RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SACM1L (Homo sapiens)

Ensembl gene IDs: ENSG00000211456

Ensembl transcript IDs: ENST00000389061.10, ENST00000418611.5, ENST00000433336.1, ENST00000438671.3, ENST00000441228.5, ENST00000445499.2, ENST00000455997.5, ENST00000463237.5, ENST00000463347.5, ENST00000463659.1, ENST00000464524.5, ENST00000471207.1, ENST00000478586.3, ENST00000485311.1, ENST00000672477.1, ENST00000672858.2

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAAACTCTGGATCACATTGGTTCTATCTAGACAATCCATGCAATTaGTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCAG +
Preference number: 1 (lower is better)
Translates to: TNSGSHWFYLDNPCN*FGTRLPGLPPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 90 bp GAGCTAACAAACTCTGGATCACATTGGTTCTATCTAGACAATCCATaGAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGC +
Preference number: 1 (lower is better)
Translates to: ELTNSGSHWFYLDNP*NCFGTRLPGLPPPG
Trigger: GCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 90 bp ACATCAAGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTaGAATATGAAATCTAGAACAAGACCCTCTCAGAGGCCTGCGTGT +
Preference number: 1 (lower is better)
Translates to: TSRVPCVKKQLLPSK*NMKSRTRPSQRPAC
Trigger: ACACGCAGGCCTCTGAGAGGGTCTTGTTCTAGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCTTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CCA 90 bp GTTGGGCCTGAAGTGAACGACGAGCTAACAAACTCTGGATCACATTaGTTCTATCTAGACAATCCATGCAATTGCTTCGGAACACGCCTT +
Preference number: 1 (lower is better)
Translates to: VGPEVNDELTNSGSH*FYLDNPCNCFGTRL
Trigger: AAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCGTCGTTCACTTCAGGCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR TCA 90 bp GCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGG +
Preference number: 1 (lower is better)
Translates to: AQDVLLDKGIKKTLG*CGKRVSKDSSSAQW
Trigger: CCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR GCA 90 bp CTCATCATTCCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATT +
Preference number: 1 (lower is better)
Translates to: LIIPLPKEDTIVANV*SSGFSEPFWLIRLI
Trigger: AATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGGAATGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CCA 90 bp ATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCAC +
Preference number: 1 (lower is better)
Translates to: MEHKMCFWIKALKRP*ADVESGSVKTPVLH
Trigger: GTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CCA 90 bp ATGCCTTTGGAAACCGTCCATGTGATTTGCTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAGGTTTGGTCTTTGGGACCAGAAAAC +
Preference number: 1 (lower is better)
Translates to: MPLETVHVICYFADL*QWFVLEVWSLGPEN
Trigger: GTTTTCTGGTCCCAAAGACCAAACCTCAAGTACAAACCACTGCCACAGATCAGCAAAGTAGCAAATCACATGGACGGTTTCCAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CCA 90 bp AGATCAATTCTGTCATCATCCTGCATGGAGCACAAGATGTGCTTTTaGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGG +
Preference number: 1 (lower is better)
Translates to: RSILSSSCMEHKMCF*IKALKRPWADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCAGGATGATGACAGAATTGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CCA 90 bp ACTTTGCTGATCTGTGGCAGTGGTTTGTACTTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATTGATCCTCGAGTCTGTACAAACGAA +
Preference number: 1 (lower is better)
Translates to: TLLICGSGLYLRFGL*DQKTGIDPRVCTNE
Trigger: TTCGTTTGTACAGACTCGAGGATCAATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAAGTACAAACCACTGCCACAGATCAGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 90 bp GCTCCCATTGTAGTGCACAATTTGTTCTGTTTCTACAAAGTTAGCTaGATGGCCTTCCGAATCAATTCCTCTTACATAATAGCGCACACC +
Preference number: 1 (lower is better)
Translates to: APIVVHNLFCFYKVS*MAFRINSSYIIAHT
Trigger: GGTGTGCGCTATTATGTAAGAGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAAACAGAACAAATTGTGCACTACAATGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR TCA 90 bp TTGTCTAAATCCATCGGAAAAGTTGTTCTTATAATATCGTATCATTaGGTTCCAGCCATCCATTATAAGTCCCAAATGAGTTCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: LSKSIGKVVLIISYH*VPAIHYKSQMSSLS
Trigger: GGAAAGAGAACTCATTTGGGACTTATAATGGATGGCTGGAACTCAATGATACGATATTATAAGAACAACTTTTCCGATGGATTTAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CCA 90 bp GCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCAGAGTCAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: AIASEHAFLVCHHLASRVKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...GACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR TCA 90 bp ATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCCCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 2 (lower is better)
Translates to: IHAIASEHAFLVCHHLASPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...GCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR TCA 90 bp TGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATAACAGCGCACACCAGCTCTaGAACAGCTCCTCCTCGAGA +
Preference number: 2 (lower is better)
Translates to: CLLKWLLRALLVNQIDYNSAHQL*NSSSSR
Trigger: TCTCGAGGAGGAGCTGTTTCAGAGCTGGTGTGCGCT...GTTATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CAA 90 bp AACAAACTCTGGATCACATTGGTTCTATCTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: NKLWITLVLSRQSMQ*LRNTPSWFATTWPA
Trigger: TGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR TCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR TCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAGCAGTGGTTTGTACTTaGGGTTTGGTCTTTGGGACC +
Preference number: 2 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTAVVCT*GLVFGT
Trigger: GGTCCCAAAGACCAAACCTCAAGTACAAACCACTGC...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CAA 90 bp TCCAGTTCTGGTAAAGTCAGTCTTCAAGGCACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGCGTTGTCAGCCCAGGCATTTTTGTA +
Preference number: 2 (lower is better)
Translates to: SSSGKVSLQGTSSRI*LGTSICVVSPGIFV
Trigger: TACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTTTACCAGAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR GCA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCA +
Preference number: 2 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALVLDSR*KVWVKS
Trigger: TGATTTGACCCATACTTTGCAGCGGCTATCCAACAC...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACAGACAATCCATGCAATTaGTTCGGAACACGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTDNPCN*FGTRLP
Trigger: AGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTC...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCCCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 2 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
3UTR-3UTR CCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 2 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR TCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: MCFWIKALKRPWADVESGKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR GCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 2 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR GCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CCA 90 bp ATCATTCCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTGCTCAAGTGGCGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 2 (lower is better)
Translates to: IIPLPKEDTIVANVCSSGALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...GCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGGAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CCA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGTGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CCA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTCACACCTAAACTGCTaGTGCACTGGCAGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYSHLNC*CTGSSS
Trigger: GCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGA...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CAA 90 bp TATCTAGACAATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAGAGTCCACTAGAAAATAACTTAATT +
Preference number: 2 (lower is better)
Translates to: YLDNPCNCFGTRLPG*PPPGQQSPLENNLI
Trigger: AATTAAGTTATTTTCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR TCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: HSLQSSHISSSDLVFVVAKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR GCA 90 bp TGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 2 (lower is better)
Translates to: CTMESSKPSRFPQIQIQSLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...AGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: MCFWIKALKRPWADVESGSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACATGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCATGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTGTAGCTGACCAGTCATaGGCATCTTCCACATTGGGA +
Preference number: 2 (lower is better)
Translates to: HSLQSSHISSSDLVFVVAVADQS*ASSTLG
Trigger: TCCCAATGTGGAAGATGCCCATGACTGGTCAGCTAC...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR TCA 90 bp AAATGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATTTCCATACAAACCGCTaGTCTGCCCTTTCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: KCLLKWLLRALLVNQIDYFHTNR*SALSKR
Trigger: TCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAA...ATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTTCATCACACCTAAACTaGTGGTGCACTGGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: HSLQSSHISSSDLVFVVASSHLN*WCTGSS
Trigger: TGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGA...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGAAACTGCTGGTGCACTaGCAGTTCAAGCTGATTAAA +
Preference number: 2 (lower is better)
Translates to: MCFWIKALKRPWADVESGKLLVH*QFKLIK
Trigger: TTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCAGTTGGTCCTTGATTTaGAGTACTATAACTACCTGG +
Preference number: 2 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVSWSLI*STITTW
Trigger: CCAGGTAGTTATAGTACTCCAAATCAAGGACCAACT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACATTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 2 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CAA 90 bp TCTGCCCTTTCCAAGAGACTCATTTCTTGGAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTATGGGTCAAATCATATGTTGTTGAA +
Preference number: 2 (lower is better)
Translates to: SALSKRLISWNSGLV*DSRCKVWVKSYVVE
Trigger: TTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTATCCAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTGGAAAGGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CAA 90 bp TCGAGTCTGTACAAACGAAGCTTTGCTCCCATTGTAGTGCACAATTaGTTCTGTTTCTACAAAGTTAGCTGCATGGCCTTCCGAATCAAT +
Preference number: 2 (lower is better)
Translates to: SSLYKRSFAPIVVHN*FCFYKVSCMAFRIN
Trigger: ATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAAACAGAACAAATTGTGCACTACAATGGGAGCAAAGCTTCGTTTGTACAGACTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR TCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: KSMPANSDRFYNDNNETEKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR TCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR TCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTTCCTCTTTCCTATCATaGAGTCACAGACTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: HSLQSSHISSSDLVFVVASSFLS*SHRLSH
Trigger: ATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGA...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR TCA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTTCCTCTTTCCTATCATaGAGTCACAGACTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAISSFLS*SHRLSH
Trigger: ATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGA...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
3UTR-3UTR GCA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR GCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: NTLILVHSLQSSHISSSDKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
3UTR-3UTR CCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATATGTGTGGAAAAGTATaGCTGCTAATAGTGACCGCT +
Preference number: 2 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDMCGKV*LLIVTA
Trigger: AGCGGTCACTATTAGCAGGCATACTTTTCCACACAT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR GCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 2 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFTVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATCCACATTCAAGACATaGTTTAGCATCGCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: HKMCFWIKALKRPWADVESTFKT*FSIARK
Trigger: CTTCCTAGCGATGCTAAACCATGTCTTGAATGTGGA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CCA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 2 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 2 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: THSLIANKILDRVKNIKSSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTAGTTGGTCCTTGATTTaGAGTACTATAACTACCTGG +
Preference number: 2 (lower is better)
Translates to: RSNTLILVHSLQSSHISSSWSLI*STITTW
Trigger: CCAGGTAGTTATAGTACTCCAAATCAAGGACCAACT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 2 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFTKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR GCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTATGTGTGGAAAAGTATaGCTGCTAATAGTGACCGCT +
Preference number: 2 (lower is better)
Translates to: THSLIANKILDRVKNIKSMCGKV*LLIVTA
Trigger: AGCGGTCACTATTAGCAGGCATACTTTTCCACACAT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR GCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTACATCAAGAGTACCATaGGTGAAAAAGCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: THSLIANKILDRVKNIKSTSRVP*VKKQLL
Trigger: TAACAGCTGCTTTTTCACGCATGGTACTCTTGATGT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGAAGTCCAAAGATGTGTaGAAAAGTATGCCTGCTAAT +
Preference number: 2 (lower is better)
Translates to: KSMPANSDRFYNDNNETEKSKDV*KSMPAN
Trigger: ATTAGCAGGCATACTTTTCCACACATCTTTGGACTT...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CAA 90 bp CTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTaGATGTCTGTAAGAGACTTACATTTTATAAACACAGTTAGCTTA +
Preference number: 2 (lower is better)
Translates to: LLFPIMKSQTVSSNY*MSVRDLHFINTVSL
Trigger: TAAGCTAACTGTGTTTATAAAATGTAAGTCTCTTACAGACATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR GCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTCTGTTACCCTCCAAGTaGAATATGAAATCTAGAACA +
Preference number: 2 (lower is better)
Translates to: THSLIANKILDRVKNIKSLLPSK*NMKSRT
Trigger: TGTTCTAGATTTCATATTGCACTTGGAGGGTAACAG...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CCA 72 bp AGACAATCCATGCAATTGCTTCGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCAGCAGAGTCCACTAGA +
Preference number: 3 (lower is better)
Translates to: RQSMQLLRNTPS*FATTWPAESTR
Trigger: TCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 72 bp GTAAAGTCAGTCTTCAAGGCACCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCGTTGTCAGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: VKSVFKAPVPAY*LAQAFALSAQA
Trigger: TGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CAA 90 bp GAGCTAACAAACTCTGGATCACATTGGTTCTATCTAGACAATCCATGCAATTGCACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: ELTNSGSHWFYLDNPCNCTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...GCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 72 bp CCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATC +
Preference number: 3 (lower is better)
Translates to: PLPKEDTIVANV*SSGFSEPFWLI
Trigger: GATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CCA 72 bp AGTCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTaGCACAAGCATTTGCGTTGTCAGCCCAGGCATTTT +
Preference number: 3 (lower is better)
Translates to: SQSSRHQFPHIA*HKHLRCQPRHF
Trigger: AAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR GCA 72 bp GGATCACATTGGTTCTATCTAGACAATCCATGCAATTaGTTCGGAACACGCCTTCCTGGTTTGCCACCACCT +
Preference number: 3 (lower is better)
Translates to: GSHWFYLDNPCN*FGTRLPGLPPP
Trigger: AGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 72 bp GGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATTTTTGTAAATCTTCTC +
Preference number: 3 (lower is better)
Translates to: GTSSRILLGTSI*VVSPGIFVNLL
Trigger: GAGAAGATTTACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR CCA 72 bp GGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCCGCTTTCCACAAATAC +
Preference number: 3 (lower is better)
Translates to: GKRVSKDSSSAQ*NLPSQAAFHKY
Trigger: GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CCA 72 bp CTGAATTCTCTCATCACACCTAAACTGCTGGTGCACTaGCAGTTCAAGCTGATTAAAGTCATGAGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: LNSLITPKLLVH*QFKLIKVMRQP
Trigger: GGGCTGCCTCATGACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGAATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CAA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGTTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 3 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR-3UTR CAA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCAT +
Preference number: 3 (lower is better)
Translates to: NTLILVHSLQSSHISSSDAWHKH*RCQPRH
Trigger: ATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGC...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
3UTR-3UTR CAA 90 bp ATCATTCCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTGCTCAAGTGGCAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 3 (lower is better)
Translates to: IIPLPKEDTIVANVCSSGNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...GCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR GCA 72 bp GTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTaGAATATGAAATCTAGAACAAGACCCTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: VPCVKKQLLPSK*NMKSRTRPSQR
Trigger: CCTCTGAGAGGGTCTTGTTCTAGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR GCA 72 bp AACTCTGGATCACATTGGTTCTATCTAGACAATCCATaGAATTGCTTCGGAACACGCCTTCCTGGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: NSGSHWFYLDNP*NCFGTRLPGLP
Trigger: TGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CCA 72 bp ATCTGTGGCAGTGGTTTGTACTTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATTGATCCTCGAGTCTGT +
Preference number: 3 (lower is better)
Translates to: ICGSGLYLRFGL*DQKTGIDPRVC
Trigger: ACAGACTCGAGGATCAATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAAGTACAAACCACTGCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CAA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 3 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYTSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR TCA 72 bp GTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: VLLDKGIKKTLG*CGKRVSKDSSS
Trigger: AGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR-3UTR CAA 90 bp TGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTCCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: CTMESSKPSRFPQIQIQSPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...AGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CAA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 3 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR GCA 72 bp CAAGGCAGTAACATCAGATCAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGCTTTTGGATAAAGGCA +
Preference number: 3 (lower is better)
Translates to: QGSNIRSILSSS*MEHKMCFWIKA
Trigger: TGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCAGGATGATGACAGAATTGATCTGATGTTACTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CCA 72 bp AAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCA +
Preference number: 3 (lower is better)
Translates to: KMCFWIKALKRP*ADVESGSVKTP
Trigger: TGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CCA 72 bp GAAGTGAACGACGAGCTAACAAACTCTGGATCACATTaGTTCTATCTAGACAATCCATGCAATTGCTTCGGA +
Preference number: 3 (lower is better)
Translates to: EVNDELTNSGSH*FYLDNPCNCFG
Trigger: TCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCGTCGTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CAA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCCGTTTAAGTTGGTCCTaGATTTGGAGTACTATAACT +
Preference number: 3 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVRLSWS*IWSTIT
Trigger: AGTTATAGTACTCCAAATCAAGGACCAACTTAAACG...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR GCA 72 bp CAGGTATTGATCCTCGAGTCTGTACAAACGAAGCTTTaGTCCCATTGTAGTGCACAATTTGTTCTGTTTCTA +
Preference number: 3 (lower is better)
Translates to: QVLILESVQTKL*SHCSAQFVLFL
Trigger: TAGAAACAGAACAAATTGTGCACTACAATGGGAGCAAAGCTTCGTTTGTACAGACTCGAGGATCAATACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CAA 90 bp GAGCTAACAAACTCTGGATCACATTGGTTCTATCTAGACAATCCATGCAATTGCACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 3 (lower is better)
Translates to: ELTNSGSHWFYLDNPCNCTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...GCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR-3UTR CAA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATTTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 3 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR TCA 72 bp ATCATTGAGTTCCAGCCATCCATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: IIEFQPSIISPK*VLFPVLVKSVF
Trigger: GAAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGATGGCTGGAACTCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR GCA 72 bp ATTTCTTGGAATTCAGGACTAGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCATATGTTGTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: ISWNSGLVLDSR*KVWVKSYVVEK
Trigger: CTTTTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTATCCAACACTAGTCCTGAATTCCAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
3UTR CCA 72 bp TACAAATTCAGTCTATCTTTTCTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTTTGCCATTGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: YKFSLSFLSGPV*EHRQNLCHCKE
Trigger: TTCTTTACAATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
3UTR TCA 72 bp TCCATCGGAAAAGTTGTTCTTATAATATCGTATCATTaGGTTCCAGCCATCCATTATAAGTCCCAAATGAGT +
Preference number: 3 (lower is better)
Translates to: SIGKVVLIISYH*VPAIHYKSQMS
Trigger: ACTCATTTGGGACTTATAATGGATGGCTGGAACTCAATGATACGATATTATAAGAACAACTTTTCCGATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp GCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCAGAGTCCGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AIASEHAFLVCHHLASRVRNTPS*FATTWP
Trigger: TGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCG...GACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCCCGACCCCGGCTCGGTaGGGGCCAGTCGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVPTPAR*GPVGSF
Trigger: GAAGCTGCCGACTGGCCCCCACCGAGCCGGGGTCGG...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAGCCGACGCGGCGGGTTaGAGTGCGACGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTADAAG*SATKSA
Trigger: GGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGC...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCGCGCCTCAGGCCTCTaGCCCGTGGGACTCACAGCT +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFRASGL*PVGLTA
Trigger: AGCTGTGAGTCCCACGGGCCAGAGGCCTGAGGCGCG...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCAGAGTCAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AIASEHAFLVCHHLASRVKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...GACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTCTACCGGTCACCCTaGCACAGCGGCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVLYRSP*HSGRSS
Trigger: GGAGCTGCGGCCGCTGTGCCAGGGTGACCGGTAGAG...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCCTCTACCGGTCACCCTaGCACAGCGGCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVLYRSP*HSGRSS
Trigger: GGAGCTGCGGCCGCTGTGCCAGGGTGACCGGTAGAG...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCATTCTCTCTTCAGCCGTaGGCGCTGGGGCCGAGCACG +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSFSLQP*ALGPST
Trigger: CGTGCTCGGCCCCAGCGCCCACGGCTGAAGAGAGAA...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR TCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAAGCGCACACCAGCTCTaGAACAGCTCCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGSAHQL*NSSSSR
Trigger: TCTCGAGGAGGAGCTGTTTCAGAGCTGGTGTGCGCT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACACGACGAAGAGCGCCGTaGCGAAGCCGCTGCGGATTG +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTRRRAP*RSRCGL
Trigger: CAATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCG...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR TCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACAAGAGGCCGCGCCGGCTaGGGAAAACCGGTAAATGCG +
Preference number: 4 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTRGRAG*GKPVNA
Trigger: CGCATTTACCGGTTTTCCTCAGCCGGCGCGGCCTCT...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATCCGCCGTCGCCATCCTaGACAACCACCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNPPSPS*TTTSFL
Trigger: AAGGAAGGAGGTGGTTGTGCAGGATGGCGACGGCGG...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATCACGCCTTCCTGGTTTaGCACCACCTGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNHAFLV*HHLASR
Trigger: TCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTG...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGAGAGCACGCGAGAGATaGCGCCGACGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGRARER*RRRGGL
Trigger: CAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000455997.5
CDS-3UTR CCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCACTCTACCGGTCACCCTaGCACAGCGGCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSLYRSP*HSGRSS
Trigger: GGAGCTGCGGCCGCTGTGCCAGGGTGACCGGTAGAG...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAGGAAGGGCAAACCGATaGACCTCTGGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGGRANR*TSGCAE
Trigger: TTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCC...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATAGCGCACACCAGCTCTaGAACAGCTCCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNSAHQL*NSSSSR
Trigger: TCTCGAGGAGGAGCTGTTTCAGAGCTGGTGTGCGCT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCCGCCGTCGCCATCCTaGACAACCACCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFPPSPS*TTTSFL
Trigger: AAGGAAGGAGGTGGTTGTGCAGGATGGCGACGGCGG...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACCCGCCGTCGCCATCCTaGACAACCACCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYPPSPS*TTTSFL
Trigger: AAGGAAGGAGGTGGTTGTGCAGGATGGCGACGGCGG...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCCCGCCGTCGCCATCCTaGACAACCACCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTPPSPS*TTTSFL
Trigger: AAGGAAGGAGGTGGTTGTGCAGGATGGCGACGGCGG...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCACACGCCTTCCTGGTTTaGCACCACCTGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSHAFLV*HHLASR
Trigger: TCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTG...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTAGAGCACGCGAGAGATaGCGCCGACGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: CTMESSKPSRFPQIQIQSRARER*RRRGGL
Trigger: CAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCT...AGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKRNTPS*FATTWP
Trigger: TGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCG...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
3UTR CAA 72 bp GGTAAAGTCAGTCTTCAAGGCACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGCGTTGTCAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKVSLQGTSSRI*LGTSICVVSPG
Trigger: GCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTCGCGGCGGGTTGGAGTaGGACGAAGAGCGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSRGGLE*DEERRD
Trigger: GTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCG...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAACGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQRNTPS*FATTWP
Trigger: TGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCG...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCCTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTT +
Preference number: 4 (lower is better)
Translates to: IHAIASEHAFLVCHHLASLSGPV*EHRQNL
Trigger: AAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAG...GCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATCTGGTTCCCGGCCTATaGCTACTCGGGCGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNLVPGL*LLGRGL
Trigger: TAGGCCTCGCCCGAGTAGCCATAGGCCGGGAACCAG...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR TCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAGGAAGGGCAAACCGATaGACCTCTGGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSGRANR*TSGCAE
Trigger: TTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCC...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACGGAAGGGCAAACCGATaGACCTCTGGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYGRANR*TSGCAE
Trigger: TTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCC...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAGCGCACACCAGCTCTaGAACAGCTCCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTSAHQL*NSSSSR
Trigger: TCTCGAGGAGGAGCTGTTTCAGAGCTGGTGTGCGCT...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAAGCGCACACCAGCTCTaGAACAGCTCCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKSAHQL*NSSSSR
Trigger: TCTCGAGGAGGAGCTGTTTCAGAGCTGGTGTGCGCT...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATCCGCCGTCGCCATCCTaGACAACCACCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNPPSPS*TTTSFL
Trigger: AAGGAAGGAGGTGGTTGTGCAGGATGGCGACGGCGG...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCACACGCCTTCCTGGTTTaGCACCACCTGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSHAFLV*HHLASR
Trigger: TCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTG...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGCACGCCTTCCTGGTTTaGCACCACCTGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKHAFLV*HHLASR
Trigger: TCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTG...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAAGTGGGGACAAGCGTaGCCTGAAGGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVKWGQA*PEGPHH
Trigger: ATGATGCGGCCCTTCAGGGCACGCTTGTCCCCACTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGTGGTTTGCCACCACCTaGCCAGCAGAGTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKWFATT*PAESTR
Trigger: TCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCA...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000672477.1
3UTR CAA 72 bp AATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAGAGTCCACTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NPCNCFGTRLPG*PPPGQQSPLEN
Trigger: ATTTTCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR GCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCACGCCTTCCTGGTTTaGCACCACCTGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTHAFLV*HHLASR
Trigger: TCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATCCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGATCATCACACCTAAACTaGTGGTGCACTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGSSHLN*WCTGSS
Trigger: TGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGA...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAGGAAAACCGGTAAATaGGAGGAGCTCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYRKTGK*EELPHP
Trigger: AGGGTGTGGGAGCTCCTCGCATTTACCGGTTTTCCT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCTGGTTTGCCACCACCTaGCCAGCAGAGTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVWFATT*PAESTR
Trigger: TCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCA...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389061.10
ENST00000672477.1
CDS-3UTR CCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATGGTTTGCCACCACCTaGCCAGCAGAGTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKWFATT*PAESTR
Trigger: TCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCA...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTRNTPS*FATTWP
Trigger: TGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAAGGCCGGCGAGCCGCTaGTTCCCGGCCTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKRPASR*FPAYGY
Trigger: GTAGCCATAGGCCGGGAACCAGCGGCTCGCCGGCCT...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTTGGGGCCGAGCACGGTaGAGAAAGGCCGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSWGRAR*RKAGEP
Trigger: CGGCTCGCCGGCCTTTCTCCACCGTGCTCGGCCCCA...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455997.5
3UTR CAA 72 bp AAGTCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTGTCAGCCCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: KSVFKAPVPAYC*AQAFALSAQAF
Trigger: AAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGGGAAGGGCAAACCGATaGACCTCTGGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGGRANR*TSGCAE
Trigger: TTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCC...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCACCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTCATCACACCTAAACTaGTGGTGCACTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNSSHLN*WCTGSS
Trigger: TGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATCGGAACACGCCTTCCTaGTTTGCCACCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDRNTPS*FATTWP
Trigger: TGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCG...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCGTAGCTGACCAGTCATaGGCATCTTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFVADQS*ASSTLG
Trigger: TCCCAATGTGGAAGATGCCCATGACTGGTCAGCTAC...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CAA 72 bp TGGATCACATTGGTTCTATCTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCCTGGTTTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: WITLVLSRQSMQ*LRNTPSWFATT
Trigger: GGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR TCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNWSCDS*RRNIFL
Trigger: AAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACTTCCATACAAACCGCTaGTCTGCCCTTTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYFHTNR*SALSKR
Trigger: TCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAA...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGGAAGGGCAAACCGATaGACCTCTGGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAGRANR*TSGCAE
Trigger: TTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCC...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGGATTTGCTACTTTGCTaGTCTGTGGCAGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALDLLLC*SVAVVC
Trigger: ACAAACCACTGCCACAGATCAGCAAAGTAGCAAATC...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNTVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAGACAATCCATGCAATTaGTTCGGAACACGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTDNPCN*FGTRLP
Trigger: AGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTC...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAACTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTCTCCCACACCCTATCTaGAATCCGGGACTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CTMESSKPSRFPQIQIQSLPHPI*NPGLRS
Trigger: GCTTCTGAGTCCCGGATTGCAGATAGGGTGTGGGAG...AGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCAAATGTCTGCTCAAGTaGCTTCTCCGAGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVKCLLK*LLRALL
Trigger: CAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AAATGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATTGGTTTGCCACCACCTaGCCAGCAGAGTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: KCLLKWLLRALLVNQIDYWFATT*PAESTR
Trigger: TCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCA...ATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAATCACACCTAAACTGCTaGTGCACTGGCAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQSHLNC*CTGSSS
Trigger: GCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGA...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAGTAGCTGACCAGTCATaGGCATCTTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTVADQS*ASSTLG
Trigger: TCCCAATGTGGAAGATGCCCATGACTGGTCAGCTAC...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGGTAACTGCCACCAGATaGATTGTGCCCAGTATACCA +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKVTATR*IVPSIP
Trigger: TGGTATACTGGGCACAATCCATCTGGTGGCAGTTAC...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR TCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTWSCDS*RRNIFL
Trigger: AAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCA...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACGCAGTGGTTTGTACTTaGGGTTTGGTCTTTGGGACC +
Preference number: 4 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYAVVCT*GLVFGT
Trigger: GGTCCCAAAGACCAAACCTCAAGTACAAACCACTGC...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGCAGTGGTTTGTACTTaGGGTTTGGTCTTTGGGACC +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSAVVCT*GLVFGT
Trigger: GGTCCCAAAGACCAAACCTCAAGTACAAACCACTGC...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATGCAGTGGTTTGTACTTaGGGTTTGGTCTTTGGGACC +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNAVVCT*GLVFGT
Trigger: GGTCCCAAAGACCAAACCTCAAGTACAAACCACTGC...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACTGGAAACCGTCCATGTaGTTTGCTACTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYWKPSM*FATLLI
Trigger: GATCAGCAAAGTAGCAAATCACATGGACGGTTTCCA...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACATGGAAACCGTCCATGTaGTTTGCTACTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTWKPSM*FATLLI
Trigger: GATCAGCAAAGTAGCAAATCACATGGACGGTTTCCA...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACATGGAAACCGTCCATGTaGTTTGCTACTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTWKPSM*FATLLI
Trigger: GATCAGCAAAGTAGCAAATCACATGGACGGTTTCCA...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAAAAAAGACCTTGGGCTaGTGTGGAAAGCGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSKKTLG*CGKRVS
Trigger: ACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTT...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYGKYVI*SIITSF
Trigger: GAAGCTTGTGATGATGGAGCAGATGACGTACTTACC...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGAACATCTTTCTTGACTaGAAGGGTAACCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALNIFLD*KGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTT...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTTVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTTVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKIVANV*SSGFSE
Trigger: CTCGGAGAAGCCACTTGAGCAGACATTTGCAACAAT...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFIVANV*SSGFSE
Trigger: CTCGGAGAAGCCACTTGAGCAGACATTTGCAACAAT...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATATGTGTGGAAAAGTATaGCTGCTAATAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNMCGKV*LLIVTA
Trigger: AGCGGTCACTATTAGCAGGCATACTTTTCCACACAT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAACATCAAGAGTACCATaGGTGAAAAAGCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGTSRVP*VKKQLL
Trigger: TAACAGCTGCTTTTTCACGCATGGTACTCTTGATGT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACATTACCTGCCACCAGATaGATTGTGCCCAGTATACCA +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTLPATR*IVPSIP
Trigger: TGGTATACTGGGCACAATCCATCTGGTGGCAGGTAA...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACAAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGTTCCCGCATATTGCTTaGCACAAGCATTTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKFPHIA*HKHLRC
Trigger: ACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAA...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACTCTATCTTTTCTTTCTaGACCAGTCTGGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYSIFSF*TSLGAS
Trigger: CGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGA...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGTCTATCTTTTCTTTCTaGACCAGTCTGGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKSIFSF*TSLGAS
Trigger: CGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGA...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAATCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGAAACAGAGGCAGCTTTaGACCTCTAGCGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKKQRQL*TSSVRD
Trigger: ATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTT...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
3UTR CAA 72 bp AGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCATTTTTGTAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RHQFPHIAWHKH*RCQPRHFCKSS
Trigger: AGAAGATTTACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTTCCATACAAACCGCTaGTCTGCCCTTTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNFHTNR*SALSKR
Trigger: TCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAA...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTGCAGTGGTTTGTACTTaGGGTTTGGTCTTTGGGACC +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTAVVCT*GLVFGT
Trigger: GGTCCCAAAGACCAAACCTCAAGTACAAACCACTGC...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACACCTCCAAGTGCAATATaGAATCTAGAACAAGACCCT +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTPPSAI*NLEQDP
Trigger: AGGGTCTTGTTCTAGATTTCATATTGCACTTGGAGG...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR GCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCCACCAGATGGATTGTaGCCAGTATACCAAATATTG +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFPPDGL*PVYQIL
Trigger: CAATATTTGGTATACTGGGCACAATCCATCTGGTGG...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTATAAGATAATTACCTaGCACCAGATGGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNYKIIT*HQMDCA
Trigger: GGCACAATCCATCTGGTGGCAGGTAATTATCTTATA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQVLDSR*KVWVKS
Trigger: TGATTTGACCCATACTTTGCAGCGGCTATCCAACAC...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVTVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACACTTGGGAATCAAAATaGCTTTGGAAACCGTCCATG +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYTWESK*LWKPSM
Trigger: CATGGACGGTTTCCAAAGGCATTTTGATTCCCAAGT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTIVANV*SSGFSE
Trigger: CTCGGAGAAGCCACTTGAGCAGACATTTGCAACAAT...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGGACAATCCATGCAATTaGTTCGGAACACGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGDNPCN*FGTRLP
Trigger: AGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTC...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTCCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATCATTCCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTGCTCAAGTGGCATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: IIPLPKEDTIVANVCSSGILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...GCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR GCA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGACTGTTACCCTCCAAGTaGAATATGAAATCTAGAACA +
Preference number: 4 (lower is better)
Translates to: PWADVESGSVKTPVLHNGLLPSK*NMKSRT
Trigger: TGTTCTAGATTTCATATTGCACTTGGAGGGTAACAG...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACAACTGACTTAAGAACCTaGTTTAGGCTGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTTDLRT*FRLELF
Trigger: AAACAGCTCCAGCCTAAAGCAGGTTCTTAAGTCAGT...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATAGCCGCTGCAAAGTATaGGTCAAATCATATGTTGTT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNSRCKV*VKSYVV
Trigger: AACAACATATGATTTGACCCATACTTTGCAGCGGCT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GGGCAAACCGATGAACCTCTGGCTGTGCAGAAAGTTCTCTTAGAAGATGACCATACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: GQTDEPLAVQKVLLEDDHTKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...ATGGTCATCTTCTAAGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNLRFGL*DQKTGI
Trigger: AATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATCTATCTTTTCTTTCTaGACCAGTCTGGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKSIFSF*TSLGAS
Trigger: CGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGA...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTTCACACCTAAACTGCTaGTGCACTGGCAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAISHLNC*CTGSSS
Trigger: GCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGA...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAAACAGAGGCAGCTTTaGACCTCTAGCGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVKQRQL*TSSVRD
Trigger: ATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNWSCDS*RRNIFL
Trigger: AAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCA...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCAAATATTGGTCTTGTaGCAGCTGAAGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVQILVL*QLKEEH
Trigger: ATGTTCCTCCTTCAGCTGTCACAAGACCAATATTTG...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAAGCTCCTCCTCGAGATaGGAATCCAATCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKSSSSR*ESNQSI
Trigger: AATACTTTGATTGGATTCTCATCTCGAGGAGGAGCT...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAACCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGGATTTGCTACTTTGCTaGTCTGTGGCAGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKDLLLC*SVAVVC
Trigger: ACAAACCACTGCCACAGATCAGCAAAGTAGCAAATC...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAGATTTGCTACTTTGCTaGTCTGTGGCAGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKDLLLC*SVAVVC
Trigger: ACAAACCACTGCCACAGATCAGCAAAGTAGCAAATC...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTTTCAAGCACAACACTaGAATATTGCAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNFQAQH*NIAAVF
Trigger: AAACACTGCTGCAATATTTCAGTGTTGTGCTTGAAA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNGKYVI*SIITSF
Trigger: GAAGCTTGTGATGATGGAGCAGATGACGTACTTACC...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAACATCTTTCTTGACTaGAAGGGTAACCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVNIFLD*KGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGVLDSR*KVWVKS
Trigger: TGATTTGACCCATACTTTGCAGCGGCTATCCAACAC...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKVLDSR*KVWVKS
Trigger: TGATTTGACCCATACTTTGCAGCGGCTATCCAACAC...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACATTCTACAAAGTTAGCTaGATGGCCTTCCGAATCAAT +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTFYKVS*MAFRIN
Trigger: ATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAA...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGTACAAACGAAGCTTTaGTCCCATTGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQVQTKL*SHCSAQ
Trigger: TTGTGCACTACAATGGGAGCAAAGCTTCGTTTGTAC...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGIVANV*SSGFSE
Trigger: CTCGGAGAAGCCACTTGAGCAGACATTTGCAACAAT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTGACAATCCATGCAATTaGTTCGGAACACGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVADNPCN*FGTRLP
Trigger: AGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTC...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACATATCTAGACAATCCATaGAATTGCTTCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTYLDNP*NCFGTR
Trigger: GCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTCCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCG +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSPVPAY*LAQAFA
Trigger: CGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGG...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTATGTGTGGAAAAGTATaGCTGCTAATAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVMCGKV*LLIVTA
Trigger: AGCGGTCACTATTAGCAGGCATACTTTTCCACACAT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTTTACCTGCCACCAGATaGATTGTGCCCAGTATACCA +
Preference number: 4 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSLPATR*IVPSIP
Trigger: TGGTATACTGGGCACAATCCATCTGGTGGCAGGTAA...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCAGCCGCTGCAAAGTATaGGTCAAATCATATGTTGTT +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTSRCKV*VKSYVV
Trigger: AACAACATATGATTTGACCCATACTTTGCAGCGGCT...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGAGCCGCTGCAAAGTATaGGTCAAATCATATGTTGTT +
Preference number: 4 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKSRCKV*VKSYVV
Trigger: AACAACATATGATTTGACCCATACTTTGCAGCGGCT...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATTTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GAAGAGCACATAGGCCAGTGTTTCTGTCCAAGTGTCACCAGCCATAAGCAAACACGAGCTAACAAACTCTaGATCACATTGGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: EEHIGQCFCPSVTSHKQTRANKL*ITLVLS
Trigger: AGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCG...TGTTTGCTTATGGCTGGTGACACTTGGACAGAAACACTGGCCTATGTGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGTTCCCGCATATTGCTTaGCACAAGCATTTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKFPHIA*HKHLRC
Trigger: ACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAA...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATCTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTT +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNLSGPV*EHRQNL
Trigger: AAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAG...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCTGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCACACCTAAACTGCTaGTGCACTGGCAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSSHLNC*CTGSSS
Trigger: GCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATGCAAAACTCCTAGTCTCTGAAGTTGGGCCTGAAGTGAACGACGAGCTAACAAGTTGGTCCTTGATTTaGAGTACTATAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: HAKLLVSEVGPEVNDELTSWSLI*STITTW
Trigger: CCAGGTAGTTATAGTACTCCAAATCAAGGACCAACT...TGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAGTTGGTCCTTGATTTaGAGTACTATAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYSWSLI*STITTW
Trigger: CCAGGTAGTTATAGTACTCCAAATCAAGGACCAACT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTGCTCTGCATAGAAAGTaGGGACAAGCGTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILALHRK*GQACPE
Trigger: TTCAGGGCACGCTTGTCCCCACTTTCTATGCAGAGC...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR TCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAWSCDS*RRNIFL
Trigger: AAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCA...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATTTCCATACAAACCGCTaGTCTGCCCTTTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYFHTNR*SALSKR
Trigger: TCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAA...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAAGTTCTCTTAGAAGATaGCCATTCCATACAAACCGC +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSSSLRR*PFHTNR
Trigger: GCGGTTTGTATGGAATGGTCATCTTCTAAGAGAACT...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AAATGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATGATTTGCTACTTTGCTaGTCTGTGGCAGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KCLLKWLLRALLVNQIDYDLLLC*SVAVVC
Trigger: ACAAACCACTGCCACAGATCAGCAAAGTAGCAAATC...ATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR TCA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTIISPK*VLFPVL
Trigger: CAGAACTGGAAAGAGAACTCATTTGGGACTTATAAT...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSIISPK*VLFPVL
Trigger: CAGAACTGGAAAGAGAACTCATTTGGGACTTATAAT...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACACAGATAATGCACATTaGAAAGGCAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYTDNAH*KGNNHD
Trigger: ATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCAAAATTTTTCAGGTGTaGTATGCCAGATATTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFKIFQV*YARYSQ
Trigger: CTGGGAATATCTGGCATATCACACCTGAAAAATTTT...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000455997.5
CDS-3UTR GCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATAACATCTTTCTTGACTaGAAGGGTAACCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNNIFLD*KGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTT...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTTATAAGATAATTACCTaGCACCAGATGGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVYKIIT*HQMDCA
Trigger: GGCACAATCCATCTGGTGGCAGGTAATTATCTTATA...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCTTCTACAAAGTTAGCTaGATGGCCTTCCGAATCAAT +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVFYKVS*MAFRIN
Trigger: ATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAA...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAGTACAAACGAAGCTTTaGTCCCATTGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKVQTKL*SHCSAQ
Trigger: TTGTGCACTACAATGGGAGCAAAGCTTCGTTTGTAC...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTTGGGAATCAAAATaGCTTTGGAAACCGTCCATG +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKTWESK*LWKPSM
Trigger: CATGGACGGTTTCCAAAGGCATTTTGATTCCCAAGT...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATATCTAGACAATCCATaGAATTGCTTCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKYLDNP*NCFGTR
Trigger: GCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTCTTGGCACAAGCATTTaGGTTGTCAGCCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFLGTSI*VVSPGI
Trigger: AATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAG...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVAKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTAAATGTTCCAATGCTTaGAACTCCCCAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTKCSNA*NSPEEH
Trigger: GTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCTGTTACCCTCCAAGTaGAATATGAAATCTAGAACA +
Preference number: 4 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFLLPSK*NMKSRT
Trigger: TGTTCTAGATTTCATATTGCACTTGGAGGGTAACAG...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCATTTTCAGGTGTGATATaGCAGATATTCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSFSGVI*QIFPGC
Trigger: ACAGCCTGGGAATATCTGGCATATCACACCTGAAAA...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATAGATTTGTTGATTTGTaGGTAGACTCTAAATTGCTG +
Preference number: 4 (lower is better)
Translates to: RPWADVESGSVKTPVLHNRFVDL*VDSKLL
Trigger: CAGCAATTTAGAGTCTACGCACAAATCAACAAATCT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTTACCTGCCACCAGATaGATTGTGCCCAGTATACCA +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSLPATR*IVPSIP
Trigger: TGGTATACTGGGCACAATCCATCTGGTGGCAGGTAA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCAGCCGCTGCAAAGTATaGGTCAAATCATATGTTGTT +
Preference number: 4 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVSRCKV*VKSYVV
Trigger: AACAACATATGATTTGACCCATACTTTGCAGCGGCT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTTTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATT +
Preference number: 4 (lower is better)
Translates to: ALKRPWADVESGSVKTPVLRFGL*DQKTGI
Trigger: AATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAA...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAACTCTGGATCACATTaGTTCTATCTAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYNSGSH*FYLDNP
Trigger: TGGATTGTCTAGATAGAACCAATGTGATCCAGAGTT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTTTCCCGCATATTGCTTaGCACAAGCATTTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVAFPHIA*HKHLRC
Trigger: ACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAA...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTCTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTT +
Preference number: 4 (lower is better)
Translates to: CTMESSKPSRFPQIQIQSLSGPV*EHRQNL
Trigger: AAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAG...AGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATAAACTGCTGGTGCACTaGCAGTTCAAGCTGATTAAA +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNKLLVH*QFKLIK
Trigger: TTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTT...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTAGTTCTCTTAGAAGATaGCCATTCCATACAAACCGC +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVASSLRR*PFHTNR
Trigger: GCGGTTTGTATGGAATGGTCATCTTCTAAGAGAACT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTAGCTCCTCCTCGAGATaGGAATCCAATCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTSSSSR*ESNQSI
Trigger: AATACTTTGATTGGATTCTCATCTCGAGGAGGAGCT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AATGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATACCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: NVCSSGFSEPFWLIRLIIPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR TCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTGATTTGCTACTTTGCTaGTCTGTGGCAGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSDLLLC*SVAVVC
Trigger: ACAAACCACTGCCACAGATCAGCAAAGTAGCAAATC...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTGGAAACCGTCCATGTaGTTTGCTACTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSWKPSM*FATLLI
Trigger: GATCAGCAAAGTAGCAAATCACATGGACGGTTTCCA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTIISPK*VLFPVL
Trigger: CAGAACTGGAAAGAGAACTCATTTGGGACTTATAAT...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAACAGATAATGCACATTaGAAAGGCAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQTDNAH*KGNNHD
Trigger: ATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGT...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAACAGATAATGCACATTaGAAAGGCAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKTDNAH*KGNNHD
Trigger: ATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGT...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATTTCAAGCACAACACTaGAATATTGCAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKFQAQH*NIAAVF
Trigger: AAACACTGCTGCAATATTTCAGTGTTGTGCTTGAAA...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDGKYVI*SIITSF
Trigger: GAAGCTTGTGATGATGGAGCAGATGACGTACTTACC...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDGKYVI*SIITSF
Trigger: GAAGCTTGTGATGATGGAGCAGATGACGTACTTACC...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSGKYVI*SIITSF
Trigger: GAAGCTTGTGATGATGGAGCAGATGACGTACTTACC...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTCCACCAGATGGATTGTaGCCAGTATACCAAATATTG +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAPPDGL*PVYQIL
Trigger: CAATATTTGGTATACTGGGCACAATCCATCTGGTGG...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATGTGTTGGATAGCCGCTaGAAAGTATGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDVLDSR*KVWVKS
Trigger: TGATTTGACCCATACTTTGCAGCGGCTATCCAACAC...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTTCTACAAAGTTAGCTaGATGGCCTTCCGAATCAAT +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGFYKVS*MAFRIN
Trigger: ATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAA...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAACCGTCCATGTGATTTaGTACTTTGCTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVETVHVI*YFADLW
Trigger: CCACAGATCAGCAAAGTAGCAAATCACATGGACGGT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTACTTGGGAATCAAAATaGCTTTGGAAACCGTCCATG +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTTWESK*LWKPSM
Trigger: CATGGACGGTTTCCAAAGGCATTTTGATTCCCAAGT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGGAAGACACCATTGTTaGAAATGTCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEGRHHC*KCLLKW
Trigger: CCACTTGAGCAGACATTTGCAACAATGGTGTCTTCC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTTATCTAGACAATCCATaGAATTGCTTCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAIYLDNP*NCFGTR
Trigger: GCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAATTCTGTCATCATCCTaGATGGAGCACAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEILSSS*MEHKMC
Trigger: GCACATCTTGTGCTCCATGCAGGATGATGACAGAAT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTTATTATCTTGTAACTaGCACCAGATGGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: MCFWIKALKRPWADVESGLLSCN*HQMDCA
Trigger: GGCACAATCCATCTGGTGGCAGTTACAAGATAATAA...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTTTACCTGCCACCAGATaGATTGTGCCCAGTATACCA +
Preference number: 4 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILLPATR*IVPSIP
Trigger: TGGTATACTGGGCACAATCCATCTGGTGGCAGGTAA...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWATKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVATKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGTTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATT +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKLRFGL*DQKTGI
Trigger: AATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAA...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAIYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAATTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 4 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAACTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTT +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVELSGPV*EHRQNL
Trigger: AAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAG...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTCTTTCTGGACCAGTCTaGGAGCATCGACAAAATCTT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSLSGPV*EHRQNL
Trigger: AAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAG...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATCTATCTTTTCTTTCTaGACCAGTCTGGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVESIFSF*TSLGAS
Trigger: CGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTTCCAGTTCTGCACAATaGAATCTTCCAAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFSSSAQ*NLPSQA
Trigger: GGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCATTAAAAAGACCTTaGGCTGATGTGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFALKRP*ADVESG
Trigger: CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTTGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAGTAGCTGACCAGTCATaGGCATCTTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKVADQS*ASSTLG
Trigger: TCCCAATGTGGAAGATGCCCATGACTGGTCAGCTAC...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAGAACCTGCTTTAGGCTaGAGCTGTTTAAAATTTAAA +
Preference number: 4 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSEPALG*SCLKFK
Trigger: TTTAAATTTTAAACAGCTCCAGCCTAAAGCAGGTTC...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR TCA 90 bp CACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTCAGTCTATAGTTCTCTTAGAAGATaGCCATTCCATACAAACCGC +
Preference number: 4 (lower is better)
Translates to: HNGIFQAKPLSTNTNSVYSSLRR*PFHTNR
Trigger: GCGGTTTGTATGGAATGGTCATCTTCTAAGAGAACT...ATAGACTGAATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATAGCTCCTCCTCGAGATaGGAATCCAATCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDSSSSR*ESNQSI
Trigger: AATACTTTGATTGGATTCTCATCTCGAGGAGGAGCT...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATAGCTCCTCCTCGAGATaGGAATCCAATCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDSSSSR*ESNQSI
Trigger: AATACTTTGATTGGATTCTCATCTCGAGGAGGAGCT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKIISPK*VLFPVL
Trigger: CAGAACTGGAAAGAGAACTCATTTGGGACTTATAAT...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATACAGATAATGCACATTaGAAAGGCAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNTDNAH*KGNNHD
Trigger: ATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGT...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCCTCTTTCCTATCATaGAGTCACAGACTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSSSFLS*SHRLSH
Trigger: ATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTCCTCTTTCCTATCATaGAGTCACAGACTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDSSFLS*SHRLSH
Trigger: ATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGA...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTCCTCCAAGTGCAATATaGAATCTAGAACAAGACCCT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSPPSAI*NLEQDP
Trigger: AGGGTCTTGTTCTAGATTTCATATTGCACTTGGAGG...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTTATAAGATAATTACCTaGCACCAGATGGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSYKIIT*HQMDCA
Trigger: GGCACAATCCATCTGGTGGCAGGTAATTATCTTATA...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTTTCTACAAAGTTAGCTaGATGGCCTTCCGAATCAAT +
Preference number: 4 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSFYKVS*MAFRIN
Trigger: ATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAA...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGTACAAACGAAGCTTTaGTCCCATTGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEVQTKL*SHCSAQ
Trigger: TTGTGCACTACAATGGGAGCAAAGCTTCGTTTGTAC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTACTTGGGAATCAAAATaGCTTTGGAAACCGTCCATG +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSTWESK*LWKPSM
Trigger: CATGGACGGTTTCCAAAGGCATTTTGATTCCCAAGT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAACTTGGGAATCAAAATaGCTTTGGAAACCGTCCATG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVETWESK*LWKPSM
Trigger: CATGGACGGTTTCCAAAGGCATTTTGATTCCCAAGT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTATCTAGACAATCCATaGAATTGCTTCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDYLDNP*NCFGTR
Trigger: GCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTATGTGTGGAAAAGTATaGCTGCTAATAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSMCGKV*LLIVTA
Trigger: AGCGGTCACTATTAGCAGGCATACTTTTCCACACAT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAATCATCACACCTAAACTaGTGGTGCACTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKSSHLN*WCTGSS
Trigger: TGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGA...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTACATCAAGAGTACCATaGGTGAAAAAGCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWATSRVP*VKKQLL
Trigger: TAACAGCTGCTTTTTCACGCATGGTACTCTTGATGT...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATTTTCAGGTGTGATATaGCAGATATTCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEFSGVI*QIFPGC
Trigger: ACAGCCTGGGAATATCTGGCATATCACACCTGAAAA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000455997.5
CDS-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSTKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATTTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 4 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCATTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 4 (lower is better)
Translates to: CFWIKALKRPWADVESGSFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGAACTCTGGATCACATTaGTTCTATCTAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: WIKALKRPWADVESGSVKNSGSH*FYLDNP
Trigger: TGGATTGTCTAGATAGAACCAATGTGATCCAGAGTT...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAAACTCTGGATCACATTaGTTCTATCTAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKNSGSH*FYLDNP
Trigger: TGGATTGTCTAGATAGAACCAATGTGATCCAGAGTT...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACAACTCTGGATCACATTaGTTCTATCTAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYNSGSH*FYLDNP
Trigger: TGGATTGTCTAGATAGAACCAATGTGATCCAGAGTT...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTCGAGCTAACAAACTCTaGATCACATTGGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: HSLQSSHISSSDLVFVVARANKL*ITLVLS
Trigger: AGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCG...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCGAGCTAACAAACTCTaGATCACATTGGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTRANKL*ITLVLS
Trigger: AGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSCHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATGTCATCATCCTGCATaGAGCACAAGATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVECHHPA*STRCAF
Trigger: AAAAGCACATCTTGTGCTCCATGCAGGATGATGACA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAAAGTCCAAAGATGTGTaGAAAAGTATGCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKKSKDV*KSMPAN
Trigger: ATTAGCAGGCATACTTTTCCACACATCTTTGGACTT...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACAAGTCCAAAGATGTGTaGAAAAGTATGCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYKSKDV*KSMPAN
Trigger: ATTAGCAGGCATACTTTTCCACACATCTTTGGACTT...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATAAACTGCTGGTGCACTaGCAGTTCAAGCTGATTAAA +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDKLLVH*QFKLIK
Trigger: TTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTAGTTCTCTTAGAAGATaGCCATTCCATACAAACCGC +
Preference number: 4 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILSSLRR*PFHTNR
Trigger: GCGGTTTGTATGGAATGGTCATCTTCTAAGAGAACT...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTATTATAAGTCCCAAATaGGTTCTCTTTCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAIIISPK*VLFPVL
Trigger: CAGAACTGGAAAGAGAACTCATTTGGGACTTATAAT...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTACAGATAATGCACATTaGAAAGGCAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWATDNAH*KGNNHD
Trigger: ATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGT...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTCCTCCAAGTGCAATATaGAATCTAGAACAAGACCCT +
Preference number: 4 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILPPSAI*NLEQDP
Trigger: AGGGTCTTGTTCTAGATTTCATATTGCACTTGGAGG...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTTTTCAAGCACAACACTaGAATATTGCAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSFQAQH*NIAAVF
Trigger: AAACACTGCTGCAATATTTCAGTGTTGTGCTTGAAA...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAATATAAGATAATTACCTaGCACCAGATGGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEYKIIT*HQMDCA
Trigger: GGCACAATCCATCTGGTGGCAGGTAATTATCTTATA...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTGACAATCCATGCAATTaGTTCGGAACACGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSDNPCN*FGTRLP
Trigger: AGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTC...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTTATCTAGACAATCCATaGAATTGCTTCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFYLDNP*NCFGTR
Trigger: GCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTACATCAAGAGTACCATaGGTGAAAAAGCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: RSNTLILVHSLQSSHISSTSRVP*VKKQLL
Trigger: TAACAGCTGCTTTTTCACGCATGGTACTCTTGATGT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCCGCTGCAAAGTATaGGTCAAATCATATGTTGTT +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVESRCKV*VKSYVV
Trigger: AACAACATATGATTTGACCCATACTTTGCAGCGGCT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTAAGAGACTCATTTCTTaGAATTCAGGACTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: IKALKRPWADVESGSVKTKRLIS*NSGLVL
Trigger: CAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AATGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATAAAGAGACTCATTTCTTaGAATTCAGGACTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: NVCSSGFSEPFWLIRLIIKRLIS*NSGLVL
Trigger: CAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTT...TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAAAACCGATGAACCTCTaGCTGTGCAGAAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKKPMNL*LCRKFS
Trigger: AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTT...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTTTCTCCGAGCCCTTCTaGTTAATCAGATTGATTATA +
Preference number: 4 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAFSEPF*LIRLII
Trigger: TATAATCAATCTGATTAACCAGAAGGGCTCGGAGAA...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATCGAGCTAACAAACTCTaGATCACATTGGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDRANKL*ITLVLS
Trigger: AGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCG...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAACGAGCTAACAAACTCTaGATCACATTGGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVERANKL*ITLVLS
Trigger: AGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCG...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTTCTATCTTTTCTTTCTaGACCAGTCTGGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLSIFSF*TSLGAS
Trigger: CGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGA...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGAAACAGAGGCAGCTTTaGACCTCTAGCGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: KSMPANSDRFYNDNNETEKQRQL*TSSVRD
Trigger: ATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTT...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATAGTTGGTCCTTGATTTaGAGTACTATAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: NTLILVHSLQSSHISSSDSWSLI*STITTW
Trigger: CCAGGTAGTTATAGTACTCCAAATCAAGGACCAACT...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTAGTTCTCTTAGAAGATaGCCATTCCATACAAACCGC +
Preference number: 4 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLSSLRR*PFHTNR
Trigger: GCGGTTTGTATGGAATGGTCATCTTCTAAGAGAACT...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTCCAGAAAACAGGTATTaGTCCTCGAGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLPENRY*SSSLYK
Trigger: TTTGTACAGACTCGAGGATCAATACCTGTTTTCTGG...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR TCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTTGGAAACCGTCCATGTaGTTTGCTACTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSWKPSM*FATLLI
Trigger: GATCAGCAAAGTAGCAAATCACATGGACGGTTTCCA...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAATCCTCTTTCCTATCATaGAGTCACAGACTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKSSFLS*SHRLSH
Trigger: ATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGA...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAAAATTTTTCAGGTGTaGTATGCCAGATATTCCCAG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEKIFQV*YARYSQ
Trigger: CTGGGAATATCTGGCATATCACACCTGAAAAATTTT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000455997.5
CDS-3UTR GCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAAACATCTTTCTTGACTaGAAGGGTAACCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKNIFLD*KGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTT...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTCCACCAGATGGATTGTaGCCAGTATACCAAATATTG +
Preference number: 4 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLPPDGL*PVYQIL
Trigger: CAATATTTGGTATACTGGGCACAATCCATCTGGTGG...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR GCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGCCACCAGATGGATTGTaGCCAGTATACCAAATATTG +
Preference number: 4 (lower is better)
Translates to: KSMPANSDRFYNDNNETEPPDGL*PVYQIL
Trigger: CAATATTTGGTATACTGGGCACAATCCATCTGGTGG...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAACCGAAAAGTCAATTTaGAGTACCAAAATTACCGAG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVETEKSI*STKITE
Trigger: CTCGGTAATTTTGGTACTGCAAATTGACTTTTCGGT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGTCCACATTCAAGACATaGTTTAGCATCGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSMPANSDRFYNDNNETESTFKT*FSIARK
Trigger: CTTCCTAGCGATGCTAAACCATGTCTTGAATGTGGA...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAAGAGACTCATTTCTTaGAATTCAGGACTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HKMCFWIKALKRPWADVEKRLIS*NSGLVL
Trigger: CAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATAAGAGACTCATTTCTTaGAATTCAGGACTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDKRLIS*NSGLVL
Trigger: CAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTTTCCCGCATATTGCTTaGCACAAGCATTTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSFPHIA*HKHLRC
Trigger: ACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAA...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR TCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTAGCTCCTCCTCGAGATaGGAATCCAATCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSSSSSR*ESNQSI
Trigger: AATACTTTGATTGGATTCTCATCTCGAGGAGGAGCT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR GCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTAACATCTTTCTTGACTaGAAGGGTAACCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSNIFLD*KGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTACAAAGTTAGCTGCATaGCCTTCCGAATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSTKLAA*PSESIP
Trigger: AGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAATTGAGGTTTGGTCTTTaGGACCAGAAAACAGGTATT +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKLRFGL*DQKTGI
Trigger: AATACCTGTTTTCTGGTCCCAAAGACCAAACCTCAA...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTTACTTTGCTGATCTGTaGCAGTGGTTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSYFADL*QWFVLE
Trigger: CTCAAGTACAAACCACTGCCACAGATCAGCAAAGTA...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTAAACTGCTGGTGCACTaGCAGTTCAAGCTGATTAAA +
Preference number: 4 (lower is better)
Translates to: THSLIANKILDRVKNIKSKLLVH*QFKLIK
Trigger: TTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTT...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGCAGACAAGAAAAGTGTaGATGCTAATGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: KSMPANSDRFYNDNNETEQTRKV*MLMGNT
Trigger: AGTGTTACCCATTAGCATCCACACTTTTCTTGTCTG...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR GCA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGCTGTTACCCTCCAAGTaGAATATGAAATCTAGAACA +
Preference number: 4 (lower is better)
Translates to: KSMPANSDRFYNDNNETELLPSK*NMKSRT
Trigger: TGTTCTAGATTTCATATTGCACTTGGAGGGTAACAG...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CCA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAAAGTCCAAAGATGTGTaGAAAAGTATGCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKKSKDV*KSMPAN
Trigger: ATTAGCAGGCATACTTTTCCACACATCTTTGGACTT...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS CCA 90 bp CGAGCACGGTGGAGAAAGGCCGGCGAGCCGCTGGTTCCCGGCCTATaGCTACTCGGGCGAGGCCTAGGAGAGGCCGCGCCGGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: RARWRKAGEPLVPGL*LLGRGLGEAAPAEE
Trigger: TTCCTCAGCCGGCGCGGCCTCTCCTAGGCCTCGCCCGAGTAGCCATAGGCCGGGAACCAGCGGCTCGCCGGCCTTTCTCCACCGTGCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 90 bp AAGCGTGCCCTGAAGGGCCGCATCATAACGCCGACCCCGGCTCGGTaGGGGCCAGTCGGCAGCTTCTCTCTTCAGCCGTGGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KRALKGRIITPTPAR*GPVGSFSLQPWALG
Trigger: CCCCAGCGCCCACGGCTGAAGAGAGAAGCTGCCGACTGGCCCCCACCGAGCCGGGGTCGGCGTTATGATGCGGCCCTTCAGGGCACGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 90 bp CAAGCAAGAGCACGCGAGAGATGCCGCCGACGCGGCGGGTTGGAGTaGGACGAAGAGCGCCGTGACGAAGCCGCTGCGGATTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QARARERCRRRGGLE*DEERRDEAAADWWG
Trigger: GCCCCACCAATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 90 bp TCGGCAGCTTCTCTCTTCAGCCGTGGGCGCTGGGGCCGAGCACGGTaGAGAAAGGCCGGCGAGCCGCTGGTTCCCGGCCTATGGCTACTC +
Preference number: 5 (lower is better)
Translates to: SAASLFSRGRWGRAR*RKAGEPLVPGLWLL
Trigger: GAGTAGCCATAGGCCGGGAACCAGCGGCTCGCCGGCCTTTCTCCACCGTGCTCGGCCCCAGCGCCCACGGCTGAAGAGAGAAGCTGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 90 bp GTGCGCAAGCAAGAGCACGCGAGAGATGCCGCCGACGCGGCGGGTTaGAGTGCGACGAAGAGCGCCGTGACGAAGCCGCTGCGGATTGGT +
Preference number: 5 (lower is better)
Translates to: VRKQEHARDAADAAG*SATKSAVTKPLRIG
Trigger: ACCAATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGCTTGCGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 90 bp GGCGGTGGAGGACAAATTAGTGCGCAAGCAAGAGCACGCGAGAGATaGCGCCGACGCGGCGGGTTGGAGTGCGACGAAGAGCGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: GGGGQISAQARARER*RRRGGLECDEERRD
Trigger: GTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGCTTGCGCACTAATTTGTCCTCCACCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS TCA 90 bp CGGCCTATGGCTACTCGGGCGAGGCCTAGGAGAGGCCGCGCCGGCTaGGGAAAACCGGTAAATGCGAGGAGCTCCCACACCCTATCTGCA +
Preference number: 5 (lower is better)
Translates to: RPMATRARPRRGRAG*GKPVNARSSHTLSA
Trigger: TGCAGATAGGGTGTGGGAGCTCCTCGCATTTACCGGTTTTCCTCAGCCGGCGCGGCCTCTCCTAGGCCTCGCCCGAGTAGCCATAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 90 bp CGGCTGAGGAAAACCGGTAAATGCGAGGAGCTCCCACACCCTATCTaGAATCCGGGACTCAGAAGCCCTCCCCGAGGCCAGGGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: RLRKTGKCEELPHPI*NPGLRSPPRGQGPH
Trigger: GTGCGGGCCCTGGCCTCGGGGAGGGCTTCTGAGTCCCGGATTGCAGATAGGGTGTGGGAGCTCCTCGCATTTACCGGTTTTCCTCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 90 bp TGCCCAGGGCAGACTGCAAAGCCTCTCCTGAGGGCACCTTTGCCTTaGAGCCCCCGCACTCCCTTGAGGGATAGCAGCAGGACTATACTC +
Preference number: 5 (lower is better)
Translates to: CPGQTAKPLLRAPLP*SPRTPLRDSSRTIL
Trigger: GAGTATAGTCCTGCTGCTATCCCTCAAGGGAGTGCGGGGGCTGCAAGGCAAAGGTGCCCTCAGGAGAGGCTTTGCAGTCTGCCCTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471207.1
CDS-3UTR CAA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACACGCCGACGCGGCGGGTaGGAGTGCGACGAAGAGCGC +
Preference number: 5 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTRRRGG*ECDEER
Trigger: GCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCG...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CAA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RPWADVESGSVKTPVLHNTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCAGAGTCAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: AIASEHAFLVCHHLASRVNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...GACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTCGAAGCCGCTGCGGATaGGTGGGGCGCGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSRSRCG*VGRVLG
Trigger: CCCCAAAACGCGCCCCACCAATCCGCAGCGGCTTCG...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CAA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: RPWADVESGSVKTPVLHNAWHKH*RCQPRH
Trigger: ATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGC...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGCGGAATCAAAATGCCTTaGGAAACCGTCCATGTGATT +
Preference number: 5 (lower is better)
Translates to: IHAIASEHAFLVCHHLASGIKMP*ETVHVI
Trigger: AATCACATGGACGGTTTCCAAAGGCATTTTGATTCC...GCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: PWADVESGSVKTPVLHNGTSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGCAGTGGTTTGTACTaGAGGTTTGGTCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: RPWADVESGSVKTPVLHNGSGLY*RFGLWD
Trigger: GTCCCAAAGACCAAACCTCAAGTACAAACCACTGCC...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKAWHKH*RCQPRH
Trigger: ATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGC...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQAWHKH*RCQPRH
Trigger: ATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGC...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATCTGCCACCAGATGGATaGTGCCCAGTATACCAAATA +
Preference number: 5 (lower is better)
Translates to: RPWADVESGSVKTPVLHNLPPDG*CPVYQI
Trigger: TATTTGGTATACTGGGCACAATCCATCTGGTGGCAG...ATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACGGCAGTGGTTTGTACTaGAGGTTTGGTCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYGSGLY*RFGLWD
Trigger: GTCCCAAAGACCAAACCTCAAGTACAAACCACTGCC...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTTGCCACCACCTGGCCAGAAACTCTGGATCACATaGGTTCTATCTAGACAATCC +
Preference number: 5 (lower is better)
Translates to: NPCNCFGTRLPGLPPPGQKLWIT*VLSRQS
Trigger: GGATTGTCTAGATAGAACCAATGTGATCCAGAGTTT...CTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CAA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACGGAGGAACATCTTTCTaGACTGCAAGGGTAACCTCT +
Preference number: 5 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYGGTSF*TARVTS
Trigger: AGAGGTTACCCTTGCAGTCAAGAAAGATGTTCCTCC...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAGGCAGTGGTTTGTACTaGAGGTTTGGTCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKGSGLY*RFGLWD
Trigger: GTCCCAAAGACCAAACCTCAAGTACAAACCACTGCC...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLTRLPG*PPPGQQ
Trigger: CTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGT...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ALKRPWADVESGSVKTPVRQSMQ*LRNTPS
Trigger: GGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGATTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: PWADVESGSVKTPVLHNGLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...TCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAGCACAAGCATTTGCGTaGTCAGCCCAGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKAQAFA*SAQAFL
Trigger: CAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGC...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCACAAGCATTTGCGTaGTCAGCCCAGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQAQAFA*SAQAFL
Trigger: CAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGC...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: TPVLHNGIFQAKPLSTNTVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...TGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQTSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAGCTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: KLIKVMRQPTRDFKEPQTNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...GGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACATCTGTGGCAGTGGTTaGTACTTGAGGTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: DSSSAQWNLPSQAAFHKYICGSG*YLRFGL
Trigger: AAGACCAAACCTCAAGTACAAACCACTGCCACAGAT...GTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGAGACAATCCATGCAATaGCTTCGGAACACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: WIKALKRPWADVESGSVKRQSMQ*LRNTPS
Trigger: GGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGCTTGGCACAAGCATTaGCGTTGTCAGCCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEAWHKH*RCQPRH
Trigger: ATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGGGAATTTCCAGTCCCTaGGAACACTTAAAGGACTAT +
Preference number: 5 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALGISSP*EHLKDY
Trigger: ATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCC...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAAAAATGTTCCAATGCTaGCAACTCCCCAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSKMFQC*QLPRRA
Trigger: TGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTTT...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS TCA 90 bp CAGATGGATTGTGCCCAGTATACCAAATATTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTTGACTGCAAGGGTAACCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: QMDCAQYTKYWSCDS*RRNIFLDCKGNLCG
Trigger: TCCACAGAGGTTACCCTTGCAGTCAAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCAATATTTGGTATACTGGGCACAATCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000438671.3
ENST00000441228.5
ENST00000445499.2
ENST00000455997.5
ENST00000463237.5
ENST00000463347.5
ENST00000464524.5
ENST00000478586.3
ENST00000672477.1
ENST00000672858.2
CDS-3UTR CAA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGGGAGGAACATCTTTCTaGACTGCAAGGGTAACCTCT +
Preference number: 5 (lower is better)
Translates to: MCFWIKALKRPWADVESGGGTSF*TARVTS
Trigger: AGAGGTTACCCTTGCAGTCAAGAAAGATGTTCCTCC...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGGGACATCAAAATCTGTaGCTTTCCAGACTACATGAC +
Preference number: 5 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKGHQNL*LSRLHD
Trigger: GTCATGTAGTCTGGAAAGCAACAGATTTTGATGTCC...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTGGCAGTGGTTTGTACTaGAGGTTTGGTCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTGSGLY*RFGLWD
Trigger: GTCCCAAAGACCAAACCTCAAGTACAAACCACTGCC...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAAGGAAGACACCATTGTaGCAAATGTCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKRKTPL*QMSAQV
Trigger: CACTTGAGCAGACATTTGCAACAATGGTGTCTTCCT...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTGCCATTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VYLFFLDQSGSIDKIFAIRQSMQ*LRNTPS
Trigger: GGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT...AATGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSRQSMQ*LRNTPS
Trigger: GGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGAAACTCTGGATCACATaGGTTCTATCTAGACAATCC +
Preference number: 5 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALKLWIT*VLSRQS
Trigger: GGATTGTCTAGATAGAACCAATGTGATCCAGAGTTT...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGCACAAGCATTTGCGTaGTCAGCCCAGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAAQAFA*SAQAFL
Trigger: CAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGC...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: HSLQSSHISSSDLVFVVATSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSTSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTCTGCCACCAGATGGATaGTGCCCAGTATACCAAATA +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSLPPDG*CPVYQI
Trigger: TATTTGGTATACTGGGCACAATCCATCTGGTGGCAG...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTGGACATCAAAATCTGTaGCTTTCCAGACTACATGAC +
Preference number: 5 (lower is better)
Translates to: ALKRPWADVESGSVKTPVGHQNL*LSRLHD
Trigger: GTCATGTAGTCTGGAAAGCAACAGATTTTGATGTCC...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCAAGAGACTCATTTCTaGGAATTCAGGACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: ESGSVKTPVLHNGIFQAKQETHF*EFRTSV
Trigger: AACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTG...CTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCAAGAGACTCATTTCTaGGAATTCAGGACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: VSKDSSSAQWNLPSQAAFQETHF*EFRTSV
Trigger: AACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTG...GAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 5 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAGGAATCAAAATGCCTTaGGAAACCGTCCATGTGATT +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKGIKMP*ETVHVI
Trigger: AATCACATGGACGGTTTCCAAAGGCATTTTGATTCC...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGTCTGCTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATCAGATTGATTATAACAGGAAGACACCATTGTaGCAAATGTCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CLLKWLLRALLVNQIDYNRKTPL*QMSAQV
Trigger: CACTTGAGCAGACATTTGCAACAATGGTGTCTTCCT...GTTATAATCAATCTGATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441228.5
CDS-3UTR CAA 90 bp GACCTCATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACAGGAAGACACCATTGTaGCAAATGTCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: DLILLFPIMKSQTVSSNYRKTPL*QMSAQV
Trigger: CACTTGAGCAGACATTTGCAACAATGGTGTCTTCCT...GTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATAGGAAGACACCATTGTaGCAAATGTCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNRKTPL*QMSAQV
Trigger: CACTTGAGCAGACATTTGCAACAATGGTGTCTTCCT...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGCCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: MCFWIKALKRPWADVESGPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTAGACAATCCATGCAATaGCTTCGGAACACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSNTLILVHSLQSSHISSRQSMQ*LRNTPS
Trigger: GGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGCACAAGCATTTGCGTaGTCAGCCCAGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEAQAFA*SAQAFL
Trigger: CAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTG +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEVPAYC*AQAFAL
Trigger: CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAAC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAAGGAATTTCCAGTCCCTaGGAACACTTAAAGGACTAT +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKGISSP*EHLKDY
Trigger: ATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCC...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGGAATTTCCAGTCCCTaGGAACACTTAAAGGACTAT +
Preference number: 5 (lower is better)
Translates to: DVESGSVKTPVLHNGIFQGISSP*EHLKDY
Trigger: ATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCC...TTGGAAGATTCCATTGTGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAAAAATGTTCCAATGCTaGCAACTCCCCAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: CFWIKALKRPWADVESGSKMFQC*QLPRRA
Trigger: TGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTTT...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CTGATTAAAGTCATGAGGCAGCCCACCAGAGACTTTAAAGAACCCCAGACCTCAAAGTTGGTCCTTGATTaGGAGTACTATAACTACCTG +
Preference number: 5 (lower is better)
Translates to: LIKVMRQPTRDFKEPQTSKLVLD*EYYNYL
Trigger: CAGGTAGTTATAGTACTCCAAATCAAGGACCAACTT...TGAGGTCTGGGGTTCTTTAAAGTCTCTGGTGGGCTGCCTCATGACTTTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTTGGCACAAGCATTTGCGTTGCAAAGACTCAAGAACTaGGATTTACCGAAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: SVFKAPVPAYCLAQAFALQRLKN*DLPKSQ
Trigger: TTGACTTTTCGGTAAATCCAAGTTCTTGAGTCTTTG...CAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 90 bp AAGGGTAACCTCTGTGGACACACGGTCAATGGTAAGTACGTCATCTaGTCCATCATCACAAGCTTCCACATAAAATTTTTCAGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: KGNLCGHTVNGKYVI*SIITSFHIKFFRCD
Trigger: ATCACACCTGAAAAATTTTATGTGGAAGCTTGTGATGATGGAGCAGATGACGTACTTACCATTGACCGTGTGTCCACAGAGGTTACCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000438671.3
ENST00000441228.5
ENST00000445499.2
ENST00000455997.5
ENST00000463237.5
ENST00000463347.5
ENST00000464524.5
ENST00000478586.3
ENST00000672477.1
ENST00000672858.2
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAGGAGGAACATCTTTCTaGACTGCAAGGGTAACCTCT +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEGGTSF*TARVTS
Trigger: AGAGGTTACCCTTGCAGTCAAGAAAGATGTTCCTCC...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAAGGACATCAAAATCTGTaGCTTTCCAGACTACATGAC +
Preference number: 5 (lower is better)
Translates to: SSSAQWNLPSQAAFHKYKGHQNL*LSRLHD
Trigger: GTCATGTAGTCTGGAAAGCAACAGATTTTGATGTCC...TTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTCAAGAGACTCATTTCTaGGAATTCAGGACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: ALKRPWADVESGSVKTPVQETHF*EFRTSV
Trigger: AACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTG...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 5 (lower is better)
Translates to: MCFWIKALKRPWADVESGTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 5 (lower is better)
Translates to: CFWIKALKRPWADVESGSTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATTTGGTCTTTGTTGTAGCTATCTGTGGCAGTGGTTaGTACTTGAGGTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HSLQSSHISSSDLVFVVAICGSG*YLRFGL
Trigger: AAGACCAAACCTCAAGTACAAACCACTGCCACAGAT...AGCTACAACAAAGACCAAATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTATCTGTGGCAGTGGTTaGTACTTGAGGTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: CMEHKMCFWIKALKRPWAICGSG*YLRFGL
Trigger: AAGACCAAACCTCAAGTACAAACCACTGCCACAGAT...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGGGAATCAAAATGCCTTaGGAAACCGTCCATGTGATT +
Preference number: 5 (lower is better)
Translates to: MCFWIKALKRPWADVESGGIKMP*ETVHVI
Trigger: AATCACATGGACGGTTTCCAAAGGCATTTTGATTCC...CCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGGAATCAAAATGCCTTaGGAAACCGTCCATGTGATT +
Preference number: 5 (lower is better)
Translates to: CFWIKALKRPWADVESGSGIKMP*ETVHVI
Trigger: AATCACATGGACGGTTTCCAAAGGCATTTTGATTCC...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATGGAATCAAAATGCCTTaGGAAACCGTCCATGTGATT +
Preference number: 5 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNGIKMP*ETVHVI
Trigger: AATCACATGGACGGTTTCCAAAGGCATTTTGATTCC...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTAGGAAGACACCATTGTaGCAAATGTCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTRKTPL*QMSAQV
Trigger: CACTTGAGCAGACATTTGCAACAATGGTGTCTTCCT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCAAACTCTGGATCACATaGGTTCTATCTAGACAATCC +
Preference number: 5 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVKLWIT*VLSRQS
Trigger: GGATTGTCTAGATAGAACCAATGTGATCCAGAGTTT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp GCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCCAGTTAAACTCTGGATCACATaGGTTCTATCTAGACAATCC +
Preference number: 5 (lower is better)
Translates to: ALKRPWADVESGSVKTPVKLWIT*VLSRQS
Trigger: GGATTGTCTAGATAGAACCAATGTGATCCAGAGTTT...AACTGGAGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCATTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: CFWIKALKRPWADVESGSLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...TGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFTSSRI*LGTSIC
Trigger: GCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp CCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAATACAAATGGAATTTCCAGTCCCTaGGAACACTTAAAGGACTAT +
Preference number: 5 (lower is better)
Translates to: PVLHNGIFQAKPLSTNTNGISSP*EHLKDY
Trigger: ATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCC...ATTTGTATTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CATCCTCCTCTTTCCTATCATGAAGTCACAGACTGTCTCATCAAACTACTTGATAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: HPPLSYHEVTDCLIKLLDNSGLV*DSRCKV
Trigger: TACTTTGCAGCGGCTATCCAACACTAGTCCTGAATT...ATCAAGTAGTTTGATGAGACAGTCTGTGACTTCATGATAGGAAAGAGGAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAACCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATCCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: NTLILVHSLQSSHISSSDPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGAAACTCTGGATCACATaGGTTCTATCTAGACAATCC +
Preference number: 5 (lower is better)
Translates to: WIKALKRPWADVESGSVKKLWIT*VLSRQS
Trigger: GGATTGTCTAGATAGAACCAATGTGATCCAGAGTTT...CTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAAGCACAAGCATTTGCGTaGTCAGCCCAGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKAQAFA*SAQAFL
Trigger: CAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGC...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTGGAATTTCCAGTCCCTaGGAACACTTAAAGGACTAT +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSGISSP*EHLKDY
Trigger: ATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCC...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTAAAATGTTCCAATGCTaGCAACTCCCCAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: RSNTLILVHSLQSSHISSKMFQC*QLPRRA
Trigger: TGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTTT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp CACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAAAATGTTCCAATGCTaGCAACTCCCCAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: HKMCFWIKALKRPWADVEKMFQC*QLPRRA
Trigger: TGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTTT...TTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAGACTCCAGTTCTGCACAATGGAATCTTCCAAGCCAAGCCGCTTTCCACAAACGTTTAAGTTGGTCCTaGATTTGGAGTACTATAACT +
Preference number: 5 (lower is better)
Translates to: KDSSSAQWNLPSQAAFHKRLSWS*IWSTIT
Trigger: AGTTATAGTACTCCAAATCAAGGACCAACTTAAACG...TTTGTGGAAAGCGGCTTGGCTTGGAAGATTCCATTGTGCAGAACTGGAGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TCTCTCATCACACCTAAACTGCTGGTGCACTGGCAGTTCAAGCTGATTAAAGTCATTAGCAGTTCAGATTaGGTCTTTGTTGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SLITPKLLVHWQFKLIKVISSSD*VFVVAV
Trigger: AACAGCTACAACAAAGACCAAATCTGAACTGCTAAT...GACTTTAATCAGCTTGAACTGCCAGTGCACCAGCAGTTTAGGTGTGATGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS GCA 90 bp TCTGTATCAAAGACTCAAGAACTTGGATTTACCGAAAAGTCAATTTaGAGTACCAAAATTACCGAGATTAGCCTCTGGCTGTCGACACTG +
Preference number: 5 (lower is better)
Translates to: SVSKTQELGFTEKSI*STKITEISLWLSTL
Trigger: CAGTGTCGACAGCCAGAGGCTAATCTCGGTAATTTTGGTACTGCAAATTGACTTTTCGGTAAATCCAAGTTCTTGAGTCTTTGATACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTCAAGAGACTCATTTCTaGGAATTCAGGACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTQETHF*EFRTSV
Trigger: AACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTG...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000441228.5
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 5 (lower is better)
Translates to: NTLILVHSLQSSHISSSDTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTATCTGTGGCAGTGGTTaGTACTTGAGGTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFICGSG*YLRFGL
Trigger: AAGACCAAACCTCAAGTACAAACCACTGCCACAGAT...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: RSNTLILVHSLQSSHISSLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ATAAAGGCATTAAAAAGACCTTGGGCTGATGTGGAAAGCGGGTCAGTAAAGACTAAGTTGGTCCTTGATTaGGAGTACTATAACTACCTG +
Preference number: 5 (lower is better)
Translates to: IKALKRPWADVESGSVKTKLVLD*EYYNYL
Trigger: CAGGTAGTTATAGTACTCCAAATCAAGGACCAACTT...AGTCTTTACTGACCCGCTTTCCACATCAGCCCAAGGTCTTTTTAATGCCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGAGCATCGACAAAATCTTTACCAGAAAACAGGTATaGATCCTCGAGTCTGTACAA +
Preference number: 5 (lower is better)
Translates to: NSVYLFFLDQSGSIDKIFTRKQV*ILESVQ
Trigger: TTGTACAGACTCGAGGATCAATACCTGTTTTCTGGT...AAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp ATCCATTATAAGTCCCAAATGAGTTCTCTTTCCAGTTCTGGTAAAGTCAGTCTTATCTGTGGCAGTGGTTaGTACTTGAGGTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: IHYKSQMSSLSSSGKVSLICGSG*YLRFGL
Trigger: AAGACCAAACCTCAAGTACAAACCACTGCCACAGAT...AAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441228.5
ENST00000455997.5
CDS-3UTR CAA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATAAGTTGGTCCTTGATTaGGAGTACTATAACTACCTG +
Preference number: 5 (lower is better)
Translates to: NTLILVHSLQSSHISSSDKLVLD*EYYNYL
Trigger: CAGGTAGTTATAGTACTCCAAATCAAGGACCAACTT...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGCATGGAGCACAAGATGTGCTTTTGGATAAAGGCATTAAAAAGACCTTGGGCTCGTTTAAGTTGGTCCTaGATTTGGAGTACTATAACT +
Preference number: 5 (lower is better)
Translates to: CMEHKMCFWIKALKRPWARLSWS*IWSTIT
Trigger: AGTTATAGTACTCCAAATCAAGGACCAACTTAAACG...AGCCCAAGGTCTTTTTAATGCCTTTATCCAAAAGCACATCTTGTGCTCCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGAGTACCATGCGTGAAAAAGCAGCTGTTACCCTCCAAGTGCAATATGAAATCTCACAACACTGAAATATaGCAGCAGTGTTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: RVPCVKKQLLPSKCNMKSHNTEI*QQCLTE
Trigger: TTCAGTTAAACACTGCTGCAATATTTCAGTGTTGTG...AGATTTCATATTGCACTTGGAGGGTAACAGCTGCTTTTTCACGCATGGTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS TCA 90 bp CCTGGCCAGCAGAGTCCACTTAATTCATCTTGCATTTCTGCTACCTaGTCCAATAAAATACTTAGTCGATCCCATCTCATATTTTTACAT +
Preference number: 5 (lower is better)
Translates to: PGQQSPLNSSCISAT*SNKILSRSHLIFLH
Trigger: ATGTAAAAATATGAGATGGGATCGACTAAGTATTTTATTGGATCAGGTAGCAGAAATGCAAGATGAATTAAGTGGACTCTGCTGGCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CAA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTCCAAGGAAGACACCATaGTTGCAAATGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: THSLIANKILDRVKNIKSPRKTP*LQMSAQ
Trigger: TTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGG...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TGTGGAAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAATTGTTCTTCAAGCTTTaGTCCCACATGCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: CGKVCLLIVTASTMTIMKLFFKL*SHMQNS
Trigger: GGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAA...TTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTTCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTTCAGATCACAACACTGAAATATaGCAGCAGTGTTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: NTLILVHSLQSSHISSSDHNTEI*QQCLTE
Trigger: TTCAGTTAAACACTGCTGCAATATTTCAGTGTTGTG...ATCTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AGATCTAACACACTGATATTAGTCCATTCCCTACAAAGCAGCCACATTAGCAGTATTAGCAGTTCAGATTaGGTCTTTGTTGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RSNTLILVHSLQSSHISSISSSD*VFVVAV
Trigger: AACAGCTACAACAAAGACCAAATCTGAACTGCTAAT...ACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTGTTAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTGGACATCAAAATCTGTaGCTTTCCAGACTACATGAC +
Preference number: 5 (lower is better)
Translates to: THSLIANKILDRVKNIKSGHQNL*LSRLHD
Trigger: GTCATGTAGTCTGGAAAGCAACAGATTTTGATGTCC...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGCAAGAGACTCATTTCTaGGAATTCAGGACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: KSMPANSDRFYNDNNETEQETHF*EFRTSV
Trigger: AACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTG...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp TTAAAACAGAGGCAGCTTTGGACCTCTAGCGTAAGAGATAGACTTTACATTCTTTACCGAAAAGTCAATTaGCAGTACCAAAATTACCGA +
Preference number: 5 (lower is better)
Translates to: LKQRQLWTSSVRDRLYILYRKVN*QYQNYR
Trigger: TCGGTAATTTTGGTACTGCAAATTGACTTTTCGGTA...AAGAATGTAAAGTCTATCTCTTACGCTAGAGGTCCAAAGCTGCCTCTGTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 90 bp ATAACTCTTAACAACCACAGCCTCTGTATCAAAGACTCAAGAACTTaGATTTACCGAAAAGTCAATTTGCAGTACCAAAATTACCGAGAT +
Preference number: 5 (lower is better)
Translates to: ITLNNHSLCIKDSRT*IYRKVNLQYQNYRD
Trigger: ATCTCGGTAATTTTGGTACTGCAAATTGACTTTTCGGTAAATCCAAGTTCTTGAGTCTTTGATACAGAGGCTGTGGTTGTTAAGAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS-3UTR CAA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGCGTTTAAGTTGGTCCTaGATTTGGAGTACTATAACT +
Preference number: 5 (lower is better)
Translates to: KSMPANSDRFYNDNNETERLSWS*IWSTIT
Trigger: AGTTATAGTACTCCAAATCAAGGACCAACTTAAACG...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp AAAAGTATGCCTGCTAATAGTGACCGCTTCTACAATGACAATAATGAAACTGAGATTAGCAGTTCAGATTaGGTCTTTGTTGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: KSMPANSDRFYNDNNETEISSSD*VFVVAV
Trigger: AACAGCTACAACAAAGACCAAATCTGAACTGCTAAT...CTCAGTTTCATTATTGTCATTGTAGAAGCGGTCACTATTAGCAGGCATACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS-3UTR CAA 90 bp ACACATTCATTGATAGCCAACAAAATCCTTGACAGAGTGAAAAACATCAAGAGTCACAACACTGAAATATaGCAGCAGTGTTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: THSLIANKILDRVKNIKSHNTEI*QQCLTE
Trigger: TTCAGTTAAACACTGCTGCAATATTTCAGTGTTGTG...ACTCTTGATGTTTTTCACTCTGTCAAGGATTTTGTTGGCTATCAATGAATGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389061.10
ENST00000455997.5
ENST00000672477.1
CDS CCA 72 bp TGGAGAAAGGCCGGCGAGCCGCTGGTTCCCGGCCTATaGCTACTCGGGCGAGGCCTAGGAGAGGCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: WRKAGEPLVPGL*LLGRGLGEAAP
Trigger: CGGCGCGGCCTCTCCTAGGCCTCGCCCGAGTAGCCATAGGCCGGGAACCAGCGGCTCGCCGGCCTTTCTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 72 bp GCACGCGAGAGATGCCGCCGACGCGGCGGGTTGGAGTaGGACGAAGAGCGCCGTGACGAAGCCGCTGCGGAT +
Preference number: 6 (lower is better)
Translates to: ARERCRRRGGLE*DEERRDEAAAD
Trigger: ATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 72 bp GCGCCGCCACCTCGGCTACAACTCTACCGGTCACCCTaGCACAGCGGCCGCAGCTCCCAGCCTCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: APPPRLQLYRSP*HSGRSSQPLPT
Trigger: GGTGGGAAGAGGCTGGGAGCTGCGGCCGCTGTGCCAGGGTGACCGGTAGAGTTGTAGCCGAGGTGGCGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418611.5
ENST00000455997.5
ENST00000463237.5
ENST00000672477.1
CDS CCA 72 bp TCTCTCTTCAGCCGTGGGCGCTGGGGCCGAGCACGGTaGAGAAAGGCCGGCGAGCCGCTGGTTCCCGGCCTA +
Preference number: 6 (lower is better)
Translates to: SLFSRGRWGRAR*RKAGEPLVPGL
Trigger: TAGGCCGGGAACCAGCGGCTCGCCGGCCTTTCTCCACCGTGCTCGGCCCCAGCGCCCACGGCTGAAGAGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS TCA 72 bp CCGACGCGGCGGGTTGGAGTGCGACGAAGAGCGCCGTaGCGAAGCCGCTGCGGATTGGTGGGGCGCGTTTTG +
Preference number: 6 (lower is better)
Translates to: PTRRVGVRRRAP*RSRCGLVGRVL
Trigger: CAAAACGCGCCCCACCAATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 72 bp CAAGAGCACGCGAGAGATGCCGCCGACGCGGCGGGTTaGAGTGCGACGAAGAGCGCCGTGACGAAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: QEHARDAADAAG*SATKSAVTKPL
Trigger: CAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CAA 72 bp GCAAGAGCACGCGAGAGATGCCGCCGACGCGGCGGGTaGGAGTGCGACGAAGAGCGCCGTGACGAAGCCGCT +
Preference number: 6 (lower is better)
Translates to: ARARERCRRRGG*ECDEERRDEAA
Trigger: AGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CAA 90 bp AGTGCGCAAGCAAGAGCACGCGAGAGATGCCGCCGACGCGGCGGGTaGGAGTGCGACGAAGAGCGCCGTGACGAAGCCGCTGCGGATTGG +
Preference number: 6 (lower is better)
Translates to: SAQARARERCRRRGG*ECDEERRDEAAADW
Trigger: CCAATCCGCAGCGGCTTCGTCACGGCGCTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGCTTGCGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 72 bp CTGAAGGGCCGCATCATAACGCCGACCCCGGCTCGGTaGGGGCCAGTCGGCAGCTTCTCTCTTCAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: LKGRIITPTPAR*GPVGSFSLQPW
Trigger: CCACGGCTGAAGAGAGAAGCTGCCGACTGGCCCCCACCGAGCCGGGGTCGGCGTTATGATGCGGCCCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS TCA 72 bp GCTACTCGGGCGAGGCCTAGGAGAGGCCGCGCCGGCTaGGGAAAACCGGTAAATGCGAGGAGCTCCCACACC +
Preference number: 6 (lower is better)
Translates to: ATRARPRRGRAG*GKPVNARSSHT
Trigger: GGTGTGGGAGCTCCTCGCATTTACCGGTTTTCCTCAGCCGGCGCGGCCTCTCCTAGGCCTCGCCCGAGTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CAA 90 bp CTCTCCTGCCCAGGGCAGACTGCAAAGCCTCTCCTGAGGGCACCTTaGCCTTGCAGCCCCCGCACTCCCTTGAGGGATAGCAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: LSCPGQTAKPLLRAP*PCSPRTPLRDSSRT
Trigger: AGTCCTGCTGCTATCCCTCAAGGGAGTGCGGGGGCTGCAAGGCAAAGGTGCCCTCAGGAGAGGCTTTGCAGTCTGCCCTGGGCAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471207.1
CDS GCA 72 bp GGACAAATTAGTGCGCAAGCAAGAGCACGCGAGAGATaGCGCCGACGCGGCGGGTTGGAGTGCGACGAAGAG +
Preference number: 6 (lower is better)
Translates to: GQISAQARARER*RRRGGLECDEE
Trigger: CTCTTCGTCGCACTCCAACCCGCCGCGTCGGCGGCATCTCTCGCGTGCTCTTGCTTGCGCACTAATTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 72 bp CAGACTGCAAAGCCTCTCCTGAGGGCACCTTTGCCTTaGAGCCCCCGCACTCCCTTGAGGGATAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: QTAKPLLRAPLP*SPRTPLRDSSR
Trigger: CCTGCTGCTATCCCTCAAGGGAGTGCGGGGGCTGCAAGGCAAAGGTGCCCTCAGGAGAGGCTTTGCAGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471207.1
CDS GCA 72 bp AAAACCGGTAAATGCGAGGAGCTCCCACACCCTATCTaGAATCCGGGACTCAGAAGCCCTCCCCGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: KTGKCEELPHPI*NPGLRSPPRGQ
Trigger: CTGGCCTCGGGGAGGGCTTCTGAGTCCCGGATTGCAGATAGGGTGTGGGAGCTCCTCGCATTTACCGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CAA 90 bp AAGCCTCTCCTGAGGGCACCTTTGCCTTGCAGCCCCCGCACTCCCTaGAGGGATAGCAGCAGGACTATACTCAGGGAGAGGGTCAGAAGA +
Preference number: 6 (lower is better)
Translates to: KPLLRAPLPCSPRTP*RDSSRTILRERVRR
Trigger: TCTTCTGACCCTCTCCCTGAGTATAGTCCTGCTGCTATCCCTCAAGGGAGTGCGGGGGCTGCAAGGCAAAGGTGCCCTCAGGAGAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471207.1
CDS CCA 72 bp AGGACAGAAGAGGGCGGTGCCTGTGCATGTCTCTCCTaGGTGACTGAAGGGAGTCTCATCCCCAAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: RTEEGGACACLS*VTEGSLIPKGR
Trigger: TCTTCCTTTGGGGATGAGACTCCCTTCAGTCACCCAGGAGAGACATGCACAGGCACCGCCCTCTTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463659.1
CDS GCA 72 bp GTAAAGTCAGTCTTCAAGGCACCAGTTCCCGCATATTaGTTGGCACAAGCATTTGCGTTGTCAGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: VKSVFKAPVPAY*LAQAFALSAQA
Trigger: AGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485311.1
CDS CCA 72 bp CCCTCACCCTCCTCTCCCCAGCCCATGCTACTTCTTTaGGCGCTGCAATTAGTAACAATTTCCAGTTCTTAC +
Preference number: 6 (lower is better)
Translates to: PSPSSPQPMLLL*ALQLVTISSSY
Trigger: GTAAGAACTGGAAATTGTTACTAATTGCAGCGCCCAAAGAAGTAGCATGGGCTGGGGAGAGGAGGGTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463347.5
CDS CAA 72 bp AATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAGAGTCCACTTAATTCA +
Preference number: 6 (lower is better)
Translates to: NPCNCFGTRLPG*PPPGQQSPLNS
Trigger: TGAATTAAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CAA 72 bp AAGTCAGTCTTCAAGGCACCAGTTCCCGCATATTGCTaGGCACAAGCATTTGCGTTGTCAGCCCAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: KSVFKAPVPAYC*AQAFALSAQAV
Trigger: TACAGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485311.1
CDS CCA 72 bp TTTTTCAGGTGTGATATGCCAGATATTCCCAGGCTGTaGCCACCAGATTTTCAAACAGCCCGGAAGCCCGTT +
Preference number: 6 (lower is better)
Translates to: FFRCDMPDIPRL*PPDFQTARKPV
Trigger: AACGGGCTTCCGGGCTGTTTGAAAATCTGGTGGCCACAGCCTGGGAATATCTGGCATATCACACCTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464524.5
CDS CAA 90 bp TCCAGTTCTGGTAAAGTCAGTCTTCAAGGCACCAGTTCCCGCATATaGCTTGGCACAAGCATTTGCGTTGTCAGCCCAGGCTGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSSGKVSLQGTSSRI*LGTSICVVSPGCRK
Trigger: TTTTCTACAGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGTGCCTTGAAGACTGACTTTACCAGAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485311.1
CDS GCA 72 bp CCACTTCCCAAGGAAGACACCATTGTTGCAAATGTCTaGTCAAGTGGCTTCTCCGAGCCCTTCTGGTTAATA +
Preference number: 6 (lower is better)
Translates to: PLPKEDTIVANV*SSGFSEPFWLI
Trigger: TATTAACCAGAAGGGCTCGGAGAAGCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433336.1
CDS CAA 90 bp TATCTAGACAATCCATGCAATTGCTTCGGAACACGCCTTCCTGGTTaGCCACCACCTGGCCAGCAGAGTCCACTTAATTCATCTTGCATT +
Preference number: 6 (lower is better)
Translates to: YLDNPCNCFGTRLPG*PPPGQQSPLNSSCI
Trigger: AATGCAAGATGAATTAAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGCGTGTTCCGAAGCAATTGCATGGATTGTCTAGATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS CCA 72 bp TTTTTCAGGTGTGATATGCCAGATATTCCCAGGCTGTaGCCACCAGATTTTCAAACAGCAGCTTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: FFRCDMPDIPRL*PPDFQTAASAA
Trigger: AGCAGCTGAAGCTGCTGTTTGAAAATCTGGTGGCCACAGCCTGGGAATATCTGGCATATCACACCTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418611.5
ENST00000438671.3
CDS TCA 72 bp TGTGCCCAGTATACCAAATATTGGTCTTGTGACAGCTaGAGGAGGAACATCTTTCTTGACTGCAAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: CAQYTKYWSCDS*RRNIFLDCKGN
Trigger: GTTACCCTTGCAGTCAAGAAAGATGTTCCTCCTTCAGCTGTCACAAGACCAATATTTGGTATACTGGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389061.10
ENST00000418611.5
ENST00000438671.3
ENST00000441228.5
ENST00000445499.2
ENST00000455997.5
ENST00000463237.5
ENST00000463347.5
ENST00000464524.5
ENST00000478586.3
ENST00000672477.1
ENST00000672858.2
CDS CAA 90 bp CTGATCCTTTCCAAGAGACTCATTTCTTGGAATTCAGGACTAGTGTaGGATAGCCGCTGCAAAGTATGGGTCAAATCATATGTTGTTGAA +
Preference number: 6 (lower is better)
Translates to: LILSKRLISWNSGLV*DSRCKVWVKSYVVE
Trigger: TTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTATCCAACACTAGTCCTGAATTCCAAGAAATGAGTCTCTTGGAAAGGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445499.2
CDS CAA 90 bp ATAAAGCTACATGAAGTTACAGAATGTTTACCTCCTTTTCAGTCTTaGCCTACAACAACTTCACTCCTCCAGGGAAAAGATATCCCATGC +
Preference number: 6 (lower is better)
Translates to: IKLHEVTECLPPFQS*PTTTSLLQGKDIPC
Trigger: GCATGGGATATCTTTTCCCTGGAGGAGTGAAGTTGTTGTAGGCAAAGACTGAAAAGGAGGTAAACATTCTGTAACTTCATGTAGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463659.1
CDS GCA 72 bp AAGACTCAAGAACTTGGATTTACCGAAAAGTCAATTTaGAGTACCAAAATTACCGAGATTAGCCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: KTQELGFTEKSI*STKITEISLWL
Trigger: CAGCCAGAGGCTAATCTCGGTAATTTTGGTACTGCAAATTGACTTTTCGGTAAATCCAAGTTCTTGAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455997.5
CDS GCA 72 bp AGAGGATATGAAGTTAAATCTGGTGTTGAGTACCCGTaGATTTCTGTTTTCCCTTCTCTCCATATGAAATTG +
Preference number: 6 (lower is better)
Translates to: RGYEVKSGVEYP*ISVFPSLHMKL
Trigger: CAATTTCATATGGAGAGAAGGGAAAACAGAAATGCACGGGTACTCAACACCAGATTTAACTTCATATCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463347.5
CDS GCA 72 bp ATGAAGTTACAGAATGTTTACCTCCTTTTCAGTCTTTaGCTACAACAACTTCACTCCTCCAGGGAAAAGATA +
Preference number: 6 (lower is better)
Translates to: MKLQNVYLLFSL*LQQLHSSREKI
Trigger: TATCTTTTCCCTGGAGGAGTGAAGTTGTTGTAGGCAAAGACTGAAAAGGAGGTAAACATTCTGTAACTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463659.1
CDS TCA 72 bp CAGAGTCCACTTAATTCATCTTGCATTTCTGCTACCTaGTCCAATAAAATACTTAGTCGATCCCATCTCATA +
Preference number: 6 (lower is better)
Translates to: QSPLNSSCISAT*SNKILSRSHLI
Trigger: TATGAGATGGGATCGACTAAGTATTTTATTGGATCAGGTAGCAGAAATGCAAGATGAATTAAGTGGACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455997.5