Pregenerated sensors for SAA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173432Ensembl transcript IDs: ENST00000356524.9, ENST00000405158.2, ENST00000532858.5, ENST00000649195.1, ENST00000672418.1, ENST00000672662.1, ENST00000672712.1, ENST00000673521.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATTAGATACCCATTGTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTGGCCAAAGAATCTCTaGATATTCTCTCTGGCATCG | + |
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Preference number: 2 (lower is better) Translates to: IRYPLCTLSPLCIPALRAWPKNL*IFSLAS Trigger: CGATGCCAGAGAGAATATCCAGAGATTCTTTGGCCA...GGCCCTCAGGGCAGGGATACAAAGCGGGGAGAGGGTACACAATGGGTATCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649195.1 ENST00000673521.1 |
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| 3UTR-3UTR CAA 90 bp | ATTAGATACCCATTGTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTACCCTCTCCCCGCTTaGTATCCCTGCCCTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: IRYPLCTLSPLCIPALRAYPLPA*YPCPEG Trigger: GCCCTCAGGGCAGGGATACAAAGCGGGGAGAGGGTA...GGCCCTCAGGGCAGGGATACAAAGCGGGGAGAGGGTACACAATGGGTATCTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000356524.9 ENST00000405158.2 ENST00000532858.5 ENST00000649195.1 ENST00000672418.1 ENST00000672662.1 ENST00000672712.1 ENST00000673521.1 |
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| 3UTR-3UTR CAA 90 bp | ATTAGATACCCATTGTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTTTATTAGATACCCATaGTGTACCCTCTCCCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IRYPLCTLSPLCIPALRAFIRYP*CTLSPL Trigger: AAGCGGGGAGAGGGTACACAATGGGTATCTAATAAA...GGCCCTCAGGGCAGGGATACAAAGCGGGGAGAGGGTACACAATGGGTATCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000356524.9 ENST00000405158.2 ENST00000532858.5 ENST00000649195.1 ENST00000672418.1 ENST00000672662.1 ENST00000672712.1 ENST00000673521.1 |
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