACAGACGTaGTTTCACACAGGGAACTTGCGCACACGGCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PDMLLSPPGRQT*FHTGNLRTRRG Trigger: TCCACGCCGTGTGCGCAAGTTCCCTGTGTGAAAGCACGTCTGTCTTCCAGGTGGCGAGAGAAGCATGTCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS CAA 90 bp | CTTCTCTCGCCACCTGGAAGACAGACGTGCTTTCACACAGGGAACTaGCGCACACGGCGTGGAACCCACGGCACATTTAGCCCACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPPGRQTCFHTGN*RTRRGTHGTFSPLH Trigger: GTGGAGTGGGCTAAATGTGCCGTGGGTTCCACGCCGTGTGCGCAAGTTCCCTGTGTGAAAGCACGTCTGTCTTCCAGGTGGCGAGAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS GCA 72 bp | TGGGCCAGACCACCAGAGAGCAGGCGGTGTCTGGAGTaGTCTTCATTCCTCATTCCAGCACTGAGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WARPPESRRCLE*SSFLIPALRAE Trigger: CTCTGCTCTCAGTGCTGGAATGAGGAATGAAGAGCACTCCAGACACCGCCTGCTCTCTGGTGGTCTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS GCA 72 bp | CACCTGGAAGACAGACGTGCTTTCACACAGGGAACTTaGGCACACGGCGTGGAACCCACGGCACATTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLEDRRAFTQGT*AHGVEPTAHLA Trigger: GGCTAAATGTGCCGTGGGTTCCACGCCGTGTGCGCAAGTTCCCTGTGTGAAAGCACGTCTGTCTTCCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS GCA 72 bp | TGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTGCTaGACAACAGTAGAGCTGCAGAAGGGGACCTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVVRVHCVHAPC*TTVELQKGTYG Trigger: CCCATAGGTCCCCTTCTGCAGCTCTACTGTTGTGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589006.1 |
||
| CDS CCA 72 bp | CTTCCCAGCAGAGCCAGGTCACATCCCAAGGTTCCCTaGCACTGTTGCACATGTGTGGTGAGTGTGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LPSRARSHPKVP*HCCTCVVSVAH Trigger: GTGTGCCACACTCACCACACATGTGCAACAGTGCCAGGGAACCTTGGGATGTGACCTGGCTCTGCTGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586281.1 |
||
| CDS CAA 72 bp | CCACCTGGAAGACAGACGTGCTTTCACACAGGGAACTaGCGCACACGGCGTGGAACCCACGGCACATTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGRQTCFHTGN*RTRRGTHGTFS Trigger: GCTAAATGTGCCGTGGGTTCCACGCCGTGTGCGCAAGTTCCCTGTGTGAAAGCACGTCTGTCTTCCAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591991.1 ENST00000592555.1 |
||
| CDS CAA 90 bp | CGCACCCTGCTATGGGACTCTGAGTCTCTTGACTTCCGAGGCTCCTaGACCTTATCAAAGGACACGACGGACCGCTTCTCTCTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTLLWDSESLDFRGS*TLSKDTTDRFSLLA Trigger: AGCCAGCAGAGAGAAGCGGTCCGTCGTGTCCTTTGATAAGGTCAAGGAGCCTCGGAAGTCAAGAGACTCAGAGTCCCATAGCAGGGTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000588852.2 |
||
| CDS GCA 72 bp | GCATGCGTTGTTCGCGTTCACTGCGTTCACGCACCCTaGTGCACAACAGTAGAGCTGCAGAAGGGGACCTAT | + |
|
Preference number: 6 (lower is better) Translates to: ACVVRVHCVHAP*CTTVELQKGTY Trigger: ATAGGTCCCCTTCTGCAGCTCTACTGTTGTGCAGCAGGGTGCGTGAACGCAGTGAACGCGAACAACGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589006.1 |
||
| CDS TCA 72 bp | CCCAGTCACGTCTGCCCCTTGAAAGAGAGACATCTCTaGTTTGGATTGCCCCCATCTCTGGCTCTTGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSHVCPLKERHL*FGLPPSLALVL Trigger: TAGCACAAGAGCCAGAGATGGGGGCAATCCAAATCAGAGATGTCTCTCTTTCAAGGGGCAGACGTGACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591991.1 |
||
| CDS CCA 72 bp | ATCTCTGGCTCTTGTGCTAATAACTGTGGCGGCTTCTaGAGAGTGAATCCCTCTGTGTTTCCCACCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISGSCANNCGGF*RVNPSVFPTLC Trigger: GCACAGGGTGGGAAACACAGAGGGATTCACTCTCCAGAAGCCGCCACAGTTATTAGCACAAGAGCCAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591991.1 |
||
| CDS CCA 72 bp | CCCTCGACTAGCTCTCTACTATCCGACAGGGACTCCTaGAGGTTATCAGCATCATCGTCTTCGACACAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PSTSSLLSDRDS*RLSASSSSTQS Trigger: AGATTGTGTCGAAGACGATGATGCTGATAACCTCCAGGAGTCCCTGTCGGATAGTAGAGAGCTAGTCGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292123.9 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS CAA 72 bp | GCTTCAGACTTACCTGTCCTTCTCGTTCTCCCATCATaGACCTTGAACCTTCTCTCCTGTCCACCGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASDLPVLLVLPS*TLNLLSCPPSG Trigger: ACCACTCGGTGGACAGGAGAGAAGGTTCAAGGTCAATGATGGGAGAACGAGAAGGACAGGTAAGTCTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586281.1 |
||
| CDS CAA 72 bp | AACTGCTGCGACCCTTTTCCTCTTTGGAAAGCCTTTTaGTATCCGAGTCATCTTCGGGAGAACTGGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NCCDPFPLWKAF*YPSHLRENWLQ Trigger: CTGGAGCCAGTTCTCCCGAAGATGACTCGGATACAAAAAGGCTTTCCAAAGAGGAAAAGGGTCGCAGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586934.5 |
||
| CDS CCA 72 bp | TCACGTCTGCCCCTTGAAAGAGAGACATCTCTGATTTaGATTGCCCCCATCTCTGGCTCTTGTGCTAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRLPLERETSLI*IAPISGSCANN Trigger: GTTATTAGCACAAGAGCCAGAGATGGGGGCAATCCAAATCAGAGATGTCTCTCTTTCAAGGGGCAGACGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591991.1 |
||
| CDS CAA 90 bp | TCTTCTTCTGGTTTGCGCCCTTTGCTAGACCTCTTTGATGTTTTCTaGTTTCCCTCGGAGGTAATTTCAATTTCGTCAGGATTACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSGLRPLLDLFDVF*FPSEVISISSGLPP Trigger: AGGTGGTAATCCTGACGAAATTGAAATTACCTCCGAGGGAAACAAGAAAACATCAAAGAGGTCTAGCAAAGGGCGCAAACCAGAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS TCA 72 bp | CTCTTCTTCTGGTTTGCGCCCTTTGCTAGACCTCTTTaGTGTTTTCTTGTTTCCCTCGGAGGTAATTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LFFWFAPFARPL*CFLVSLGGNFN Trigger: ATTGAAATTACCTCCGAGGGAAACAAGAAAACATCAAAGAGGTCTAGCAAAGGGCGCAAACCAGAAGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000292123.9 ENST00000454510.5 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS GCA 72 bp | CTGGAGGTTATCAGCATCATCGTCTTCGACACAATCTaGAACGCTTCCATTATCAATTTCTGCTTCATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LEVISIIVFDTI*NASIINFCFIQ Trigger: TTGGATGAAGCAGAAATTGATAATGGAAGCGTTGCAGATTGTGTCGAAGACGATGATGCTGATAACCTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292123.9 ENST00000586934.5 ENST00000588852.2 ENST00000592224.5 |
||
| CDS TCA 72 bp | TCTGGAACTCTTTCTCTATGTATGATTCAATGCTGTTaGTATTCAAAAAGGCATGAGATACTTTCATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGTLSLCMIQCC*YSKRHEILSSH Trigger: GTGAGATGAAAGTATCTCATGCCTTTTTGAATATCAACAGCATTGAATCATACATAGAGAAAGAGTTCCAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590485.1 |
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