RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for S1PR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000213694

Ensembl transcript IDs: ENST00000334490.5, ENST00000358157.3, ENST00000375846.3, ENST00000375850.3, ENST00000375851.7, ENST00000648341.1

Found 878 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGACAGCTTCCATTTCCTGAAGCAGACCCCTGCCCCACTGGCGTaGGAAGGTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCA +
Preference number: 1 (lower is better)
Translates to: LDSFHFLKQTPAPLA*EGEPGQPSASASPS
Trigger: TGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGGAAATGGAAGCTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp CTTCCATTTCCTGAAGCAGACCCCTGCCCCACTGGCGTGGGAAGGTaGGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCT +
Preference number: 1 (lower is better)
Translates to: LPFPEADPCPTGVGR*ARPAVCFCFSFIGS
Trigger: AGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGGAAATGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR GCA 90 bp CCCAAAGCGGCAGTCTCACCTGGTGACTCGGCATGCGTGCCACCTTaGACCATGGACATAGCACACATGGCCTCATGGCAGCATCTGCCT +
Preference number: 1 (lower is better)
Translates to: PKAAVSPGDSACVPP*TMDIAHMASWQHLP
Trigger: AGGCAGATGCTGCCATGAGGCCATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCCGCTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 90 bp CTGTCTTGTGAATCTCTGCTCATTTCCTGGACAGCTTCCATTTCCTaGAGCAGACCCCTGCCCCACTGGCGTGGGAAGGTGAGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: LSCESLLISWTASIS*SRPLPHWRGKVSQA
Trigger: GGCCTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGGAAATGGAAGCTGTCCAGGAAATGAGCAGAGATTCACAAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp CCGGAGATCCTTCCTATCCCTTCCCAAAGCGGCAGTCTCACCTGGTaGCTCGGCATGCGTGCCACCTTGCACCATGGACATAGCACACAT +
Preference number: 1 (lower is better)
Translates to: PEILPIPSQSGSLTW*LGMRATLHHGHSTH
Trigger: ATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCCGCTTTGGGAAGGGATAGGAAGGATCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 90 bp TTCCTATCCCTTCCCAAAGCGGCAGTCTCACCTGGTGACTCGGCATaGGTGCCACCTTGCACCATGGACATAGCACACATGGCCTCATGG +
Preference number: 1 (lower is better)
Translates to: FLSLPKAAVSPGDSA*VPPCTMDIAHMASW
Trigger: CCATGAGGCCATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCCGCTTTGGGAAGGGATAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp ACACTGGGCTGCTCCCACTGCCCACCTCCACGGCACATCCTTGCCTaGTCGTTCCACTCTCTTCCAAGTGCTACACTAACACATCTCCCT +
Preference number: 1 (lower is better)
Translates to: TLGCSHCPPPRHILA*SFHSLPSATLTHLP
Trigger: AGGGAGATGTGTTAGTGTAGCACTTGGAAGAGAGTGGAACGACCAGGCAAGGATGTGCCGTGGAGGTGGGCAGTGGGAGCAGCCCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp GCATGCGTGCCACCTTGCACCATGGACATAGCACACATGGCCTCATaGCAGCATCTGCCTTCTGAATGTACACAGGAGGAGACCGAGGCT +
Preference number: 1 (lower is better)
Translates to: ACVPPCTMDIAHMAS*QHLPSECTQEETEA
Trigger: AGCCTCGGTCTCCTCCTGTGTACATTCAGAAGGCAGATGCTGCCATGAGGCCATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 90 bp CTACCTTCCCCCAACTTCCAAGGAGAAACATTGCTGGGAGGAGGGTaGGCCAGAGAGAGGAGGCCGGATGGATTCCAGATGTGCTTTCTA +
Preference number: 1 (lower is better)
Translates to: LPSPNFQGETLLGGG*ARERRPDGFQMCFL
Trigger: TAGAAAGCACATCTGGAATCCATCCGGCCTCCTCTCTCTGGCTCACCCTCCTCCCAGCAATGTTTCTCCTTGGAAGTTGGGGGAAGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp AAAACACCATTCAGAGGCACACGGAGAGGGTCACACAGCATTGTGTaGCCCACGACCTTCCCTCTCTGTGAACAACAGGGAGGGTGTCTA +
Preference number: 1 (lower is better)
Translates to: KTPFRGTRRGSHSIV*PTTFPLCEQQGGCL
Trigger: TAGACACCCTCCCTGTTGTTCACAGAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTCTCCGTGTGCCTCTGAATGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp ACCATCCTGAGCTTCCAGACTTGTGTGTGGGAAGGCAAGTGCGTCTaGGCCAGGAGGTGTTTGACCGCTTTGCCTGTCCATGAGTCTTTT +
Preference number: 1 (lower is better)
Translates to: TILSFQTCVWEGKCV*ARRCLTALPVHESF
Trigger: AAAAGACTCATGGACAGGCAAAGCGGTCAAACACCTCCTGGCTCAGACGCACTTGCCTTCCCACACACAAGTCTGGAAGCTCAGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 90 bp TCAGAGAGCTTGGCACATTACGGAAGACACAGGAGTACAGACAGCTaGAGGGTAGAGACGCTCCTCCTCATTAGCGGTGGTCTTCTAACC +
Preference number: 1 (lower is better)
Translates to: SESLAHYGRHRSTDS*RVETLLLISGGLLT
Trigger: GGTTAGAAGACCACCGCTAATGAGGAGGAGCGTCTCTACCCTGCAGCTGTCTGTACTCCTGTGTCTTCCGTAATGTGCCAAGCTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 90 bp CTAGATTTCTTGGGTGACCTCGCTCTGCTTTTGGAGACAGTCCATTaGAAAATGCATGCTTCACACACCCAGCTGCACAGGCTTGGCCCA +
Preference number: 1 (lower is better)
Translates to: LDFLGDLALLLETVH*KMHASHTQLHRLGP
Trigger: TGGGCCAAGCCTGTGCAGCTGGGTGTGTGAAGCATGCATTTTGCAATGGACTGTCTCCAAAAGCAGAGCGAGGTCACCCAAGAAATCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 90 bp CAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTATTaGACTGTGGGGACTTCGTCTTCCAGCACCGATTCTGACGGCCCT +
Preference number: 1 (lower is better)
Translates to: QLRTQRTDFPWEPHY*TVGTSSSSTDSDGP
Trigger: AGGGCCGTCAGAATCGGTGCTGGAAGACGAAGTCCCCACAGTGCAATAATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp CATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTaGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACA +
Preference number: 1 (lower is better)
Translates to: HASQCTSLVRLTASR*LFPKSFSITNKAGT
Trigger: TGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp AGAAACATTGCTGGGAGGAGGGTGAGCCAGAGAGAGGAGGCCGGATaGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCTAC +
Preference number: 1 (lower is better)
Translates to: RNIAGRRVSQREEAG*IPDVLSILAIRFLY
Trigger: GTAGAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTCTCTCTGGCTCACCCTCCTCCCAGCAATGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp TCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCTTCTGTAATTTGCAGAAACCTGAAA +
Preference number: 1 (lower is better)
Translates to: SFIGSFFGPSGGTSS*VILAGSSVICRNLK
Trigger: TTTCAGGTTTCTGCAAATTACAGAAGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp CCTAGTGGAAATGGTGGCTGTGGGCTCCCTAGTAGAGTTAATGGATaGAGGCTGAGATACTTAGATACTGCGGACATCAGGGTTATGGAG +
Preference number: 1 (lower is better)
Translates to: PSGNGGCGLPSRVNG*RLRYLDTADIRVME
Trigger: CTCCATAACCCTGATGTCCGCAGTATCTAAGTATCTCAGCCTTCATCCATTAACTCTACTAGGGAGCCCACAGCCACCATTTCCACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp TCACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTaGGAAATAACAACTGTTACAGACAAACCAGGTGAGGGTTTTGTA +
Preference number: 1 (lower is better)
Translates to: SHTQLHRLGPLMQLP*EITTVTDKPGEGFV
Trigger: TACAAAACCCTCACCTGGTTTGTCTGTAACAGTTGTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp TTTCTCCCTTCTCTTCTTCAAAGCATGCAAGTCAGTGCACTTCCCTaGTTAGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCT +
Preference number: 1 (lower is better)
Translates to: FLPSLLQSMQVSALP*LDLLLPGGFSPSPS
Trigger: AGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCATGCTTTGAAGAAGAGAAGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 90 bp AGATCCACTCACTGGGCACCAATCTGCACTGGACAATCTCGTCACTaGTTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGCTTCA +
Preference number: 1 (lower is better)
Translates to: RSTHWAPICTGQSRH*FNPTGLLSLTDTAS
Trigger: TGAAGCTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTCCAGTGCAGATTGGTGCCCAGTGAGTGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp AGTCAGAGGAAGAGAGAGAGAGAGAGAGAGAGAGAGACTGACTATTaGGAGACTCAAAAAGCCCAAAGCCCCTTCTCTAGCTGTTATCTC +
Preference number: 1 (lower is better)
Translates to: SQRKRERERERETDY*ETQKAQSPFSSCYL
Trigger: GAGATAACAGCTAGAGAAGGGGCTTTGGGCTTTTTGAGTCTCCCAATAGTCAGTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp AGTCCATTGCAAAATGCATGCTTCACACACCCAGCTGCACAGGCTTaGCCCATTAATGCAGCTCCCCTGAGAAATAACAACTGTTACAGA +
Preference number: 1 (lower is better)
Translates to: SPLQNACFTHPAAQA*PINAAPLRNNNCYR
Trigger: TCTGTAACAGTTGTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGTGAAGCATGCATTTTGCAATGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 90 bp GAAGACCCCCGCCCACCACCCAGCTCTTCAAGAGACTTAAGTATTTaGTTGTCTGCATCTTCAGTCTTTTCATGTTTACTGAGAGACACT +
Preference number: 1 (lower is better)
Translates to: EDPRPPPSSSRDLSI*LSASSVFSCLLRDT
Trigger: AGTGTCTCTCAGTAAACATGAAAAGACTGAAGATGCAGACAATCAAATACTTAAGTCTCTTGAAGAGCTGGGTGGTGGGCGGGGGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 90 bp AAAGTCTTGTTATTTCAAGGGAGCCTTATGTCATACCACAAATATTaGTACCTCCTAGTGGAAATGGTGGCTGTGGGCTCCCTAGTAGAG +
Preference number: 1 (lower is better)
Translates to: KVLLFQGSLMSYHKY*YLLVEMVAVGSLVE
Trigger: CTCTACTAGGGAGCCCACAGCCACCATTTCCACTAGGAGGTATCAATATTTGTGGTATGACATAAGGCTCCCTTGAAATAACAAGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp TGTCCACCTAGTTCAAAACAATGTCCTTGTACTGGGGGTTCAGTCTaGATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATT +
Preference number: 1 (lower is better)
Translates to: CPPSSKQCPCTGGSV*IHLYNLLPVCCMEI
Trigger: AATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGACTGAACCCCCAGTACAAGGACATTGTTTTGAACTAGGTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 90 bp TGGTTATATACAAAGTCTGTGACTTCTAATGTCCAGATTTTAGAATaGTGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGT +
Preference number: 1 (lower is better)
Translates to: WLYTKSVTSNVQILE*CLILEVSEVQVGVG
Trigger: ACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCATCATTCTAAAATCTGGACATTAGAAGTCACAGACTTTGTATATAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 90 bp GTTCAGTCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATaGAGATTCTATGTAGGTACCACATGGCAAACACCTGCAACACAA +
Preference number: 1 (lower is better)
Translates to: VQSESTCITCYLCVV*RFYVGTTWQTPATQ
Trigger: TTGTGTTGCAGGTGTTTGCCATGTGGTACCTACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGACTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGCGTCACCTCGCTGTGTaGGCTGACCCCAGTCCGGCC +
Preference number: 2 (lower is better)
Translates to: PRASASVNTILSFQTCVWRHLAV*ADPSPA
Trigger: GGCCGGACTGGGGTCAGCTCACACAGCGAGGTGACG...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGCTTTCAGGATGCTGTaGAACTGCCGGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASAFRML*NCRWPQ
Trigger: CTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGGCACCATCCACTGCTTaGGGAGCGGACCGTCACCTC +
Preference number: 2 (lower is better)
Translates to: PRASASVNTILSFQTCVWAPSTA*GADRHL
Trigger: GAGGTGACGGTCCGCTCCTCAAGCAGTGGATGGTGC...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTCACACAGCATTGTGTaGCCCACGACCTTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSHSIV*PTTFPL
Trigger: GAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGGAGCCAGGAGGTGTTTaGCCGCTTTGCCTGTCCATG +
Preference number: 2 (lower is better)
Translates to: PRASASVNTILSFQTCVWEPGGV*PLCLSM
Trigger: CATGGACAGGCAAAGCGGTCAAACACCTCCTGGCTC...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACCTGAAGCAGACCCCTaGCCCACTGGCGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLPEADP*PTGVGR
Trigger: CCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCGAGCTGGGAAGGGGCTaGGCCGGTGTCCGTGCCATC +
Preference number: 2 (lower is better)
Translates to: LLISGGLLTNTDADTGLLELGRG*AGVRAI
Trigger: GATGGCACGGACACCGGCCCAGCCCCTTCCCAGCTC...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGCAGAAGGCAGTGGATaGTGTCAGCAGCTTAGTACA +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASAEGSG*CQQLST
Trigger: TGTACTAAGCTGCTGACATCATCCACTGCCTTCTGC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAAGAGACATCCACACTaGGCAGGCTGTTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASKRHPH*AGCWSK
Trigger: CTTTGACCAACAGCCTGCCCAGTGTGGATGTCTCTT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCTCTGGAGCCCAAAGTaGACAAGGCACGTTGTTTAC +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASLWSPK*TRHVVY
Trigger: GTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTCAGACCCACACATCTaGGGCCAGCCTTGGACAAGC +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSDPHI*GQPWTS
Trigger: GCTTGTCCAAGGCTGGCCCCAGATGTGTGGGTCTGA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGACACAGGGCTGGTGTaGGTCAGACCCACACATCTG +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLDTGLV*VRPTHL
Trigger: CAGATGTGTGGGTCTGACCCACACCAGCCCTGTGTC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGACCTTCCCTCTCTGTaGACAACAGGGAGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWDLPSL*TTGRVS
Trigger: AGACACCCTCCCTGTTGTTCACAGAGAGGGAAGGTC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCAGGGACAAATGACTaGAAGGACAGGACACAGGGC +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLAGTND*KDRTQG
Trigger: GCCCTGTGTCCTGTCCTTTCAGTCATTTGTCCCTGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGCAGGGACAAATGACTaGAAGGACAGGACACAGGGC +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWAGTND*KDRTQG
Trigger: GCCCTGTGTCCTGTCCTTTCAGTCATTTGTCCCTGC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCCGGCCTGTGAGCAGTaGAGATCCACTCACTGGGCA +
Preference number: 2 (lower is better)
Translates to: TLLLISGGLLTNTDADTGPACEQ*RSTHWA
Trigger: TGCCCAGTGAGTGGATCTTCACTGCTCACAGGCCGG...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGAGGGTGTCTAGGATaGAGCAGAAGGCAGTGGATG +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGGCLG*SRRQWM
Trigger: CATCCACTGCCTTCTGCTGCATCCTAGACACCCTCC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGGAGGGTGTCTAGGATaGAGCAGAAGGCAGTGGATG +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLGGCLG*SRRQWM
Trigger: CATCCACTGCCTTCTGCTGCATCCTAGACACCCTCC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCCCTGGTGACTCGGCATaGGTGCCACCTTGCACCATG +
Preference number: 2 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGPGDSA*VPPCTM
Trigger: CATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGG...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATCCGGCCCCGAGCATCTaGCTCCGTGAACACCATCCT +
Preference number: 2 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYPAPSI*LREHHP
Trigger: AGGATGGTGTTCACGGAGGCAGATGCTCGGGGCCGG...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGGGTGGTGATTCCTTaGGCCCCCTCTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGVVIP*APSVRD
Trigger: GTCTCTTACAGAGGGGGCCCAAGGAATCACCACCCC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CAA 90 bp TCATCAAAACACCATTCAGAGGCACACGGAGAGGGTCACACAGCATaGTGTGGCCCACGACCTTCCCTCTCTGTGAACAACAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: SSKHHSEAHGEGHTA*CGPRPSLSVNNREG
Trigger: ACCCTCCCTGTTGTTCACAGAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTCTCCGTGTGCCTCTGAATGGTGTTTTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGAGGTGAGTTACTCTaGACCTATGAAAATGTCTCT +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGGELL*TYENVS
Trigger: AGAGACATTTTCATAGGTTCAGAGTAACTCACCTCC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGGAAGGCAAGTGCGTCTaGGCCAGGAGGTGTTTGACC +
Preference number: 2 (lower is better)
Translates to: TLLLISGGLLTNTDADTGEGKCV*ARRCLT
Trigger: GGTCAAACACCTCCTGGCTCAGACGCACTTGCCTTC...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATCACACAGCATTGTGTaGCCCACGACCTTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSHSIV*PTTFPL
Trigger: GAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGTTCCTTTGAACGCTaGTTGGTTTTGTCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGSFER*LVLSLF
Trigger: AAACAAGGACAAAACCAACCAGCGTTCAAAGGAACC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCAGAAGGCAGTGGATaGTGTCAGCAGCTTAGTACA +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLAEGSG*CQQLST
Trigger: TGTACTAAGCTGCTGACATCATCCACTGCCTTCTGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGAGAGAGAGAGAGACTaGCTATTGGGAGACTCAAAA +
Preference number: 2 (lower is better)
Translates to: APSICLREHHPELPDLCVERERD*LLGDSK
Trigger: TTTTGAGTCTCCCAATAGTCAGTCTCTCTCTCTCTC...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAAGAGACATCCACACTaGGCAGGCTGTTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLKRHPH*AGCWSK
Trigger: CTTTGACCAACAGCCTGCCCAGTGTGGATGTCTCTT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGCTCCCCTTTCCTTATTaGAAGGGTCAAAACGAAGTG +
Preference number: 2 (lower is better)
Translates to: PRASASVNTILSFQTCVWLPFPY*KGQNEV
Trigger: CACTTCGTTTTGACCCTTCCAATAAGGAAAGGGGAG...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAAACCAACACCAGCCCTaGGCATGGCCAGCTATCCTT +
Preference number: 2 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGNQHQP*AWPAIL
Trigger: AAGGATAGCTGGCCATGCCCAGGGCTGGTGTTGGTT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CAA 90 bp TTAGTACATCTGAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTaGTTTACACTGAAGCGGGGTGGTGATTCCTTGGGCCCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LVHLKDSGAQSGQGT*FTLKRGGDSLGPLC
Trigger: ACAGAGGGGGCCCAAGGAATCACCACCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTCAGATGTACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGACTGGGGGTTCAGTCTaGATCCACTTGTATAACCTG +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWTGGSV*IHLYNL
Trigger: CAGGTTATACAAGTGGATTCAGACTGAACCCCCAGT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTTACGCAGGGACAAATaGCTGAAAGGACAGGACACA +
Preference number: 2 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLLRRDK*LKGQDT
Trigger: TGTGTCCTGTCCTTTCAGTCATTTGTCCCTGCGTAA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTTACGCAGGGACAAATaGCTGAAAGGACAGGACACA +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWLRRDK*LKGQDT
Trigger: TGTGTCCTGTCCTTTCAGTCATTTGTCCCTGCGTAA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTATGCTACTTTTCATTaGTGTCAAGAAGGCAACAGA +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASYATFH*CQEGNR
Trigger: TCTGTTGCCTTCTTGACATCAATGAAAAGTAGCATA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCTGAAGCAGACCCCTaGCCCACTGGCGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPEADP*PTGVGR
Trigger: CCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGACATCTGAAAGACTCTaGAGCCCAAAGTGGACAAGG +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWTSERL*SPKWTR
Trigger: CCTTGTCCACTTTGGGCTCCAGAGTCTTTCAGATGT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAATACGTACAATCCTTaGGGAAGAGCATGTACAAAA +
Preference number: 2 (lower is better)
Translates to: AHCNLRLPGLSNSPASASNTYNP*GRACTK
Trigger: TTTTGTACATGCTCTTCCCCAAGGATTGTACGTATT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTACTGAAGCGGGGTGGTaGTTCCTTGGGCCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFTEAGW*FLGPPL
Trigger: CAGAGGGGGCCCAAGGAATCACCACCCCGCTTCAGT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCTGCCTCATGCTCCCATaGCAGCAGAATGTTAGCATG +
Preference number: 2 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGCLMLP*QQNVSM
Trigger: CATGCTAACATTCTGCTGGCATGGGAGCATGAGGCA...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGACCTCATGGCAGCATCTaGCTTCTGAATGTACACAGG +
Preference number: 2 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGPHGSI*LLNVHR
Trigger: CCTGTGTACATTCAGAAGGCAGATGCTGCCATGAGG...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGACCCCTGCCCCACTaGCGTGGGAAGGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTRPLPH*RGKVSQ
Trigger: CTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCGCACACATGGCCTCATaGCAGCATCTGCCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLAHMAS*QHLPSE
Trigger: TTCAGAAGGCAGATGCTGCCATGAGGCCATGTGTGC...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CAA 90 bp ACCACCTCCTCAACCAACACCAGCCCTGGGCATGGCCAGCTATCCTaGTTAGTCATGTATCTGCAGAGCATAATCCTTCCCTTGTACTTT +
Preference number: 2 (lower is better)
Translates to: TTSSTNTSPGHGQLS*LVMYLQSIILPLYF
Trigger: AAAGTACAAGGGAAGGATTATGCTCTGCAGATACATGACTAACAAGGATAGCTGGCCATGCCCAGGGCTGGTGTTGGTTGAGGAGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACAAAGTGCTGTCTTGTaGATCTCTGCTCATTTCCTG +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLQSAVL*ISAHFL
Trigger: CAGGAAATGAGCAGAGATTCACAAGACAGCACTTTG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCGGACAATCTCGTCACTaGTTTAACCCAACTGGCCTA +
Preference number: 2 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSGQSRH*FNPTGL
Trigger: TAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTCC...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGGTGTCCGTGCCATCTaGTTCCAGGATGTCACATTA +
Preference number: 2 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYGVRAI*FQDVTL
Trigger: TAATGTGACATCCTGGAATCAGATGGCACGGACACC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCTGGGAACCTCATTATTaGACTGTGGGGACTTCGTCT +
Preference number: 2 (lower is better)
Translates to: LLISGGLLTNTDADTGLLWEPHY*TVGTSS
Trigger: AGACGAAGTCCCCACAGTGCAATAATGAGGTTCCCA...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAACAATGTCCTTGTACTaGGGGTTCAGTCTGAATCCA +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLTMSLY*GFSLNP
Trigger: TGGATTCAGACTGAACCCCCAGTACAAGGACATTGT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGACAGGACACAGGGCTaGTGTGGGTCAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFDRTQG*CGSDPH
Trigger: GTGTGGGTCTGACCCACACCAGCCCTGTGTCCTGTC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGGTSS*VILAGS
Trigger: AGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACGTCCAGATTTTAGAATaGTGCCTAATTCTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: THPAAQAWPINAAPLRNNVQILE*CLILEV
Trigger: GACCTCCAGAATTAGGCATCATTCTAAAATCTGGAC...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGCTCTTCTGTAATTTaGAGAAACCTGAAAACCATC +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGSSVI*RNLKTI
Trigger: GATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGCCTAGCATTAAGGTCTaGATCCATGAAATAATACTT +
Preference number: 2 (lower is better)
Translates to: PRASASVNTILSFQTCVWPSIKV*IHEIIL
Trigger: AAGTATTATTTCATGGATGCAGACCTTAATGCTAGG...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGTTTTAGAGACAAACTaGCTCATGCTCCCATGCCAG +
Preference number: 2 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYVLETN*LMLPCQ
Trigger: CTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAAC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTACCTGTGTGTTGTATaGAGATTCTATGTAGGTACC +
Preference number: 2 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWYLCVV*RFYVGT
Trigger: GGTACCTACATAGAATCTCCATACAACACACAGGTA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTGGTSS*VILAGS
Trigger: AGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAGACCCCTGCCCCACTaGCGTGGGAAGGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFRPLPH*RGKVSQ
Trigger: CTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCGGCTCTGGTAACACTTaGGAAACAGTACAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSGSGNT*ETVQSP
Trigger: AGGACTTTGTACTGTTTCCCAAGTGTTACCAGAGCC...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CAA 90 bp GTATTTTCCCTTGCTCTAGATTTCTTGGGTGACCTCGCTCTGCTTTaGGAGACAGTCCATTGCAAAATGCATGCTTCACACACCCAGCTG +
Preference number: 2 (lower is better)
Translates to: VFSLALDFLGDLALL*ETVHCKMHASHTQL
Trigger: CAGCTGGGTGTGTGAAGCATGCATTTTGCAATGGACTGTCTCCAAAAGCAGAGCGAGGTCACCCAAGAAATCTAGAGCAAGGGAAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGCTTTCAGGATGCTGTaGAACTGCCGGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTAFRML*NCRWPQ
Trigger: CTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCGGGAAGGAGACTTTATaGCCAGTAGCTATAACAGTA +
Preference number: 2 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGGKETL*PVAITV
Trigger: TACTGTTATAGCTACTGGGCATAAAGTCTCCTTCCC...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGACGTACTGATTTTCCGTaGGAACCTCATTATTGCACT +
Preference number: 2 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGRTDFP*EPHYCT
Trigger: AGTGCAATAATGAGGTTCCCACGGAAAATCAGTACG...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGCACGTTGTTTACACTaGAGCGGGGTGGTGATTCCT +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFARCLH*SGVVIP
Trigger: AGGAATCACCACCCCGCTTCAGTGTAAACAACGTGC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATCCTTCGGCCACTATGTaGAGTTTCTTCTATAGGAAA +
Preference number: 2 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYPSATM*SFFYRK
Trigger: TTTCCTATAGAAGAAACTTCACATAGTGGCCGAAGG...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAACATAGAATCAAAGTaGTGTCTTGTGAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLNIESK*CLVNLC
Trigger: GCAGAGATTCACAAGACAGCACTTTGATTCTATGTT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGCCAGCTTTCAGGATaGTGTGAAACTGCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTCQLSG*CETAGG
Trigger: GCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGAAACCTTCTCCATTCTaGTGCTGCTTCATGACAGCA +
Preference number: 2 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEKPSPF*CCFMTA
Trigger: TGCTGTCATGAAGCAGCAGCAGAATGGAGAAGGTTT...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGACCTTCCCTCTCTGTaGACAACAGGGAGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPDLPSL*TTGRVS
Trigger: AGACACCCTCCCTGTTGTTCACAGAGAGGGAAGGTC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCAATACTTTACAGATATaGACACTTCCACAACTCCTC +
Preference number: 2 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSNTLQI*TLPQLL
Trigger: GAGGAGTTGTGGAAGTGTTCATATCTGTAAAGTATT...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCCAGGCCAGCCGTCTaGTTCTGCTTCTCCTTCATA +
Preference number: 2 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPARPAV*FCFSFI
Trigger: TATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAAAGCTCTTTGGGAGGCTaGCACCTTGCCACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQSSLGG*HLATGS
Trigger: AGAACCAGTGGCAAGGTGGCAGCCTCCCAAAGAGCT...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTTCAGACCCACACATCTaGGGCCAGCCTTGGACAAGC +
Preference number: 2 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFSDPHI*GQPWTS
Trigger: GCTTGTCCAAGGCTGGCCCCAGATGTGTGGGTCTGA...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACATAGGCTCTTTCTTTaGCCCATCTGGGGGCACAAG +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTHRLFL*PIWGHK
Trigger: CTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCAACAGTACAAAGTCCTaGCAGTTAAAGGGTTCTACA +
Preference number: 2 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLNSTKS*QLKGST
Trigger: TGTAGAACCCTTTAACTGCCAGGACTTTGTACTGTT...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCACGTTGTTTACACTaGAGCGGGGTGGTGATTCCT +
Preference number: 2 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPARCLH*SGVVIP
Trigger: AGGAATCACCACCCCGCTTCAGTGTAAACAACGTGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGATGGGAGGTTCCTTTaGACGCTGGTTGGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTDGRFL*TLVGFV
Trigger: GACAAAACCAACCAGCGTTCAAAGGAACCTCCCATC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGATAGTCACGATCAGTaGCAGCTTTCAGGATGCTGT +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFDSHDQ*QLSGCC
Trigger: ACAGCATCCTGAAAGCTGGCACTGATCGTGACTATC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAGAAGGCAACAGAAATaGTCCTGGGGAAGATCTCCT +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFRRQQK*SWGRSP
Trigger: AGGAGATCTTCCCCAGGAGCATTTCTGTTGCCTTCT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACATAGGCTCTTTCTTTaGCCCATCTGGGGGCACAAG +
Preference number: 2 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPHRLFL*PIWGHK
Trigger: CTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAAAGACAAACTGCCTCATaGTCCCATGCCAGCAGAATG +
Preference number: 2 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQRQTAS*SHASRM
Trigger: CATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCT...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGAAAGAAATATACCATTaGGAGTGTCCAAAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEKEIYH*ECPKPE
Trigger: TTCTGGCTTTGGACACTCCCAATGGTATATTTCTTT...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGATTTTTCAAGATTGTaGCATGCTCAAATTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYDFSRL*HAQILL
Trigger: AAGGAGAATTTGAGCATGCCACAATCTTGAAAAATC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CAA 90 bp AAAAGTCTTGTTATTTCAAGGGAGCCTTATGTCATACCACAAATATaGATACCTCCTAGTGGAAATGGTGGCTGTGGGCTCCCTAGTAGA +
Preference number: 2 (lower is better)
Translates to: KSLVISREPYVIPQI*IPPSGNGGCGLPSR
Trigger: TCTACTAGGGAGCCCACAGCCACCATTTCCACTAGGAGGTATCAATATTTGTGGTATGACATAAGGCTCCCTTGAAATAACAAGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACAAAGTGCTGTCTTGTaGATCTCTGCTCATTTCCTG +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTQSAVL*ISAHFL
Trigger: CAGGAAATGAGCAGAGATTCACAAGACAGCACTTTG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR TCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTAACGAACACAACGTACTaGTTTTCCGTGGGAACCTCA +
Preference number: 2 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLTNTTY*FSVGTS
Trigger: TGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGT...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTGTCTTGTGAATCTCTaGTCATTTCCTGGACAGCTT +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFCLVNL*SFPGQL
Trigger: AAGCTGTCCAGGAAATGAGCAGAGATTCACAAGACA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTATGTAGGTACCACATaGCAAACACCTGCAACACAA +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFYVGTT*QTPATQ
Trigger: TTGTGTTGCAGGTGTTTGCCATGTGGTACCTACATA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAACTCATTATTGCACTGTaGGGACTTCGTCTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQLIIAL*GLRLPA
Trigger: TGCTGGAAGACGAAGTCCCCACAGTGCAATAATGAG...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGGCGGTTCTTCTTCTATaGCAACAAAGTTATTCAACC +
Preference number: 2 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQAVLLL*QQSYST
Trigger: GGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGC...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGCTCTTCTGTAATTTaGAGAAACCTGAAAACCATC +
Preference number: 2 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGSSVI*RNLKTI
Trigger: GATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGTCTTGTGAATCTCTaGTCATTTCCTGGACAGCTT +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTCLVNL*SFPGQL
Trigger: AAGCTGTCCAGGAAATGAGCAGAGATTCACAAGACA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CCA 90 bp TGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCAAGAGAGACTGACTATTaGGAGACTCAAAAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: CGSSSMATKLFNLALRSARETDY*ETQKAQ
Trigger: TTGGGCTTTTTGAGTCTCCCAATAGTCAGTCTCTCT...TGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATACCTGTGTGTTGTATaGAGATTCTATGTAGGTACC +
Preference number: 2 (lower is better)
Translates to: TIATESSKSPKATHNYNTYLCVV*RFYVGT
Trigger: GGTACCTACATAGAATCTCCATACAACACACAGGTA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAACATAGAATCAAAGTaGTGTCTTGTGAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPNIESK*CLVNLC
Trigger: GCAGAGATTCACAAGACAGCACTTTGATTCTATGTT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR GCA 72 bp GGAGCGGCATCTGCAAGGCCGAAGAGCACCATCCACTaGTTGAGGAGCGGACCGTCACCTCGCTGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: GAASARPKSTIH*LRSGPSPRCVS
Trigger: GCTCACACAGCGAGGTGACGGTCCGCTCCTCAAGCAGTGGATGGTGCTCTTCGGCCTTGCAGATGCCGCTCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp GCAGTCTCACCTGGTGACTCGGCATGCGTGCCACCTTaGACCATGGACATAGCACACATGGCCTCATGGCAG +
Preference number: 3 (lower is better)
Translates to: AVSPGDSACVPP*TMDIAHMASWQ
Trigger: CTGCCATGAGGCCATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGTGGGAGGCTGCCACCTaGCCACTGGTTCTTTGCCTA +
Preference number: 3 (lower is better)
Translates to: APSICLREHHPELPDLCVWEAAT*PLVLCL
Trigger: TAGGCAAAGAACCAGTGGCAAGGTGGCAGCCTCCCA...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGGCATGCGTGCCACCTaGCACCATGGACATAGCACA +
Preference number: 3 (lower is better)
Translates to: APSICLREHHPELPDLCVGMRAT*HHGHST
Trigger: TGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCC...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp CTTCCTATCCCTTCCCAAAGCGGCAGTCTCACCTGGTaGCTCGGCATGCGTGCCACCTTGCACCATGGACAT +
Preference number: 3 (lower is better)
Translates to: LPIPSQSGSLTW*LGMRATLHHGH
Trigger: ATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCCGCTTTGGGAAGGGATAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp CTTCCCAAAGCGGCAGTCTCACCTGGTGACTCGGCATaGGTGCCACCTTGCACCATGGACATAGCACACATG +
Preference number: 3 (lower is better)
Translates to: LPKAAVSPGDSA*VPPCTMDIAHM
Trigger: CATGTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCCGCTTTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 72 bp TTCAGAGGCACACGGAGAGGGTCACACAGCATTGTGTaGCCCACGACCTTCCCTCTCTGTGAACAACAGGGA +
Preference number: 3 (lower is better)
Translates to: FRGTRRGSHSIV*PTTFPLCEQQG
Trigger: TCCCTGTTGTTCACAGAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTCTCCGTGTGCCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CCA 72 bp TGCTCCCACTGCCCACCTCCACGGCACATCCTTGCCTaGTCGTTCCACTCTCTTCCAAGTGCTACACTAACA +
Preference number: 3 (lower is better)
Translates to: CSHCPPPRHILA*SFHSLPSATLT
Trigger: TGTTAGTGTAGCACTTGGAAGAGAGTGGAACGACCAGGCAAGGATGTGCCGTGGAGGTGGGCAGTGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp AGCTTCCAGACTTGTGTGTGGGAAGGCAAGTGCGTCTaGGCCAGGAGGTGTTTGACCGCTTTGCCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: SFQTCVWEGKCV*ARRCLTALPVH
Trigger: ATGGACAGGCAAAGCGGTCAAACACCTCCTGGCTCAGACGCACTTGCCTTCCCACACACAAGTCTGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAGTGGACAAGGCACGTaGTTTACACTGAAGCGGGGT +
Preference number: 3 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSGQGT*FTLKRG
Trigger: ACCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCAGCACCATCCACTGCTaGAGGAGCGGACCGTCACCT +
Preference number: 3 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLSTIHC*RSGPSP
Trigger: AGGTGACGGTCCGCTCCTCAAGCAGTGGATGGTGCT...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp TTGGCACATTACGGAAGACACAGGAGTACAGACAGCTaGAGGGTAGAGACGCTCCTCCTCATTAGCGGTGGT +
Preference number: 3 (lower is better)
Translates to: LAHYGRHRSTDS*RVETLLLISGG
Trigger: ACCACCGCTAATGAGGAGGAGCGTCTCTACCCTGCAGCTGTCTGTACTCCTGTGTCTTCCGTAATGTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 72 bp GGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCTTCTGTAATTTGCAGA +
Preference number: 3 (lower is better)
Translates to: GSFFGPSGGTSS*VILAGSSVICR
Trigger: TCTGCAAATTACAGAAGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CCA 72 bp CCACCTTGCACCATGGACATAGCACACATGGCCTCATaGCAGCATCTGCCTTCTGAATGTACACAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: PPCTMDIAHMAS*QHLPSECTQEE
Trigger: CTCCTCCTGTGTACATTCAGAAGGCAGATGCTGCCATGAGGCCATGTGTGCTATGTCCATGGTGCAAGGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp TTGGGTGACCTCGCTCTGCTTTTGGAGACAGTCCATTaGAAAATGCATGCTTCACACACCCAGCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: LGDLALLLETVH*KMHASHTQLHR
Trigger: CCTGTGCAGCTGGGTGTGTGAAGCATGCATTTTGCAATGGACTGTCTCCAAAAGCAGAGCGAGGTCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGTTAGGGATGAGCTCTTaGGGAGGCTGCCACCTTGCC +
Preference number: 3 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYELGMSS*GGCHLA
Trigger: GGCAAGGTGGCAGCCTCCCAAAGAGCTCATCCCTAA...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGTGGGAACCTCATTATaGCACTGTGGGGACTTCGTC +
Preference number: 3 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYVGTSL*HCGDFV
Trigger: GACGAAGTCCCCACAGTGCAATAATGAGGTTCCCAC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp TTCACTGATAGTCACGATCAGTGCCAGCTTTCAGGATaGTGTGAAACTGCCGGTGGCCACAGCTACTTAGCT +
Preference number: 3 (lower is better)
Translates to: FTDSHDQCQLSG*CETAGGHSYLA
Trigger: AGCTAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATCGTGACTATCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR GCA 72 bp GCTCTTTGGGAGGCTGCCACCTTGCCACTGGTTCTTTaGCTAGGTAGTGACAAGAGATTCTCTGGCATGTTT +
Preference number: 3 (lower is better)
Translates to: ALWEAATLPLVL*LGSDKRFSGMF
Trigger: AAACATGCCAGAGAATCTCTTGTCACTACCTAGGCAAAGAACCAGTGGCAAGGTGGCAGCCTCCCAAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCGGGGTGGTGATTCCTaGGGCCCCCTCTGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFRGGDS*GPLCKR
Trigger: TCTCTTACAGAGGGGGCCCAAGGAATCACCACCCCG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGGCTCCCCTTTCCTTATaGGAAGGGTCAAAACGAAGT +
Preference number: 3 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWAPLSL*EGSKRS
Trigger: ACTTCGTTTTGACCCTTCCAATAAGGAAAGGGGAGC...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGAATATCTGGAAAATTTaGAAGCCAGGAAAATGGAGC +
Preference number: 3 (lower is better)
Translates to: APSICLREHHPELPDLCVNIWKI*KPGKWS
Trigger: GCTCCATTTTCCTGGCTTCAAAATTTTCCAGATATT...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp CTGAGCCAGGAGGTGTTTGACCGCTTTGCCTGTCCATaGGTCTTTTTAAACCTTCTCCATTCTGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: LSQEVFDRFACP*VFLNLLHSAAA
Trigger: AGCAGCAGCAGAATGGAGAAGGTTTAAAAAGACTCATGGACAGGCAAAGCGGTCAAACACCTCCTGGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp CAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTaGGAAATAACAACTGTTACAGACAAACCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: QLHRLGPLMQLP*EITTVTDKPGE
Trigger: CTCACCTGGTTTGTCTGTAACAGTTGTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 72 bp CAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTaGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAG +
Preference number: 3 (lower is better)
Translates to: QCTSLVRLTASR*LFPKSFSITNK
Trigger: CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 72 bp TCTCTTCTTCAAAGCATGCAAGTCAGTGCACTTCCCTaGTTAGACTTACTGCTTCCCGGTGGCTTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: SLLQSMQVSALP*LDLLLPGGFSP
Trigger: TGGGGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCATGCTTTGAAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTGGCTCTTCTGTAATTaGCAGAAACCTGAAAACCAT +
Preference number: 3 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWWLFCN*QKPENH
Trigger: ATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCCA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGCAGCGGTGCGATCTaGGCTCACTGCAATCTCCGC +
Preference number: 3 (lower is better)
Translates to: TIATESSKSPKATHNYNTCSGAI*AHCNLR
Trigger: GCGGAGATTGCAGTGAGCCAAGATCGCACCGCTGCA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATAACCCAACTGGCCTATaGTCTCTTACAGACACAGCT +
Preference number: 3 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYNPTGL*SLTDTA
Trigger: AGCTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTT...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCAGGTGTTTGACCGCTTaGCCTGTCCATGAGTCTTTT +
Preference number: 3 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLRCLTA*PVHESF
Trigger: AAAAGACTCATGGACAGGCAAAGCGGTCAAACACCT...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp AATGGTGGCTGTGGGCTCCCTAGTAGAGTTAATGGATaGAGGCTGAGATACTTAGATACTGCGGACATCAGG +
Preference number: 3 (lower is better)
Translates to: NGGCGLPSRVNG*RLRYLDTADIR
Trigger: CCTGATGTCCGCAGTATCTAAGTATCTCAGCCTTCATCCATTAACTCTACTAGGGAGCCCACAGCCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 72 bp CACTGGGCACCAATCTGCACTGGACAATCTCGTCACTaGTTTAACCCAACTGGCCTATTGTCTCTTACAGAC +
Preference number: 3 (lower is better)
Translates to: HWAPICTGQSRH*FNPTGLLSLTD
Trigger: GTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTCCAGTGCAGATTGGTGCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR GCA 72 bp ACACAACGTACTGATTTTCCGTGGGAACCTCATTATTaGACTGTGGGGACTTCGTCTTCCAGCACCGATTCT +
Preference number: 3 (lower is better)
Translates to: TQRTDFPWEPHY*TVGTSSSSTDS
Trigger: AGAATCGGTGCTGGAAGACGAAGTCCCCACAGTGCAATAATGAGGTTCCCACGGAAAATCAGTACGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGAGGGTCACACAGCATaGTGTGGCCCACGACCTTCC +
Preference number: 3 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPEGHTA*CGPRPS
Trigger: GGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGACAAAGAAATATACCATaGGGAGTGTCCAAAGCCAGA +
Preference number: 3 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGQRNIP*GVSKAR
Trigger: TCTGGCTTTGGACACTCCCAATGGTATATTTCTTTG...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR TCA 72 bp ATACTGCGGACATCAGGGTTATGGAGCAAAGTGTTATaGACAATAGCTACAGAGAGCTCCAAGTCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: ILRTSGLWSKVL*TIATESSKSPK
Trigger: TTTGGGAGACTTGGAGCTCTCTGTAGCTATTGTTCATAACACTTTGCTCCATAACCCTGATGTCCGCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 72 bp TTATTTCAAGGGAGCCTTATGTCATACCACAAATATTaGTACCTCCTAGTGGAAATGGTGGCTGTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LFQGSLMSYHKY*YLLVEMVAVGS
Trigger: GGAGCCCACAGCCACCATTTCCACTAGGAGGTATCAATATTTGTGGTATGACATAAGGCTCCCTTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAGTGGACAAGGCACGTaGTTTACACTGAAGCGGGGT +
Preference number: 3 (lower is better)
Translates to: SESTCITCYLCVVWRFYVSGQGT*FTLKRG
Trigger: ACCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTTCAAAACAATGTCCTaGTACTGGGGGTTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFFKTMS*YWGFSL
Trigger: CAGACTGAACCCCCAGTACAAGGACATTGTTTTGAA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 72 bp AGTTCAAAACAATGTCCTTGTACTGGGGGTTCAGTCTaGATCCACTTGTATAACCTGTTACCTGTGTGTTGT +
Preference number: 3 (lower is better)
Translates to: SSKQCPCTGGSV*IHLYNLLPVCC
Trigger: ACAACACACAGGTAACAGGTTATACAAGTGGATTCAGACTGAACCCCCAGTACAAGGACATTGTTTTGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR TCA 72 bp TGCTTTATTCCAAAAGTAAGTGTCCAGAGCTGGCAGTaGCATTGTAAATTTGATCGCGGCTTAAATTCCACC +
Preference number: 3 (lower is better)
Translates to: CFIPKVSVQSWQ*HCKFDRGLNST
Trigger: GGTGGAATTTAAGCCGCGATCAAATTTACAATGTCACTGCCAGCTCTGGACACTTACTTTTGGAATAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR CCA 72 bp GAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATaGAGATTCTATGTAGGTACCACATGGCAAACACCT +
Preference number: 3 (lower is better)
Translates to: ESTCITCYLCVV*RFYVGTTWQTP
Trigger: AGGTGTTTGCCATGTGGTACCTACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CCA 72 bp TTTTTGCAGACTAGTTTTGCATATATTCAGAGAGCTTaGCACATTACGGAAGACACAGGAGTACAGACAGCT +
Preference number: 3 (lower is better)
Translates to: FLQTSFAYIQRA*HITEDTGVQTA
Trigger: AGCTGTCTGTACTCCTGTGTCTTCCGTAATGTGCCAAGCTCTCTGAATATATGCAAAACTAGTCTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
3UTR-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTATATGCTACTTTTCATaGATGTCAAGAAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFICYFS*MSRRQQ
Trigger: CTGTTGCCTTCTTGACATCAATGAAAAGTAGCATAT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR GCA 72 bp TGCATCTTCAGTCTTTTCATGTTTACTGAGAGACACTaGTTACATCTGAACTTACCTGAGTTCTACTCAATA +
Preference number: 3 (lower is better)
Translates to: CIFSLFMFTERH*LHLNLPEFYSI
Trigger: TATTGAGTAGAACTCAGGTAAGTTCAGATGTAAGCAGTGTCTCTCAGTAAACATGAAAAGACTGAAGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGGTCGAGCGCAGGCTaGATGGGTGAGGCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGSSAG*MGEARA
Trigger: GGCCCGCGCCTCACCCATCCAGCCTGCGCTCGACCC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTGCTCGGTCGCGTCCTaGAGCCGCCTTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASCSVAS*SRLLVP
Trigger: AGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCGCTCGAATGCCAGATaGGCTGGGAGGCCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASRSNAR*AGRPGS
Trigger: ACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCAGACACCGCACTCGTaGGCAGTGAGTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASQTPHS*AVSPEP
Trigger: GGGCTCTGGACTCACTGCTCACGAGTGCGGTGTCTG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCGGGCCTGGGGTCCTaGTCGGTCGCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWPGLGS*SVASCS
Trigger: GCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGACCGCGAGGGCTCTaGCGTTTCCCACACGAACAG +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGPRGL*RFPHEQ
Trigger: CTGTTCGTGTGGGAAACGGCAGAGCCCTCGCGGTCC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCTGCAGCCGCCTTCTaGTCCCTGAGTCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPAAAF*SLSPCC
Trigger: GCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCACGTCGTTCCCGGGCCTaGGGTCCTGCTCGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSRRSRA*GPARSR
Trigger: ACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACG...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTTCCCCCGCACCGGCTaGAGACGCGGCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWFPRTG*RRGGRA
Trigger: TGCCCTCCCGCCGCGTCTCCAGCCGGTGCGGGGGAA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCCGCACTTCCCAGATaGCATCCCCTGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPALPR*HPLDPG
Trigger: GCCTGGATCCAGGGGATGCCATCTGGGAAGTGCGGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGGGTCCTGCGCTCGAATaGCAGATGGGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRASASVNTILSFQTCVWGPALE*QMGWEA
Trigger: GGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACC...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCGGGGCGCCCGGTCCTaGGCTCGAATGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWRGARS*ARMPDG
Trigger: CCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCTGGGAGGCTGACCTaGCCCACCACACAGAGATCA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPGRLT*PTTQRS
Trigger: TGATCTCTGTGTGGTGGGGCAGGTCAGCCTCCCAGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGCAGGGCCCGGGGCCTaGCTCCTCGAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLAGPGA*LLELWL
Trigger: GAGCCACAGCTCGAGGAGGCAGGCCCCGGGCCCTGC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTCTGGGCAGTGCCCATaGAGACACCGCACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSGQCP*RHRTRE
Trigger: CTCACGAGTGCGGTGTCTGCATGGGCACTGCCCAGA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGGTSS*VILAGS
Trigger: AGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCCTCCCATAGCAACTaGGGCCAGAGCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPSHSN*GQSPHH
Trigger: ATGGTGAGGGCTCTGGCCCCAGTTGCTATGGGAGGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGCAGGCCTGGGAGGCTaGCCTGCCCCACCACACAGA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWAGLGG*PAPPHR
Trigger: TCTGTGTGGTGGGGCAGGTCAGCCTCCCAGGCCTGC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCATGCCAGCCCCTGGTaGCTTTTCTCTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASHASPW*LFSEAA
Trigger: TGCAGCCTCAGAGAAAAGTCACCAGGGGCTGGCATG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACCGGGGCGCCCGGTCCTaGGCTCGAATGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNRGARS*ARMPDG
Trigger: CCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCG...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCGTCCCCTCCGGCGCCTaGCTGGTCCCTCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSVPSGA*LVPLRA
Trigger: AGCGCGGAGAGGGACCAGGCAGGCGCCGGAGGGGAC...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGCAGTCTGTGAACAGTaGCCTGTGCCAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASAVCEQ*PVPASS
Trigger: GGAGGATGCTGGCACAGGGCACTGTTCACAGACTGC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAGCCTCCCGAGTAGCTaGGACTACAGGCACGTGCTA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSLPSS*DYRHVL
Trigger: TAGCACGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGACCTTCCCTCTCTGTaGACAACAGGGAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASDLPSL*TTGRVS
Trigger: AGACACCCTCCCTGTTGTTCACAGAGAGGGAAGGTC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCACCTGTCCCCAAGCATaGCCACTACCTGGGATAGGA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASTCPQA*PLPGIG
Trigger: TCCTATCCCAGGTAGTGGTCATGCTTGGGGACAGGT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGTTCCCCTCCGCTCCTaGGGGGTACCAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLVPLRS*GVPATD
Trigger: GTCTGTGGCTGGTACCCCTCAGGAGCGGAGGGGAAC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGCCTGGAACTGCCCTaGCCCTTCCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGCLELP*PFPAAA
Trigger: GGCGGCAGCTGGGAAGGGTCAGGGCAGTTCCAGGCA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGCACCGGCTTGGGCTTaGAGGTGGGCGCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYAPAWA*RWAPGA
Trigger: GGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGCCAGGCCAGCCGTCTaGTTCTGCTTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASARPAV*FCFSFI
Trigger: TATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAACAGTGCGCACCCCTaGAGTGGGGAGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLNSAHP*SGEGTR
Trigger: CCGGGTGCCCTCCCCACTGCAGGGGTGCGCACTGTT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCGCTTGGGCTTGCAGGTaGGCGCCTGGCGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSAWACR*APGAGQ
Trigger: CTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGC...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGGGCCGAGCACCGGCTTaGGCTTGCAGGTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TLLLISGGLLTNTDADTGGRAPA*ACRWAP
Trigger: AGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCC...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAGACCCCTGCCCCACTaGCGTGGGAAGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLRPLPH*RGKVSQ
Trigger: CTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGCTGTAGGTCGGCCTaGCAGAGAGCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGCRSA*QRALRP
Trigger: AGGCCTCAGGGCTCTCTGCCAGGCCGACCTACAGCC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCGTCACCTCGCTGTGTaGGCTGACCCCAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TLLLISGGLLTNTDADTGRHLAV*ADPSPA
Trigger: GGCCGGACTGGGGTCAGCTCACACAGCGAGGTGACG...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAGAAGAGCACGGTGGTaGGCGTGCTGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLRRARW*ACCPRR
Trigger: CCTCCGAGGGCAGCACGCTCACCACCGTGCTCTTCT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTCCGCCTCCCGGGTTTaGGCAACTCTCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSASRV*ATLQPQ
Trigger: CTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATCCCTGAGTCCCTGTTaGCCGTCCCCGGAACCGGCT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSLSPC*PSPEPA
Trigger: AGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR GCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACCTGGGCTGCTCCCACTaGCCACCTCCACGGCACATC +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNLGCSH*PPPRHI
Trigger: GATGTGCCGTGGAGGTGGGCAGTGGGAGCAGCCCAG...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAGGATGGGGCACGCCTaGACCCTGCAGGCCACATCA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLRMGHA*TLQATS
Trigger: TGATGTGGCCTGCAGGGTGCAGGCGTGCCCCATCCT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCTTCGGAGAGTGGCTaGTATTGTTGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPSESG*YCCCCL
Trigger: CAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCCTGAAGCAGACCCCTaGCCCACTGGCGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGPEADP*PTGVGR
Trigger: CCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATCACCCAGGCTGGAGTaGAGCGGTGCGATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSPRLE*SGAIPA
Trigger: AGCCGGGATCGCACCGCTGCACTCCAGCCTGGGTGA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCACAGCGGGAACAGGCTTaGAACCAGGTCCGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSQREQA*NQVRGL
Trigger: CAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTG...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCAGTAAGCTGCAGGTaGACGCCCCAAGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWPVSCR*TPQGPR
Trigger: TCGTGGCCCTTGGGGCGTCCACCTGCAGCTTACTGG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCACCTTACGGCTGCTaGACTTCACCAGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPPYGC*TSPGSR
Trigger: TCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGACATACTGCCCTCCCTaGGGAACCAGACCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLTYCPP*GTRPWE
Trigger: CTCCCACGGTCTGGTTCCTCAGGGAGGGCAGTATGT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGATGGGAGGTTCCTTTaGACGCTGGTTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASDGRFL*TLVGFV
Trigger: GACAAAACCAACCAGCGTTCAAAGGAACCTCCCATC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTCCGCCTCCCGGGTTTaGGCAACTCTCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGSASRV*ATLQPQ
Trigger: CTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGATCACTCATGAGCCATaGCAGGCAGCGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGITHEP*QAAQGP
Trigger: CGGGCCCTGCGCTGCCTGTCATGGCTCATGAGTGAT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCTCCAGCGAGGGCGTTaGAAAAGGGCTCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWLQRGR*KRAPAN
Trigger: GTTGGCAGGAGCCCTTTTTCAACGCCCTCGCTGGAG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCGATGGCCAGTAAGCTaGAGGTGGACGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGRWPVS*RWTPQG
Trigger: CCCTTGGGGCGTCCACCTGCAGCTTACTGGCCATCG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCAGGAAGTAGATGCGTaGGTAGAGGATCACGATGGT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASQEVDA*VEDHDG
Trigger: ACCATCGTGATCCTCTACGCACGCATCTACTTCCTG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTCACCAGGAAGTAGATaGGTGCGTAGAGGATCACGA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSPGSR*VRRGSR
Trigger: TCGTGATCCTCTACGCACGCATCTACTTCCTGGTGA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTGCTTGATTTACTTCTaGTTGGGTCGAGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASCLIYF*LGRAQA
Trigger: AGCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCTGCCCGGCTCACATTaGAACCAGAGGGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLLPGSH*NQRGHH
Trigger: GTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCACCTCCGGTACCACTaGACAGTGCTGATGGGGACC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLHLRYH*TVLMGT
Trigger: GGTCCCCATCAGCACTGTGCAGTGGTACCGGAGGTG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCATCAGGCTGTCTCCTaGCACCTCCGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLHQAVS*HLRYHC
Trigger: GCAGTGGTACCGGAGGTGGCAGGAGACAGCCTGATG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATACCAGGTCCGAGGTCTaGGCTTGGGCGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYTRSEV*AWAGAC
Trigger: ACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGT...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGAATGCCAGATGGGCTaGGAGGCCCGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLECQMG*EARQSQ
Trigger: CTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACATCTCCCTGACCACCTaGGAAGACCCCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNISLTT*EDPRPP
Trigger: TGGTGGGCGGGGGTCTTCCCAGGTGGTCAGGGAGAT...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGATGAGGGGGCTGTGTaGGGCAGGTCTTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLDEGAV*GRSSLT
Trigger: GGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCGTCTGTGCTCTGCCTaGAACTGCCCTGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWRLCSA*NCPDPS
Trigger: GGAAGGGTCAGGGCAGTTCCAGGCAGAGCACAGACG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAAGCGATTTGGTGTCTaGAGTTGCCGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASKRFGV*SCREGK
Trigger: TTTCCCTTCCCGGCAACTCCAGACACCAAATCGCTT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGGCAGTCTCACCTGGTaGCTCGGCATGCGTGCCACC +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYGSLTW*LGMRAT
Trigger: GGTGGCACGCATGCCGAGTCACCAGGTGAGACTGCC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAAAGGGAAGCGGGGCTaGGGTTCCGGCTTCATTCAG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLKGKRG*GSGFIQ
Trigger: CTGAATGAAGCCGGAACCTCAGCCCCGCTTCCCTTT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCTGCGTTCTTGTCCATaGTGCAGGATGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLLRSCP*CRMRGL
Trigger: CAGCCCCCTCATCCTGCATCATGGACAAGAACGCAG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCTTTCAGGATGCTGTaGAACTGCCGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLAFRML*NCRWPQ
Trigger: CTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATTCCCTGAGTCCCTGTTaGCCGTCCCCGGAACCGGCT +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYSLSPC*PSPEPA
Trigger: AGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGA...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCGGCGGGAGGGCAGTTaGCATCACTTGGCATTCACA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWRREGS*HHLAFT
Trigger: TGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCCATTCTGAAGTGCTaGGTTCTTGTCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPILKC*VLVHDA
Trigger: TGCATCATGGACAAGAACGCAGCACTTCAGAATGGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAGCTGGAATGCCAAGTaGTGGCAGAAAGGCTTATGT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSWNAK*WQKGLC
Trigger: ACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTGCATGTCTGGGCAGTaGCCATGCAGACACCGCACT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWCMSGQ*PCRHRT
Trigger: AGTGCGGTGTCTGCATGGGCACTGCCCAGACATGCA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTCGAGGGACCAACAGTaGATGTCTGGGCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSRDQQ*MSGQCP
Trigger: TGGGCACTGCCCAGACATGCACTGTTGGTCCCTCGA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCCCTGCAGCCGCCTTCTaGTCCCTGAGTCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGPAAAF*SLSPCC
Trigger: GCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGG...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTGAGCTGGGAAGGGGCTaGGCCGGTGTCCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECELGRG*AGVRAI
Trigger: GATGGCACGGACACCGGCCCAGCCCCTTCCCAGCTC...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCCGAGTTGTTGTGGTTaGCCACCTTACGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLPSCCG*PPYGCW
Trigger: CCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGGGTGGTGATTCCTTaGGCCCCCTCTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGVVIP*APSVRD
Trigger: GTCTCTTACAGAGGGGGCCCAAGGAATCACCACCCC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTCAGACCCACACATCTaGGGCCAGCCTTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWSDPHI*GQPWTS
Trigger: GCTTGTCCAAGGCTGGCCCCAGATGTGTGGGTCTGA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGGGGGCACAAGCTCCTaGGTGATCTTGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGGGTSS*VILAGS
Trigger: AGAGCCAGCCAAGATCACCCAGGAGCTTGTGCCCCC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
57% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CAA 72 bp CACCATTCAGAGGCACACGGAGAGGGTCACACAGCATaGTGTGGCCCACGACCTTCCCTCTCTGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: HHSEAHGEGHTA*CGPRPSLSVNN
Trigger: GTTGTTCACAGAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTCTCCGTGTGCCTCTGAATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCCCCCAGTCCGGCCTGTaGGCAGTGAAGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSPQSGL*AVKIHS
Trigger: TGAGTGGATCTTCACTGCTCACAGGCCGGACTGGGG...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACGAAGGCAAGTGCGTCTaGGCCAGGAGGTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNEGKCV*ARRCLT
Trigger: GGTCAAACACCTCCTGGCTCAGACGCACTTGCCTTC...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCAAACCAATACAGATGCTaGCACTGGGCTGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSNQYRC*HWAAPT
Trigger: AGTGGGAGCAGCCCAGTGTCAGCATCTGTATTGGTT...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACCGTGGGAGACAGGCTaGACGTCTTCTTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLPWETG*TSSCQT
Trigger: TGTCTGGCAAGAAGACGTTCAGCCTGTCTCCCACGG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCTCTCCCATCACTCATaGGCCATGACAGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGLSHHS*AMTGSA
Trigger: TGCGCTGCCTGTCATGGCTCATGAGTGATGGGAGAG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGACCCTCTGGAGTGCTaGATGCTGTCAAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLDPLEC*MLSKPS
Trigger: GGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACTGTGGGGACTTCGTCTTCCAGCACCGATTCTGACGGCCCTAATTGCCTTGTTCAGATATGGAGGCTGTaGCCCAGGAAACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TVGTSSSSTDSDGPNCLVQIWRL*PRKLRP
Trigger: GGGCCTGAGTTTCCTGGGGCACAGCCTCCATATCTG...AACAAGGCAATTAGGGCCGTCAGAATCGGTGCTGGAAGACGAAGTCCCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTGGCCACCTTACGGCTaGTGGACTTCACCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWWPPYG*WTSPGS
Trigger: ACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTGCCAGCTTTCAGGATaGTGTGAAACTGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLCQLSG*CETAGG
Trigger: GCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTGCCAGCTTTCAGGATaGTGTGAAACTGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWCQLSG*CETAGG
Trigger: GCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATCTCAGGGACACATGTaGTATGCCCGGCATGCACCC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSQGHM*YARHAP
Trigger: GGGTGCATGCCGGGCATAGCACATGTGTCCCTGAGA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCAGGCACCCGCCACCATaGATGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASRHPPP*MANFCI
Trigger: AATACAAAAATTAGCCATGCATGGTGGCGGGTGCCT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCGAATGCCAGATGGGCTaGGAGGCCCGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLECQMG*EARQSQ
Trigger: CTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTC...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCACGCTCCGGGTGCGGTaGAAAAGGCCTCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLTLRVR*KRPPPC
Trigger: ACAGGGAGGAGGCCTTTTCCACCGCACCCGGAGCGT...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCAAAGGAGAAACATTGCTaGGAGGAGGGTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSKEKHC*EEGEPE
Trigger: CTCTGGCTCACCCTCCTCCCAGCAATGTTTCTCCTT...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTTCCCCCGCACCGGCTaGAGACGCGGCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFFPRTG*RRGGRA
Trigger: TGCCCTCCCGCCGCGTCTCCAGCCGGTGCGGGGGAA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCGCTCCGAGTTGTTGTaGTTGGCCACCTTACGGCTG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGRSELL*LATLRL
Trigger: CAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGCAGAGCAGGGCGCATaGAGACGATCAGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWAEQGA*RRSVAE
Trigger: TTCTGCAACTGATCGTCTCCATGCGCCCTGCTCTGC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCAGAGCAGGGCGCATaGAGACGATCAGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLAEQGA*RRSVAE
Trigger: TTCTGCAACTGATCGTCTCCATGCGCCCTGCTCTGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGGAGCTTGGTGGTGTTaGTTGCTCTGGAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGGAWWC*LLWKPR
Trigger: CCGGGGTTTCCAGAGCAACCAACACCACCAAGCTCC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCAGTGTCCTGGAGCTTaGTGGTGTTGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWQCPGA*WCWLLW
Trigger: CCAGAGCAACCAACACCACCAAGCTCCAGGACACTG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGGGTTTCACCATGTTaGCCAGGCTGGGCTCGAACT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGVSPC*PGWART
Trigger: AGTTCGAGCCCAGCCTGGCCAACATGGTGAAACCCC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGCAACCACTGCCTCCTaGGTTCAAGTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWATTAS*VQVLLL
Trigger: CAGCAGAAGCACTTGAACCCAGGAGGCAGTGGTTGC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCGAGCCAGGAGGTGTTTaGCCGCTTTGCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGEPGGV*PLCLSM
Trigger: CATGGACAGGCAAAGCGGTCAAACACCTCCTGGCTC...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAACTAACACATCTCCCTaGCCACCTGGGAAGACCCCC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGTNTSP*PPGKTP
Trigger: GGGGGTCTTCCCAGGTGGTCAGGGAGATGTGTTAGT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCACGTTGTTTACACTaGAGCGGGGTGGTGATTCCT +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLARCLH*SGVVIP
Trigger: AGGAATCACCACCCCGCTTCAGTGTAAACAACGTGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGACCTTCCCTCTCTGTaGACAACAGGGAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGDLPSL*TTGRVS
Trigger: AGACACCCTCCCTGTTGTTCACAGAGAGGGAAGGTC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGACAGCCAGCTATCCATaGCACCACAGTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWTASYP*HHSVLV
Trigger: AACCAGGACACTGTGGTGTCATGGATAGCTGGCTGT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGGCATGGGAGCTGGTaGCCCATTATCCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGHGSW*PIIPVT
Trigger: AGTAACTGGGATAATGGGTCACCAGCTCCCATGCCC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGATGTAAACGCTCCGGGTaGGGTGGAAAAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGCKRSG*GGKGLL
Trigger: GAGGAGGCCTTTTCCACCGCACCCGGAGCGTTTACA...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGCTGGGCCGGTGTCCGTaGCATCTGATTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWLGRCP*HLIPGC
Trigger: ACATCCTGGAATCAGATGGCACGGACACCGGCCCAG...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTCCGGCCCCGAGCATCTaGCTCCGTGAACACCATCCT +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECPAPSI*LREHHP
Trigger: AGGATGGTGTTCACGGAGGCAGATGCTCGGGGCCGG...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGCAGTCCATTGCAAAATaGATGCTTCACACACCCAGC +
Preference number: 4 (lower is better)
Translates to: APSICLREHHPELPDLCVQSIAK*MLHTPS
Trigger: GCTGGGTGTGTGAAGCATGCATTTTGCAATGGACTG...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGGCCACCTTACGGCTaGTGGACTTCACCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGWPPYG*WTSPGS
Trigger: ACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAGCCAGATGTGGACTTaGTCCCGGGAATGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSQMWT*SREWRE
Trigger: TTCTCTCCATTCCCGGGAGCAAGTCCACATCTGGCT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGCCAAATGGATGACCTaGCCGGCTCACATTGCAACC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGAKWMT*PAHIAT
Trigger: GGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCTCTGGAGTGCTGAATaGTGTCAAAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLLWSAE*CQSPPL
Trigger: GAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGCTATGTTGGCCAGGCTaGTCACAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLLCWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGTGACCAGCCTGGCCAACATAG...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTTTGCAGGTGGGCGCCTaGCGCCGGACAGCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECLQVGA*RRTAFL
Trigger: CAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAA...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGTATGAAGACAACCTaGGCCATCAGGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGMKTT*AIRLSP
Trigger: AGGAGACAGCCTGATGGCCCAGGTTGTCTTCATACC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGAAATCAGGTCTGTATaGGCTGTAGGTCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLEIRSV*AVGRPG
Trigger: GCCAGGCCGACCTACAGCCCATACAGACCTGATTTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCCAGATGGCATCCCCTaGATCCAGGCCCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGPDGIP*IQAQKS
Trigger: TGATTTCTGGGCCTGGATCCAGGGGATGCCATCTGG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTCCGGCCTGTGAGCAGTaGAGATCCACTCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECPACEQ*RSTHWA
Trigger: TGCCCAGTGAGTGGATCTTCACTGCTCACAGGCCGG...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GCCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGCGCTTTGCCTGTCCATaGGTCTTTTTAAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: APSICLREHHPELPDLCVRFACP*VFLNLL
Trigger: GAGAAGGTTTAAAAAGACTCATGGACAGGCAAAGCG...CACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGATGGGAGGTTCCTTTaGACGCTGGTTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWDGRFL*TLVGFV
Trigger: GACAAAACCAACCAGCGTTCAAAGGAACCTCCCATC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTGGTTCCAATGTCAGTaGTTCCTGAGGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLWFQCQ*FLRPLF
Trigger: GAAAAGGGGCCTCAGGAATCACTGACATTGGAACCA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGCTTCCCATTCACCTaGGAAGAGACCATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGFPFT*EETMSC
Trigger: GCAAGACATGGTCTCTTCTCAGGTGAATGGGAAGCC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGGGACCTGGATTTTCTaGGATGGCCCCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGGTWIF*DGPLLL
Trigger: AAGAAGCAAGGGGCCATCTCAGAAAATCCAGGTCCC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGAGCATGGGTGCATGTaGGCCAACAGAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLEHGCM*ANRKVA
Trigger: TGCCACTTTTCTGTTGGCTCACATGCACCCATGCTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAACCGGGCCTGGGGTCCTaGTCGGTCGCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQPGLGS*SVASCS
Trigger: GCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGG...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCAAGAGCACCATCCACTaGTTGAGGAGCGGACCGTCA +
Preference number: 4 (lower is better)
Translates to: LLISGGLLTNTDADTGLLKSTIH*LRSGPS
Trigger: TGACGGTCCGCTCCTCAAGCAGTGGATGGTGCTCTT...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGATGCCAAGGTCAGAGGTaGCTACCTTCCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGCQGQR*LPSPNF
Trigger: GAAGTTGGGGGAAGGTAGGCACCTCTGACCTTGGCA...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCTCCACGGCACATCCTTaGCTGGTCGTTCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: LLISGGLLTNTDADTGLLSTAHP*LVVPLS
Trigger: AGAGAGTGGAACGACCAGGCAAGGATGTGCCGTGGA...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGATGCTGACACTGGGCTaGTCCCACTGCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLTASRWLFPKSFSITNKMLTLG*SHCPPP
Trigger: TGGAGGTGGGCAGTGGGAGCAGCCCAGTGTCAGCAT...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTGCTATTGTTGCTGCTaGTTGATTTACTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASCYCCC*LIYFCL
Trigger: CAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACGTCGTTCCCGGGCCTaGGGTCCTGCTCGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRRSRA*GPARSR
Trigger: ACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGAGGCAATGTACTTCTTaGAGTAGAGGGGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLRQCTS*SRGAGW
Trigger: CCATCCTGCCCCTCTACTCCAAGAAGTACATTGCCT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTACCTGTGTGTTGTATaGAGATTCTATGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASYLCVV*RFYVGT
Trigger: GGTACCTACATAGAATCTCCATACAACACACAGGTA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCATAGGCTCTTTCTTTaGCCCATCTGGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGHRLFL*PIWGHK
Trigger: CTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCTATGTTGGCCAGGCTaGTCACAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGLCWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGTGACCAGCCTGGCCAACATAG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGATTGGGGGACACCATaGGAAGCGATTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLDWGTP*EAIWCL
Trigger: CAGACACCAAATCGCTTCCCATGGTGTCCCCCAATC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CCTGACGTGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGGGCGCCTGTCGCCCTaGCAGCGAGGGTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PDVRFFFYGNKVIQPSIKGRLSP*QRGFVW
Trigger: CCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCC...CTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCACGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGGCACCATCCACTGCTTaGGGAGCGGACCGTCACCTC +
Preference number: 4 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQAPSTA*GADRHL
Trigger: GAGGTGACGGTCCGCTCCTCAAGCAGTGGATGGTGC...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCAGACATCAGAATGTTaGCCTTGTAAGCGATGCCGG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGQTSEC*PCKRCR
Trigger: CCGGCATCGCTTACAAGGTCAACATTCTGATGTCTG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACAGACATCAGAATGTTaGCCTTGTAAGCGATGCCGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLQTSEC*PCKRCR
Trigger: CCGGCATCGCTTACAAGGTCAACATTCTGATGTCTG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCAGAAGATCCCATTCTaGAGTGCTGCGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGQKIPF*SAAFLS
Trigger: GGACAAGAACGCAGCACTTCAGAATGGGATCTTCTG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGACTGGGGGTTCAGTCTaGATCCACTTGTATAACCTG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLTGGSV*IHLYNL
Trigger: CAGGTTATACAAGTGGATTCAGACTGAACCCCCAGT...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGTGAAAATGCAATACTaGATGTTTTGGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AHCNLRLPGLSNSPASASVKMQY*MFWLSD
Trigger: ATCAGAGAGCCAAAACATTCAGTATTGCATTTTCAC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGTTTCTGTATCCTCGTaGCCCTCTGGAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLVSVSS*PSGVLN
Trigger: ATTCAGCACTCCAGAGGGTCACGAGGATACAGAAAC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATACAAATCAGTCCCTTaGAGATCCAGGGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLYKSVP*RSRACL
Trigger: CAGGCAAGCCCTGGATCTTCAAGGGACTGATTTGTA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGAGGGAAAGTGGTGAGTaGAGGCCTCAATGGATTCTG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGRESGE*RPQWIL
Trigger: CAGAATCCATTGAGGCCTTCACTCACCACTTTCCCT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTTGCTCGGTCGCGTCCTaGAGCCGCCTTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLICSVAS*SRLLVP
Trigger: AGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCA...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACTGCCTCATGCTCCCATaGCAGCAGAATGTTAGCATG +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNCLMLP*QQNVSM
Trigger: CATGCTAACATTCTGCTGGCATGGGAGCATGAGGCA...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCATTGCCACTGGTTCTTTaGCTAGGTAGTGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSLPLVL*LGSDKR
Trigger: TCTCTTGTCACTACCTAGGCAAAGAACCAGTGGCAA...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATAGCTCTTTGGGAGGCTaGCACCTTGCCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYSSLGG*HLATGS
Trigger: AGAACCAGTGGCAAGGTGGCAGCCTCCCAAAGAGCT...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCGCATGCGTGCCACCTTaGACCATGGACATAGCACAC +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLACVPP*TMDIAH
Trigger: GTGTGCTATGTCCATGGTGCAAGGTGGCACGCATGC...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGTGACTCGGCATGCGTaGCACCTTGCACCATGGACA +
Preference number: 4 (lower is better)
Translates to: RLTASRWLFPKSFSITNKVTRHA*HLAPWT
Trigger: TGTCCATGGTGCAAGGTGGCACGCATGCCGAGTCAC...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGCTTGATTTACTTCTaGTTGGGTCGAGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGCLIYF*LGRAQA
Trigger: AGCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCACTCCCCTTTCCTTATTaGAAGGGTCAAAACGAAGTG +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSLPFPY*KGQNEV
Trigger: CACTTCGTTTTGACCCTTCCAATAAGGAAAGGGGAG...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTTACTGCTTCCCGGTaGCTTTTCCCCAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLLLISGGLLTNTDADTGLTASR*LFPKSF
Trigger: GAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAG...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACGTCAGTGCACTTCCCTaGTTAGACTTACTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNVSALP*LDLLLP
Trigger: GGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGAC...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGCCAGCTGCACAGGCTTaGCCCATTAATGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RLTASRWLFPKSFSITNKPAAQA*PINAAP
Trigger: GGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGG...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCCGGCACATCCTTGCCTaGTCGTTCCACTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLRHILA*SFHSLP
Trigger: TGGAAGAGAGTGGAACGACCAGGCAAGGATGTGCCG...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATTGACCTTCGGAGAGTaGCTGCTATTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLLTFGE*LLLLLL
Trigger: CAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGCTAAGAAACACAGGTaGGTAGCAAGCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWAKKHR*VASLQQ
Trigger: TTGTTGCAGGCTTGCTACCCACCTGTGTTTCTTAGC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGGGAGTCAGTCACTCTaGCGGATTGGTACTAACACT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGGSQSL*RIGTNT
Trigger: AGTGTTAGTACCAATCCGCCAGAGTGACTGACTCCC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACCGCCTTCTGGTCCCTaGGTCCCTGTTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPPPSGP*VPVARP
Trigger: GGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR TCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTACCGCCTTCTGGTCCCTaGGTCCCTGTTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLPPSGP*VPVARP
Trigger: GGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGG...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCGGTGTCCGTGCCATCTaGTTCCAGGATGTCACATTA +
Preference number: 4 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGGVRAI*FQDVTL
Trigger: TAATGTGACATCCTGGAATCAGATGGCACGGACACC...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACAGATTTCCACAGGGATaGATCCACAGGGATGTGGAA +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNRFPQG*IHRDVE
Trigger: TTCCACATCCCTGTGGATTCATCCCTGTGGAAATCT...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCTCCAGCGAGGGCGTTaGAAAAGGGCTCCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFLQRGR*KRAPPS
Trigger: CGACGGAGGAGCCCTTTTTCAACGCCCTCGCTGGAG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGAAGAGCACGGTGGTaGGCGTGCTGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRRARW*ACCPRR
Trigger: CCTCCGAGGGCAGCACGCTCACCACCGTGCTCTTCT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGAGCCAGGTTGCCAATaGAAAAGTACATGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGEPGCQ*KSTCGC
Trigger: ACAACCGCATGTACTTTTTCATTGGCAACCTGGCTC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCGTAAGGCCTCATTTTaGTCATTGTCAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGRKASF*SLSSAA
Trigger: AGCGGCACTTGACAATGATCAAAATGAGGCCTTACG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGGGCAGGTCTTCCTTaGCCTTCGGAGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGAGLP*PSESGC
Trigger: GCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGCCACGGGGGATTACTaGCTTGCTGCTTTTCTAATA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGATGDY*LAAFLI
Trigger: TATTAGAAAAGCAGCAAGTCAGTAATCCCCCGTGGC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATACTTTAGGGGACTCTaGTGGGAGGTTCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLYFRGL*WEVPLN
Trigger: GTTCAAAGGAACCTCCCATCAGAGTCCCCTAAAGTA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGATGGAGAGAAGAGGGTaGATAGACCCACGGCTTATA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGMERRG*IDPRLI
Trigger: TATAAGCCGTGGGTCTATTCACCCTCTTCTCTCCAT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCCACTGGGCACCAATCTaGACTGGACAATCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLHWAPI*TGQSRH
Trigger: GTGACGAGATTGTCCAGTGCAGATTGGTGCCCAGTG...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGAGACAAACTGCCTCATaGTCCCATGCCAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWRQTAS*SHASRM
Trigger: CATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCT...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGATCCCATTCTGAAGTaGTGCGTTCTTGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLDPILK*CVLVHD
Trigger: ATCATGGACAAGAACGCAGCACTTCAGAATGGGATC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGATAGTCACGATCAGTaGCAGCTTTCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGDSHDQ*QLSGCC
Trigger: ACAGCATCCTGAAAGCTGGCACTGATCGTGACTATC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGAGAAGGCAACAGAAATaGTCCTGGGGAAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGRRQQK*SWGRSP
Trigger: AGGAGATCTTCCCCAGGAGCATTTCTGTTGCCTTCT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGTACTAACTCAGCTTaGCTCCTGTGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGCTNSA*LLCLSF
Trigger: GAAACTGAGGCACAGGAGGCAAGCTGAGTTAGTACA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGACAGAACATCAACCTaGAAAAACGGGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGDRTST*KNGTQV
Trigger: GACTTGGGTCCCGTTTTTGCAGGTTGATGTTCTGTC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGAATGTTTCCACAGTCTaGTCTCCTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWNVSTV*SPSQHP
Trigger: GGGGTGTTGGGAAGGAGACCAGACTGTGGAAACATT...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCAGTAAGCTGCAGGTaGACGCCCCAAGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPVSCR*TPQGPR
Trigger: TCGTGGCCCTTGGGGCGTCCACCTGCAGCTTACTGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAACATCTGAAAGACTCTaGAGCCCAAAGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLTSERL*SPKWTR
Trigger: CCTTGTCCACTTTGGGCTCCAGAGTCTTTCAGATGT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAGGCACCAGCAGGCCTaGGAGGCTGACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPRHQQA*EADLPH
Trigger: GTGGGGCAGGTCAGCCTCCCAGGCCTGCTGGTGCCT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGTTAAAAGCATCTCATaGACAAGAGTTCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGVKSIS*TRVPLR
Trigger: GCGGAGGGGAACTCTTGTCCATGAGATGCTTTTAAC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCAAGAGTTAAGTGCTaGGCTAAAGGCCAGATTGAT +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWPRVKC*AKGQID
Trigger: ATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTGG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACAGGGACTTTCACCATaGGTAAGTTCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLQGLSP*VSSQYP
Trigger: AGGGTACTGTGAACTTACCCATGGTGAAAGTCCCTG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGGTGTTGGTTGCTCTaGAAACCCCGGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTWCWLL*KPRGRG
Trigger: CCCCCGCCCCCGGGGTTTCCAGAGCAACCAACACCA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGAGCCAACAGAAAAGTaGCACATTTGGGAACACAGC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGEPTEK*HIWEHS
Trigger: GCTGTGTTCCCAAATGTGCCACTTTTCTGTTGGCTC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGTCCAAGGAAAACGACTaGTGGAACTTCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: TLLLISGGLLTNTDADTGSKEND*WNFSTN
Trigger: GTTCGTGGAGAAGTTCCATCAGTCGTTTTCCTTGGA...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAACGAACACAACGTACTaGTTTTCCGTGGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGTNTTY*FSVGTS
Trigger: TGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGAATACTTTACAGATATaGACACTTCCACAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PRASASVNTILSFQTCVWNTLQI*TLPQLL
Trigger: GAGGAGTTGTGGAAGTGTTCATATCTGTAAAGTATT...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGATTCAGAGGCCCAAAGTaGGTGCTTACTGGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGFRGPK*VLTGLL
Trigger: TAGCAAACCAGTAAGCACTCACTTTGGGCCTCTGAA...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGGGACAATCTCGTCACTaGTTTAACCCAACTGGCCTA +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWGQSRH*FNPTGL
Trigger: TAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTCC...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCATTAATGCAGCTCCCCTaGGAAATAACAACTGTTACA +
Preference number: 4 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSLMQLP*EITTVT
Trigger: TGTAACAGTTGTTATTTCTCAGGGGAGCTGCATTAA...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CCCCGAGCATCTGCCTCCGTGAACACCATCCTGAGCTTCCAGACTTGTGTGTGGGTTCATCCTCCAAACTaGATCAAAACACCAAACATA +
Preference number: 4 (lower is better)
Translates to: PRASASVNTILSFQTCVWVHPPN*IKTPNI
Trigger: TATGTTTGGTGTTTTGATTCAGTTTGGAGGATGAAC...CCACACACAAGTCTGGAAGCTCAGGATGGTGTTCACGGAGGCAGATGCTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAACTGAAGCGGGGTGGTaGTTCCTTGGGCCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTTEAGW*FLGPPL
Trigger: CAGAGGGGGCCCAAGGAATCACCACCCCGCTTCAGT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCAAAGTGCTGTCTTGTaGATCTCTGCTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGQSAVL*ISAHFL
Trigger: CAGGAAATGAGCAGAGATTCACAAGACAGCACTTTG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGGAGGTGAGTTACTCTaGACCTATGAAAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLGGELL*TYENVS
Trigger: AGAGACATTTTCATAGGTTCAGAGTAACTCACCTCC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCAGCATCCTGTACACTaGTGGGTGCTAAAAAGATAC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGQHPVH*WVLKRY
Trigger: GTATCTTTTTAGCACCCATCAGTGTACAGGATGCTG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACCAGCTGCCGCCTCCTaGAGTCACAGAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPPAAAS*SHRGLG
Trigger: CCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCTGG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACGCACTCGTGAGCAGTaGGTCCAGAGCCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRTREQ*VQSPAK
Trigger: CTTCGCTGGGCTCTGGACTCACTGCTCACGAGTGCG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATGTTGGAGAAAGGCATaGAAAACGTGGAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLCWRKA*KTWKYW
Trigger: CCAGTACTTCCACGTTTTTCATGCCTTTCTCCAACA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTAAATGGAGCGGCATCTaGAAGGCCGAAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECKWSGI*KAEEHH
Trigger: ATGGTGCTCTTCGGCCTTGCAGATGCCGCTCCATTT...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCCCATTGCAAAATGCATaGTTCACACACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSPLQNA*FTHPAA
Trigger: TGCAGCTGGGTGTGTGAAGCATGCATTTTGCAATGG...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGCTGCTATTGTTGCTaGTGCTTGATTTACTTCTGC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGCYCC*CLIYFC
Trigger: GCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGAGTGGCTGCTATTGTTaGTGCTGCTTGATTTACTTC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWSGCYC*CCLIYF
Trigger: GAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGAGATACTTAGATACTaGGGACATCAGGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLEILRY*GHQGYG
Trigger: TCCATAACCCTGATGTCCGCAGTATCTAAGTATCTC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGGACACATGTGCTATaGCCGGCATGCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGTHVL*PACTLA
Trigger: TGCCAGGGTGCATGCCGGGCATAGCACATGTGTCCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTACGCTCGAATGCCAGATaGGCTGGGAGGCCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLRSNAR*AGRPGS
Trigger: ACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCG...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCACACATGGCCTCATaGCAGCATCTGCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLTASRWLFPKSFSITNKAHMAS*QHLPSE
Trigger: TTCAGAAGGCAGATGCTGCCATGAGGCCATGTGTGC...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACACCTCGCTCTGCTTTTaGAGACAGTCCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNTSLCF*RQSIAK
Trigger: TTTTGCAATGGACTGTCTCCAAAAGCAGAGCGAGGT...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATAGAGAGGAGGCCGGATaGATTCCAGATGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYREEAG*IPDVLS
Trigger: AGAAAGCACATCTGGAATCCATCCGGCCTCCTCTCT...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTATGTAGGTACCACATaGCAAACACCTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLYVGTT*QTPATQ
Trigger: TTGTGTTGCAGGTGTTTGCCATGTGGTACCTACATA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGGTTCCTTTGAACGCTaGTTGGTTTTGTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLGSFER*LVLSLF
Trigger: AAACAAGGACAAAACCAACCAGCGTTCAAAGGAACC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCAACAGAAATGCTCCTaGGGAAGATCTCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWQQKCS*GRSPYK
Trigger: TTTGTAAGGAGATCTTCCCCAGGAGCATTTCTGTTG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCACGGCAGGAGTGCTaGGCACTGCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPARQEC*ALQAPA
Trigger: TGCTGGTGCCTGCAGTGCCCAGCACTCCTGCCGTGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGCCCGGCATGCACCCTaGCATGAAGCCGGGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFARHAP*HEAGYE
Trigger: TTCATACCCGGCTTCATGCCAGGGTGCATGCCGGGC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATGGAATGCCAAGTGCTaGCAGAAAGGCTTATGTGTT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLWNAKC*QKGLCV
Trigger: AACACATAAGCCTTTCTGCCAGCACTTGGCATTCCA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCGAGAGAGAGAGAGACTaGCTATTGGGAGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSERERD*LLGDSK
Trigger: TTTTGAGTCTCCCAATAGTCAGTCTCTCTCTCTCTC...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCTGCGTTCTTGTCCATaGTGCAGGATGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFLRSCP*CRMRGL
Trigger: CAGCCCCCTCATCCTGCATCATGGACAAGAACGCAG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGGAGCAAAGTGTTATaGACAATAGCTACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGWSKVL*TIATES
Trigger: GCTCTCTGTAGCTATTGTTCATAACACTTTGCTCCA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAACCACTGCACAGTGCTaGTGGGGACCGCGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVTTAQC*WGPRGL
Trigger: GAGCCCTCGCGGTCCCCATCAGCACTGTGCAGTGGT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGTCAGCAGCATTTTCTaGGCATTGAGCTTATCCATT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGVSSIF*ALSLSI
Trigger: AATGGATAAGCTCAATGCTCAGAAAATGCTGCTGAC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGAGAGCCCTGAGGCCTaGCCATGCAGCCATCGAGGG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVESPEA*PCSHRG
Trigger: CCCTCGATGGCTGCATGGTCAGGCCTCAGGGCTCTC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGGTCCTGCGCTCGAATaGCAGATGGGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVGPALE*QMGWEA
Trigger: GGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR GCA 90 bp GGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATCCCCTGGTGACTCGGCATaGGTGCCACCTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: GSSSMATKLFNLALRSASPGDSA*VPPCTM
Trigger: CATGGTGCAAGGTGGCACGCATGCCGAGTCACCAGG...GGATGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGAAGCATGCAAGTCAGTaGACTTCCCTGGTTAGACTT +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWKHASQ*TSLVRL
Trigger: AAGTCTAACCAGGGAAGTGCACTGACTTGCATGCTT...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCGGCGGGAGGGCAGTTaGCATCACTTGGCATTCACA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFRREGS*HHLAFT
Trigger: TGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACACGGTCCGCAGCAGTaGCATGGACCGCTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPHGPQQ*HGPLRV
Trigger: AACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAGTGGCTGCTATTGTTaGTGCTGCTTGATTTACTTC +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSGCYC*CCLIYF
Trigger: GAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCTGAAGCAGACCCCTaGCCCACTGGCGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFPEADP*PTGVGR
Trigger: CCTTCCCACGCCAGTGGGGCAGGGGTCTGCTTCAGG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTGTCTTGTGAATCTCTaGTCATTTCCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGCLVNL*SFPGQL
Trigger: AAGCTGTCCAGGAAATGAGCAGAGATTCACAAGACA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGCCTGCAACAACAGTaGGCACCCCTGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTSLQQQ*APLQWG
Trigger: TCCCCACTGCAGGGGTGCGCACTGTTGTTGCAGGCT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAGATGGGCCGGACCCTaGAGCCTTCCTTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPRWAGP*SLPCAP
Trigger: AGGGGCACAAGGAAGGCTGCAGGGTCCGGCCCATCT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAGGAGTGCTGGGCACTaGAGGCACCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFRSAGH*RHQQAW
Trigger: CCAGGCCTGCTGGTGCCTGCAGTGCCCAGCACTCCT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACAGGCACGGCAGGAGTaGTGGGCACTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVQARQE*WALQAP
Trigger: TGGTGCCTGCAGTGCCCAGCACTCCTGCCGTGCCTG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGCTCTGCCTGGAACTaGCCTGACCCTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTCSAWN*PDPSQL
Trigger: CAGCTGGGAAGGGTCAGGGCAGTTCCAGGCAGAGCA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACTTGGTGGTGTTGGTTaGTCTGGAAACCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTLGGVG*SGNPGG
Trigger: GCCCCCGGGGTTTCCAGAGCAACCAACACCACCAAG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATTGAAAAAGGGCTCCTaGCAACAGATAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLLKKGS*QQIKRG
Trigger: CCCTCTTTTTATCTGTTGGCAGGAGCCCTTTTTCAA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACTGTGGGGACTTCGTCTTCCAGCACCGATTCTGACGGCCCTAATTGCCTTGTTCGTACTGATTTTCCGTaGGAACCTCATTATTGCACT +
Preference number: 4 (lower is better)
Translates to: TVGTSSSSTDSDGPNCLVRTDFP*EPHYCT
Trigger: AGTGCAATAATGAGGTTCCCACGGAAAATCAGTACG...AACAAGGCAATTAGGGCCGTCAGAATCGGTGCTGGAAGACGAAGTCCCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCGAGTTGTTGTGGTTaGCCACCTTACGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPSCCG*PPYGCW
Trigger: CCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGGGTGGTGATTCCTTaGGCCCCCTCTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGVVIP*APSVRD
Trigger: GTCTCTTACAGAGGGGGCCCAAGGAATCACCACCCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTATGTAGGTACCACATaGCAAACACCTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGYVGTT*QTPATQ
Trigger: TTGTGTTGCAGGTGTTTGCCATGTGGTACCTACATA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGACACAGGGCTGGTGTaGGTCAGACCCACACATCTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFDTGLV*VRPTHL
Trigger: CAGATGTGTGGGTCTGACCCACACCAGCCCTGTGTC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAGACCCCTGCCCCACTaGCGTGGGAAGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRPLPH*RGKVSQ
Trigger: CTGGCTCACCTTCCCACGCCAGTGGGGCAGGGGTCT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGGTTCCTTTGAACGCTaGTTGGTTTTGTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLGSFER*LVLSLF
Trigger: AAACAAGGACAAAACCAACCAGCGTTCAAAGGAACC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGATGGACTACGAAGAGTaGGTTTCCACAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGMDYEE*VSTKAF
Trigger: AAAAGCCTTTGTGGAAACCCACTCTTCGTAGTCCAT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAACAATCCCATCACATaGACTACGAAGAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLNNPIT*TTKSGF
Trigger: AAACCCACTCTTCGTAGTCCATGTGATGGGATTGTT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCACCATGCTGCCAAATaGATGACCTGCCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFHHAAK*MTCPAH
Trigger: GTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCCCTTCGGCCACTATGTaGAGTTTCTTCTATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLISGGLLTNTDADTGLLPSATM*SFFYRK
Trigger: TTTCCTATAGAAGAAACTTCACATAGTGGCCGAAGG...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGACCAGTTCCTGAATTTTaGGAAATAAGATCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGPVPEF*EIRSFG
Trigger: GCCGAAGGATCTTATTTCTCAAAATTCAGGAACTGG...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGGGACCAGCAGGCGATaGACACGCTCACCACAATCA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTGTSRR*TRSPQS
Trigger: TGATTGTGGTGAGCGTGTTCATCGCCTGCTGGTCCC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATGGCCAGCGTGTAGATaGCCGGGTTCATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPWPACR*PGSWRS
Trigger: ACTCCGCCATGAACCCGGTCATCTACACGCTGGCCA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACTGGTCACAAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTLVTNS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTTGTGACCAG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTCATACCACAAATATTaGTACCTCCTAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSYHKY*YLLVEM
Trigger: CATTTCCACTAGGAGGTATCAATATTTGTGGTATGA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTATGCTGCCAAATGGATaGCCTGCCCGGCTCACATTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFMLPNG*PARLTL
Trigger: CAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCAT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACTGGGTTTCCACCCCTaGTCAGGGGCCTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVLGFHP*SGASQG
Trigger: TCCCTGAGAGGCCCCTGATCAGGGGTGGAAACCCAG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGAACTTTTACGATGTTTaGACCACAGCCCTAAATTTG +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWNFYDV*TTALNL
Trigger: CAAATTTAGGGCTGTGGTTCAAACATCGTAAAAGTT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACTGGGCTCGAACTCCTaGCCTCAAGTGATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTLGSNS*PQVISL
Trigger: CAGGCTGATCACTTGAGGTCAGGAGTTCGAGCCCAG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGGGAAATTCAGTGCATaGATTATTGAATCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLGKFSA*IIESCN
Trigger: GTTACAGGATTCAATAATTCATGCACTGAATTTCCC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTCCCCAAGTTAGACCCTaGCAAGGTCAGAGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLIPQVRP*QGQRCL
Trigger: TAGGCACCTCTGACCTTGGCAGGGTCTAACTTGGGG...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTAGGAGTACAGACAGCTaGAGGGTAGAGACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLIRSTDS*RVETLL
Trigger: GAGGAGCGTCTCTACCCTGCAGCTGTCTGTACTCCT...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACACGGTCCGCAGCAGTaGCATGGACCGCTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVHGPQQ*HGPLRV
Trigger: AACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAGGATGGGGCACGCCTaGACCCTGCAGGCCACATCA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFRMGHA*TLQATS
Trigger: TGATGTGGCCTGCAGGGTGCAGGCGTGCCCCATCCT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGGCTCTTCTGTAATTTaGAGAAACCTGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGGSSVI*RNLKTI
Trigger: GATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGAACATAGAATCAAAGTaGTGTCTTGTGAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWNIESK*CLVNLC
Trigger: GCAGAGATTCACAAGACAGCACTTTGATTCTATGTT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCGATCTTGGCTCACTaGAATCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPAILAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGATTGCAGTGAGCCAAGATCGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGCAGATTGATTTTGGATaGGTCTACACATTATTGCGC +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGQIDFG*VYTLLR
Trigger: GCGCAATAATGTGTAGACGCATCCAAAATCAATCTG...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATCTGAGATGGCCCCTTaGTTCTTTGCAAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLSEMAP*FFAKIF
Trigger: AAAAATCTTTGCAAAGAAGCAAGGGGCCATCTCAGA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGCTCATTATTGCACTGTaGGGACTTCGTCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYELIIAL*GLRLPA
Trigger: TGCTGGAAGACGAAGTCCCCACAGTGCAATAATGAG...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAAGAGAGACTGACTATTaGGAGACTCAAAAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGRETDY*ETQKAQ
Trigger: TTGGGCTTTTTGAGTCTCCCAATAGTCAGTCTCTCT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGATAGGCTCTGTGAGGTaGCTAAAGGCACATTCAAAT +
Preference number: 4 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWIGSVR*LKAHSN
Trigger: ATTTGAATGTGCCTTTAGCCACCTCACAGAGCCTAT...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCGCGGTGCCTCTTGTTaGCGTCGTAAGGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFRGASC*RRKASF
Trigger: AAATGAGGCCTTACGACGCCAACAAGAGGCACCGCG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACGCTCCGAGTTGTTGTaGTTGGCCACCTTACGGCTG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRSELL*LATLRL
Trigger: CAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATCCGCAGCAGTGCCATaGACCGCTCCGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTSAAVP*TAPSCC
Trigger: ACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGACACAGGGCTGGTGTaGGTCAGACCCACACATCTG +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTDTGLV*VRPTHL
Trigger: CAGATGTGTGGGTCTGACCCACACCAGCCCTGTGTC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGAGGGGCCATCACCTaGCAGACAGCCAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRGAIT*QTASYP
Trigger: TGGATAGCTGGCTGTCTGCCAGGTGATGGCCCCTCT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTCTGTGAACAGGAACTaGAGAATCACTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLSVNRN*RITISD
Trigger: ATCAGAAATAGTGATTCTCCAGTTCCTGTTCACAGA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCATGGGAAGCGATTTaGTGTCTGGAGTTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPWEAI*CLELPG
Trigger: TCCCGGCAACTCCAGACACCAAATCGCTTCCCATGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTACATACTGCCCTCCCTaGGGAACCAGACCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFTYCPP*GTRPWE
Trigger: CTCCCACGGTCTGGTTCCTCAGGGAGGGCAGTATGT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGGGACCAGCAGGCGATaGACACGCTCACCACAATCA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPGTSRR*TRSPQS
Trigger: TGATTGTGGTGAGCGTGTTCATCGCCTGCTGGTCCC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATGGCCAGCGTGTAGATaGCCGGGTTCATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVWPACR*PGSWRS
Trigger: ACTCCGCCATGAACCCGGTCATCTACACGCTGGCCA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTATGCTACTTTTCATTaGTGTCAAGAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGYATFH*CQEGNR
Trigger: TCTGTTGCCTTCTTGACATCAATGAAAAGTAGCATA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATATGCTACTTTTCATTaGTGTCAAGAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLYATFH*CQEGNR
Trigger: TCTGTTGCCTTCTTGACATCAATGAAAAGTAGCATA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACTGGTCACAAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPLVTNS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTTGTGACCAG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAACTCCTGACCTCAAGTaGTTGCCTGCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPTPDLK*LPALAS
Trigger: GGAGGCCAAGGCAGGCAATCACTTGAGGTCAGGAGT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTAAACCTTCTCCATTCTaGTGCTGCTTCATGACAGCA +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECKPSPF*CCFMTA
Trigger: TGCTGTCATGAAGCAGCAGCAGAATGGAGAAGGTTT...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCTTCGGAGAGTGGCTaGTATTGTTGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPSESG*YCCCCL
Trigger: CAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCGATCTTGGCTCACTaGAATCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFAILAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGATTGCAGTGAGCCAAGATCGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCTGACCCTTCCCAGCTaGCGCCTCCTGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFLTLPS*RLLKSQ
Trigger: CTGTGACTTCAGGAGGCGGCAGCTGGGAAGGGTCAG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTTCAAGTGCTTCTGCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFFKCFC*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGCAGAAGCACTTGAA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCGATCTCGGCTCATTaGAACCACTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPAISAH*NHCLLG
Trigger: ACCCAGGAGGCAGTGGTTGCAATGAGCCGAGATCGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CCTGACGTGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGCATTTCTTTTGTAACTaGCCGAGCACCGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PDVRFFFYGNKVIQPSIKHFFCN*PSTGLG
Trigger: GCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATG...CTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCACGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAAACAGTACAAAGTCCTaGCAGTTAAAGGGTTCTACA +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGNSTKS*QLKGST
Trigger: TGTAGAACCCTTTAACTGCCAGGACTTTGTACTGTT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGGGCTCTGGTAACACTTaGGAAACAGTACAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEGSGNT*ETVQSP
Trigger: AGGACTTTGTACTGTTTCCCAAGTGTTACCAGAGCC...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACGCGGTGCCTCTTGTTaGCGTCGTAAGGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRGASC*RRKASF
Trigger: AAATGAGGCCTTACGACGCCAACAAGAGGCACCGCG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCACCTTACGGCTGCTaGACTTCACCAGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPPYGC*TSPGSR
Trigger: TCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGATGAGGGGGCTGTGTaGGGCAGGTCTTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVDEGAV*GRSSLT
Trigger: GGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATCAGACCCACACATCTaGGGCCAGCCTTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPSDPHI*GQPWTS
Trigger: GCTTGTCCAAGGCTGGCCCCAGATGTGTGGGTCTGA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGACAGGACACAGGGCTaGTGTGGGTCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFDRTQG*CGSDPH
Trigger: GTGTGGGTCTGACCCACACCAGCCCTGTGTCCTGTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATGGGTCGAGGTCAGCTaGAATGCCAAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPWVEVS*NAKCWQ
Trigger: CTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGTCCAGATTTTAGAATaGTGCCTAATTCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RLTASRWLFPKSFSITNKVQILE*CLILEV
Trigger: GACCTCCAGAATTAGGCATCATTCTAAAATCTGGAC...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAACATCTGAACTTACCTaGGTTCTACTCAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGTSELT*VLLNKD
Trigger: GTCTTTATTGAGTAGAACTCAGGTAAGTTCAGATGT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGAAGAGACTTAAGTATTTaGTTGTCTGCATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGRDLSI*LSASSV
Trigger: GACTGAAGATGCAGACAATCAAATACTTAAGTCTCT...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCGGCTTAAATTCCACCTaGACACTTAGAAATAAAGCC +
Preference number: 4 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLGLNST*TLRNKA
Trigger: GGCTTTATTTCTAAGTGTTCAGGTGGAATTTAAGCC...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAAAGGGAAGCGGGGCTaGGGTTCCGGCTTCATTCAG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFKGKRG*GSGFIQ
Trigger: CTGAATGAAGCCGGAACCTCAGCCCCGCTTCCCTTT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGCAGAAGGCAGTGGATaGTGTCAGCAGCTTAGTACA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFAEGSG*CQQLST
Trigger: TGTACTAAGCTGCTGACATCATCCACTGCCTTCTGC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGGGGAAGGAGACTTTATaGCCAGTAGCTATAACAGTA +
Preference number: 4 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEGKETL*PVAITV
Trigger: TACTGTTATAGCTACTGGGCATAAAGTCTCCTTCCC...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACCAGCCGTCTGCTTCTaGTTCTCCTTCATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTPAVCF*FSFIGS
Trigger: AGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGTGAACAGTGCCCTGTaGCAGCATCCTCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVVNSAL*QHPPSH
Trigger: ATGGGAGGGAGGATGCTGGCACAGGGCACTGTTCAC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAGGATGAGAGGAGGTTaGCTGCCCAGATCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPRMRGG*LPRSLP
Trigger: TGGGAGAGATCTGGGCAGGCAACCTCCTCTCATCCT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACGAGGTCAGCTGGAATaGCAAGTGCTGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPRGQLE*QVLAER
Trigger: CCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGCAGGCCCTGGCACTGTaGAAGCCTAACTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQQALAL*KPNLLI
Trigger: AATTAACAAGTTAGGCTTCCACAGTGCCAGGGCCTG...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTAAACCAACACCAGCCCTaGGCATGGCCAGCTATCCTT +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLNQHQP*AWPAIL
Trigger: AAGGATAGCTGGCCATGCCCAGGGCTGGTGTTGGTT...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACACACCCAGCTGCACAGGCTTGGCCCATTAATGCAGCTCCCCTGAGAAATAACGATTTTTCAAGATTGTaGCATGCTCAAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: THPAAQAWPINAAPLRNNDFSRL*HAQILL
Trigger: AAGGAGAATTTGAGCATGCCACAATCTTGAAAAATC...GTTATTTCTCAGGGGAGCTGCATTAATGGGCCAAGCCTGTGCAGCTGGGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGGGCACCAATCTGCACTaGACAATCTCGTCACTGATT +
Preference number: 4 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQGTNLH*TISSLI
Trigger: AATCAGTGACGAGATTGTCCAGTGCAGATTGGTGCC...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATCCGCAGCAGTGCCATaGACCGCTCCGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVSAAVP*TAPSCC
Trigger: ACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAAGAGACATCCACACTaGGCAGGCTGTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFKRHPH*AGCWSK
Trigger: CTTTGACCAACAGCCTGCCCAGTGTGGATGTCTCTT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATCACACAGCATTGTGTaGCCCACGACCTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPSHSIV*PTTFPL
Trigger: GAGAGGGAAGGTCGTGGGCCACACAATGCTGTGTGA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGTGGAAGTACTGGGATaGCTAGCCACGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVVEVLG*LATSGC
Trigger: GCAGCCTGACGTGGCTAGCCATCCCAGTACTTCCAC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGGAAACCAGTTCCTaGATTTTGAGAAATAAGATC +
Preference number: 4 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYEETSS*ILRNKI
Trigger: GATCTTATTTCTCAAAATTCAGGAACTGGTTTCCTC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CCTGACGTGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGTCTAGATTTCTTGGGTaGCCTCGCTCTGCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PDVRFFFYGNKVIQPSIKSRFLG*PRSAFG
Trigger: TCCAAAAGCAGAGCGAGGTCACCCAAGAAATCTAGA...CTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCACGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTGTCCAGAGCTGGCAGTaGCATTGTAAATTTGATCGC +
Preference number: 4 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLIVQSWQ*HCKFDR
Trigger: GCGATCAAATTTACAATGTCACTGCCAGCTCTGGAC...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCGTAAGGCCTCATTTTaGTCATTGTCAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFRKASF*SLSSAA
Trigger: AGCGGCACTTGACAATGATCAAAATGAGGCCTTACG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAACACGATGAACCACTaGGCCTTGAAGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPNTMNH*ALKRMG
Trigger: CCCCATCCTCTTCAAGGCTCAGTGGTTCATCGTGTT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCAGGGACAAATGACTaGAAGGACAGGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFAGTND*KDRTQG
Trigger: GCCCTGTGTCCTGTCCTTTCAGTCATTTGTCCCTGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACCTCAGTTTCCCCCATaGCAACCTGACCCTACCATT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPPQFPP*QPDPTI
Trigger: AATGGTAGGGTCAGGTTGTCATGGGGGAAACTGAGG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp GGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATCCCCTCATGGCAGCATCTaGCTTCTGAATGTACACAGG +
Preference number: 4 (lower is better)
Translates to: GSSSMATKLFNLALRSASPHGSI*LLNVHR
Trigger: CCTGTGTACATTCAGAAGGCAGATGCTGCCATGAGG...GGATGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTATCCAAGGAGAAACATTaGTGGGAGGAGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLSKEKH*WEEGEP
Trigger: TGGCTCACCCTCCTCCCAGCAATGTTTCTCCTTGGA...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGGAGGGTGTCTAGGATaGAGCAGAAGGCAGTGGATG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFGGCLG*SRRQWM
Trigger: CATCCACTGCCTTCTGCTGCATCCTAGACACCCTCC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGCCAGGCCAGCCGTCTaGTTCTGCTTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVARPAV*FCFSFI
Trigger: TATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACCAGAGCCCTCACCATaGTGCCAAATGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVPEPSP*CQMDDL
Trigger: CAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCTCATTGCAACCACTaGCTCCTGGGTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPAHCNH*LLGSSA
Trigger: AGCACTTGAACCCAGGAGGCAGTGGTTGCAATGAGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTTTGGTGTCTGGAGTTaGCGGGAAGGGAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFFGVWS*REGKFS
Trigger: ACTGAATTTCCCTTCCCGGCAACTCCAGACACCAAA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTCTGGCATGTTTTAGAGACAAACTGCCTCATGCTCCCATGCCAGCAGAATGTGCGGTTCTTCTTCTATaGCAACAAAGTTATTCAACC +
Preference number: 4 (lower is better)
Translates to: SLACFRDKLPHAPMPAECAVLLL*QQSYST
Trigger: GGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGC...ACATTCTGCTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAACATGCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp GGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATCCTCATCCTCACTAAGCTaGGTTCATCCAGCCTACCTC +
Preference number: 4 (lower is better)
Translates to: GSSSMATKLFNLALRSASSSSLS*VHPAYL
Trigger: GAGGTAGGCTGGATGAACCCAGCTTAGTGAGGATGA...GGATGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGCAGTTGCCATCACTTaGCATTCACAGACGATTAGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFAVAIT*HSQTIS
Trigger: GCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTTCCAACAGCCAGATGTaGACTTGCTCCCGGGAATGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFSNSQM*TCSREW
Trigger: CCATTCCCGGGAGCAAGTCCACATCTGGCTGTTGGA...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCCTGTAGGTTCTCCTaGAGGCAAACAGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFACRFS*RQTGQS
Trigger: GGACTGTCCTGTTTGCCTCCAGGAGAACCTACAGGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAAGTCACAGAGGCCTTaGGTCGAGGTCAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPKSQRP*VEVSWN
Trigger: ATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAACAGTGCATGTCTaGGCAGTGCCCATGCAGACA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFPTVHV*AVPMQT
Trigger: TGTCTGCATGGGCACTGCCCAGACATGCACTGTTGG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
3UTR CAA 72 bp GTTATTTCAAGGGAGCCTTATGTCATACCACAAATATaGATACCTCCTAGTGGAAATGGTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VISREPYVIPQI*IPPSGNGGCGL
Trigger: GAGCCCACAGCCACCATTTCCACTAGGAGGTATCAATATTTGTGGTATGACATAAGGCTCCCTTGAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGTCTTTTCATGTTTACTaGGAGACACTGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYESFHVY*ETLLTS
Trigger: AGATGTAAGCAGTGTCTCTCAGTAAACATGAAAAGA...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGAGCCAGGTTGCCAATaGAAAAGTACATGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTEPGCQ*KSTCGC
Trigger: ACAACCGCATGTACTTTTTCATTGGCAACCTGGCTC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAACACGATGAACCACTaGGCCTTGAAGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVNTMNH*ALKRMG
Trigger: CCCCATCCTCTTCAAGGCTCAGTGGTTCATCGTGTT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCACGTTGTTTACACTaGAGCGGGGTGGTGATTCCT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFARCLH*SGVVIP
Trigger: AGGAATCACCACCCCGCTTCAGTGTAAACAACGTGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATTACGCAGGGACAAATaGCTGAAAGGACAGGACACA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTLRRDK*LKGQDT
Trigger: TGTGTCCTGTCCTTTCAGTCATTTGTCCCTGCGTAA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCTGGTGACTTTTCTCTaGGGCTGCATGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFLVTFL*GCMPLL
Trigger: CAGAAGTGGCATGCAGCCTCAGAGAAAAGTCACCAG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATGGGAACCTCATTATTaGACTGTGGGGACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: CGSSSMATKLFNLALRSAWEPHY*TVGTSS
Trigger: AGACGAAGTCCCCACAGTGCAATAATGAGGTTCCCA...TGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAATGGGTGACCTCGCTCTaGTTTTGGAGACAGTCCATT +
Preference number: 4 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQWVTSL*FWRQSI
Trigger: AATGGACTGTCTCCAAAAGCAGAGCGAGGTCACCCA...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGTTTACTGAGAGACACTaGTTACATCTGAACTTACCT +
Preference number: 4 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEFTERH*LHLNLP
Trigger: AGGTAAGTTCAGATGTAAGCAGTGTCTCTCAGTAAA...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp GGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATCCCCACTCTCTTCCAAGTaGTACACTAACACATCTCCC +
Preference number: 4 (lower is better)
Translates to: GSSSMATKLFNLALRSASPLSSK*YTNTSP
Trigger: GGGAGATGTGTTAGTGTAGCACTTGGAAGAGAGTGG...GGATGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACAGGAAGTAGATGCGTaGGTAGAGGATCACGATGGT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPQEVDA*VEDHDG
Trigger: ACCATCGTGATCCTCTACGCACGCATCTACTTCCTG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATCACCAGGAAGTAGATaGGTGCGTAGAGGATCACGA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPSPGSR*VRRGSR
Trigger: TCGTGATCCTCTACGCACGCATCTACTTCCTGGTGA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGCTGCTATTGTTGCTaGTGCTTGATTTACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGCYCC*CLIYFC
Trigger: GCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCCGTCTGCTTCTaGTTCTCCTTCATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFPAVCF*FSFIGS
Trigger: AGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACCACACCTTTGCTTTTaGCATGCATCCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPPHLCF*HASNSQ
Trigger: CTGGCTGTTGGATGCATGGCAAAAGCAAAGGTGTGG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACCTTCTCCACACCTTTaGTTTTGCCATGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTPSPHL*FCHASN
Trigger: GTTGGATGCATGGCAAAAGCAAAGGTGTGGAGAAGG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAGCAGTTGCCATCACTTaGCATTCACAGACGATTAGC +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTAVAIT*HSQTIS
Trigger: GCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGC...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATTGACCTTCGGAGAGTaGCTGCTATTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPLTFGE*LLLLLL
Trigger: CAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTACAATGTCCTTGTACTaGGGGTTCAGTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFTMSLY*GFSLNP
Trigger: TGGATTCAGACTGAACCCCCAGTACAAGGACATTGT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACCCACTCCAGTATGTTaGGTTTCTGTCCCAGAAACC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPPTPVC*VSVPET
Trigger: GGTTTCTGGGACAGAAACCCAACATACTGGAGTGGG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGACACCACAGTGTCCTaGTTTATCCTACAGATTGCT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFDTTVS*FILQIA
Trigger: AGCAATCTGTAGGATAAACCAGGACACTGTGGTGTC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCATGCCAGCCCTACTTaGCTTCCCATTCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFHASPT*LPIHLR
Trigger: TCTCAGGTGAATGGGAAGCCAAGTAGGGCTGGCATG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATGTCCTGGAGCTTGGTaGTGTTGGTTGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPCPGAW*CWLLWK
Trigger: TTTCCAGAGCAACCAACACCACCAAGCTCCAGGACA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAATCCTCGTGACCCTCTaGAGTGCTGAATGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPILVTL*SAECCQ
Trigger: TTGACAGCATTCAGCACTCCAGAGGGTCACGAGGAT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGAGGTGGCTCCAAATaGTTTCTGTATCCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTRGGSK*FLYPRD
Trigger: GTCACGAGGATACAGAAACCATTTGGAGCCACCTCT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATTTACAGTGACATCGTaGGAAGATCCCGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPFTVTS*EDPALP
Trigger: GGGAAGTGCGGGATCTTCCCACGATGTCACTGTAAA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATCCTCATCTAGGGCATaGGAGCTGGTGACCCATTAT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPSSSRA*ELVTHY
Trigger: ATAATGGGTCACCAGCTCCCATGCCCTAGATGAGGA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATACTTTAGGGGACTCTaGTGGGAGGTTCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPYFRGL*WEVPLN
Trigger: GTTCAAAGGAACCTCCCATCAGAGTCCCCTAAAGTA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGAGGTGAGTTACTCTaGACCTATGAAAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGGELL*TYENVS
Trigger: AGAGACATTTTCATAGGTTCAGAGTAACTCACCTCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGGCCTCAATGGATTCTaGATTCCAAACTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVGLNGF*IPNSSP
Trigger: GGGGGAAGAGTTTGGAATTCAGAATCCATTGAGGCC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAGAGAGGGAAAGTGGTaGGTGAAGGCCTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFREGKW*VKASMD
Trigger: ATCCATTGAGGCCTTCACTCACCACTTTCCCTCTCT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTAGTTTTAGAGACAAACTaGCTCATGCTCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLVLETN*LMLPCQ
Trigger: CTGGCATGGGAGCATGAGGCAGTTTGTCTCTAAAAC...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CCTGACGTGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGTTGGAGACAGTCCATTaGAAAATGCATGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PDVRFFFYGNKVIQPSIKLETVH*KMHASH
Trigger: GTGTGAAGCATGCATTTTGCAATGGACTGTCTCCAA...CTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCACGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAGAAGGCAACAGAAATaGTCCTGGGGAAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPRRQQK*SWGRSP
Trigger: AGGAGATCTTCCCCAGGAGCATTTCTGTTGCCTTCT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGCGTCTACACATTATTaGGCACGGTTAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFASTHY*ARLKAS
Trigger: AGATGCTTTTAACCGTGCGCAATAATGTGTAGACGC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAATCCCAAGAGTTAAGTaGTGGGCTAAAGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTIPRVK*WAKGQI
Trigger: AATCTGGCCTTTAGCCCAGCACTTAACTCTTGGGAT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACATTTTCTGGAATCATaGCAGCCCCTGGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTHFLES*QPLVTF
Trigger: AAAAGTCACCAGGGGCTGGCATGATTCCAGAAAATG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAGGCAATGTACTTCTTaGAGTAGAGGGGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRQCTS*SRGAGW
Trigger: CCATCCTGCCCCTCTACTCCAAGAAGTACATTGCCT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAAGAGACATCCACACTaGGCAGGCTGTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVKRHPH*AGCWSK
Trigger: CTTTGACCAACAGCCTGCCCAGTGTGGATGTCTCTT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACTCTGGAGCCCAAAGTaGACAAGGCACGTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVLWSPK*TRHVVY
Trigger: GTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAACAATGTCCTTGTACTaGGGGTTCAGTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTTMSLY*GFSLNP
Trigger: TGGATTCAGACTGAACCCCCAGTACAAGGACATTGT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACTGGATTTTCTGAGATaGCCCCTTGCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTLDFLR*PLASLQ
Trigger: TTGCAAAGAAGCAAGGGGCCATCTCAGAAAATCCAG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAACTCACCAATACTATaGGCTCTGCATTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFNSPIL*ALHFRV
Trigger: CACCCTAAAATGCAGAGCCCATAGTATTGGTGAGTT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGAAAAGTGGCACATTTaGGAACACAGCGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFEKWHI*EHSERG
Trigger: CCCTCTCTCGCTGTGTTCCCAAATGTGCCACTTTTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGTACAGCTTCCATCTaGAAATCTCCAGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTSTASI*KSPGTR
Trigger: TCTAGTGCCTGGAGATTTCCAGATGGAAGCTGTACT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAAAATTCCTAAGTGATTaGGGGACACCATGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPKFLSD*GTPWEA
Trigger: CGCTTCCCATGGTGTCCCCCAATCACTTAGGAATTT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTAATAAAGCCAGATGCTaGGACATATGGCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLINKARC*DIWLFA
Trigger: TGCAAAAAGCCATATGTCTCAGCATCTGGCTTTATT...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATTACGCAGGGACAAATaGCTGAAAGGACAGGACACA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVLRRDK*LKGQDT
Trigger: TGTGTCCTGTCCTTTCAGTCATTTGTCCCTGCGTAA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCCACGGGGGATTACTaGCTTGCTGCTTTTCTAATA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFATGDY*LAAFLI
Trigger: TATTAGAAAAGCAGCAAGTCAGTAATCCCCCGTGGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATGGAGCAAAGTGTTATaGACAATAGCTACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTWSKVL*TIATES
Trigger: GCTCTCTGTAGCTATTGTTCATAACACTTTGCTCCA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACTTCTGACCTTCACGTaGATGAAACCCTACAGGATA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPLLTFT*MKPYRI
Trigger: TATCCTGTAGGGTTTCATTCACGTGAAGGTCAGAAG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCTGCATGCCACTTCTaGAAACGTACTGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFAACHF*KRTANC
Trigger: ACAGTTTGCAGTACGTTTTCAGAAGTGGCATGCAGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAACTCTTCTTCAAAGCATaGAAGTCAGTGCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQLFFKA*KSVHFP
Trigger: AGGGAAGTGCACTGACTTGCATGCTTTGAAGAAGAG...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACCCATTCTGAAGTGCTaGGTTCTTGTCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVPILKC*VLVHDA
Trigger: TGCATCATGGACAAGAACGCAGCACTTCAGAATGGG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGATAGTCACGATCAGTaGCAGCTTTCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVDSHDQ*QLSGCC
Trigger: ACAGCATCCTGAAAGCTGGCACTGATCGTGACTATC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACCTTTGCTTTTGCCATaGATCCAACAGCCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVPLLLP*IQQPDV
Trigger: CACATCTGGCTGTTGGATGCATGGCAAAAGCAAAGG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCAGAAACCGACAAGCTaGAGACAAACCTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFQKPTS*RQTLVP
Trigger: TGGAACCAAGGTTTGTCTGCAGCTTGTCGGTTTCTG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAACATCTGAAAGACTCTaGAGCCCAAAGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVTSERL*SPKWTR
Trigger: CCTTGTCCACTTTGGGCTCCAGAGTCTTTCAGATGT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCTCTGTAACATTTTCTaGAATCATGCCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFLCNIF*NHASPW
Trigger: CCAGGGGCTGGCATGATTCCAGAAAATGTTACAGAG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAAGACACTGCTTACATCTaGACTTACCTGAGTTCTACT +
Preference number: 4 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQDTAYI*TYLSST
Trigger: AGTAGAACTCAGGTAAGTTCAGATGTAAGCAGTGTC...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTTCCCCCATGACAACCTaGCCCTACCATTTTATACAT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFSPMTT*PYHFIH
Trigger: ATGTATAAAATGGTAGGGTCAGGTTGTCATGGGGGA...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAATCTCATCCATGCATaGGTTTATTCCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTNLIHA*VYSQVQ
Trigger: TTGTACCTGGGAATAAACTCATGCATGGATGAGATT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGATCCCATTCTGAAGTaGTGCGTTCTTGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFDPILK*CVLVHD
Trigger: ATCATGGACAAGAACGCAGCACTTCAGAATGGGATC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCACAACAGAAATGCTCCTaGGGAAGATCTCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPQQKCS*GRSPYK
Trigger: TTTGTAAGGAGATCTTCCCCAGGAGCATTTCTGTTG...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTGCATTTTGCATAAGTaGAAGATATCTGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFCILHK*KISGCL
Trigger: AAGACAGCCAGATATCTTCCACTTATGCAAAATGCA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATATCCTACAGATTGCTaGGATACCCACTCCAGTATG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVYPTDC*DTHSSM
Trigger: CATACTGGAGTGGGTATCCCAGCAATCTGTAGGATA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTACTGGCATGTCGTTATaGTTCAGACTGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFTGMSL*FRLFLY
Trigger: GTACAAGAACAGTCTGAATCATAACGACATGCCAGT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCTGCATTTTAGGGTGTaGTTGACTCTGAATCTCATC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFLHFRV*LTLNLI
Trigger: GATGAGATTCAGAGTCAATCACACCCTAAAATGCAG...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATGCTTCAGAGACACATaGACAACTCACCAATACTAT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPCFRDT*TTHQYY
Trigger: ATAGTATTGGTGAGTTGTTCATGTGTCTCTGAAGCA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATGCTATTGTTGCTGCTaGTTGATTTACTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPCYCCC*LIYFCL
Trigger: CAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTTGTCTTGTGAATCTCTaGTCATTTCCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFCLVNL*SFPGQL
Trigger: AAGCTGTCCAGGAAATGAGCAGAGATTCACAAGACA...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGAGATACTTAGATACTaGGGACATCAGGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVEILRY*GHQGYG
Trigger: TCCATAACCCTGATGTCCGCAGTATCTAAGTATCTC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAAGTCAAATTCCACTTaGTCTGTAACATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFKSNST*SVTFSG
Trigger: TCCAGAAAATGTTACAGAGCAAGTGGAATTTGACTT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTATATCAAATAGAGCATaGGTGCATGTGAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFISNRA*VHVSQQ
Trigger: CTGTTGGCTCACATGCACCCATGCTCTATTTGATAT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
3UTR CAA 72 bp CTCATGCTATTTCATAAGAGAATATGCTACTTTTCATaGATGTCAAGAAGGCAACAGAAATGCTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LMLFHKRICYFS*MSRRQQKCSWG
Trigger: TCCCCAGGAGCATTTCTGTTGCCTTCTTGACATCAATGAAAAGTAGCATATTCTCTTATGAAATAGCATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATTCTTTCTTTATCTGTaGACAGGAACTGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPFFLYL*TGTGES
Trigger: TGATTCTCCAGTTCCTGTTCACAGATAAAGAAAGAA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGGCTCTTCTGTAATTTaGAGAAACCTGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVGSSVI*RNLKTI
Trigger: GATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATCTGAATCTCATCCATaGATGAGTTTATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVSESHP*MSLFPG
Trigger: ACCTGGGAATAAACTCATGCATGGATGAGATTCAGA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CCA 90 bp AATAGGCATGTACTCCCAGGGAAATTAACTAGTTCATCCTCCAAACTGAATCAAAAAGAAATATACCATTaGGAGTGTCCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NRHVLPGKLTSSSSKLNQKEIYH*ECPKPE
Trigger: TTCTGGCTTTGGACACTCCCAATGGTATATTTCTTT...TTGATTCAGTTTGGAGGATGAACTAGTTAATTTCCCTGGGAGTACATGCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CCA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATATTGTTTTTCCAGATaGCAATCAAAACCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TIATESSKSPKATHNYNTYCFSR*QSKPSG
Trigger: ACCTGATGGTTTTGATTGCCATCTGGAAAAACAATA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTTACCTGTGTGTTGTATaGAGATTCTATGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFYLCVV*RFYVGT
Trigger: GGTACCTACATAGAATCTCCATACAACACACAGGTA...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTATCATACCACAAATATTaGTACCTCCTAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVSYHKY*YLLVEM
Trigger: CATTTCCACTAGGAGGTATCAATATTTGTGGTATGA...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTATGTGGTTTAATTCCTaGAATGCTAAGAAACACAGG +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFMWFNS*NAKKHR
Trigger: CCTGTGTTTCTTAGCATTTCAGGAATTAAACCACAT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR TCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGAGAATCACTATTTCTaGTTTTCACTTTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFENHYF*FSLCWV
Trigger: AACCCAGCAAAGTGAAAATCAGAAATAGTGATTCTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR GCA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTACCTAGCATTAAGGTCTaGATCCATGAAATAATACTT +
Preference number: 4 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLPSIKV*IHEIIL
Trigger: AAGTATTATTTCATGGATGCAGACCTTAATGCTAGG...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR GCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAACATAGAATCAAAGTaGTGTCTTGTGAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVNIESK*CLVNLC
Trigger: GCAGAGATTCACAAGACAGCACTTTGATTCTATGTT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATATTGTTTTTCCAGATaGCAATCAAAACCATCAGGT +
Preference number: 4 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPYCFSR*QSKPSG
Trigger: ACCTGATGGTTTTGATTGCCATCTGGAAAAACAATA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAATACGTACAATCCTTaGGGAAGAGCATGTACAAAA +
Preference number: 4 (lower is better)
Translates to: SESTCITCYLCVVWRFYVNTYNP*GRACTK
Trigger: TTTTGTACATGCTCTTCCCCAAGGATTGTACGTATT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CCA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTAATACGTACAATCCTTaGGGAAGAGCATGTACAAAA +
Preference number: 4 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFNTYNP*GRACTK
Trigger: TTTTGTACATGCTCTTCCCCAAGGATTGTACGTATT...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CAA 72 bp AGTTCTACAAACGTGTTCACTTTTCTTTCCATCTATTaGTATAATACGTACAATCCTTGGGGAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: SSTNVFTFLSIY*YNTYNPWGRAC
Trigger: ACATGCTCTTCCCCAAGGATTGTACGTATTATACAAATAGATGGAAAGAAAAGTGAACACGTTTGTAGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
3UTR CAA 72 bp GAAGTTTCTTCTATAGGAAACTGTAGTCTCTACCCTTaGTATATGGTAGAAAATCAGAGACTCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: EVSSIGNCSLYP*YMVENQRLMHL
Trigger: CAAATGCATGAGTCTCTGATTTTCTACCATATACAAAGGGTAGAGACTACAGTTTCCTATAGAAGAAACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS GCA 90 bp CGGGTGGCGCGCGGCGGTGCCGGGGCGCCCGGTCCTGCGCTCGAATaGCAGATGGGCTGGGAGGCCCGGCAGTCTCAGCGCTCGCGACGT +
Preference number: 5 (lower is better)
Translates to: RVARGGAGAPGPALE*QMGWEARQSQRSRR
Trigger: ACGTCGCGAGCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCCGCGCGCCACCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp GAGGGCGCTGGGGCCACCGGCATCCTAGCGGGTGGCGCGCGGCGGTaGCGGGGCGCCCGGTCCTGCGCTCGAATGCCAGATGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: EGAGATGILAGGARR*RGARSCARMPDGLG
Trigger: TCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCCGCGCGCCACCCGCTAGGATGCCGGTGGCCCCAGCGCCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp GGCATCCTAGCGGGTGGCGCGCGGCGGTGCCGGGGCGCCCGGTCCTaGGCTCGAATGCCAGATGGGCTGGGAGGCCCGGCAGTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: GILAGGARRCRGARS*ARMPDGLGGPAVSA
Trigger: CGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCCGCGCGCCACCCGCTAGGATGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp GGCGGTGCCGGGGCGCCCGGTCCTGCGCTCGAATGCCAGATGGGCTaGGAGGCCCGGCAGTCTCAGCGCTCGCGACGTCGTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GGAGAPGPALECQMG*EARQSQRSRRRSRA
Trigger: GGCCCGGGAACGACGTCGCGAGCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp CGCGCGGCGGTGCCGGGGCGCCCGGTCCTGCGCTCGAATGCCAGATaGGCTGGGAGGCCCGGCAGTCTCAGCGCTCGCGACGTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: RAAVPGRPVLRSNAR*AGRPGSLSARDVVP
Trigger: GGGAACGACGTCGCGAGCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCCGCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp TGGGAGGCCCGGCAGTCTCAGCGCTCGCGACGTCGTTCCCGGGCCTaGGGTCCTGCTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WEARQSQRSRRRSRA*GPARSRPAAAFWSL
Trigger: CAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACGTCGCGAGCGCTGAGACTGCCGGGCCTCCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp CTCGCGACGTCGTTCCCGGGCCTGGGGTCCTGCTCGGTCGCGTCCTaGAGCCGCCTTCTGGTCCCTGAGTCCCTGTTGCCCGTCCCCGGA +
Preference number: 5 (lower is better)
Translates to: LATSFPGLGSCSVAS*SRLLVPESLLPVPG
Trigger: TCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACGTCGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp CCGGCAGTCTCAGCGCTCGCGACGTCGTTCCCGGGCCTGGGGTCCTaGTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PAVSALATSFPGLGS*SVASCSRLLVPESL
Trigger: CAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACGTCGCGAGCGCTGAGACTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp CCAGGTGCAGAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTTaGAACCAGGTCCGAGGTCTGGGCTTGGGCGGGCGCCTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: PGAETGRPETQREQA*NQVRGLGLGGRLSP
Trigger: GGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTCTGCACCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS TCA 90 bp CCTGGGGTCCTGCTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTaGGTCCCTGTTGCCCGTCCCCGGAACCGGCTTCCTCGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: PGVLLGRVLQPPSGP*VPVARPRNRLPRPQ
Trigger: TTGAGGCCGAGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334490.5
ENST00000375851.7
CDS TCA 90 bp CCTGGGGTCCTGCTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTaGGTCCCTGTTGCCCGTCCCCGGAACCGGCTTCCTCGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PGVLLGRVLQPPSGP*VPVARPRNRLPRPL
Trigger: AAGAGGCCGAGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375850.3
ENST00000648341.1
CDS GCA 90 bp GCTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTGAGTCCCTGTTaGCCGTCCCCGGAACCGGCTTCCTCGGCCTCTTGTCCTCATCGG +
Preference number: 5 (lower is better)
Translates to: ARSRPAAAFWSLSPC*PSPEPASSASCPHR
Trigger: CCGATGAGGACAAGAGGCCGAGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375850.3
ENST00000648341.1
CDS GCA 90 bp CCCAGGCCGGCCTCCAGACCTTGTCCTCATCGGGCGAGCTCCAGGTaGAGAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PRPASRPCPHRASSR*RNRAPRDPAGTGLE
Trigger: TTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTCTGCACCTGGAGCTCGCCCGATGAGGACAAGGTCTGGAGGCCGGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334490.5
ENST00000375851.7
CDS CCA 90 bp AGACCCAGCGGGAACAGGCTTGGAACCAGGTCCGAGGTCTGGGCTTaGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTTGTTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: RPSGNRLGTRSEVWA*AGACRPDSEGLFGP
Trigger: CGGCCCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp GCCCAGAGACCCAGCGGGAACAGGCTTGGAACCAGGTCCGAGGTCTaGGCTTGGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: AQRPSGNRLGTRSEV*AWAGACRPDSEGLF
Trigger: AAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCTCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp GAACCGGCTTCCTCGGCCTCTTGTCCTCATCGGGCGAGCTCCAGGTaGAGAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: EPASSASCPHRASSR*RNRAPRDPAGTGLE
Trigger: TTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTCTGCACCTGGAGCTCGCCCGATGAGGACAAGAGGCCGAGGAAGCCGGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375850.3
ENST00000648341.1
CDS GCA 90 bp GACAACCTGGGCCATCAGGCTGTCTCCTGCCACCTCCGGTACCACTaGACAGTGCTGATGGGGACCGCGAGGGCTCTGCCGTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: DNLGHQAVSCHLRYH*TVLMGTARALPFPT
Trigger: TGTGGGAAACGGCAGAGCCCTCGCGGTCCCCATCAGCACTGTGCAGTGGTACCGGAGGTGGCAGGAGACAGCCTGATGGCCCAGGTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp CCCCGCACCGGCTGGAGACGCGGCGGGAGGGCAGTTGCCATCACTTaGCATTCACAGACGATTAGCTCCAAAATCCACGAGAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: PRTGWRRGGRAVAIT*HSQTISSKIHERAP
Trigger: GGGCGCCCTCTCGTGGATTTTGGAGCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCGCGTCTCCAGCCGGTGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCATGGCCGAGCACCGGCTaGGGCTTGCAGGTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSWPSTG*GLQVGA
Trigger: GGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCA...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCCTGCCCGGCTCACATaGCAACCAGAGGGGCCATCA +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASPARLT*QPEGPS
Trigger: TGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCCGGGGTTTCACCATGTaGGCCAGGCTGGGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASRGFTM*ARLGSN
Trigger: GTTCGAGCCCAGCCTGGCCAACATGGTGAAACCCCG...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CCCATAGCAACTGGGGCCAGAGCCCTCACCATGCTGCCAAATGGATaGCCTGCCCGGCTCACATTGCAACCAGAGGGGCCATCACCTGGC +
Preference number: 5 (lower is better)
Translates to: PIATGARALTMLPNG*PARLTLQPEGPSPG
Trigger: GCCAGGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGTTGCTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp CATGAAGCCGGGTATGAAGACAACCTGGGCCATCAGGCTGTCTCCTaGCACCTCCGGTACCACTGCACAGTGCTGATGGGGACCGCGAGG +
Preference number: 5 (lower is better)
Translates to: HEAGYEDNLGHQAVS*HLRYHCTVLMGTAR
Trigger: CCTCGCGGTCCCCATCAGCACTGTGCAGTGGTACCGGAGGTGGCAGGAGACAGCCTGATGGCCCAGGTTGTCTTCATACCCGGCTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp CCCTCCCATAGCAACTGGGGCCAGAGCCCTCACCATGCTGCCAAATaGATGACCTGCCCGGCTCACATTGCAACCAGAGGGGCCATCACC +
Preference number: 5 (lower is better)
Translates to: PSHSNWGQSPHHAAK*MTCPAHIATRGAIT
Trigger: GGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGTTGCTATGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGGTCCGAGGTCTGGGCTaGGGCGGGCGCCTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TLLLISGGLLTNTDADTGVRGLG*GGRLSP
Trigger: GGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGAC...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASWGRSS*TFGEWL
Trigger: CAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 90 bp GCAGGCGATGAACACGCTCACCACAATCACCACGGTCCGCAGCAGTaGCATGGACCGCTCCGAGTTGTTGTGGTTGGCCACCTTACGGCT +
Preference number: 5 (lower is better)
Translates to: AGDEHAHHNHHGPQQ*HGPLRVVVVGHLTA
Trigger: AGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGGTGATTGTGGTGAGCGTGTTCATCGCCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 90 bp CTTTCATCCAGGTATTCAGCTCCAGCCCGTTGTAAACGCTCCGGGTaGGGTGGAAAAGGCCTCCTCCCTGTTCCTGCAGCGGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSSRYSAPARCKRSG*GGKGLLPVPAAALG
Trigger: CCCCAGAGCCGCTGCAGGAACAGGGAGGAGGCCTTTTCCACCGCACCCGGAGCGTTTACAACGGGCTGGAGCTGAATACCTGGATGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375850.3
CDS GCA 90 bp AGCAACTGGGGCCAGAGCCCTCACCATGCTGCCAAATGGATGACCTaGCCGGCTCACATTGCAACCAGAGGGGCCATCACCTGGCAGACA +
Preference number: 5 (lower is better)
Translates to: SNWGQSPHHAAKWMT*PAHIATRGAITWQT
Trigger: TGTCTGCCAGGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp CCACGGTCCGCAGCAGTGCCATGGACCGCTCCGAGTTGTTGTGGTTaGCCACCTTACGGCTGCTGGACTTCACCAGGAAGTAGATGCGTG +
Preference number: 5 (lower is better)
Translates to: PRSAAVPWTAPSCCG*PPYGCWTSPGSRCV
Trigger: CACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp GGAGTCAGCAAGCCCTACTCAGGGCAAGAGGGGAGTCAGTCACTCTaGCGGATTGGTACTAACACTGCCAGGCACGGCAGGAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GVSKPYSGQEGSQSL*RIGTNTARHGRSAG
Trigger: CCCAGCACTCCTGCCGTGCCTGGCAGTGTTAGTACCAATCCGCCAGAGTGACTGACTCCCCTCTTGCCCTGAGTAGGGCTTGCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp TCTGTGAACAGTGCCCTGTGCCAGCATCCTCCCTCCCATAGCAACTaGGGCCAGAGCCCTCACCATGCTGCCAAATGGATGACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SVNSALCQHPPSHSN*GQSPHHAAKWMTCP
Trigger: CGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGTTGCTATGGGAGGGAGGATGCTGGCACAGGGCACTGTTCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp TCAGGGGCCTCTCAGGGACACATGTGCTATGCCCGGCATGCACCCTaGCATGAAGCCGGGTATGAAGACAACCTGGGCCATCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SGASQGHMCYARHAP*HEAGYEDNLGHQAV
Trigger: GACAGCCTGATGGCCCAGGTTGTCTTCATACCCGGCTTCATGCCAGGGTGCATGCCGGGCATAGCACATGTGTCCCTGAGAGGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GCCCTGACCCTTCCCAGCTGCCGCCTCCTGAAGTCACAGAGGCCTTaGGTCGAGGTCAGCTGGAATGCCAAGTGCTGGCAGAAAGGCTTA +
Preference number: 5 (lower is better)
Translates to: ALTLPSCRLLKSQRP*VEVSWNAKCWQKGL
Trigger: TAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCTGGGAAGGGTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGTCCCTGAGTCCCTGTaGCCCGTCCCCGGAACCGGC +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGVPESL*PVPGTG
Trigger: GCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGAC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTCCGAGTTGTTGTGGTaGGCCACCTTACGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASSELLW*ATLRLL
Trigger: CAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 90 bp ACGAGAGGGCGCCCCAGGAACATTCATTTCAAAGGGAAGCGGGGCTaGGGTTCCGGCTTCATTCAGCAAGGCGTGCAGGCCAGACTCCAG +
Preference number: 5 (lower is better)
Translates to: TRGRPRNIHFKGKRG*GSGFIQQGVQARLQ
Trigger: CTGGAGTCTGGCCTGCACGCCTTGCTGAATGAAGCCGGAACCTCAGCCCCGCTTCCCTTTGAAATGAATGTTCCTGGGGCGCCCTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 90 bp CTTTCATCCAGGTATTCAGCTCCAGCCCGTTGTAAACGCTCCGGGTaGGGTGGAAAAGGCCTCCTCCCTGTTCCTGCAGCGGCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: LSSRYSAPARCKRSG*GGKGLLPVPAAALR
Trigger: ACGGAGAGCCGCTGCAGGAACAGGGAGGAGGCCTTTTCCACCGCACCCGGAGCGTTTACAACGGGCTGGAGCTGAATACCTGGATGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334490.5
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp GAGCCCTCACCATGCTGCCAAATGGATGACCTGCCCGGCTCACATTaGAACCAGAGGGGCCATCACCTGGCAGACAGCCAGCTATCCATG +
Preference number: 5 (lower is better)
Translates to: EPSPCCQMDDLPGSH*NQRGHHLADSQLSM
Trigger: CATGGATAGCTGGCTGTCTGCCAGGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GGGGCCTGCCTCCTCGAGCTGTGGCTCACCCATGCCAGCCCTACTTaGCTTCCCATTCACCTGAGAAGAGACCATGTCTTGCCTGTAGGT +
Preference number: 5 (lower is better)
Translates to: GACLLELWLTHASPT*LPIHLRRDHVLPVG
Trigger: ACCTACAGGCAAGACATGGTCTCTTCTCAGGTGAATGGGAAGCCAAGTAGGGCTGGCATGGGTGAGCCACAGCTCGAGGAGGCAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCATGGACCGCTCCGAGTaGTTGTGGTTGGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASMDRSE*LWLATL
Trigger: TAAGGTGGCCAACCACAACAACTCGGAGCGGTCCAT...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 90 bp CCAACAGTGCATGTCTGGGCAGTGCCCATGCAGACACCGCACTCGTaGGCAGTGAGTCCAGAGCCCAGCGAAGACAGAACATCAACCTGC +
Preference number: 5 (lower is better)
Translates to: PTVHVWAVPMQTPHS*AVSPEPSEDRTSTC
Trigger: GCAGGTTGATGTTCTGTCTTCGCTGGGCTCTGGACTCACTGCTCACGAGTGCGGTGTCTGCATGGGCACTGCCCAGACATGCACTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp GAAATCAGGTCTGTATGGGCTGTAGGTCGGCCTGGCAGAGAGCCCTaGGGCCTGACCATGCAGCCATCGAGGGACCAACAGTGCATGTCT +
Preference number: 5 (lower is better)
Translates to: EIRSVWAVGRPGREP*GLTMQPSRDQQCMS
Trigger: AGACATGCACTGTTGGTCCCTCGATGGCTGCATGGTCAGGCCTCAGGGCTCTCTGCCAGGCCGACCTACAGCCCATACAGACCTGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp ATCCTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTTGGGCTTaGAGGTGGGCGCCTGGCGCCGGACAGCGTTTTTGTTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ILTISFVTGRAPAWA*RWAPGAGQRFCLGF
Trigger: GAAGCCCAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375851.7
ENST00000648341.1
CDS GCA 90 bp CATGGAAAAGGCATGGAGCAAAGGCAGTCTGTGAACAGTGCCCTGTaGCAGCATCCTCCCTCCCATAGCAACTGGGGCCAGAGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: HGKGMEQRQSVNSAL*QHPPSHSNWGQSPH
Trigger: GTGAGGGCTCTGGCCCCAGTTGCTATGGGAGGGAGGATGCTGGCACAGGGCACTGTTCACAGACTGCCTTTGCTCCATGCCTTTTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp CCGCCTCCTGAAGTCACAGAGGCCTTGGGTCGAGGTCAGCTGGAATaGCAAGTGCTGGCAGAAAGGCTTATGTGTTGGCCAAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PPPEVTEALGRGQLE*QVLAERLMCWPRPS
Trigger: AGAGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GTCCAGATCCTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTTaGGCTTGCAGGTGGGCGCCTGGCGCCGGACAGCGTTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VQILTISFVTGRAPA*ACRWAPGAGQRFCL
Trigger: CAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGATCTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp AGCTGCCGCCTCCTGAAGTCACAGAGGCCTTGGGTCGAGGTCAGCTaGAATGCCAAGTGCTGGCAGAAAGGCTTATGTGTTGGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SCRLLKSQRPWVEVS*NAKCWQKGLCVGQG
Trigger: GCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGAGCACCGGCTTGGGCTaGCAGGTGGGCGCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYESTGLG*QVGAWR
Trigger: GCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCT...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS GCA 90 bp GTGCCATGGACCGCTCCGAGTTGTTGTGGTTGGCCACCTTACGGCTaGTGGACTTCACCAGGAAGTAGATGCGTGCGTAGAGGATCACGA +
Preference number: 5 (lower is better)
Translates to: VPWTAPSCCGWPPYG*WTSPGSRCVRRGSR
Trigger: TCGTGATCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp CCATGGACCGCTCCGAGTTGTTGTGGTTGGCCACCTTACGGCTGCTaGACTTCACCAGGAAGTAGATGCGTGCGTAGAGGATCACGATGG +
Preference number: 5 (lower is better)
Translates to: PWTAPSCCGWPPYGC*TSPGSRCVRRGSRW
Trigger: CCATCGTGATCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp ACCATTTCTTTTGTAACTGGCCGAGCACCGGCTTGGGCTTGCAGGTaGGCGCCTGGCGCCGGACAGCGTTTTTGTTTGGGCTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TISFVTGRAPAWACR*APGAGQRFCLGFFL
Trigger: AAGGAAGAAGCCCAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375851.7
ENST00000648341.1
CDS CCA 90 bp CGCGAGGGCTCTGCCGTTTCCCACACGAACAGCCACTCATGCTCATaGAAAAGGCATGGAGCAAAGGCAGTCTGTGAACAGTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: REGSAVSHTNSHSCS*KRHGAKAVCEQCPV
Trigger: CACAGGGCACTGTTCACAGACTGCCTTTGCTCCATGCCTTTTCCATGAGCATGAGTGGCTGTTCGTGTGGGAAACGGCAGAGCCCTCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGCCGGCCTCCAGACCTaGTCCTCATCGGGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYAGLQT*SSSGEL
Trigger: GAGCTCGCCCGATGAGGACAAGGTCTGGAGGCCGGC...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGGTCCCTGAGTCCCTGTaGCCCGTCCCCGGAACCGGC +
Preference number: 5 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYEVPESL*PVPGTG
Trigger: GCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGAC...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWWGRSS*TFGEWL
Trigger: CAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGAGGGTCACACAGCATaGTGTGGCCCACGACCTTCC +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWEGHTA*CGPRPS
Trigger: GGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 90 bp TGCATGTCTGGGCAGTGCCCATGCAGACACCGCACTCGTGAGCAGTaGGTCCAGAGCCCAGCGAAGACAGAACATCAACCTGCAAAAACG +
Preference number: 5 (lower is better)
Translates to: CMSGQCPCRHRTREQ*VQSPAKTEHQPAKT
Trigger: CGTTTTTGCAGGTTGATGTTCTGTCTTCGCTGGGCTCTGGACTCACTGCTCACGAGTGCGGTGTCTGCATGGGCACTGCCCAGACATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp GTTGGCCACCTTACGGCTGCTGGACTTCACCAGGAAGTAGATGCGTaGGTAGAGGATCACGATGGTCACCAGGATGGCCGTGAAGATGCT +
Preference number: 5 (lower is better)
Translates to: VGHLTAAGLHQEVDA*VEDHDGHQDGREDA
Trigger: AGCATCTTCACGGCCATCCTGGTGACCATCGTGATCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp TACTATCATTATCGTTGTCCAGATCCTGACCATTTCTTTTGTAACTaGCCGAGCACCGGCTTGGGCTTGCAGGTGGGCGCCTGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: YYHYRCPDPDHFFCN*PSTGLGLQVGAWRR
Trigger: CCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGATCTGGACAACGATAATGATAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS-3UTR CAA 90 bp ATGCAAGTCAGTGCACTTCCCTGGTTAGACTTACTGCTTCCCGGTGGCTTTTCCCCAGCGGGAACAGGCTaGGAACCAGGTCCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: MQVSALPWLDLLLPGGFSPAGTG*EPGPRS
Trigger: AGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGG...GGAAAAGCCACCGGGAAGCAGTAAGTCTAACCAGGGAAGTGCACTGACTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGAGCAGTCAGGGAGATaGTGCAGGCAGTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGEQSGR*CRQFQP
Trigger: GGGCTGGAACTGCCTGCACAATCTCCCTGACTGCTC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGACCGCTCCGAGTTGTaGTGGTTGGCCACCTTACGG +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLDRSEL*WLATLR
Trigger: CCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGGTTCATGGCGGAGTaGAGCACAGCCAACACGATG +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGFMAE*STANTM
Trigger: CATCGTGTTGGCTGTGCTCAACTCCGCCATGAACCC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCGGAGAGTGGCTGCTATaGTTGCTGCTGCTTGATTTA +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASGEWLL*LLLLDL
Trigger: TAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCC...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGAGGGTCACACAGCATaGTGTGGCCCACGACCTTCC +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLEGHTA*CGPRPS
Trigger: GGAAGGTCGTGGGCCACACAATGCTGTGTGACCCTC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCAGCCAGATGTGGACTaGCTCCCGGGAATGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWQPDVD*LPGMER
Trigger: TCTCTCCATTCCCGGGAGCAAGTCCACATCTGGCTG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCATGCCAGCCCTACTaGGCTTCCCATTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWPCQPY*ASHSPE
Trigger: CTCAGGTGAATGGGAAGCCAAGTAGGGCTGGCATGG...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACAGGATGAGAGGAGGTaGCCTGCCCAGATCTCTCCC +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLQDERR*PAQISP
Trigger: GGGAGAGATCTGGGCAGGCAACCTCCTCTCATCCTG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTGGAGCTTGGTGGTGTaGGTTGCTCTGGAAACCCCG +
Preference number: 5 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLWSLVV*VALETP
Trigger: CGGGGTTTCCAGAGCAACCAACACCACCAAGCTCCA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp GGGGCTGAGAAGCAGAGGTGGCTCCAAATGGTTTCTGTATCCTCGTaGCCCTCTGGAGTGCTGAATGCTGTCAAAGCCCTCCTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: GAEKQRWLQMVSVSS*PSGVLNAVKALLSL
Trigger: TAGGGAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGCCACCTCTGCTTCTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp CTGAAGTCACAGAGGCCTTGGGTCGAGGTCAGCTGGAATGCCAAGTaGTGGCAGAAAGGCTTATGTGTTGGCCAAGGCCCTCTGCTAACT +
Preference number: 5 (lower is better)
Translates to: LKSQRPWVEVSWNAK*WQKGLCVGQGPLLT
Trigger: AGTTAGCAGAGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GATGAGGGGGCTGTGTGGGGCAGGTCTTCCTTGACCTTCGGAGAGTaGCTGCTATTGTTGCTGCTGCTTGATTTACTTCTGCTTGGGTCG +
Preference number: 5 (lower is better)
Translates to: DEGAVWGRSSLTFGE*LLLLLLLDLLLLGS
Trigger: CGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp AAGTCACAGAGGCCTTGGGTCGAGGTCAGCTGGAATGCCAAGTGCTaGCAGAAAGGCTTATGTGTTGGCCAAGGCCCTCTGCTAACTGCA +
Preference number: 5 (lower is better)
Translates to: KSQRPWVEVSWNAKC*QKGLCVGQGPLLTA
Trigger: TGCAGTTAGCAGAGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGTCCGAGTTGTTGTGGTaGGCCACCTTACGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGSELLW*ATLRLL
Trigger: CAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGA...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGATGGACCGCTCCGAGTaGTTGTGGTTGGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWMDRSE*LWLATL
Trigger: TAAGGTGGCCAACCACAACAACTCGGAGCGGTCCAT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACCAGTGTCCTGGAGCTaGGTGGTGTTGGTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLPVSWS*VVLVAL
Trigger: CAGAGCAACCAACACCACCAAGCTCCAGGACACTGG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp GTACAAATCAGTCCCTTGAAGATCCAGGGCTTGCCTGGGTGGGGCTaGGAAGCAGAGGTGGCTCCAAATGGTTTCTGTATCCTCGTGACC +
Preference number: 5 (lower is better)
Translates to: VQISPLKIQGLPGWG*EAEVAPNGFCILVT
Trigger: GGTCACGAGGATACAGAAACCATTTGGAGCCACCTCTGCTTCTCAGCCCCACCCAGGCAAGCCCTGGATCTTCAAGGGACTGATTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GTGAGTTTTACAGTGACATCGTGGGAAGATCCCGCACTTCCCAGATaGCATCCCCTGGATCCAGGCCCAGAAATCAGGTCTGTATGGGCT +
Preference number: 5 (lower is better)
Translates to: VSFTVTSWEDPALPR*HPLDPGPEIRSVWA
Trigger: AGCCCATACAGACCTGATTTCTGGGCCTGGATCCAGGGGATGCCATCTGGGAAGTGCGGGATCTTCCCACGATGTCACTGTAAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATAGCACCATCCACTGCTaGAGGAGCGGACCGTCACCT +
Preference number: 5 (lower is better)
Translates to: PGGFSPSPSPSQIRLGHYSTIHC*RSGPSP
Trigger: AGGTGACGGTCCGCTCCTCAAGCAGTGGATGGTGCT...ATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGTTGATTTACTTCTGCTaGGGTCGAGCGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWLIYFC*GRAQAG
Trigger: TCCAGCCTGCGCTCGACCCAAGCAGAAGTAAATCAA...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTATTGTTGCTGCTGCTaGATTTACTTCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASYCCCC*IYFCLG
Trigger: ACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 90 bp ATTGCAACCAGAGGGGCCATCACCTGGCAGACAGCCAGCTATCCATaGCACCACAGTGTCCTGGTTTATCCTACAGATTGCTGGGATACC +
Preference number: 5 (lower is better)
Translates to: IATRGAITWQTASYP*HHSVLVYPTDCWDT
Trigger: GGTATCCCAGCAATCTGTAGGATAAACCAGGACACTGTGGTGTCATGGATAGCTGGCTGTCTGCCAGGTGATGGCCCCTCTGGTTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp GGTGGCTCCAAATGGTTTCTGTATCCTCGTGACCCTCTGGAGTGCTaGATGCTGTCAAAGCCCTCCTCTCCCTACATCAATTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GGSKWFLYPRDPLEC*MLSKPSSPYINLGD
Trigger: GTCCCCCAAATTGATGTAGGGAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp GCTCCAAATGGTTTCTGTATCCTCGTGACCCTCTGGAGTGCTGAATaGTGTCAAAGCCCTCCTCTCCCTACATCAATTTGGGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: APNGFCILVTLWSAE*CQSPPLPTSIWGTW
Trigger: CCAGGTCCCCCAAATTGATGTAGGGAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CCACAACTCCTCAAGCGCACACACACACACACACACACATGCCCCGCACCATCAGCTCCCCTTTCCTTATaGGAAGGGTCAAAACGAAGT +
Preference number: 5 (lower is better)
Translates to: PQLLKRTHTHTHTCPAPSAPLSL*EGSKRS
Trigger: ACTTCGTTTTGACCCTTCCAATAAGGAAAGGGGAGC...TGATGGTGCGGGGCATGTGTGTGTGTGTGTGTGTGTGCGCTTGAGGAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGACTTACTGCTTCCCGGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGCTCCACGGCACATCCTaGCCTGGTCGTTCCACTCTC +
Preference number: 5 (lower is better)
Translates to: RLTASRWLFPKSFSITNKLHGTS*PGRSTL
Trigger: GAGAGTGGAACGACCAGGCAAGGATGTGCCGTGGAG...CTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACCGGGAAGCAGTAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGAGTGGACAAGGCACGTaGTTTACACTGAAGCGGGGT +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGSGQGT*FTLKRG
Trigger: ACCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTGGCTCTTCTGTAATTaGCAGAAACCTGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASWLFCN*QKPENH
Trigger: ATGGTTTTCAGGTTTCTGCAAATTACAGAAGAGCCA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GCTCACTGCAATCTCCGCCTCCCGGGTTTGAGCAACTCTCCAGCCTCAGCCTCCTTCAAGGTTAGGGCTTaGAAACATTCCCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: AHCNLRLPGLSNSPASASFKVRA*KHSLVN
Trigger: ATTTACCAGGGAATGTTTCAAAGCCCTAACCTTGAA...GGAGGCTGAGGCTGGAGAGTTGCTCAAACCCGGGAGGCGGAGATTGCAGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGGGTTTATCCTACAGATaGCTGGGATACCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWGLSYR*LGYPLQ
Trigger: CTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACC...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTACAGCCTTCTGTGATGTaGATGACGCCACACACCCAA +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLQPSVM*MTPHTQ
Trigger: TTGGGTGTGTGGCGTCATCAACATCACAGAAGGCTG...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGAAGAGGGAGCGACCATaGATAAAACGATCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGKRERP*IKRSPP
Trigger: AGGCGGCGATCGTTTTATCAATGGTCGCTCCCTCTT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GCGACGCATGCAATAAATAAGAACACAGCCGCAGAGCAGGGCGCATaGAGACGATCAGTTGCAGAAGATCCCATTCTGAAGTGCTGCGTT +
Preference number: 5 (lower is better)
Translates to: ATHAINKNTAAEQGA*RRSVAEDPILKCCV
Trigger: AACGCAGCACTTCAGAATGGGATCTTCTGCAACTGATCGTCTCCATGCGCCCTGCTCTGCGGCTGTGTTCTTATTTATTGCATGCGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 90 bp CCATCACCTGGCAGACAGCCAGCTATCCATGACACCACAGTGTCCTaGTTTATCCTACAGATTGCTGGGATACCCACTCCAGTATGTTGG +
Preference number: 5 (lower is better)
Translates to: PSPGRQPAIHDTTVS*FILQIAGIPTPVCW
Trigger: CCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGACACTGTGGTGTCATGGATAGCTGGCTGTCTGCCAGGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAGAAGAGACCATGTCTaGCCTGTAGGTTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLRRDHV*PVGSPG
Trigger: TCCAGGAGAACCTACAGGCAAGACATGGTCTCTTCT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGATTTGGTGTCTGGAGTaGCCGGGAAGGGAAATTCAG +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGIWCLE*PGREIQ
Trigger: CTGAATTTCCCTTCCCGGCAACTCCAGACACCAAAT...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CACAGCGAGAGAGGGAAAGTGGTGAGTGAAGGCCTCAATGGATTCTaGATTCCAAACTCTTCCCCCACGAGACCTCAAACACTTGCACTC +
Preference number: 5 (lower is better)
Translates to: HSERGKVVSEGLNGF*IPNSSPTRPQTLAL
Trigger: GAGTGCAAGTGTTTGAGGTCTCGTGGGGGAAGAGTTTGGAATTCAGAATCCATTGAGGCCTTCACTCACCACTTTCCCTCTCTCGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp GTGCTGGCAGAAAGGCTTATGTGTTGGCCAAGGCCCTCTGCTAACTaGAGAAAGAAAAAGCAGCCAAGTTCCAAGTCCAGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: VLAERLMCWPRPSAN*RKKKQPSSKSRLMM
Trigger: CATCATCAGCCTGGACTTGGAACTTGGCTGCTTTTTCTTTCTGCAGTTAGCAGAGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp GAAGCAGAGGTGGCTCCAAATGGTTTCTGTATCCTCGTGACCCTCTaGAGTGCTGAATGCTGTCAAAGCCCTCCTCTCCCTACATCAATT +
Preference number: 5 (lower is better)
Translates to: EAEVAPNGFCILVTL*SAECCQSPPLPTSI
Trigger: AATTGATGTAGGGAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGCCACCTCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGCTTGCTCTAGATTTCTaGGGTGACCTCGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWLALDF*GDLALL
Trigger: AAGCAGAGCGAGGTCACCCAAGAAATCTAGAGCAAG...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAAGGCTGAACGTCTTCTaGCCAGACATCAGAATGTTG +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLRLNVF*PDIRML
Trigger: CAACATTCTGATGTCTGGCAAGAAGACGTTCAGCCT...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGTTCAAAACAATGTCCTaGTACTGGGGGTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLFKTMS*YWGFSL
Trigger: CAGACTGAACCCCCAGTACAAGGACATTGTTTTGAA...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCGGACAGCGTTTTTGTTaGGGCTTCTTCCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGGQRFC*GFFLFR
Trigger: GCGGAAAAGGAAGAAGCCCAAACAAAAACGCTGTCC...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS GCA 90 bp CCATTTTATACATGTCCTGTCTCCTCTGAACCTTCTCCACACCTTTaGTTTTGCCATGCATCCAACAGCCAGATGTGGACTTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PFYTCPVSSEPSPHL*FCHASNSQMWTCSR
Trigger: CCGGGAGCAAGTCCACATCTGGCTGTTGGATGCATGGCAAAAGCAAAGGTGTGGAGAAGGTTCAGAGGAGACAGGACATGTATAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ATGCCTAATTCTGGAGGTCTCAGAGGTCCAAGTGGGAGTGGGTACCATGAATGGACAGCGAGGGTTTGTTaGGGCCGATTCTTAATAGGA +
Preference number: 5 (lower is better)
Translates to: MPNSGGLRGPSGSGYHEWTARVC*GRFLIG
Trigger: TCCTATTAAGAATCGGCCCAAACAAACCCTCGCTGT...CCATTCATGGTACCCACTCCCACTTGGACCTCTGAGACCTCCAGAATTAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTTGCAGCGGTGCGATCTaGGCTCACTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFCSGAI*AHCNLR
Trigger: GCGGAGATTGCAGTGAGCCAAGATCGCACCGCTGCA...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATGCGTCTACACATTATaGCGCACGGTTAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLCVYTL*RTVKSI
Trigger: GATGCTTTTAACCGTGCGCAATAATGTGTAGACGCA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CAGAAAAGTGGCACATTTGGGAACACAGCGAGAGAGGGAAAGTGGTaGGTGAAGGCCTCAATGGATTCTGAATTCCAAACTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: QKSGTFGNTAREGKW*VKASMDSEFQTLPP
Trigger: TGGGGGAAGAGTTTGGAATTCAGAATCCATTGAGGCCTTCACTCACCACTTTCCCTCTCTCGCTGTGTTCCCAAATGTGCCACTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp TCCTGGTTTATCCTACAGATTGCTGGGATACCCACTCCAGTATGTTaGGTTTCTGTCCCAGAAACCGACAAGCTGCAGACAAACCTTGGT +
Preference number: 5 (lower is better)
Translates to: SWFILQIAGIPTPVC*VSVPETDKLQTNLG
Trigger: ACCAAGGTTTGTCTGCAGCTTGTCGGTTTCTGGGACAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CCTGACGTGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGTTAGGGATGAGCTCTTaGGGAGGCTGCCACCTTGCC +
Preference number: 5 (lower is better)
Translates to: PDVRFFFYGNKVIQPSIKLGMSS*GGCHLA
Trigger: GGCAAGGTGGCAGCCTCCCAAAGAGCTCATCCCTAA...CTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCACGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCGGCGGGAGGGCAGTaGCCATCACTTGGCATTCAC +
Preference number: 5 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPAAGGQ*PSLGIH
Trigger: GTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTATATTGTTGCTGCTGCTaGATTTACTTCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLYCCCC*IYFCLG
Trigger: ACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATA...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACACGGGGTGGTGATTCCTaGGGCCCCCTCTGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTRGGDS*GPLCKR
Trigger: TCTCTTACAGAGGGGGCCCAAGGAATCACCACCCCG...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGAAGTCACAGAGGCCTaGGGTCGAGGTCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFEVTEA*GRGQLE
Trigger: TTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CAACAGCCAGATGTGGACTTGCTCCCGGGAATGGAGAGAAGAGGGTaGATAGACCCACGGCTTATACAAAAATTGATCAGAGCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: QQPDVDLLPGMERRG*IDPRLIQKLIRAEN
Trigger: GTTTTCTGCTCTGATCAATTTTTGTATAAGCCGTGGGTCTATTCACCCTCTTCTCTCCATTCCCGGGAGCAAGTCCACATCTGGCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp CAGGCTAAATTCCTAAGTGATTGGGGGACACCATGGGAAGCGATTTaGTGTCTGGAGTTGCCGGGAAGGGAAATTCAGTGCATGAATTAT +
Preference number: 5 (lower is better)
Translates to: QAKFLSDWGTPWEAI*CLELPGREIQCMNY
Trigger: ATAATTCATGCACTGAATTTCCCTTCCCGGCAACTCCAGACACCAAATCGCTTCCCATGGTGTCCCCCAATCACTTAGGAATTTAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GGTGGCTTTTCCCCAAGTCCTTCTCCATCACAAATAAGGCTGGGACATTATGAGAGGTGTTTGACCGCTTaGCCTGTCCATGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: GGFSPSPSPSQIRLGHYERCLTA*PVHESF
Trigger: AAAAGACTCATGGACAGGCAAAGCGGTCAAACACCT...CTCATAATGTCCCAGCCTTATTTGTGATGGAGAAGGACTTGGGGAAAAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTCCTGAGCTTCCAGACTaGTGTGTGGGAAGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLIPELPD*CVGRQV
Trigger: CACTTGCCTTCCCACACACAAGTCTGGAAGCTCAGG...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GAGGAGGCCGGATGGATTCCAGATGTGCTTTCTATACTAGCGATTCGCTTTCTCAACCAGGTGAGGGTTTaGTATCTTTTCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EEAGWIPDVLSILAIRFLNQVRV*YLFSLL
Trigger: GAGAAGGGAGAAAAGATACAAAACCCTCACCTGGTT...GAGAAAGCGAATCGCTAGTATAGAAAGCACATCTGGAATCCATCCGGCCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp CTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGCTGCTCTTTGGAGACAGTCCATaGCAAAATGCATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: LLISGGLLTNTDADTGLLFGDSP*QNACFT
Trigger: TGTGAAGCATGCATTTTGCAATGGACTGTCTCCAAA...GAGCAGCCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp GTGAGCCAGGCCAGCCGTCTGCTTCTGCTTCTCCTTCATAGGCTCTTTCTTTGGATATGCTACTTTTCATaGATGTCAAGAAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: VSQASRLLLLLLHRLFLWICYFS*MSRRQQ
Trigger: CTGTTGCCTTCTTGACATCAATGAAAAGTAGCATAT...CCAAAGAAAGAGCCTATGAAGGAGAAGCAGAAGCAGACGGCTGGCCTGGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CTGCTTCTCCTTCATAGGCTCTTTCTTTGGCCCATCTGGGGGCACAAGCTCCTGGCATATTGGTGCACATaGGTATCAAAGGTGATTATT +
Preference number: 5 (lower is better)
Translates to: LLLLHRLFLWPIWGHKLLAYWCT*VSKVII
Trigger: AATAATCACCTTTGATACCAATGTGCACCAATATGC...CAGGAGCTTGTGCCCCCAGATGGGCCAAAGAAAGAGCCTATGAAGGAGAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAGTCACTCTGGCGGATaGGTACTAACACTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFSHSGG*VLTLPG
Trigger: GCCTGGCAGTGTTAGTACCAATCCGCCAGAGTGACT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGCTTGGTGGTGTTGGTaGCTCTGGAAACCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFAWWCW*LWKPRG
Trigger: CCCCCGGGGTTTCCAGAGCAACCAACACCACCAAGC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAACTCCAGCGAGGGCGTaGAAAAAGGGCTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTTPARA*KKGSCQ
Trigger: TTGGCAGGAGCCCTTTTTCAACGCCCTCGCTGGAGT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CTTGAAATTCAGAGCCCTGAATATCAAATAGAGCATGGGTGCATGTaGGCCAACAGAAAAGTGGCACATTTGGGAACACAGCGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LEIQSPEYQIEHGCM*ANRKVAHLGTQRER
Trigger: CCTCTCTCGCTGTGTTCCCAAATGTGCCACTTTTCTGTTGGCTCACATGCACCCATGCTCTATTTGATATTCAGGGCTCTGAATTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGCCTGACAGCGAGGGTTaGTTTGGGCCGATTCTTAAT +
Preference number: 5 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQPDSEG*FGPILN
Trigger: ATTAAGAATCGGCCCAAACAAACCCTCGCTGTCAGG...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAACTCCAGCGAGGGCGTaGAAAAAGGGCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVTPARA*KKGSSV
Trigger: GACGGAGGAGCCCTTTTTCAACGCCCTCGCTGGAGT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358157.3
CDS-3UTR CAA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGAGCAGTCAGGGAGATaGTGCAGGCAGTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFEQSGR*CRQFQP
Trigger: GGGCTGGAACTGCCTGCACAATCTCCCTGACTGCTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGACCGCTCCGAGTTGTaGTGGTTGGCCACCTTACGG +
Preference number: 5 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFDRSEL*WLATLR
Trigger: CCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGGGTTCATGGCGGAGTaGAGCACAGCCAACACGATG +
Preference number: 5 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPGFMAE*STANTM
Trigger: CATCGTGTTGGCTGTGCTCAACTCCGCCATGAACCC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACGGGGTGGTGATTCCTaGGGCCCCCTCTGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRGGDS*GPLCKR
Trigger: TCTCTTACAGAGGGGGCCCAAGGAATCACCACCCCG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GAAAGACTCTGGAGCCCAAAGTGGACAAGGCACGTTGTTTACACTGAAGCGGGGGTCATACCACAAATATaGATACCTCCTAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ERLWSPKWTRHVVYTEAGVIPQI*IPPSGN
Trigger: ATTTCCACTAGGAGGTATCAATATTTGTGGTATGAC...CCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACTTTGGGCTCCAGAGTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GATCAGTGCCAGCTTTCAGGATGCTGTGAAACTGCCGGTGGCCACAGCTACTTAGTCATACCACAAATATaGATACCTCCTAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: DQCQLSGCCETAGGHSYLVIPQI*IPPSGN
Trigger: ATTTCCACTAGGAGGTATCAATATTTGTGGTATGAC...TAAGTAGCTGTGGCCACCGGCAGTTTCACAGCATCCTGAAAGCTGGCACTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGCGCCGGACAGCGTTTTaGTTTGGGCTTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQRRTAF*FGLLPF
Trigger: AAAAGGAAGAAGCCCAAACAAAAACGCTGTCCGGCG...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp TGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCAGTGGGAACCTCATTATaGCACTGTGGGGACTTCGTC +
Preference number: 5 (lower is better)
Translates to: CGSSSMATKLFNLALRSAVGTSL*HCGDFV
Trigger: GACGAAGTCCCCACAGTGCAATAATGAGGTTCCCAC...TGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGGCTGGGACATTATGAGCTATCTGGGCATAGTCCAGGGAACCCCAGATATGGATGTAGTCTCTACCCTTaGTATATGGTAGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: RLGHYELSGHSPGNPRYGCSLYP*YMVENQ
Trigger: CTGATTTTCTACCATATACAAAGGGTAGAGACTACA...TCCATATCTGGGGTTCCCTGGACTATGCCCAGATAGCTCATAATGTCCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp ACGCTCCTCCTCATTAGCGGTGGTCTTCTAACCAATACAGATGCTGACACTGGGAATATCTGGAAAATTTaGAAGCCAGGAAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: TLLLISGGLLTNTDADTGNIWKI*KPGKWS
Trigger: GCTCCATTTTCCTGGCTTCAAAATTTTCCAGATATT...CCCAGTGTCAGCATCTGTATTGGTTAGAAGACCACCGCTAATGAGGAGGAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTGACCTCGCTCTGCTTTaGGAGACAGTCCATTGCAAA +
Preference number: 5 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLIDLALL*ETVHCK
Trigger: TTTGCAATGGACTGTCTCCAAAAGCAGAGCGAGGTC...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp ACAGGGATGAATCCACAGGGATGTGGAAATAGGCTCTGTGAGGTGGCTAAAGGCGAGACATATGGCTTTTaGCAGACTAGTTTTGCATAT +
Preference number: 5 (lower is better)
Translates to: TGMNPQGCGNRLCEVAKGETYGF*QTSFAY
Trigger: ATATGCAAAACTAGTCTGCAAAAAGCCATATGTCTC...GCCTTTAGCCACCTCACAGAGCCTATTTCCACATCCCTGTGGATTCATCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAAGTGGACAAGGCACGTaGTTTACACTGAAGCGGGGT +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTSGQGT*FTLKRG
Trigger: ACCCCGCTTCAGTGTAAACAACGTGCCTTGTCCACT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCATTGATTTACTTCTGCTaGGGTCGAGCGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPLIYFC*GRAQAG
Trigger: TCCAGCCTGCGCTCGACCCAAGCAGAAGTAAATCAA...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTGGAGAGTGGCTGCTATaGTTGCTGCTGCTTGATTTA +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFGEWLL*LLLLDL
Trigger: TAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCC...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAGCCACGGCAACGCTGTaGGAGAAAGGCATGAAAAAC +
Preference number: 5 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPATATL*EKGMKN
Trigger: GTTTTTCATGCCTTTCTCCAACAGCGTTGCCGTGGC...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTCCCTACAGGATACAATaGTGTCCATTGCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFPYRIQ*CPLLSS
Trigger: AGAGGAAAGCAATGGACACAATTGTATCCTGTAGGG...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATCTCCCTACATCAATTaGGGGGACCTGGATTTTCTG +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTSPYIN*GDLDFL
Trigger: CAGAAAATCCAGGTCCCCCAAATTGATGTAGGGAGA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACGAGACCTCAAACACTaGCACTCAACCACACCTGGT +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRDLKH*HSTTPG
Trigger: ACCAGGTGTGGTTGAGTGCAAGTGTTTGAGGTCTCG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 90 bp CAGATGATAAAGGAAGGACAGGAAAGCAGTGACAATCACACTGACTaGGTCTGGCTTGAAATTCAGAGCCCTGAATATCAAATAGAGCAT +
Preference number: 5 (lower is better)
Translates to: QMIKEGQESSDNHTD*VWLEIQSPEYQIEH
Trigger: ATGCTCTATTTGATATTCAGGGCTCTGAATTTCAAGCCAGACTCAGTCAGTGTGATTGTCACTGCTTTCCTGTCCTTCCTTTATCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 90 bp TGGATTATCAACATTTACAAAGCAGGCCTCATCCCAAGAGTTAAGTaGTGGGCTAAAGGCCAGATTGATTTTGGATGCGTCTACACATTA +
Preference number: 5 (lower is better)
Translates to: WIINIYKAGLIPRVK*WAKGQIDFGCVYTL
Trigger: TAATGTGTAGACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTGGGATGAGGCCTGCTTTGTAAATGTTGATAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATTCAAAACAATGTCCTaGTACTGGGGGTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTFKTMS*YWGFSL
Trigger: CAGACTGAACCCCCAGTACAAGGACATTGTTTTGAA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACAACCACAGCCCTAAATTaGCTTCAGAGACACATGAAC +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTTTALN*LQRHMN
Trigger: GTTCATGTGTCTCTGAAGCAAATTTAGGGCTGTGGT...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAGAAAAGTGGCACATTaGGGAACACAGCGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRKVAH*GTQRER
Trigger: CCTCTCTCGCTGTGTTCCCAAATGTGCCACTTTTCT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 90 bp ATTATCAACATTTACAAAGCAGGCCTCATCCCAAGAGTTAAGTGCTaGGCTAAAGGCCAGATTGATTTTGGATGCGTCTACACATTATTG +
Preference number: 5 (lower is better)
Translates to: IINIYKAGLIPRVKC*AKGQIDFGCVYTLL
Trigger: CAATAATGTGTAGACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTGGGATGAGGCCTGCTTTGTAAATGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GACAATCTCGTCACTGATTTAACCCAACTGGCCTATTGTCTCTTACAGACACAGTCCAGCAAAATTCCTTaGCTAATGAGTATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DNLVTDLTQLAYCLLQTQSSKIP*LMSIFP
Trigger: AGGGAAAATACTCATTAGCAAAGGAATTTTGCTGGA...CTGTGTCTGTAAGAGACAATAGGCCAGTTGGGTTAAATCAGTGACGAGATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp TGCGGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCAATATATTCAGAGAGCTaGGCACATTACGGAAGACAC +
Preference number: 5 (lower is better)
Translates to: CGSSSMATKLFNLALRSAIYSES*AHYGRH
Trigger: GTGTCTTCCGTAATGTGCCAAGCTCTCTGAATATAT...TGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAAGGCTGAACGTCTTCTaGCCAGACATCAGAATGTTG +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVRLNVF*PDIRML
Trigger: CAACATTCTGATGTCTGGCAAGAAGACGTTCAGCCT...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp AGTAGCTGGGACTACAGGCACGTGCTATCGCATCCAGCTAATTTTTGTATTTTTAAGGCCAGATTGATTTaGGATGCGTCTACACATTAT +
Preference number: 5 (lower is better)
Translates to: SSWDYRHVLSHPANFCIFKARLI*DASTHY
Trigger: ATAATGTGTAGACGCATCCAAAATCAATCTGGCCTT...AAAAATACAAAAATTAGCTGGATGCGATAGCACGTGCCTGTAGTCCCAGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp GGTTCTTCTTCTATGGCAACAAAGTTATTCAACCTAGCATTAAGGTCTGCATCCCTGTGGAAGCCTAACTaGTTAATTGTCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSSSMATKLFNLALRSASLWKPN*LIVQGK
Trigger: TTTTCCTTGGACAATTAACAAGTTAGGCTTCCACAG...GGATGCAGACCTTAATGCTAGGTTGAATAACTTTGTTGCCATAGAAGAAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGGGTCAAAACGAAGTGTGTTCCCTTAAAAATCCAACAAGAAGTTCCTCTCTTACAAAGAAATATACCATaGGGAGTGTCCAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RVKTKCVPLKIQQEVPLLQRNIP*GVSKAR
Trigger: TCTGGCTTTGGACACTCCCAATGGTATATTTCTTTG...TAAGAGAGGAACTTCTTGTTGGATTTTTAAGGGAACACACTTCGTTTTGACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp AGCTGTTATCTCAGTTACGAACACAACGTACTGATTTTCCGTGGGAACCTCATTTCAGATTTTTCAAGATaGTGGCATGCTCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: SCYLSYEHNVLIFRGNLISDFSR*WHAQIL
Trigger: GAGAATTTGAGCATGCCACAATCTTGAAAAATCTGA...AATGAGGTTCCCACGGAAAATCAGTACGTTGTGTTCGTAACTGAGATAACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375851.7
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGAGTGGCTGCTATTGTaGCTGCTGCTTGATTTACTT +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVEWLLL*LLLDLL
Trigger: AAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CAACACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTGAGTGGCTGCTATTGTaGCTGCTGCTTGATTTACTT +
Preference number: 5 (lower is better)
Translates to: QHSNCVLMKVLQTCSLFFEWLLL*LLLDLL
Trigger: AAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTC...AAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp ACAATAGCTACAGAGAGCTCCAAGTCTCCCAAAGCAACTCATAACTATAACACATTCAAGGTTAGGGCTTaGAAACATTCCCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: TIATESSKSPKATHNYNTFKVRA*KHSLVN
Trigger: ATTTACCAGGGAATGTTTCAAAGCCCTAACCTTGAA...TGTGTTATAGTTATGAGTTGCTTTGGGAGACTTGGAGCTCTCTGTAGCTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp CACAGCAACTGTGTGCTTATGAAAGTTCTACAAACGTGTTCACTTTTCTTTCCAATATGCTACTTTTCATaGATGTCAAGAAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: HSNCVLMKVLQTCSLFFPICYFS*MSRRQQ
Trigger: CTGTTGCCTTCTTGACATCAATGAAAAGTAGCATAT...TGGAAAGAAAAGTGAACACGTTTGTAGAACTTTCATAAGCACACAGTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTACAAGTCAAATTCCACTaGCTCTGTAACATTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVQVKFH*LCNIFW
Trigger: CCAGAAAATGTTACAGAGCAAGTGGAATTTGACTTG...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS-3UTR CAA 90 bp TCTGAATCCACTTGTATAACCTGTTACCTGTGTGTTGTATGGAGATTCTATGTAGCATATTGGTGCACATaGGTATCAAAGGTGATTATT +
Preference number: 5 (lower is better)
Translates to: SESTCITCYLCVVWRFYVAYWCT*VSKVII
Trigger: AATAATCACCTTTGATACCAATGTGCACCAATATGC...TACATAGAATCTCCATACAACACACAGGTAACAGGTTATACAAGTGGATTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp CGCGGCGGTGCCGGGGCGCCCGGTCCTGCGCTCGAATaGCAGATGGGCTGGGAGGCCCGGCAGTCTCAGCGC +
Preference number: 6 (lower is better)
Translates to: RGGAGAPGPALE*QMGWEARQSQR
Trigger: GCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCACCGCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GTGCCGGGGCGCCCGGTCCTGCGCTCGAATGCCAGATaGGCTGGGAGGCCCGGCAGTCTCAGCGCTCGCGAC +
Preference number: 6 (lower is better)
Translates to: VPGRPVLRSNAR*AGRPGSLSARD
Trigger: GTCGCGAGCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCCGGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GGGGCGCCCGGTCCTGCGCTCGAATGCCAGATGGGCTaGGAGGCCCGGCAGTCTCAGCGCTCGCGACGTCGT +
Preference number: 6 (lower is better)
Translates to: GAPGPALECQMG*EARQSQRSRRR
Trigger: ACGACGTCGCGAGCGCTGAGACTGCCGGGCCTCCCAGCCCATCTGGCATTCGAGCGCAGGACCGGGCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 72 bp TCAGCGCTCGCGACGTCGTTCCCGGGCCTGGGGTCCTaGTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SALATSFPGLGS*SVASCSRLLVP
Trigger: AGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGGGAACGACGTCGCGAGCGCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CAA 90 bp TCCGGCTCGCCCTTCGGCCCCTGTTCCCAGGCCGGCCTCCAGACCTaGTCCTCATCGGGCGAGCTCCAGGTGCAGAAACCGGGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: SGSPFGPCSQAGLQT*SSSGELQVQKPGAQ
Trigger: CTGGGCGCCCGGTTTCTGCACCTGGAGCTCGCCCGATGAGGACAAGGTCTGGAGGCCGGCCTGGGAACAGGGGCCGAAGGGCGAGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334490.5
ENST00000375851.7
CDS GCA 72 bp TCGTTCCCGGGCCTGGGGTCCTGCTCGGTCGCGTCCTaGAGCCGCCTTCTGGTCCCTGAGTCCCTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: SFPGLGSCSVAS*SRLLVPESLLP
Trigger: GGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAGGACCCCAGGCCCGGGAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp CCCAGCGGGAACAGGCTTGGAACCAGGTCCGAGGTCTaGGCTTGGGCGGGCGCCTGTCGCCCTGACAGCGAG +
Preference number: 6 (lower is better)
Translates to: PSGNRLGTRSEV*AWAGACRPDSE
Trigger: CTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTTaGAACCAGGTCCGAGGTCTGGGCTTGGGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: ETGRPETQREQA*NQVRGLGLGGR
Trigger: GCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CAA 90 bp TCCAGGTGCAGAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTaGGAACCAGGTCCGAGGTCTGGGCTTGGGCGGGCGCCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: SRCRNRAPRDPAGTG*EPGPRSGLGRAPVA
Trigger: GGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTCTGCACCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS TCA 72 bp CTGCTCGGTCGCGTCCTGCAGCCGCCTTCTGGTCCCTaGGTCCCTGTTGCCCGTCCCCGGAACCGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LLGRVLQPPSGP*VPVARPRNRLP
Trigger: AGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACGCGACCGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334490.5
ENST00000358157.3
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GTGGCGCGCCCAAGTCCCCGTCGCGCCCGGGATCGGTaGGGATTTTGTTGGAAAGGTGGGTCCTTCGGCCCC +
Preference number: 6 (lower is better)
Translates to: VARPSPRRARDR*GFCWKGGSFGP
Trigger: GGGGCCGAAGGACCCACCTTTCCAACAAAATCCCCACCGATCCCGGGCGCGACGGGGACTTGGGCGCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375850.3
CDS CAA 72 bp AGAAACCGGGCGCCCAGAGACCCAGCGGGAACAGGCTaGGAACCAGGTCCGAGGTCTGGGCTTGGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: RNRAPRDPAGTG*EPGPRSGLGRA
Trigger: CGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCCGCTGGGTCTCTGGGCGCCCGGTTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 72 bp CGTCCTGCAGCCGCCTTCTGGTCCCTGAGTCCCTGTTaGCCGTCCCCGGAACCGGCTTCCTCGGCCTCAATC +
Preference number: 6 (lower is better)
Translates to: RPAAAFWSLSPC*PSPEPASSASI
Trigger: GATTGAGGCCGAGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334490.5
ENST00000375851.7
CDS GCA 72 bp CGTCCTGCAGCCGCCTTCTGGTCCCTGAGTCCCTGTTaGCCGTCCCCGGAACCGGCTTCCTCGGCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RPAAAFWSLSPC*PSPEPASSASC
Trigger: ACAAGAGGCCGAGGAAGCCGGTTCCGGGGACGGGCAACAGGGACTCAGGGACCAGAAGGCGGCTGCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375850.3
ENST00000648341.1
CDS GCA 72 bp GGCCATCAGGCTGTCTCCTGCCACCTCCGGTACCACTaGACAGTGCTGATGGGGACCGCGAGGGCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: GHQAVSCHLRYH*TVLMGTARALP
Trigger: CGGCAGAGCCCTCGCGGTCCCCATCAGCACTGTGCAGTGGTACCGGAGGTGGCAGGAGACAGCCTGATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GGGAACAGGCTTGGAACCAGGTCCGAGGTCTGGGCTTaGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTTG +
Preference number: 6 (lower is better)
Translates to: GNRLGTRSEVWA*AGACRPDSEGL
Trigger: CAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGACCTCGGACCTGGTTCCAAGCCTGTTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CAA 72 bp CCCTTCGGCCCCTGTTCCCAGGCCGGCCTCCAGACCTaGTCCTCATCGGGCGAGCTCCAGGTGCAGAAACCG +
Preference number: 6 (lower is better)
Translates to: PFGPCSQAGLQT*SSSGELQVQKP
Trigger: CGGTTTCTGCACCTGGAGCTCGCCCGATGAGGACAAGGTCTGGAGGCCGGCCTGGGAACAGGGGCCGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334490.5
ENST00000375851.7
CDS CCA 72 bp TGGCCGAGCACCGGCTTGGGCTTGCAGGTGGGCGCCTaGCGCCGGACAGCGTTTTTGTTTGGGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WPSTGLGLQVGA*RRTAFLFGLLP
Trigger: AGGAAGAAGCCCAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375851.7
ENST00000648341.1
CDS CAA 72 bp CCTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTaGGGCTTGCAGGTGGGCGCCTGGCGCCGGACAGCG +
Preference number: 6 (lower is better)
Translates to: PDHFFCNWPSTG*GLQVGAWRRTA
Trigger: CGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 72 bp TGTGCTCTGCCTGGAACTGCCCTGACCCTTCCCAGCTaGCGCCTCCTGAAGTCACAGAGGCCTTGGGTCGAG +
Preference number: 6 (lower is better)
Translates to: CALPGTALTLPS*RLLKSQRPWVE
Trigger: CTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCTGGGAAGGGTCAGGGCAGTTCCAGGCAGAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp CTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTTaGGCTTGCAGGTGGGCGCCTGGCGCCGGACAGCGT +
Preference number: 6 (lower is better)
Translates to: LTISFVTGRAPA*ACRWAPGAGQR
Trigger: ACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp TTTGTAACTGGCCGAGCACCGGCTTGGGCTTGCAGGTaGGCGCCTGGCGCCGGACAGCGTTTTTGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: FVTGRAPAWACR*APGAGQRFCLG
Trigger: GCCCAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375851.7
ENST00000648341.1
CDS CAA 72 bp TCCCCCGCACCGGCTGGAGACGCGGCGGGAGGGCAGTaGCCATCACTTGGCATTCACAGACGATTAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPAPAGDAAGGQ*PSLGIHRRLAP
Trigger: TGGAGCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCGCGTCTCCAGCCGGTGCGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp GGGTCTCGTTCCCCCGCACCGGCTGGAGACGCGGCGGGAGGGCAGTaGCCATCACTTGGCATTCACAGACGATTAGCTCCAAAATCCACG +
Preference number: 6 (lower is better)
Translates to: GSRSPAPAGDAAGGQ*PSLGIHRRLAPKST
Trigger: CGTGGATTTTGGAGCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCGCGTCTCCAGCCGGTGCGGGGGAACGAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 72 bp ACTGGGGCCAGAGCCCTCACCATGCTGCCAAATGGATaGCCTGCCCGGCTCACATTGCAACCAGAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: TGARALTMLPNG*PARLTLQPEGP
Trigger: TGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GGCCAGAGCCCTCACCATGCTGCCAAATGGATGACCTaGCCGGCTCACATTGCAACCAGAGGGGCCATCACC +
Preference number: 6 (lower is better)
Translates to: GQSPHHAAKWMT*PAHIATRGAIT
Trigger: GGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GTCCGCAGCAGTGCCATGGACCGCTCCGAGTTGTTGTaGTTGGCCACCTTACGGCTGCTGGACTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: VRSSAMDRSELL*LATLRLLDFTR
Trigger: CCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp CTTCCCAGCTGCCGCCTCCTGAAGTCACAGAGGCCTTaGGTCGAGGTCAGCTGGAATGCCAAGTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: LPSCRLLKSQRP*VEVSWNAKCWQ
Trigger: CTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp ACGGTCCGCAGCAGTGCCATGGACCGCTCCGAGTTGTaGTGGTTGGCCACCTTACGGCTGCTGGACTTCACC +
Preference number: 6 (lower is better)
Translates to: TVRSSAMDRSEL*WLATLRLLDFT
Trigger: GGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 72 bp ACCACGGTCCGCAGCAGTGCCATGGACCGCTCCGAGTaGTTGTGGTTGGCCACCTTACGGCTGCTGGACTTC +
Preference number: 6 (lower is better)
Translates to: TTVRSSAMDRSE*LWLATLRLLDF
Trigger: GAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp TGCCCTGACCCTTCCCAGCTGCCGCCTCCTGAAGTCACAGAGGCCTaGGGTCGAGGTCAGCTGGAATGCCAAGTGCTGGCAGAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: CPDPSQLPPPEVTEA*GRGQLECQVLAERL
Trigger: AAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAGGCGGCAGCTGGGAAGGGTCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GAACACGCTCACCACAATCACCACGGTCCGCAGCAGTaGCATGGACCGCTCCGAGTTGTTGTGGTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: EHAHHNHHGPQQ*HGPLRVVVVGH
Trigger: GTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGGTGATTGTGGTGAGCGTGTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp CCATGCTGCCAAATGGATGACCTGCCCGGCTCACATTaGAACCAGAGGGGCCATCACCTGGCAGACAGCCAG +
Preference number: 6 (lower is better)
Translates to: PCCQMDDLPGSH*NQRGHHLADSQ
Trigger: CTGGCTGTCTGCCAGGTGATGGCCCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GGCATGGAGCAAAGGCAGTCTGTGAACAGTGCCCTGTaGCAGCATCCTCCCTCCCATAGCAACTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GMEQRQSVNSAL*QHPPSHSNWGQ
Trigger: CTGGCCCCAGTTGCTATGGGAGGGAGGATGCTGGCACAGGGCACTGTTCACAGACTGCCTTTGCTCCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp CGCTCACCACAATCACCACGGTCCGCAGCAGTGCCATaGACCGCTCCGAGTTGTTGTGGTTGGCCACCTTAC +
Preference number: 6 (lower is better)
Translates to: RSPQSPRSAAVP*TAPSCCGWPPY
Trigger: GTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGGTGATTGTGGTGAGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp AGCAACTGGGGCCAGAGCCCTCACCATGCTGCCAAATaGATGACCTGCCCGGCTCACATTGCAACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SNWGQSPHHAAK*MTCPAHIATRG
Trigger: CCCTCTGGTTGCAATGTGAGCCGGGCAGGTCATCCATTTGGCAGCATGGTGAGGGCTCTGGCCCCAGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp ATGCACCCTGGCATGAAGCCGGGTATGAAGACAACCTaGGCCATCAGGCTGTCTCCTGCCACCTCCGGTACC +
Preference number: 6 (lower is better)
Translates to: MHPGMKPGMKTT*AIRLSPATSGT
Trigger: GGTACCGGAGGTGGCAGGAGACAGCCTGATGGCCCAGGTTGTCTTCATACCCGGCTTCATGCCAGGGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp CGCAGCAGTGCCATGGACCGCTCCGAGTTGTTGTGGTaGGCCACCTTACGGCTGCTGGACTTCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RSSAMDRSELLW*ATLRLLDFTRK
Trigger: CTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp ACCACAATCACCACGGTCCGCAGCAGTGCCATGGACCGCTCCGAGTaGTTGTGGTTGGCCACCTTACGGCTGCTGGACTTCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TTITTVRSSAMDRSE*LWLATLRLLDFTRK
Trigger: CTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGTCCATGGCACTGCTGCGGACCGTGGTGATTGTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 72 bp CGCCCCAGGAACATTCATTTCAAAGGGAAGCGGGGCTaGGGTTCCGGCTTCATTCAGCAAGGCGTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RPRNIHFKGKRG*GSGFIQQGVQA
Trigger: GGCCTGCACGCCTTGCTGAATGAAGCCGGAACCTCAGCCCCGCTTCCCTTTGAAATGAATGTTCCTGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 72 bp TGCAGGATGAGGGGGCTGTGTGGGGCAGGTCTTCCTTaGCCTTCGGAGAGTGGCTGCTATTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CRMRGLCGAGLP*PSESGCYCCCC
Trigger: GCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS TCA 72 bp GGGCAGTGCCCATGCAGACACCGCACTCGTGAGCAGTaGGTCCAGAGCCCAGCGAAGACAGAACATCAACCT +
Preference number: 6 (lower is better)
Translates to: GQCPCRHRTREQ*VQSPAKTEHQP
Trigger: AGGTTGATGTTCTGTCTTCGCTGGGCTCTGGACTCACTGCTCACGAGTGCGGTGTCTGCATGGGCACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp CATGTCTGGGCAGTGCCCATGCAGACACCGCACTCGTaGGCAGTGAGTCCAGAGCCCAGCGAAGACAGAACA +
Preference number: 6 (lower is better)
Translates to: HVWAVPMQTPHS*AVSPEPSEDRT
Trigger: TGTTCTGTCTTCGCTGGGCTCTGGACTCACTGCTCACGAGTGCGGTGTCTGCATGGGCACTGCCCAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp ATTTCTTTTGTAACTGGCCGAGCACCGGCTTGGGCTTaGAGGTGGGCGCCTGGCGCCGGACAGCGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: ISFVTGRAPAWA*RWAPGAGQRFC
Trigger: ACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GCGTTCTTGTCCATGATGCAGGATGAGGGGGCTGTGTaGGGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: AFLSMMQDEGAV*GRSSLTFGEWL
Trigger: CAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATCCTGCATCATGGACAAGAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp CGTGGGAAGATCCCGCACTTCCCAGATGGCATCCCCTaGATCCAGGCCCAGAAATCAGGTCTGTATGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGKIPHFPDGIP*IQAQKSGLYGL
Trigger: CAGCCCATACAGACCTGATTTCTGGGCCTGGATCCAGGGGATGCCATCTGGGAAGTGCGGGATCTTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp GGCTGCTATTGTTGCTGCTGCTTGATTTACTTCTGCTaGGGTCGAGCGCAGGCTGGATGGGTGAGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: GCYCCCCLIYFC*GRAQAGWVRRG
Trigger: CCCGCGCCTCACCCATCCAGCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp GATCCTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTTGGGCTaGCAGGTGGGCGCCTGGCGCCGGACAGCGTTTTTGTTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: DPDHFFCNWPSTGLG*QVGAWRRTAFLFGL
Trigger: AAGCCCAAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375851.7
ENST00000648341.1
CDS CAA 90 bp TGTCCAGATCCTGACCATTTCTTTTGTAACTGGCCGAGCACCGGCTaGGGCTTGCAGGTGGGCGCCTGGCGCCGGACAGCGTTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: CPDPDHFFCNWPSTG*GLQVGAWRRTAFLF
Trigger: AAACAAAAACGCTGTCCGGCGCCAGGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGATCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS GCA 72 bp CAGAGGCCTTGGGTCGAGGTCAGCTGGAATGCCAAGTaGTGGCAGAAAGGCTTATGTGTTGGCCAAGGCCCT +
Preference number: 6 (lower is better)
Translates to: QRPWVEVSWNAK*WQKGLCVGQGP
Trigger: AGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GGCTGGAGACGCGGCGGGAGGGCAGTTGCCATCACTTaGCATTCACAGACGATTAGCTCCAAAATCCACGAG +
Preference number: 6 (lower is better)
Translates to: GWRRGGRAVAIT*HSQTISSKIHE
Trigger: CTCGTGGATTTTGGAGCTAATCGTCTGTGAATGCCAAGTGATGGCAACTGCCCTCCCGCCGCGTCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp TCTCAGGGACACATGTGCTATGCCCGGCATGCACCCTaGCATGAAGCCGGGTATGAAGACAACCTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: SQGHMCYARHAP*HEAGYEDNLGH
Trigger: ATGGCCCAGGTTGTCTTCATACCCGGCTTCATGCCAGGGTGCATGCCGGGCATAGCACATGTGTCCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp AGGCCTTGGGTCGAGGTCAGCTGGAATGCCAAGTGCTaGCAGAAAGGCTTATGTGTTGGCCAAGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: RPWVEVSWNAKC*QKGLCVGQGPL
Trigger: CAGAGGGCCTTGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp ATGCAGGATGAGGGGGCTGTGTGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTGCTATTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: MQDEGAVWGRSS*TFGEWLLLLLL
Trigger: CAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGCCCCCTCATCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp GTGTGGGGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTGCTATTGTaGCTGCTGCTTGATTTACTTCTGCTTGGGTCGAGCGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: VWGRSSLTFGEWLLL*LLLDLLLLGSSAGW
Trigger: CCAGCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp GCTGTGTGGGGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTGCTATaGTTGCTGCTGCTTGATTTACTTCTGCTTGGGTCGAGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: AVWGRSSLTFGEWLL*LLLLDLLLLGSSAG
Trigger: GCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp GCCAGCCCTACTTGGCTTCCCATTCACCTGAGAAGAGACCATGTCTaGCCTGTAGGTTCTCCTGGAGGCAAACAGGACAGTCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: ASPTWLPIHLRRDHV*PVGSPGGKQDSPVG
Trigger: GCCCACTGGACTGTCCTGTTTGCCTCCAGGAGAACCTACAGGCAAGACATGGTCTCTTCTCAGGTGAATGGGAAGCCAAGTAGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 90 bp CGGCTTCATTCAGCAAGGCGTGCAGGCCAGACTCCAGCGAGGGCGTaGAAAAAGGGCTCCTGCCAACAGATAAAAAGAGGGAGCGACCAT +
Preference number: 6 (lower is better)
Translates to: RLHSARRAGQTPARA*KKGSCQQIKRGSDH
Trigger: ATGGTCGCTCCCTCTTTTTATCTGTTGGCAGGAGCCCTTTTTCAACGCCCTCGCTGGAGTCTGGCCTGCACGCCTTGCTGAATGAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp CGCGGTGCCTCTTGTTGGCGTCGTAAGGCCTCATTTTaGTCATTGTCAAGTGCCGCTCGATGGCGATGGCCA +
Preference number: 6 (lower is better)
Translates to: RGASCWRRKASF*SLSSAARWRWP
Trigger: TGGCCATCGCCATCGAGCGGCACTTGACAATGATCAAAATGAGGCCTTACGACGCCAACAAGAGGCACCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp CTTACGGCTGCTGGACTTCACCAGGAAGTAGATGCGTaGGTAGAGGATCACGATGGTCACCAGGATGGCCGT +
Preference number: 6 (lower is better)
Translates to: LTAAGLHQEVDA*VEDHDGHQDGR
Trigger: ACGGCCATCCTGGTGACCATCGTGATCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp CCACCTTACGGCTGCTGGACTTCACCAGGAAGTAGATaGGTGCGTAGAGGATCACGATGGTCACCAGGATGG +
Preference number: 6 (lower is better)
Translates to: PPYGCWTSPGSR*VRRGSRWSPGW
Trigger: CCATCCTGGTGACCATCGTGATCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp ACCGCTCCGAGTTGTTGTGGTTGGCCACCTTACGGCTaGTGGACTTCACCAGGAAGTAGATGCGTGCGTAGA +
Preference number: 6 (lower is better)
Translates to: TAPSCCGWPPYG*WTSPGSRCVRR
Trigger: TCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGCGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS GCA 72 bp AGTGGCTGCTATTGTTGCTGCTGCTTGATTTACTTCTaGTTGGGTCGAGCGCAGGCTGGATGGGTGAGGCGC +
Preference number: 6 (lower is better)
Translates to: SGCYCCCCLIYF*LGRAQAGWVRR
Trigger: GCGCCTCACCCATCCAGCCTGCGCTCGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp TATCGTTGTCCAGATCCTGACCATTTCTTTTGTAACTaGCCGAGCACCGGCTTGGGCTTGCAGGTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: YRCPDPDHFFCN*PSTGLGLQVGA
Trigger: GGCGCCCACCTGCAAGCCCAAGCCGGTGCTCGGCCAGTTACAAAAGAAATGGTCAGGATCTGGACAACGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp GCTCCGAGTTGTTGTGGTTGGCCACCTTACGGCTGCTaGACTTCACCAGGAAGTAGATGCGTGCGTAGAGGA +
Preference number: 6 (lower is better)
Translates to: APSCCGWPPYGC*TSPGSRCVRRG
Trigger: TCCTCTACGCACGCATCTACTTCCTGGTGAAGTCCAGCAGCCGTAAGGTGGCCAACCACAACAACTCGGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp CTCCTCGAGCTGTGGCTCACCCATGCCAGCCCTACTTaGCTTCCCATTCACCTGAGAAGAGACCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLELWLTHASPT*LPIHLRRDHVL
Trigger: CAAGACATGGTCTCTTCTCAGGTGAATGGGAAGCCAAGTAGGGCTGGCATGGGTGAGCCACAGCTCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp ACAGTGACATCGTGGGAAGATCCCGCACTTCCCAGATaGCATCCCCTGGATCCAGGCCCAGAAATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: TVTSWEDPALPR*HPLDPGPEIRS
Trigger: AGACCTGATTTCTGGGCCTGGATCCAGGGGATGCCATCTGGGAAGTGCGGGATCTTCCCACGATGTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp AGTCCCTTGAAGATCCAGGGCTTGCCTGGGTGGGGCTaGGAAGCAGAGGTGGCTCCAAATGGTTTCTGTATC +
Preference number: 6 (lower is better)
Translates to: SPLKIQGLPGWG*EAEVAPNGFCI
Trigger: GATACAGAAACCATTTGGAGCCACCTCTGCTTCTCAGCCCCACCCAGGCAAGCCCTGGATCTTCAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GAAGTCACAGAGGCCTTGGGTCGAGGTCAGCTGGAATaGCAAGTGCTGGCAGAAAGGCTTATGTGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: EVTEALGRGQLE*QVLAERLMCWP
Trigger: TGGCCAACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp GCTTGGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTaGTTTGGGCCGATTCTTAATAGGAGGATTAATACT +
Preference number: 6 (lower is better)
Translates to: AWAGACRPDSEG*FGPILNRRINT
Trigger: AGTATTAATCCTCCTATTAAGAATCGGCCCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CCA 72 bp CTCCTGAAGTCACAGAGGCCTTGGGTCGAGGTCAGCTaGAATGCCAAGTGCTGGCAGAAAGGCTTATGTGTT +
Preference number: 6 (lower is better)
Translates to: LLKSQRPWVEVS*NAKCWQKGLCV
Trigger: AACACATAAGCCTTTCTGCCAGCACTTGGCATTCCAGCTGACCTCGACCCAAGGCCTCTGTGACTTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GTGGCTCCAAATGGTTTCTGTATCCTCGTGACCCTCTaGAGTGCTGAATGCTGTCAAAGCCCTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: VAPNGFCILVTL*SAECCQSPPLP
Trigger: AGGGAGAGGAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp GGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTTGTTaGGGCCGATTCTTAATAGGAGGATTAATACTATCA +
Preference number: 6 (lower is better)
Translates to: GRAPVALTARVC*GRFLIGGLILS
Trigger: TGATAGTATTAATCCTCCTATTAAGAATCGGCCCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CAA 90 bp GAGGTCTGGGCTTGGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTaGTTTGGGCCGATTCTTAATAGGAGGATTAATACTATCATTATC +
Preference number: 6 (lower is better)
Translates to: EVWAWAGACRPDSEG*FGPILNRRINTIII
Trigger: GATAATGATAGTATTAATCCTCCTATTAAGAATCGGCCCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS TCA 72 bp AAGCAGAGGTGGCTCCAAATGGTTTCTGTATCCTCGTaGCCCTCTGGAGTGCTGAATGCTGTCAAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: KQRWLQMVSVSS*PSGVLNAVKAL
Trigger: GAGGGCTTTGACAGCATTCAGCACTCCAGAGGGTCACGAGGATACAGAAACCATTTGGAGCCACCTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GCTGTGTGGGGCAGGTCTTCCTTGACCTTCGGAGAGTaGCTGCTATTGTTGCTGCTGCTTGATTTACTTCTG +
Preference number: 6 (lower is better)
Translates to: AVWGRSSLTFGE*LLLLLLLDLLL
Trigger: CAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp CACCTTTGCTTTTGCCATGCATCCAACAGCCAGATGTaGACTTGCTCCCGGGAATGGAGAGAAGAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: HLCFCHASNSQM*TCSREWREEGE
Trigger: TTCACCCTCTTCTCTCCATTCCCGGGAGCAAGTCCACATCTGGCTGTTGGATGCATGGCAAAAGCAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GGCAGACAGCCAGCTATCCATGACACCACAGTGTCCTaGTTTATCCTACAGATTGCTGGGATACCCACTCCA +
Preference number: 6 (lower is better)
Translates to: GRQPAIHDTTVS*FILQIAGIPTP
Trigger: TGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGACACTGTGGTGTCATGGATAGCTGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp TCTGCCGTTTCCCACACGAACAGCCACTCATGCTCATaGAAAAGGCATGGAGCAAAGGCAGTCTGTGAACAG +
Preference number: 6 (lower is better)
Translates to: SAVSHTNSHSCS*KRHGAKAVCEQ
Trigger: CTGTTCACAGACTGCCTTTGCTCCATGCCTTTTCCATGAGCATGAGTGGCTGTTCGTGTGGGAAACGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp TTCCTAAGTGATTGGGGGACACCATGGGAAGCGATTTaGTGTCTGGAGTTGCCGGGAAGGGAAATTCAGTGC +
Preference number: 6 (lower is better)
Translates to: FLSDWGTPWEAI*CLELPGREIQC
Trigger: GCACTGAATTTCCCTTCCCGGCAACTCCAGACACCAAATCGCTTCCCATGGTGTCCCCCAATCACTTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp GGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTGCTATaGTTGCTGCTGCTTGATTTACTTCTGCTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: GRSSLTFGEWLL*LLLLDLLLLGS
Trigger: CGACCCAAGCAGAAGTAAATCAAGCAGCAGCAACAATAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CAA 90 bp TCTGGGCTTGGGCGGGCGCCTGTCGCCCTGACAGCGAGGGTTTGTTaGGGCCGATTCTTAATAGGAGGATTAATACTATCATTATCGTTG +
Preference number: 6 (lower is better)
Translates to: SGLGRAPVALTARVC*GRFLIGGLILSLSL
Trigger: CAACGATAATGATAGTATTAATCCTCCTATTAAGAATCGGCCCAAACAAACCCTCGCTGTCAGGGCGACAGGCGCCCGCCCAAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334490.5
ENST00000375850.3
ENST00000375851.7
ENST00000648341.1
CDS CAA 90 bp GTCCTGGTTTATCCTACAGATTGCTGGGATACCCACTCCAGTATGTaGGGTTTCTGTCCCAGAAACCGACAAGCTGCAGACAAACCTTGG +
Preference number: 6 (lower is better)
Translates to: VLVYPTDCWDTHSSM*GFCPRNRQAADKPW
Trigger: CCAAGGTTTGTCTGCAGCTTGTCGGTTTCTGGGACAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp ATGCTAACTAGTCCTCATCTAGGGCATGGGAGCTGGTaGCCCATTATCCCAGTTACTCAGGGAAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: MLTSPHLGHGSW*PIIPVTQGKAG
Trigger: TCCTGCTTTTCCCTGAGTAACTGGGATAATGGGTCACCAGCTCCCATGCCCTAGATGAGGACTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GAAAGGCTTATGTGTTGGCCAAGGCCCTCTGCTAACTaGAGAAAGAAAAAGCAGCCAAGTTCCAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: ERLMCWPRPSAN*RKKKQPSSKSR
Trigger: CCTGGACTTGGAACTTGGCTGCTTTTTCTTTCTGCAGTTAGCAGAGGGCCTTGGCCAACACATAAGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CCA 72 bp GCAATAAATAAGAACACAGCCGCAGAGCAGGGCGCATaGAGACGATCAGTTGCAGAAGATCCCATTCTGAAG +
Preference number: 6 (lower is better)
Translates to: AINKNTAAEQGA*RRSVAEDPILK
Trigger: CTTCAGAATGGGATCTTCTGCAACTGATCGTCTCCATGCGCCCTGCTCTGCGGCTGTGTTCTTATTTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358157.3
ENST00000375846.3
CDS CCA 72 bp ATCCTACAGATTGCTGGGATACCCACTCCAGTATGTTaGGTTTCTGTCCCAGAAACCGACAAGCTGCAGACA +
Preference number: 6 (lower is better)
Translates to: ILQIAGIPTPVC*VSVPETDKLQT
Trigger: TGTCTGCAGCTTGTCGGTTTCTGGGACAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp TATCCTACAGATTGCTGGGATACCCACTCCAGTATGTaGGGTTTCTGTCCCAGAAACCGACAAGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: YPTDCWDTHSSM*GFCPRNRQAAD
Trigger: GTCTGCAGCTTGTCGGTTTCTGGGACAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 90 bp AGCCAGCTATCCATGACACCACAGTGTCCTGGTTTATCCTACAGATaGCTGGGATACCCACTCCAGTATGTTGGGTTTCTGTCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: SQLSMTPQCPGLSYR*LGYPLQYVGFLSQK
Trigger: TTTCTGGGACAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGACACTGTGGTGTCATGGATAGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp AGAGGGAAAGTGGTGAGTGAAGGCCTCAATGGATTCTaGATTCCAAACTCTTCCCCCACGAGACCTCAAACA +
Preference number: 6 (lower is better)
Translates to: RGKVVSEGLNGF*IPNSSPTRPQT
Trigger: TGTTTGAGGTCTCGTGGGGGAAGAGTTTGGAATTCAGAATCCATTGAGGCCTTCACTCACCACTTTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp TCCATGACACCACAGTGTCCTGGTTTATCCTACAGATaGCTGGGATACCCACTCCAGTATGTTGGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SMTPQCPGLSYR*LGYPLQYVGFL
Trigger: CAGAAACCCAACATACTGGAGTGGGTATCCCAGCAATCTGTAGGATAAACCAGGACACTGTGGTGTCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp GAATTCCAAACTCTTCCCCCACGAGACCTCAAACACTaGCACTCAACCACACCTGGTAATATCGATCAGCCT +
Preference number: 6 (lower is better)
Translates to: EFQTLPPRDLKH*HSTTPGNIDQP
Trigger: AGGCTGATCGATATTACCAGGTGTGGTTGAGTGCAAGTGTTTGAGGTCTCGTGGGGGAAGAGTTTGGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 90 bp AAGCAGGCCTCATCCCAAGAGTTAAGTGCTGGGCTAAAGGCCAGATaGATTTTGGATGCGTCTACACATTATTGCGCACGGTTAAAAGCA +
Preference number: 6 (lower is better)
Translates to: KQASSQELSAGLKAR*ILDASTHYCARLKA
Trigger: TGCTTTTAACCGTGCGCAATAATGTGTAGACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTGGGATGAGGCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 90 bp ATGGATTCTGAATTCCAAACTCTTCCCCCACGAGACCTCAAACACTaGCACTCAACCACACCTGGTAATATCGATCAGCCTTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: MDSEFQTLPPRDLKH*HSTTPGNIDQPSVM
Trigger: CATCACAGAAGGCTGATCGATATTACCAGGTGTGGTTGAGTGCAAGTGTTTGAGGTCTCGTGGGGGAAGAGTTTGGAATTCAGAATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp GATGTGGACTTGCTCCCGGGAATGGAGAGAAGAGGGTaGATAGACCCACGGCTTATACAAAAATTGATCAGA +
Preference number: 6 (lower is better)
Translates to: DVDLLPGMERRG*IDPRLIQKLIR
Trigger: TCTGATCAATTTTTGTATAAGCCGTGGGTCTATTCACCCTCTTCTCTCCATTCCCGGGAGCAAGTCCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp CCTGACCCTACCATTTTATACATGTCCTGTCTCCTCTaGACCTTCTCCACACCTTTGCTTTTGCCATGCATC +
Preference number: 6 (lower is better)
Translates to: PDPTILYMSCLL*TFSTPLLLPCI
Trigger: GATGCATGGCAAAAGCAAAGGTGTGGAGAAGGTTCAGAGGAGACAGGACATGTATAAAATGGTAGGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp CAGAGCCCTGAATATCAAATAGAGCATGGGTGCATGTaGGCCAACAGAAAAGTGGCACATTTGGGAACACAG +
Preference number: 6 (lower is better)
Translates to: QSPEYQIEHGCM*ANRKVAHLGTQ
Trigger: CTGTGTTCCCAAATGTGCCACTTTTCTGTTGGCTCACATGCACCCATGCTCTATTTGATATTCAGGGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp AACATTTACAAAGCAGGCCTCATCCCAAGAGTTAAGTaGTGGGCTAAAGGCCAGATTGATTTTGGATGCGTC +
Preference number: 6 (lower is better)
Translates to: NIYKAGLIPRVK*WAKGQIDFGCV
Trigger: GACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTGGGATGAGGCCTGCTTTGTAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS TCA 72 bp AAGGAAGGACAGGAAAGCAGTGACAATCACACTGACTaGGTCTGGCTTGAAATTCAGAGCCCTGAATATCAA +
Preference number: 6 (lower is better)
Translates to: KEGQESSDNHTD*VWLEIQSPEYQ
Trigger: TTGATATTCAGGGCTCTGAATTTCAAGCCAGACTCAGTCAGTGTGATTGTCACTGCTTTCCTGTCCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS GCA 72 bp GTTAAGTGCTGGGCTAAAGGCCAGATTGATTTTGGATaGGTCTACACATTATTGCGCACGGTTAAAAGCATC +
Preference number: 6 (lower is better)
Translates to: VKCWAKGQIDFG*VYTLLRTVKSI
Trigger: GATGCTTTTAACCGTGCGCAATAATGTGTAGACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp CAAGAGTTAAGTGCTGGGCTAAAGGCCAGATTGATTTaGGATGCGTCTACACATTATTGCGCACGGTTAAAA +
Preference number: 6 (lower is better)
Translates to: QELSAGLKARLI*DASTHYCARLK
Trigger: TTTTAACCGTGCGCAATAATGTGTAGACGCATCCAAAATCAATCTGGCCTTTAGCCCAGCACTTAACTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375846.3
CDS CAA 72 bp AAAGGCCAGATTGATTTTGGATGCGTCTACACATTATaGCGCACGGTTAAAAGCATCTCATGGACAAGAGTT +
Preference number: 6 (lower is better)
Translates to: KGQIDFGCVYTL*RTVKSISWTRV
Trigger: AACTCTTGTCCATGAGATGCTTTTAACCGTGCGCAATAATGTGTAGACGCATCCAAAATCAATCTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375846.3