Pregenerated sensors for S100Z (Homo sapiens)
Ensembl gene IDs: ENSG00000171643Ensembl transcript IDs: ENST00000317593.9, ENST00000513010.5, ENST00000613039.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCACTTTATTTAGCCCTTaGTTAGCATTCACGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: QAKGTTKHIQCYSRQTPSTLFSP*LAFTNF Trigger: GAAGTTCGTGAATGCTAATCAAGGGCTAAATAAAGT...GGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCCAAAGCACTTTATTTAGCCCTTaGTTAGCATTCACGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: APYLIYEHGKGSSSFLQSTLFSP*LAFTNF Trigger: GAAGTTCGTGAATGCTAATCAAGGGCTAAATAAAGT...GCTTTGGAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | GCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTTGTCGGCAGCAGAACTaGCCACTCCAGAAGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AIPGRPRPESDDFQGCCFCRQQN*PLQKQA Trigger: GGCCTGCTTCTGGAGTGGTCAGTTCTGCTGCCGACA...AAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | GCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTCCATCTCGAGCTGGGTaGGCATGTCGGCAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: AIPGRPRPESDDFQGCCFPSRAG*ACRQQN Trigger: GTTCTGCTGCCGACATGCCCACCCAGCTCGAGATGG...AAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | AAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCATGGCCATCTCGAGCTaGGTGGGCATGTCGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KALLNTFSAIPGRPRPESMAISS*VGMSAA Trigger: TGCTGCCGACATGCCCACCCAGCTCGAGATGGCCAT...GCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | CTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTGTCGGCAGCAGAACTaGCCACTCCAGAAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNTFSAIPGRPRPESDDCRQQN*PLQKQA Trigger: GGCCTGCTTCTGGAGTGGTCAGTTCTGCTGCCGACA...ATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGCCATCTCGAGCTGGGTaGGCATGTCGGCAGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQAKGTTKHIQCYSRQPSRAG*ACRQQN Trigger: GTTCTGCTGCCGACATGCCCACCCAGCTCGAGATGG...CTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | TGCTGTAGACACTTCCTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCATGGCCATCTCGAGCTaGGTGGGCATGTCGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCRHFLTAPYLIYEHGKGMAISS*VGMSAA Trigger: TGCTGCCGACATGCCCACCCAGCTCGAGATGGCCAT...GCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAGGAAGTGTCTACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | CTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCACGAGAGGAATTCCGTaGGCTCTCGCTGCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTAPYLIYEHGKGSSSFLTRGIP*ALAAGA Trigger: TGCTCCTGCAGCGAGAGCTCACGGAATTCCTCTCGT...GAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | TGCTGTAGACACTTCCTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCACGAGAGGAATTCCGTaGGCTCTCGCTGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCRHFLTAPYLIYEHGKGTRGIP*ALAAGA Trigger: TGCTCCTGCAGCGAGAGCTCACGGAATTCCTCTCGT...GCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAGGAAGTGTCTACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | CTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTCCGTGAGCTCTCGCTaGAGGAGCAGTTTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNTFSAIPGRPRPESDDSVSSR*RSSFSS Trigger: GGAACTGAAACTGCTCCTGCAGCGAGAGCTCACGGA...ATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | GCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATAGCAACTGTCAGAGCTaGCACCATGACCACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLNTFSAIPGRPRPESDSNCQS*HHDHEF Trigger: GAATTCGTGGTCATGGTGGCAGCTCTGACAGTTGCT...ATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTCCACTTCTTCGTTGTCCTTATTaGCATCCAGGTCCTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PGRPRPESDDFQGCCFPLLRCPY*HPGPAL Trigger: TAGTGCAGGACCTGGATGCCAATAAGGACAACGAAG...AAGTGGAAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | GCAGCTTTCTCCAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTGCACATCACATTGGCTaGGGTTGCTGTAGACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFSKAPKPKALLNTFSAAHHIG*GCCRHF Trigger: GAAGTGTCTACAGCAACCTCAGCCAATGTGATGTGC...AGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTGGAGAAAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTCCACTTATCTCTTCCTTTCCTTaGCAGAATAGCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRPRPESDDFQGCCFPLISSFP*QNSGGR Trigger: TCTTCCACCGCTATTCTGGCAAGGAAAGGAAGAGAT...AAGTGGAAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | CATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATAGCAACTGTCAGAGCTaGCACCATGACCACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: HSVLFQADPVLRAMIFKDSNCQS*HHDHEF Trigger: GAATTCGTGGTCATGGTGGCAGCTCTGACAGTTGCT...ATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | AAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCCTTCGTTGTCCTTATTaGCATCCAGGTCCTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KALLNTFSAIPGRPRPESLRCPY*HPGPAL Trigger: TAGTGCAGGACCTGGATGCCAATAAGGACAACGAAG...GCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | CTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCGCACATCACATTGGCTaGGGTTGCTGTAGACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAPYLIYEHGKGSSSFLAHHIG*GCCRHF Trigger: GAAGTGTCTACAGCAACCTCAGCCAATGTGATGTGC...GAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | AAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCTTGGCATCCAGGTCCTaGACTATCTTATCAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KALLNTFSAIPGRPRPESLASRS*TILSTN Trigger: GTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAA...GCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | GCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATTTGGCATCCAGGTCCTaGACTATCTTATCAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLNTFSAIPGRPRPESDLASRS*TILSTN Trigger: GTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAA...ATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | ACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGAACTAAACACATTCAGTaGTATTCCAGGCAGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFSAIPGRPRPESDDFQGTKHIQ*YSRQTP Trigger: CGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGT...TCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | CAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACTAAACACATTCAGTaGTATTCCAGGCAGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSPQAKGTTKHIQCYSRQTKHIQ*YSRQTP Trigger: CGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGT...CTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATAACTGGGTTTCCTTTTaGCACGAGAGGAATTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNTFSAIPGRPRPESDDNWVSF*HERNSV Trigger: CACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTT...ATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATAACTGGGTTTCCTTTTaGCACGAGAGGAATTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSVLFQADPVLRAMIFKDNWVSF*HERNSV Trigger: CACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTT...ATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | AGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCATCTTATCAACCAACTaGGTTTCCTTTTGGCACGAG | + |
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Preference number: 4 (lower is better) Translates to: SAIPGRPRPESDDFQGCCILSTN*VSFWHE Trigger: CTCGTGCCAAAAGGAAACCCAGTTGGTTGATAAGAT...GCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | CATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATTCCTTACCTAATTTATaGGCATGGGAAGGGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSVLFQADPVLRAMIFKDSLPNL*AWEGLK Trigger: CTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGA...ATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR GCA 90 bp | CTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATATCTCTTCCTTTCCTTaGCAGAATAGCGGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LLNTFSAIPGRPRPESDDISSFP*QNSGGR Trigger: TCTTCCACCGCTATTCTGGCAAGGAAAGGAAGAGAT...ATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATATTTTTCTGGAGAGCTaGGTGTCTACACAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HSVLFQADPVLRAMIFKDIFLES*VSTQSQ Trigger: CTGACTCTGTGTAGACACCCAGCTCTCCAGAAAAAT...ATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS-3UTR CCA 90 bp | GCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATTTCAAAGCATTTTTCTaGAGAGCTGGGTGTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: ALLNTFSAIPGRPRPESDFKAFF*RAGCLH Trigger: GTGTAGACACCCAGCTCTCCAGAAAAATGCTTTGAA...ATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS-3UTR TCA 90 bp | AACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAATCCTTACCTAATTTATaGGCATGGGAAGGGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: NTFSAIPGRPRPESDDFQSLPNL*AWEGLK Trigger: CTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGA...TTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CCA 90 bp | CTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCCTGAATTTCTGGGCGTaGAGATTAGCAAGCCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LTAPYLIYEHGKGSSSFLLNFWA*RLASRF Trigger: AAAACGGCTTGCTAATCTCCACGCCCAGAAATTCAG...GAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS-3UTR CCA 90 bp | CATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATATCTTATCAACCAACTaGGTTTCCTTTTGGCACGAG | + |
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Preference number: 4 (lower is better) Translates to: HSVLFQADPVLRAMIFKDILSTN*VSFWHE Trigger: CTCGTGCCAAAAGGAAACCCAGTTGGTTGATAAGAT...ATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR TCA 90 bp | GCAGCTTTCTCCAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTACTTTATTTAGCCCTTaGTTAGCATTCACGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: AAFSKAPKPKALLNTFSATLFSP*LAFTNF Trigger: GAAGTTCGTGAATGCTAATCAAGGGCTAAATAAAGT...AGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTGGAGAAAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS TCA 90 bp | TGTCCATGGCCATCTCGAGCTGGGTGGGCATGTCGGCAGCAGAACTaGCCACTCCAGAAGCAGGCCACCAAACCCGGGGAGAAGACACTA | + |
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Preference number: 5 (lower is better) Translates to: CPWPSRAGWACRQQN*PLQKQATKPGEKTL Trigger: TAGTGTCTTCTCCCCGGGTTTGGTGGCCTGCTTCTGGAGTGGTCAGTTCTGCTGCCGACATGCCCACCCAGCTCGAGATGGCCATGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS TCA 90 bp | TGTCCATGGCCATCTCGAGCTGGGTGGGCATGTCGGCAGCAGAACTaGCCACTCCAGAAGCAGGCCACCAAACCCGGGGAGAAGACACTT | + |
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Preference number: 5 (lower is better) Translates to: CPWPSRAGWACRQQN*PLQKQATKPGEKTL Trigger: AAGTGTCTTCTCCCCGGGTTTGGTGGCCTGCTTCTGGAGTGGTCAGTTCTGCTGCCGACATGCCCACCCAGCTCGAGATGGCCATGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613039.1 |
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| CDS GCA 90 bp | CCAGAAGCAGGCCACCAAACCCGGGGAGAAGACACTATTAAGGAATaGGATGACTCAGCCGAGACACGGGACTGTATGCTGTATCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PEAGHQTRGEDTIKE*DDSAETRDCMLYPL Trigger: CAAAGGATACAGCATACAGTCCCGTGTCTCGGCTGAGTCATCGCATTCCTTAATAGTGTCTTCTCCCCGGGTTTGGTGGCCTGCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS GCA 90 bp | AACTGGGTTTCCTTTTGGCACGAGAGGAATTCCGTGAGCTCTCGCTaGAGGAGCAGTTTCAGTTCCCCCTTGCTGAGCTTGAATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NWVSFWHERNSVSSR*RSSFSSPLLSLNLF Trigger: GAAGAGATTCAAGCTCAGCAAGGGGGAACTGAAACTGCTCCTGCAGCGAGAGCTCACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | CCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTCCACTTCAACTGGGTTTCCTTTaGGCACGAGAGGAATTCCGT | + |
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Preference number: 5 (lower is better) Translates to: PGRPRPESDDFQGCCFPLQLGFL*AREEFR Trigger: ACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTTG...AAGTGGAAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | CCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGATGCTGCTTTCCACTTAGTTTCAGTTCCCCCTaGCTGAGCTTGAATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGRPRPESDDFQGCCFPLSFSSP*LSLNLF Trigger: GAAGAGATTCAAGCTCAGCAAGGGGGAACTGAAACT...AAGTGGAAAGCAGCATCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | CAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTCCAGGCAGACCCCGTCCCAACTGGGTTTCCTTTaGGCACGAGAGGAATTCCGT | + |
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Preference number: 5 (lower is better) Translates to: QAKGTTKHIQCYSRQTPSQLGFL*AREEFR Trigger: ACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTTG...GGACGGGGTCTGCCTGGAATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | ACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAAGGAACTTCGTTGTCCTTATaGGCATCCAGGTCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TFSAIPGRPRPESDDFQGTSLSL*ASRSCT Trigger: AGTGCAGGACCTGGATGCCAATAAGGACAACGAAGT...TCCTTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | GCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCCAAAGCTCCCCCTTGCTGAGCTaGAATCTCTTCCTTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: APYLIYEHGKGSSSFLQSSPLLS*NLFLSL Trigger: CAAGGAAAGGAAGAGATTCAAGCTCAGCAAGGGGGA...GCTTTGGAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | AACACATTCAGTGCTATTCCAGGCAGACCCCGTCCTGAGAGCGATGATTTTCAATCCCCCTTGCTGAGCTaGAATCTCTTCCTTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: NTFSAIPGRPRPESDDFQSPLLS*NLFLSL Trigger: CAAGGAAAGGAAGAGATTCAAGCTCAGCAAGGGGGA...TTGAAAATCATCGCTCTCAGGACGGGGTCTGCCTGGAATAGCACTGAATGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | TGCTGTAGACACTTCCTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCACTTCGTTGTCCTTATaGGCATCCAGGTCCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: CCRHFLTAPYLIYEHGKGTSLSL*ASRSCT Trigger: AGTGCAGGACCTGGATGCCAATAAGGACAACGAAGT...GCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAGGAAGTGTCTACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | GCTTTCTCCAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTAGTTTCAGTTCCCCCTaGCTGAGCTTGAATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AFSKAPKPKALLNTFSAISFSSP*LSLNLF Trigger: GAAGAGATTCAAGCTCAGCAAGGGGGAACTGAAACT...AATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTGGAGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | GCTTTCTCCAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTATTATAAGGAGAATGCTCTaGTCTGAATTTCTGGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: AFSKAPKPKALLNTFSAIIRRML*SEFLGV Trigger: CACGCCCAGAAATTCAGACAAGAGCATTCTCCTTAT...AATAGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTGGAGAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS-3UTR CAA 90 bp | CTCACTGCTCCTTACCTAATTTATGAGCATGGGAAGGGCTCAAGCAGCTTTCTCTTAAAATCCACTTCGTaGTCCTTATTGGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTAPYLIYEHGKGSSSFLLKSTS*SLLASR Trigger: CCTGGATGCCAATAAGGACAACGAAGTGGATTTTAA...GAGAAAGCTGCTTGAGCCCTTCCCATGCTCATAAATTAGGTAAGGAGCAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000613039.1 |
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| CDS-3UTR CAA 90 bp | GCAGCTTTCTCCAAAGCCCCCAAGCCAAAGGCACTACTAAACACATTCAGTGCTAGGACATCGTGGTTTTaGAATATCCAGTGTCATAAT | + |
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Preference number: 5 (lower is better) Translates to: AAFSKAPKPKALLNTFSARTSWF*NIQCHN Trigger: ATTATGACACTGGATATTCAAAAACCACGATGTCCT...AGCACTGAATGTGTTTAGTAGTGCCTTTGGCTTGGGGGCTTTGGAGAAAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS GCA 90 bp | AATTCATTAAAATCCACTTCGTTGTCCTTATTGGCATCCAGGTCCTaGACTATCTTATCAACCAACTGGGTTTCCTTTTGGCACGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: NSLKSTSLSLLASRS*TILSTNWVSFWHER Trigger: CCTCTCGTGCCAAAAGGAAACCCAGTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTTTAATGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CCA 90 bp | ACTGTATGCTGTATCCTTTGTCTTCAAAGCATTTTTCTGGAGAGCTaGGTGTCTACACAGAGTCAGGGGCTTGTGAAATTACACTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: TVCCILCLQSIFLES*VSTQSQGLVKLHLD Trigger: GTCTAAGTGTAATTTCACAAGCCCCTGACTCTGTGTAGACACCCAGCTCTCCAGAAAAATGCTTTGAAGACAAAGGATACAGCATACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGGACATCGTGGTTTTTGAATATCCAGTGTCATAATGCCATGTCTTACTTAAAATCCACTTCGTaGTCCTTATTGGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SKRTSWFLNIQCHNAMSYLKSTS*SLLASR Trigger: CCTGGATGCCAATAAGGACAACGAAGTGGATTTTAA...GTAAGACATGGCATTATGACACTGGATATTCAAAAACCACGATGTCCTTTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317593.9 |
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| CDS TCA 72 bp | CCAACTGGGTTTCCTTTTGGCACGAGAGGAATTCCGTaGGCTCTCGCTGCAGGAGCAGTTTCAGTTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTGFPFGTRGIP*ALAAGAVSVPP Trigger: AGGGGGAACTGAAACTGCTCCTGCAGCGAGAGCTCACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS GCA 72 bp | GGCCACCAAACCCGGGGAGAAGACACTATTAAGGAATaGGATGACTCAGCCGAGACACGGGACTGTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: GHQTRGEDTIKE*DDSAETRDCML Trigger: CAGCATACAGTCCCGTGTCTCGGCTGAGTCATCGCATTCCTTAATAGTGTCTTCTCCCCGGGTTTGGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS CCA 72 bp | AAGATTCTAATCATGGTGTCCATGGCCATCTCGAGCTaGGTGGGCATGTCGGCAGCAGAACTGACCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: KILIMVSMAISS*VGMSAAELTTP Trigger: TGGAGTGGTCAGTTCTGCTGCCGACATGCCCACCCAGCTCGAGATGGCCATGGACACCATGATTAGAATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CCA 72 bp | TTGGCATCCAGGTCCTGCACTATCTTATCAACCAACTaGGTTTCCTTTTGGCACGAGAGGAATTCCGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LASRSCTILSTN*VSFWHERNSVS Trigger: GCTCACGGAATTCCTCTCGTGCCAAAAGGAAACCCAGTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CAA 72 bp | GACTCAGCCGAGACACGGGACTGTATGCTGTATCCTTaGTCTTCAAAGCATTTTTCTGGAGAGCTGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: DSAETRDCMLYP*SSKHFSGELGV Trigger: GACACCCAGCTCTCCAGAAAAATGCTTTGAAGACAAAGGATACAGCATACAGTCCCGTGTCTCGGCTGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS CAA 90 bp | GAATGCGATGACTCAGCCGAGACACGGGACTGTATGCTGTATCCTTaGTCTTCAAAGCATTTTTCTGGAGAGCTGGGTGTCTACACAGAG | + |
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Preference number: 6 (lower is better) Translates to: ECDDSAETRDCMLYP*SSKHFSGELGVYTE Trigger: CTCTGTGTAGACACCCAGCTCTCCAGAAAAATGCTTTGAAGACAAAGGATACAGCATACAGTCCCGTGTCTCGGCTGAGTCATCGCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS CAA 90 bp | ACACTTAGACCTGCTTCCTGTGCAGATGAGATAAGGAGAATGCTCTaGTCTGAATTTCTGGGCGTGGAGATTAGCAAGCCGTTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLRPASCADEIRRML*SEFLGVEISKPFSS Trigger: GGAGGAAAACGGCTTGCTAATCTCCACGCCCAGAAATTCAGACAAGAGCATTCTCCTTATCTCATCTGCACAGGAAGCAGGTCTAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS GCA 72 bp | AGGAATGCGATGACTCAGCCGAGACACGGGACTGTATaGTGTATCCTTTGTCTTCAAAGCATTTTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RNAMTQPRHGTV*CILCLQSIFLE Trigger: CTCCAGAAAAATGCTTTGAAGACAAAGGATACAGCATACAGTCCCGTGTCTCGGCTGAGTCATCGCATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS CAA 90 bp | GCCACCATGACCACGAATTCATTAAAATCCACTTCGTTGTCCTTATaGGCATCCAGGTCCTGCACTATCTTATCAACCAACTGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ATMTTNSLKSTSLSL*ASRSCTILSTNWVS Trigger: GGAAACCCAGTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTTTAATGAATTCGTGGTCATGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CAA 90 bp | GTCAGAGCTGCCACCATGACCACGAATTCATTAAAATCCACTTCGTaGTCCTTATTGGCATCCAGGTCCTGCACTATCTTATCAACCAAC | + |
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Preference number: 6 (lower is better) Translates to: VRAATMTTNSLKSTS*SLLASRSCTILSTN Trigger: GTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTTTAATGAATTCGTGGTCATGGTGGCAGCTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS GCA 72 bp | AAATCCACTTCGTTGTCCTTATTGGCATCCAGGTCCTaGACTATCTTATCAACCAACTGGGTTTCCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KSTSLSLLASRS*TILSTNWVSFW Trigger: CCAAAAGGAAACCCAGTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CAA 72 bp | GCCACCATGACCACGAATTCATTAAAATCCACTTCGTaGTCCTTATTGGCATCCAGGTCCTGCACTATCTTA | + |
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Preference number: 6 (lower is better) Translates to: ATMTTNSLKSTS*SLLASRSCTIL Trigger: TAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTTTAATGAATTCGTGGTCATGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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| CDS CCA 72 bp | TGTATCCTTTGTCTTCAAAGCATTTTTCTGGAGAGCTaGGTGTCTACACAGAGTCAGGGGCTTGTGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: CILCLQSIFLES*VSTQSQGLVKL Trigger: TAATTTCACAAGCCCCTGACTCTGTGTAGACACCCAGCTCTCCAGAAAAATGCTTTGAAGACAAAGGATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317593.9 ENST00000513010.5 |
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| CDS CAA 72 bp | ACCACGAATTCATTAAAATCCACTTCGTTGTCCTTATaGGCATCCAGGTCCTGCACTATCTTATCAACCAAC | + |
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Preference number: 6 (lower is better) Translates to: TTNSLKSTSLSL*ASRSCTILSTN Trigger: GTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTGGATTTTAATGAATTCGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317593.9 ENST00000513010.5 ENST00000613039.1 |
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