Pregenerated sensors for SAAL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166788Ensembl transcript IDs: ENST00000300013.8, ENST00000524803.6, ENST00000528002.1, ENST00000529318.5, ENST00000530180.1, ENST00000530237.1, ENST00000530436.5, ENST00000530736.1, ENST00000531216.1, ENST00000531581.5, ENST00000531751.5, ENST00000532403.1, ENST00000532452.5, ENST00000533851.5
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAATCTTCCACCACAGGGCTATAGAAAGGAAGAAGGTTTTGAAATaGAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCC | + |
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Preference number: 1 (lower is better) Translates to: KIFHHRAIERKKVLK*RGTLLFAQLAFLYS Trigger: GGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAAACCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| 3UTR GCA 72 bp | GAAGAAGGTTTTGAAATGCAGAGGAACACTTCTGTTTaGTCAACTGGCCTTCCTTTACTCCCTGAGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: EEGFEMQRNTSV*STGLPLLPEPP Trigger: CGGTGGCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAAACCTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAGAGGAACACTTCTGTTaGCTCAACTGGCCTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: FSKSSASALSTSRRILIKEEHFC*LNWPSF Trigger: AAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTC...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTGAGCCACCGTCTCCTTaGTTAATGCCTGAAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: SKSSASALSTSRRILIKSEPPSP*LMPEKY Trigger: ATATTTTTCAGGCATTAACAAAGGAGACGGTGGCTC...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGTCGCGTCCCGCGCTTaGAGGCCGTGCCGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPVASRA*RPCRKL Trigger: CAGCTTCCGGCACGGCCTTCAAGCGCGGGACGCGAC...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | AAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGCGGTTGGTCCAGAGGCTaGGCAGCCCCATTTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KCRGTLLFAQLAFLYSLSGWSRG*AAPFLT Trigger: GGTCAGAAATGGGGCTGCTCAGCCTCTGGACCAACC...GCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | AAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGCGTTTGCTGTAGACCGTaGTCCCTATGCAGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KCRGTLLFAQLAFLYSLSVCCRP*SLCSLH Trigger: GTGGAGACTGCATAGGGAGCACGGTCTACAGCAAAC...GCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTAGGGGTTGCGGTCCATaGCTTTGTCGCGTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVRGCGP*LCRVPR Trigger: GCGCGGGACGCGACAAAGTCATGGACCGCAACCCCT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTAGCCGAAACACTGGCTaGTCTTCAGACTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPSRNTG*SSDSSW Trigger: CCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCT...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTTCAGGGCTAACAATCTaGATGAGTCCGCTGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPSGLTI*MSPLRT Trigger: CGTCCTCAGCGGACTCATCCAGATTGTTAGCCCTGA...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTTCAAGCTCCGTCAGCTaGTCCTCATCATCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPSSSVS*SSSSEL Trigger: TAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGA...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTGGTTGGTCCAGAGGCTaGGCAGCCCCATTTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVGWSRG*AAPFLT Trigger: GGTCAGAAATGGGGCTGCTCAGCCTCTGGACCAACC...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAGGTTGGTCCAGAGGCTaGGCAGCCCCATTTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKGWSRG*AAPFLT Trigger: GGTCAGAAATGGGGCTGCTCAGCCTCTGGACCAACC...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | GAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGTCTGTTCTTGAAGAATaGTGGGTGGATCATCAGACT | + |
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Preference number: 4 (lower is better) Translates to: EMQRNTSVCSTGLPLLPESVLEE*WVDHQT Trigger: AGTCTGATGATCCACCCATCATTCTTCAAGAACAGA...CTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTTTTCAACCCAAACACTaGCCACTTCTGCCTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPFQPKH*PLLPGK Trigger: TTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAA...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGGACTGGCAGAATTCATaGCAGACCAGGTCAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKCRGTLLFAQLAFLYSLDWQNS*QTRSKS Trigger: ACTTTTTGACCTGGTCTGCCATGAATTCTGCCAGTC...CAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAACCTTCCTTTACTCCCTaGGCCACCGTCTCCAATTGC | + |
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Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKPSFTP*ATVSNC Trigger: GCAATTGGAGACGGTGGCTCAGGGAGTAAAGGAAGG...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTCAGAACGTACTTGTTTaGCAGCTTCAAGTATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPQNVLV*QLQVYR Trigger: CCTGTATACTTGAAGCTGCCAAACAAGTACGTTCTG...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TTTAATAAAATCTTCCACCACAGGGCTATAGAAAGGAAGAAGGTTTTGAAATGCCGAAGAGCCAGTGTTTaGTGTAGACCGTGCTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: FNKIFHHRAIERKKVLKCRRASV*CRPCSL Trigger: TAGGGAGCACGGTCTACAGCAAACACTGGCTCTTCG...GCATTTCAAAACCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGATTTTATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTAGCCGAAACACTGGCTaGTCTTCAGACTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSSRNTG*SSDSSW Trigger: CCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCT...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR GCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAAGCCGAAACACTGGCTaGTCTTCAGACTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKSRNTG*SSDSSW Trigger: CCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCT...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR GCA 90 bp | TTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGGACAATGTACAATTaGTTGAATTCCATCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LKCRGTLLFAQLAFLYSLRTMYN*LNSIIH Trigger: GTGGATGATGGAATTCAAGCAATTGTACATTGTCCT...CAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTCTGGCCACTTCTGCCTaGGAAAGGCAAGTAAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVLATSA*ERQVSN Trigger: GTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAG...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTCACAAGCCGAAACACTaGCTGCTCTTCAGACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSHKPKH*LLFRLF Trigger: GAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTG...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTCACGTCCTCATCCATTaGCATATCCCATACTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSHVLIH*HIPYSA Trigger: TGCAGAGTATGGGATATGTCAATGGATGAGGACGTG...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TTTAATAAAATCTTCCACCACAGGGCTATAGAAAGGAAGAAGGTTTTGAAATGCAACACTGGCCACTTCTaGCTGGGAAAGGCAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: FNKIFHHRAIERKKVLKCNTGHF*LGKASK Trigger: CTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTT...GCATTTCAAAACCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGATTTTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTAACACTGGCCACTTCTaGCTGGGAAAGGCAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVNTGHF*LGKASK Trigger: CTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTTTTCAACCCAAACACTaGCCACTTCTGCCTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSFQPKH*PLLPGK Trigger: TTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAA...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTCACAAGCCGAAACACTaGCTGCTCTTCAGACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSHKPKH*LLFRLF Trigger: GAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTG...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAGGTGGATCATCAGACTaGCAGAATTCATGGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKGGSSD*QNSWQT Trigger: GGTCTGCCATGAATTCTGCCAGTCTGATGATCCACC...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTGGTGGATCATCAGACTaGCAGAATTCATGGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSGGSSD*QNSWQT Trigger: GGTCTGCCATGAATTCTGCCAGTCTGATGATCCACC...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTGAGCAGCCCCATTTCTaGCCCATTCTAACATTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSEQPHF*PILTLV Trigger: AACTAATGTTAGAATGGGTCAGAAATGGGGCTGCTC...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR GCA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAGCCACCGTCTCCAATTaGTTGAATTCCATCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGATVSN*LNSIIH Trigger: GTGGATGATGGAATTCAAGCAATTGGAGACGGTGGC...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTTAATCGAGGACACTTaGACTTGGCCAGTACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSLIEDT*TWPVLP Trigger: TGGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAA...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR TCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAACAGAGTAGGTGGGTCTaGATCATACAAACAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKQSRWV*IIQTVQ Trigger: TTGCACTGTTTGTATGATTCAGACCCACCTACTCTG...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAGAGCAGCCCCATTTCTaGCCCATTCTAACATTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGEQPHF*PILTLV Trigger: AACTAATGTTAGAATGGGTCAGAAATGGGGCTGCTC...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTGAGCAGCCCCATTTCTaGCCCATTCTAACATTAGTT | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVEQPHF*PILTLV Trigger: AACTAATGTTAGAATGGGTCAGAAATGGGGCTGCTC...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTGACTGGCAGAATTCATaGCAGACCAGGTCAAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVDWQNS*QTRSKS Trigger: ACTTTTTGACCTGGTCTGCCATGAATTCTGCCAGTC...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTTTGAAGAATGATGGGTaGATCATCAGACTGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSLKNDG*IIRLAE Trigger: TTCTGCCAGTCTGATGATCCACCCATCATTCTTCAA...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAATCTGTTCTTGAAGAATaGTGGGTGGATCATCAGACT | + |
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Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWESVLEE*WVDHQT Trigger: AGTCTGATGATCCACCCATCATTCTTCAAGAACAGA...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGATTTGTAAGACCCGAATaGGGCTGTCAATTAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGFVRPE*GCQLEE Trigger: TTCCTCTAATTGACAGCCTCATTCGGGTCTTACAAA...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR GCA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTCAGTGCAATAACACCTaGCCAAGATTTTTATCACTG | + |
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Preference number: 4 (lower is better) Translates to: SKSSASALSTSRRILIKSQCNNT*PRFLSL Trigger: CAGTGATAAAAATCTTGGGCAGGTGTTATTGCACTG...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAATAGCTGGATGTTCCTaGATCCTTTCAACCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGIAGCS*ILSTQT Trigger: TGTTTGGGTTGAAAGGATCCAGGAACATCCAGCTAT...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAATAGCTGGATGTTCCTaGATCCTTTCAACCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEIAGCS*ILSTQT Trigger: TGTTTGGGTTGAAAGGATCCAGGAACATCCAGCTAT...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTATAGCTGGATGTTCCTaGATCCTTTCAACCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVIAGCS*ILSTQT Trigger: TGTTTGGGTTGAAAGGATCCAGGAACATCCAGCTAT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGACAGAACGTACTTGTTTaGCAGCTTCAAGTATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGQNVLV*QLQVYR Trigger: CCTGTATACTTGAAGCTGCCAAACAAGTACGTTCTG...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAACAGAACGTACTTGTTTaGCAGCTTCAAGTATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKQNVLV*QLQVYR Trigger: CCTGTATACTTGAAGCTGCCAAACAAGTACGTTCTG...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTTGAAGAATGATGGGTaGATCATCAGACTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSLKNDG*IIRLAE Trigger: TTCTGCCAGTCTGATGATCCACCCATCATTCTTCAA...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAGATTTTTATCACTGCTaGTGGACACACATATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKDFYHC*WTHISP Trigger: AGGAGATATGTGTGTCCATCAGCAGTGATAAAAATC...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR TCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTGATTTTTATCACTGCTaGTGGACACACATATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSDFYHC*WTHISP Trigger: AGGAGATATGTGTGTCCATCAGCAGTGATAAAAATC...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR TCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAAAAGGAAGAAGGTTTTaGAATGCAGAGGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEKGRRF*NAEEHF Trigger: GAAGTGTTCCTCTGCATTTCAAAACCTTCTTCCTTT...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR GCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAACAGTGCAATAACACCTaGCCAAGATTTTTATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEQCNNT*PRFLSL Trigger: CAGTGATAAAAATCTTGGGCAGGTGTTATTGCACTG...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR GCA 90 bp | TTTAATAAAATCTTCCACCACAGGGCTATAGAAAGGAAGAAGGTTTTGAAATGCGAATCATACAAACAGTaGAATAACACCTGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNKIFHHRAIERKKVLKCESYKQ*NNTCPR Trigger: TCTTGGGCAGGTGTTATTGCACTGTTTGTATGATTC...GCATTTCAAAACCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGATTTTATTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTGAATCATACAAACAGTaGAATAACACCTGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSESYKQ*NNTCPR Trigger: TCTTGGGCAGGTGTTATTGCACTGTTTGTATGATTC...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTGCTATCATAAATAGCTaGATGTTCCTGGATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSAIINS*MFLDPF Trigger: GAAAGGATCCAGGAACATCCAGCTATTTATGATAGC...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAGCTATCATAAATAGCTaGATGTTCCTGGATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKAIINS*MFLDPF Trigger: GAAAGGATCCAGGAACATCCAGCTATTTATGATAGC...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTGCTATCATAAATAGCTaGATGTTCCTGGATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVAIINS*MFLDPF Trigger: GAAAGGATCCAGGAACATCCAGCTATTTATGATAGC...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR TCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAACAATGTACAATTGCTTaGATTCCATCATCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEQCTIA*IPSSTV Trigger: TACAGTGGATGATGGAATTCAAGCAATTGTACATTG...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTCAATGTACAATTGCTTaGATTCCATCATCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVQCTIA*IPSSTV Trigger: TACAGTGGATGATGGAATTCAAGCAATTGTACATTG...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTAGGACAATGTACAATTaGTTGAATTCCATCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVRTMYN*LNSIIH Trigger: GTGGATGATGGAATTCAAGCAATTGTACATTGTCCT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAAACATCAAGCCATTCTaGATTTTCAGAACGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSASALSTSRRILIKNIKPF*IFRTYL Trigger: CAAGTACGTTCTGAAAATCCAGAATGGCTTGATGTT...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTAACATCAAGCCATTCTaGATTTTCAGAACGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSNIKPF*IFRTYL Trigger: CAAGTACGTTCTGAAAATCCAGAATGGCTTGATGTT...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CCA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAAACATCAAGCCATTCTaGATTTTCAGAACGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTEVIPIQVLSLNLQTWENIKPF*IFRTYL Trigger: CAAGTACGTTCTGAAAATCCAGAATGGCTTGATGTT...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS TCA 90 bp | CCTCCTTGTCGCGACCCGGCGGCGGCGGCGAGGGGTTGCGGTCCATaGCTTTGTCGCGTCCCGCGCTTGAAGGCCGTGCCGGAAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPCRDPAAAARGCGP*LCRVPRLKAVPEAA Trigger: CGCAGCTTCCGGCACGGCCTTCAAGCGCGGGACGCGACAAAGTCATGGACCGCAACCCCTCGCCGCCGCCGCCGGGTCGCGACAAGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000529318.5 ENST00000530736.1 ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | GAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGTGTCGCGTCCCGCGCTaGAAGGCCGTGCCGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EMQRNTSVCSTGLPLLPECRVPR*KAVPEA Trigger: AGCTTCCGGCACGGCCTTCAAGCGCGGGACGCGACA...CTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS TCA 90 bp | GGTTACGGAGCAGTTGGCACGTTCCTCCAAAGGGTTTCTGCAGCATaGTGTTCCTGGTTTCCCTCGGAGTCACAAATGCTCAGGGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GYGAVGTFLQRVSAA*CSWFPSESQMLRVH Trigger: GTGTACCCTGAGCATTTGTGACTCCGAGGGAAACCAGGAACATCATGCTGCAGAAACCCTTTGGAGGAACGTGCCAACTGCTCCGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS CCA 90 bp | TACTTGTTTGGCAGCTTCAAGTATACAGGGCACAAGCCGAAACACTaGCTGCTCTTCAGACTCTTCCTGGGGTTGGTCCAGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLFGSFKYTGHKPKH*LLFRLFLGLVQRLS Trigger: GCTCAGCCTCTGGACCAACCCCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTGCCCTGTATACTTGAAGCTGCCAAACAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS GCA 90 bp | AGCTCATGGTTACGGAGCAGTTGGCACGTTCCTCCAAAGGGTTTCTaGAGCATGATGTTCCTGGTTTCCCTCGGAGTCACAAATGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSWLRSSWHVPPKGF*SMMFLVSLGVTNAQ Trigger: CTGAGCATTTGTGACTCCGAGGGAAACCAGGAACATCATGCTGCAGAAACCCTTTGGAGGAACGTGCCAACTGCTCCGTAACCATGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS GCA 90 bp | AGCTGGATGTTCCTGGATCCTTTCAACCCAAACACTGGCCACTTCTaGCTGGGAAAGGCAAGTAAGCAACAACCTGCTTGTTTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWMFLDPFNPNTGHF*LGKASKQQPACFQQ Trigger: CTGCTGGAAACAAGCAGGTTGTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAACATCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | TTTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTAGACTCTTCCTGGGGTaGGTCCAGAGGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FEMQRNTSVCSTGLPLLPRLFLG*VQRLSS Trigger: GCTGCTCAGCCTCTGGACCAACCCCAGGAAGAGTCT...AGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS CCA 90 bp | GGATGTTCCTGGATCCTTTCAACCCAAACACTGGCCACTTCTGCCTaGGAAAGGCAAGTAAGCAACAACCTGCTTGTTTCCAGCAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GCSWILSTQTLATSA*ERQVSNNLLVSSRV Trigger: TACTCTGCTGGAAACAAGCAGGTTGTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS CCA 90 bp | GGATGTTCCTGGATCCTTTCAACCCAAACACTGGCCACTTCTGCCTaGGAAAGGCAAGTAAGCAACAACCTACATGGTAAACGTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCSWILSTQTLATSA*ERQVSNNLHGKRGL Trigger: CAACCCACGTTTACCATGTAGGTTGTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528002.1 ENST00000533851.5 |
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| CDS-3UTR CAA 90 bp | AAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGCCTTAATCGAGGACACTaGGACTTGGCCAGTACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KCRGTLLFAQLAFLYSLSLNRGH*DLASTP Trigger: GGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAAG...GCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | AAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGCTCCAAATCAAAGAGCTaGTCCACAACCTCCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KCRGTLLFAQLAFLYSLSSKSKS*STTSPT Trigger: GGTGGGGGAGGTTGTGGACAAGCTCTTTGATTTGGA...GCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAGGCGGCGGCGAGGGGTaGCGGTCCATGACTTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGGGGEG*RSMTLS Trigger: CGACAAAGTCATGGACCGCAACCCCTCGCCGCCGCC...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTAGACTCTTCCTGGGGTaGGTCCAGAGGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSASALSTSRRILIKSRLFLG*VQRLSS Trigger: GCTGCTCAGCCTCTGGACCAACCCCAGGAAGAGTCT...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS TCA 90 bp | ATTCTCCATTTCTTCATCAAGCTCCGTCAGCTGCTCCTCATCATCTaGGCTAGATTTGGTGTTTTCAGGGCTAACAATCTGGATGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILHFFIKLRQLLLII*ARFGVFRANNLDES Trigger: GGACTCATCCAGATTGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAAATGGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000532452.5 ENST00000533851.5 |
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| CDS-3UTR CAA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGACTCTTCCTGGGGTaGGTCCAGAGGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGRLFLG*VQRLSS Trigger: GCTGCTCAGCCTCTGGACCAACCCCAGGAAGAGTCT...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS GCA 90 bp | TATAGAAAGGAAGAAGGTTTTGAAATGCAGAGGAACACTTCTGTTTaGTCAACTGGCCTTCCTTTACTCCCTGAGCCACCGTCTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: YRKEEGFEMQRNTSV*STGLPLLPEPPSPI Trigger: AATTGGAGACGGTGGCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAAACCTTCTTCCTTTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS GCA 90 bp | GCTCTGCAAATTTCATTCTCCATTTCTTCATCAAGCTCCGTCAGCTaGTCCTCATCATCTGAGCTAGATTTGGTGTTTTCAGGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: ALQISFSISSSSSVS*SSSSELDLVFSGLT Trigger: TGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAAATGGAGAATGAAATTTGCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532452.5 |
||
| CDS GCA 90 bp | TATAGAAAGGAAGAAGGTTTTGAAATGCAGAGGAACACTTCTGTTTaGTCAACTGGCCTTCCTTTACTCCCTGAGCCACCGTCTCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YRKEEGFEMQRNTSV*STGLPLLPEPPSPK Trigger: TTTAGGAGACGGTGGCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAAACCTTCTTCCTTTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530237.1 |
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| CDS-3UTR CAA 90 bp | TTTAATAAAATCTTCCACCACAGGGCTATAGAAAGGAAGAAGGTTTTGAAATGCTTGCGGTCCATGACTTaGTCGCGTCCCGCGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FNKIFHHRAIERKKVLKCLRSMT*SRPALE Trigger: TTCAAGCGCGGGACGCGACAAAGTCATGGACCGCAA...GCATTTCAAAACCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGATTTTATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
||
| CDS-3UTR CAA 90 bp | TTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGTCATCTGAGCTAGATTaGGTGTTTTCAGGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LKCRGTLLFAQLAFLYSLSSELD*VFSGLT Trigger: TGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGA...CAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
||
| CDS GCA 90 bp | ACTCTGCAAATTTCATTCTCCATTTCTTCATCAAGCTCCGTCAGCTaGTCCTCATCATCTGAGCTAGATTTGGTGTTTTCAGGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: TLQISFSISSSSSVS*SSSSELDLVFSGLT Trigger: TGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAAATGGAGAATGAAATTTGCAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000533851.5 |
||
| CDS-3UTR CAA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTCGAGGACACTTGGACTaGGCCAGTACTCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SKSSASALSTSRRILIKSRGHLD*ASTPMN Trigger: ATTCATGGGAGTACTGGCCAAGTCCAAGTGTCCTCG...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531581.5 |
||
| CDS-3UTR CAA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTTCCAAATCAAAGAGCTaGTCCACAACCTCCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSASALSTSRRILIKSSKSKS*STTSPT Trigger: GGTGGGGGAGGTTGTGGACAAGCTCTTTGATTTGGA...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
||
| CDS-3UTR CAA 90 bp | AAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGAGCATTTTCAGAACGTACTaGTTTGGCAGCTTCAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KCRGTLLFAQLAFLYSLSIFRTY*FGSFKY Trigger: ATACTTGAAGCTGCCAAACAAGTACGTTCTGAAAAT...GCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAATCCAAATCAAAGAGCTaGTCCACAACCTCCCCCACC | + |
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Preference number: 5 (lower is better) Translates to: CTEVIPIQVLSLNLQTWESKSKS*STTSPT Trigger: GGTGGGGGAGGTTGTGGACAAGCTCTTTGATTTGGA...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | TTGAAATGCAGAGGAACACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTGACAATGTACAATTGCTaGAATTCCATCATCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: LKCRGTLLFAQLAFLYSLTMYNC*NSIIHC Trigger: ACAGTGGATGATGGAATTCAAGCAATTGTACATTGT...CAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS CCA 90 bp | ACCTGCCCAAGATTTTTATCACTGCTGATGGACACACATATCTCCTaGAAACAGGCCATATTACCTAAAATTCCCACACAGATTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: TCPRFLSLLMDTHIS*KQAILPKIPTQISL Trigger: AAGAGAAATCTGTGTGGGAATTTTAGGTAATATGGCCTGTTTCCAGGAGATATGTGTGTCCATCAGCAGTGATAAAAATCTTGGGCAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000531581.5 ENST00000533851.5 |
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| CDS-3UTR CAA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGACCACGTCCTCATCCATaGACATATCCCATACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGPRPHP*TYPILC Trigger: GCAGAGTATGGGATATGTCAATGGATGAGGACGTGG...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTGAGGAACACTTCTGTTaGCTCAACTGGCCTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSEEHFC*LNWPSF Trigger: AAAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTC...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTAGCCACCGTCTCCAATaGCTTGAATTCCATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVSHRLQ*LEFHHP Trigger: TGGATGATGGAATTCAAGCAATTGGAGACGGTGGCT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS-3UTR CAA 90 bp | TTTTCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAAACCGTCTCCAATTGCTaGAATTCCATCATCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: FSKSSASALSTSRRILIKTVSNC*NSIIHC Trigger: ACAGTGGATGATGGAATTCAAGCAATTGGAGACGGT...TTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS-3UTR CAA 90 bp | TCCAAGTCATCAGCAAGCGCCTTATCAACTTCACGTAGGATTTTAATAAAATCTCAGGACAATGTACAATaGCTTGAATTCCATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: SKSSASALSTSRRILIKSQDNVQ*LEFHHP Trigger: TGGATGATGGAATTCAAGCAATTGTACATTGTCCTG...AGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGAGCCACCGTCTCCTTaGTTAATGCCTGAAAAATAT | + |
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Preference number: 5 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEEPPSP*LMPEKY Trigger: ATATTTTTCAGGCATTAACAAAGGAGACGGTGGCTC...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531581.5 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTCAGGACAATGTACAATaGCTTGAATTCCATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: YRSNSNSGFKSEPSNLGSQDNVQ*LEFHHP Trigger: TGGATGATGGAATTCAAGCAATTGTACATTGTCCTG...ACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | TTGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAATTTTCAGAACGTACTaGTTTGGCAGCTTCAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: LYRSNSNSGFKSEPSNLGIFRTY*FGSFKY Trigger: ATACTTGAAGCTGCCAAACAAGTACGTTCTGAAAAT...TCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | TGTACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAATTTTCAGAACGTACTaGTTTGGCAGCTTCAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: CTEVIPIQVLSLNLQTWEIFRTY*FGSFKY Trigger: ATACTTGAAGCTGCCAAACAAGTACGTTCTGAAAAT...TTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTAATTCCAATTCAGGTTTTAAGTCTGAACCTTCAAACTTGGGAAGTTACAATGTACAATTGCTaGAATTCCATCATCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: TEVIPIQVLSLNLQTWEVTMYNC*NSIIHC Trigger: ACAGTGGATGATGGAATTCAAGCAATTGTACATTGT...AACTTCCCAAGTTTGAAGGTTCAGACTTAAAACCTGAATTGGAATTACTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531581.5 ENST00000531751.5 |
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| CDS TCA 72 bp | CGCGACCCGGCGGCGGCGGCGAGGGGTTGCGGTCCATaGCTTTGTCGCGTCCCGCGCTTGAAGGCCGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RDPAAAARGCGP*LCRVPRLKAVP Trigger: CGGCACGGCCTTCAAGCGCGGGACGCGACAAAGTCATGGACCGCAACCCCTCGCCGCCGCCGCCGGGTCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530736.1 ENST00000531581.5 |
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| CDS CAA 72 bp | CCCGGCGGCGGCGGCGAGGGGTTGCGGTCCATGACTTaGTCGCGTCCCGCGCTTGAAGGCCGTGCCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PGGGGEGLRSMT*SRPALEGRAGS Trigger: GCTTCCGGCACGGCCTTCAAGCGCGGGACGCGACAAAGTCATGGACCGCAACCCCTCGCCGCCGCCGCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530736.1 ENST00000531581.5 |
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| CDS CAA 72 bp | TCCTCCTTGTCGCGACCCGGCGGCGGCGGCGAGGGGTaGCGGTCCATGACTTTGTCGCGTCCCGCGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSLSRPGGGGEG*RSMTLSRPALE Trigger: TTCAAGCGCGGGACGCGACAAAGTCATGGACCGCAACCCCTCGCCGCCGCCGCCGGGTCGCGACAAGGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000533851.5 |
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| CDS GCA 72 bp | CGAAGAGCCAGTGTTTGCTGTAGACCGTGCTCCCTATaGAGTCTCCACCGGCCACCTCCTCCTCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RRASVCCRPCSL*SLHRPPPPPPP Trigger: AGGAGGAGGAGGAGGAGGTGGCCGGTGGAGACTGCATAGGGAGCACGGTCTACAGCAAACACTGGCTCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000532452.5 ENST00000533851.5 |
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| CDS CAA 72 bp | CCGAAACACTGGCTGCTCTTCAGACTCTTCCTGGGGTaGGTCCAGAGGCTGAGCAGCCCCATTTCTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: PKHWLLFRLFLG*VQRLSSPISDP Trigger: TGGGTCAGAAATGGGGCTGCTCAGCCTCTGGACCAACCCCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 ENST00000533851.5 |
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| CDS GCA 72 bp | GCTTCAAGTATACAGGGCACAAGCCGAAACACTGGCTaGTCTTCAGACTCTTCCTGGGGTTGGTCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ASSIQGTSRNTG*SSDSSWGWSRG Trigger: GCCTCTGGACCAACCCCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTGCCCTGTATACTTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS CCA 72 bp | GGCAGCTTCAAGTATACAGGGCACAAGCCGAAACACTaGCTGCTCTTCAGACTCTTCCTGGGGTTGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSFKYTGHKPKH*LLFRLFLGLVQ Trigger: CTGGACCAACCCCAGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTGCCCTGTATACTTGAAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530436.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS TCA 72 bp | GCAGTTGGCACGTTCCTCCAAAGGGTTTCTGCAGCATaGTGTTCCTGGTTTCCCTCGGAGTCACAAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: AVGTFLQRVSAA*CSWFPSESQML Trigger: GAGCATTTGTGACTCCGAGGGAAACCAGGAACATCATGCTGCAGAAACCCTTTGGAGGAACGTGCCAACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS GCA 72 bp | TTACGGAGCAGTTGGCACGTTCCTCCAAAGGGTTTCTaGAGCATGATGTTCCTGGTTTCCCTCGGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LRSSWHVPPKGF*SMMFLVSLGVT Trigger: TGTGACTCCGAGGGAAACCAGGAACATCATGCTGCAGAAACCCTTTGGAGGAACGTGCCAACTGCTCCGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS CAA 72 bp | CCATCAAAGGAGAGCCAGCTCATGGTTACGGAGCAGTaGGCACGTTCCTCCAAAGGGTTTCTGCAGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: PSKESQLMVTEQ*ARSSKGFLQHD Trigger: ATCATGCTGCAGAAACCCTTTGGAGGAACGTGCCAACTGCTCCGTAACCATGAGCTGGCTCTCCTTTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS CAA 90 bp | TCTTCATCAAGCTCCGTCAGCTGCTCCTCATCATCTGAGCTAGATTaGGTGTTTTCAGGGCTAACAATCTGGATGAGTCCGCTGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSVSCSSSSELD*VFSGLTIWMSPLRT Trigger: CGTCCTCAGCGGACTCATCCAGATTGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000532452.5 ENST00000533851.5 |
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| CDS TCA 72 bp | GCAAGTAGGCAACTTCCTGGCAGACCACGTGAAGGGTaGAAGGAGCCACCTCATTACATCTGGATTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ASRQLPGRPREG*KEPPHYIWIFA Trigger: TGCAAAAATCCAGATGTAATGAGGTGGCTCCTTTCACCCTTCACGTGGTCTGCCAGGAAGTTGCCTACTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000532403.1 |
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| CDS GCA 72 bp | TTCCTGGATCCTTTCAACCCAAACACTGGCCACTTCTaGCTGGGAAAGGCAAGTAAGCAACAACCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: FLDPFNPNTGHF*LGKASKQQPAC Trigger: ACAAGCAGGTTGTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000531581.5 ENST00000531751.5 |
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| CDS GCA 72 bp | TTCCTGGATCCTTTCAACCCAAACACTGGCCACTTCTaGCTGGGAAAGGCAAGTAAGCAACAACCTACATGG | + |
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Preference number: 6 (lower is better) Translates to: FLDPFNPNTGHF*LGKASKQQPTW Trigger: CCATGTAGGTTGTTGCTTACTTGCCTTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528002.1 ENST00000533851.5 |
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| CDS TCA 72 bp | CACTTCTGTTTGCTCAACTGGCCTTCCTTTACTCCCTaGGCCACCGTCTCCAATTGCTTGAATTCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: HFCLLNWPSFTP*ATVSNCLNSII Trigger: GATGATGGAATTCAAGCAATTGGAGACGGTGGCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530436.5 |
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| CDS TCA 72 bp | TTCTTCATCAAGCTCCGTCAGCTGCTCCTCATCATCTaGGCTAGATTTGGTGTTTTCAGGGCTAACAATCTG | + |
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Preference number: 6 (lower is better) Translates to: FFIKLRQLLLII*ARFGVFRANNL Trigger: CAGATTGTTAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000532452.5 ENST00000533851.5 |
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| CDS CAA 72 bp | CCCACACAGATTTCTCTTAATCGAGGACACTTGGACTaGGCCAGTACTCCCATGAATATATCAGGAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: PTQISLNRGHLD*ASTPMNISGAL Trigger: TAATGCTCCTGATATATTCATGGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAAGAGAAATCTGTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000531581.5 ENST00000533851.5 |
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| CDS GCA 72 bp | ATTTCATTCTCCATTTCTTCATCAAGCTCCGTCAGCTaGTCCTCATCATCTGAGCTAGATTTGGTGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISFSISSSSSVS*SSSSELDLVFS Trigger: TGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAAATGGAGAATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000530736.1 ENST00000531581.5 ENST00000532452.5 ENST00000533851.5 |
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| CDS CAA 72 bp | AAAATTCCCACACAGATTTCTCTTAATCGAGGACACTaGGACTTGGCCAGTACTCCCATGAATATATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: KIPTQISLNRGH*DLASTPMNISG Trigger: TCCTGATATATTCATGGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAAGAGAAATCTGTGTGGGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000531581.5 ENST00000533851.5 |
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| CDS CAA 90 bp | CCTAAAATTCCCACACAGATTTCTCTTAATCGAGGACACTTGGACTaGGCCAGTACTCCCATGAATATATCAGGAGCATTAAATTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKIPTQISLNRGHLD*ASTPMNISGALNSW Trigger: CCAAGAATTTAATGCTCCTGATATATTCATGGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAAGAGAAATCTGTGTGGGAATTTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300013.8 ENST00000524803.6 ENST00000529318.5 ENST00000530180.1 ENST00000531581.5 ENST00000533851.5 |
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| CDS TCA 72 bp | TTTTCTGACACTGTTCCATATTTTGTAAGACCCGAATaGGGCTGTCAATTAGAGGAAGATTGTACTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSDTVPYFVRPE*GCQLEEDCTCL Trigger: AAGGCAAGTACAATCTTCCTCTAATTGACAGCCTCATTCGGGTCTTACAAAATATGGAACAGTGTCAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529318.5 |
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| CDS CAA 72 bp | ATAAAGTTTGAAGCGTTAAGCAACCCACACTTTCTTTaGCTTATGACATCATCAATACTTCTTTCCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: IKFEALSNPHFL*LMTSSILLSYL Trigger: AAGGTAGGAAAGAAGTATTGATGATGTCATAAGCAAAAGAAAGTGTGGGTTGCTTAACGCTTCAAACTTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531216.1 |
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