RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for S100PBP (Homo sapiens)

Ensembl gene IDs: ENSG00000116497

Ensembl transcript IDs: ENST00000356689.7, ENST00000373475.10, ENST00000373476.5, ENST00000474103.1, ENST00000475486.1, ENST00000477248.1, ENST00000482212.1, ENST00000524535.5, ENST00000525203.5, ENST00000526230.1, ENST00000527692.1, ENST00000529027.5, ENST00000530552.1, ENST00000530710.5, ENST00000531123.5, ENST00000531256.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGGGTGGGCAGCTCTTCAATAAAGACAGCAAGGAGGCCATCCTaGAGAGGTATATCCACGTCTAACAGGTTACAAGAATACTGCCAC +
Preference number: 1 (lower is better)
Translates to: LWVGSSSIKTARRPS*RGISTSNRLQEYCH
Trigger: GTGGCAGTATTCTTGTAACCTGTTAGACGTGGATATACCTCTTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTGCCCACCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR TCA 90 bp ACACTGGCTCACAGCCTGGTAAAGAATCTCTTCCTTATGGAAGATTaGACAATGATTTCTTTGAGGTACCAGAAAGTAGACTTTGCCTCT +
Preference number: 1 (lower is better)
Translates to: TLAHSLVKNLFLMED*TMISLRYQKVDFAS
Trigger: AGAGGCAAAGTCTACTTTCTGGTACCTCAAAGAAATCATTGTTCAATCTTCCATAAGGAAGAGATTCTTTACCAGGCTGTGAGCCAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR CCA 90 bp ACTACATTTAATTTTAACTATGCTATGGTCCCAAAGGTGGATGTTTaGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: TTFNFNYAMVPKVDV*HVSLHQPNLGQPGE
Trigger: TTCTCCAGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGGGACCATAGCATAGTTAAAATTAAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR TCA 90 bp AGTGCTCCTATTACACATTCAGTCTTAAAACCCCATGTACCAGGAGGGCACGAGAGGCGGAGGTTGTGGTaGGTGGAGATACGCCATTGC +
Preference number: 2 (lower is better)
Translates to: SAPITHSVLKPHVPGGHERRRLW*VEIRHC
Trigger: GCAATGGCGTATCTCCACTCACCACAACCTCCGCCT...CTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR CAA 90 bp GAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTaGCTTGAACCTGGGTGTTCTGGCTTAATGCTGGCTTTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: EVPESRLCLCREVGL*LEPGCSGLMLAFRR
Trigger: CCTCCTGAAAGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACAAGAACATGAAATGCTaGTCCAAGCAGGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDKNMKC*SKQDPG
Trigger: TCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp CCAAAGGTGGATGTTTGGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTCTCCAAGCAGGACCCTaGATAGGGACCTTCATTGCT +
Preference number: 2 (lower is better)
Translates to: PKVDVWHVSLHQPNLGQPLQAGP*IGTFIA
Trigger: AGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAG...AGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR GCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTAAGAACATGAAATGCTaGTCCAAGCAGGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIKNMKC*SKQDPG
Trigger: TCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTT...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp AGTGCTCCTATTACACATTCAGTCTTAAAACCCCATGTACCAGGAGGGCACGAGAGTAGACTTTGCCTCTaGAGAGAGGTGGGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: SAPITHSVLKPHVPGGHESRLCL*REVGLL
Trigger: CAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACT...CTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR GCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTACAATAGCACTAGCCTaGCCTAGAGTCAAGACTCTG +
Preference number: 2 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQITIALA*PRVKTL
Trigger: CAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGT...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTCTATGGTCCCAAAGGTaGATGTTTGGCATGTCTCAC +
Preference number: 2 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPLWSQR*MFGMSH
Trigger: GTGAGACATGCCAAACATCCACCTTTGGGACCATAG...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR GCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCAAAAGAACATGAAATaGTGCTCCAAGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIQKNMK*CSKQDP
Trigger: AGGGTCCTGCTTGGAGCAGCATTTCATGTTCTTTTG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAGCCTCTGCAGAGAGGTaGGTCTTTTGCTTGAACCTG +
Preference number: 2 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRASAER*VFCLNL
Trigger: CAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGC...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACGGAGGTTGTGGTGAGTaGAGATACGCCATTGCACTC +
Preference number: 2 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNGGCGE*RYAIAL
Trigger: GAGTGCAATGGCGTATCTCCACTCACCACAACCTCC...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR TCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGAACAGCAAAAGAACATaGAATGCTGCTCCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: TGYKNTATRILKSRVVTGNSKRT*NAAPSR
Trigger: CCTGCTTGGAGCAGCATTTCATGTTCTTTTGCTGTT...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR TCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGGCAAGGAGGCCATCCTaGAGAGGTATATCCACGTCT +
Preference number: 2 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLARRPS*RGISTS
Trigger: AGACGTGGATATACCTCTTCAGGATGGCCTCCTTGC...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGGAGAGGTGGGTCTTTTaGTTGAACCTGGGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLERWVF*LNLGVL
Trigger: CAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTC...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAAGTAGACTTTGCCTCTaGAGAGAGGTGGGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRSRLCL*REVGLL
Trigger: CAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGACTAGAGTCAAGACTCTaGGTGGGCAGCTCTTCAATA +
Preference number: 2 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRLESRL*VGSSSI
Trigger: TATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAG...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGACAAAAGAACATGAAATaGTGCTCCAAGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRQKNMK*CSKQDP
Trigger: AGGGTCCTGCTTGGAGCAGCATTTCATGTTCTTTTG...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGACAATAGCACTAGCCTaGCCTAGAGTCAAGACTCTG +
Preference number: 2 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLTIALA*PRVKTL
Trigger: CAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTCTCCAAGCAGGACCCTaGATAGGGACCTTCATTGCT +
Preference number: 2 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFLQAGP*IGTFIA
Trigger: AGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAG...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR TCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAAACAGCAAAAGAACATaGAATGCTGCTCCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSNSKRT*NAAPSR
Trigger: CCTGCTTGGAGCAGCATTTCATGTTCTTTTGCTGTT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTCCAGAAAGTAGACTTTaGCTCTGCAGAGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFPESRL*LCREVG
Trigger: ACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGG...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACCAGGTAATGCTTTTGTaGATAGGCTGTCACAACTAT +
Preference number: 2 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNQVMLL*IGCHNY
Trigger: ATAGTTGTGACAGCCTATGCACAAAAGCATTACCTG...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCCTAGAGTCAAGACTCTaGGTGGGCAGCTCTTCAATA +
Preference number: 2 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYILESRL*VGSSSI
Trigger: TATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAG...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR TCA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACCCAACTTTAAAATACTaGCAGGTATTCAGAGGATTC +
Preference number: 2 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNPTLKY*QVFRGF
Trigger: GAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGG...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR TCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCCAACTTTAAAATACTaGCAGGTATTCAGAGGATTC +
Preference number: 2 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLPTLKY*QVFRGF
Trigger: GAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR GCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTAATAGGATTCTTCTCCTaGTCCATCCTACTTATAATG +
Preference number: 2 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLIGFFS*SILLIM
Trigger: CATTATAAGTAGGATGGAGCAGGAGAAGAATCCTAT...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTACTAACACTCAAATTTaGGGTTCAGCAAATGAAACT +
Preference number: 2 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFTNTQI*GSANET
Trigger: AGTTTCATTTGCTGAACCCCAAATTTGAGTGTTAGT...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CAA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACAGGTGGGTCTTTTGCTaGAACCTGGGTGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDRWVFC*NLGVLA
Trigger: AGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CAA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTAGAGAGGTGGGTCTTTaGCTTGAACCTGGGTGTTCT +
Preference number: 3 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPREVGL*LEPGCS
Trigger: AGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR CAA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGATACCAACCGAACGCTaGCTTAAACACAGACACACA +
Preference number: 3 (lower is better)
Translates to: LRYQKVDFASAERWVFCLIPTER*LKHRHT
Trigger: TGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTAT...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR GCA 72 bp GATTTCTTTGAGGTACCAGAAAGTAGACTTTGCCTCTaGAGAGAGGTGGGTCTTTTGCTTGAACCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: DFFEVPESRLCL*REVGLLLEPGC
Trigger: ACACCCAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR TCA 72 bp GGCAGCTCTTCAATAAAGACAGCAAGGAGGCCATCCTaGAGAGGTATATCCACGTCTAACAGGTTACAAGAA +
Preference number: 3 (lower is better)
Translates to: GSSSIKTARRPS*RGISTSNRLQE
Trigger: TTCTTGTAACCTGTTAGACGTGGATATACCTCTTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR TCA 72 bp TTGTCAAGACCCCCATGGTGGGAATGTCGTCATGGATaGAGAAAGCAGTTAAATGCACCTAACACTTGCTTA +
Preference number: 3 (lower is better)
Translates to: LSRPPWWECRHG*RKQLNAPNTCL
Trigger: TAAGCAAGTGTTAGGTGCATTTAACTGCTTTCTTCATCCATGACGACATTCCCACCATGGGGGTCTTGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR-3UTR CAA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAGGTGGGTCTTTTGCTaGAACCTGGGTGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIRWVFC*NLGVLA
Trigger: AGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR-3UTR CAA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTAATACCAACCGAACGCTaGCTTAAACACAGACACACA +
Preference number: 3 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLIPTER*LKHRHT
Trigger: TGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTAT...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR CCA 72 bp AATTTTAACTATGCTATGGTCCCAAAGGTGGATGTTTaGCATGTCTCACTCCATCAACCTAATTTAGGGCAG +
Preference number: 3 (lower is better)
Translates to: NFNYAMVPKVDV*HVSLHQPNLGQ
Trigger: CTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGGGACCATAGCATAGTTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
3UTR CCA 72 bp GGATTCTTCTCCTGCTCCATCCTACTTATAATGTCCTaGATTGCCAACTTTAAAATACTGACAGGTATTCAG +
Preference number: 3 (lower is better)
Translates to: GFFSCSILLIMS*IANFKILTGIQ
Trigger: CTGAATACCTGTCAGTATTTTAAAGTTGGCAATCCAGGACATTATAAGTAGGATGGAGCAGGAGAAGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR CCA 72 bp CCACAGAATGGAGGCTCCCTAACTAACACTCAAATTTaGGGTTCAGCAAATGAAACTAAATATCAACTGACA +
Preference number: 3 (lower is better)
Translates to: PQNGGSLTNTQI*GSANETKYQLT
Trigger: TGTCAGTTGATATTTAGTTTCATTTGCTGAACCCCAAATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR CCA 72 bp CTACATTTAATTTTAACTATGCTATGGTCCCAAAGGTaGATGTTTGGCATGTCTCACTCCATCAACCTAATT +
Preference number: 3 (lower is better)
Translates to: LHLILTMLWSQR*MFGMSHSINLI
Trigger: AATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGGGACCATAGCATAGTTAAAATTAAATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACAGACGCTGGAACCGATaGTGGCTTCGCATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDRRWNR*WLRMFL
Trigger: CAGGAACATGCGAAGCCACCATCGGTTCCAGCGTCT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCGTAGTTTCGCGTGGTaGGGTCCGAAGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIRSFAW*GPKDAA
Trigger: GGCAGCATCCTTCGGACCTCACCACGCGAAACTACG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGAAGTCTGGGAGACGCTaGAACCGATGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLKSGRR*NRWWLR
Trigger: GCGAAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACGTCAGACTGTATCTTTaGAGATGTTTCTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDVRLYL*RCFCRR
Trigger: CCGCCGACAGAAACATCTGCAAAGATACAGTCTGAC...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACGCACATCATTTTGTGTaGAGCTGCTGGAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDAHHFV*SCWSNL
Trigger: GAGATTGCTCCAGCAGCTCCACACAAAATGATGTGC...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCGCTGGAACCGATGGTaGCTTCGCATGTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIRWNRW*LRMFLS
Trigger: TGACAGGAACATGCGAAGCCACCATCGGTTCCAGCG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGCCTCTGCAGAGAGGTaGGTCTTTTGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADASAER*VFCLNL
Trigger: CAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTTTCAGAGGGCACCCGTaGGCACATCATTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIFRGHP*AHHFVW
Trigger: CCACACAAAATGATGTGCTCACGGGTGCCCTCTGAA...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACTCTGGGTCTTCTATATaGGCAATGACACTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDSGSSI*AMTLLR
Trigger: TCTCAGGAGTGTCATTGCTCATATAGAAGACCCAGA...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGACGTAGTTTCGCGTGGTaGGGTCCGAAGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRRSFAW*GPKDAA
Trigger: GGCAGCATCCTTCGGACCTCACCACGCGAAACTACG...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACAACCTGTCACTCATTTaGTTTGGCAAAGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDNLSLI*FGKGSA
Trigger: AGCACTGCCTTTGCCAAATCAAATGAGTGACAGGTT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACAGCAATCTCTGCCTTTaGCACGAGACCAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDSNLCL*HETKWK
Trigger: TTTCCATTTGGTCTCGTGGCAAAGGCAGAGATTGCT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGAGAGGTGGGTCTTTTaGTTGAACCTGGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADERWVF*LNLGVL
Trigger: CAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGCGCTGGAACCGATGGTaGCTTCGCATGTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGRWNRW*LRMFLS
Trigger: TGACAGGAACATGCGAAGCCACCATCGGTTCCAGCG...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGACTGTACGAGAAGTCTaGGAGACGCTGGAACCGATG +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLTVREV*ETLEPM
Trigger: CATCGGTTCCAGCGTCTCCCAGACTTCTCGTACAGT...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCTCCAAGCAGGACCCTaGATAGGGACCTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQILQAGP*IGTFIA
Trigger: AGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGGGAGGTTGTGGTGAGTaGAGATACGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLGGCGE*RYAIAL
Trigger: GAGTGCAATGGCGTATCTCCACTCACCACAACCTCC...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
3UTR CAA 72 bp GAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTaGCTTGAACCTGGGTGTTCTGGCTTAATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ESRLCLCREVGL*LEPGCSGLMLA
Trigger: AGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGGAGACTTGTCAAAATaGTTGACTCCCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADGDLSK*LTPTFL
Trigger: GAGGAAGGTGGGAGTCAATCATTTTGACAAGTCTCC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAAGGGCAAACCAGCAGTaGTTGGCAGGAAACCGTCCC +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRRANQQ*LAGNRP
Trigger: GGGACGGTTTCCTGCCAATCACTGCTGGTTTGCCCT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR GCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGGTGAGGTCCGAAGGATaGTGCCATTTTGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGVRSEG*CHFECC
Trigger: GCAGCACTCAAAATGGCAGCATCCTTCGGACCTCAC...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGGAGAGGTGGGTCTTTTaGTTGAACCTGGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLERWVF*LNLGVL
Trigger: CAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTC...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCCAGAAAGTAGACTTTaGCTCTGCAGAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIPESRL*LCREVG
Trigger: ACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATACAATAGCACTAGCCTaGCCTAGAGTCAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADTIALA*PRVKTL
Trigger: CAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGT...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGTTTGAAGAAGAGAGCTaGGGCCCATTCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGFEEES*GPFQAE
Trigger: CTCTGCCTGGAATGGGCCCCAGCTCTCTTCTTCAAA...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACTTAGGAGTCTCTGAATaGTCTGAGATCCGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDLGVSE*SEIREN
Trigger: ATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAA...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGCTCCAAGCAGGACCCTaGATAGGGACCTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGLQAGP*IGTFIA
Trigger: AGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAG...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAGCCCACCGTGCCCACTaGCTCCACCTTTTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSAHRAH*LHLFPS
Trigger: AGACGGGAAAAGGTGGAGCCAGTGGGCACGGTGGGC...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR TCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGTCCCAGGCTGTACGATaGATTTTTCTCTCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGSQAVR*IFLSGS
Trigger: ACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGA...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGCAGAGTTATTGGGGCTaGTCCCTTCAGATTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLQSYWG*SLQIQY
Trigger: GTACTGAATCTGAAGGGATCAGCCCCAATAACTCTG...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACTCATTGCTGATGGGATaGCACAAATTAACTGTACGA +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDSLLMG*HKLTVR
Trigger: TCGTACAGTTAATTTGTGTCATCCCATCAGCAATGA...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGTCTCCCTTCTCAACATaGCCACCATCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGSPFST*PPSSSP
Trigger: TGGGGAAGATGATGGTGGGCATGTTGAGAAGGGAGA...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTAGTAGACTTTGCCTCTaGAGAGAGGTGGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPSRLCL*REVGLL
Trigger: CAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTACAATAGCACTAGCCTaGCCTAGAGTCAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPTIALA*PRVKTL
Trigger: CAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTCCTCTAGGAGGGTTGTaGCCCGCTCAGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFPLGGL*PAQAPQ
Trigger: CTGAGGCGCCTGAGCGGGGCACAACCCTCCTAGAGG...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR CCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATTGTCCCTTCACTCCTTaGGTTTTCTGTAGGGAACTA +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADCPFTP*VFCREL
Trigger: TAGTTCCCTACAGAAAACCCAAGGAGTGAAGGGACA...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTTTGAAAGTTATTGTTTaGAGAAGAGAGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQILKVIV*RRELGP
Trigger: GGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAA...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp CCAAAGGTGGATGTTTGGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTAGGATGCTGCCATTTTaGGTGCTGCATATGATGAAC +
Preference number: 4 (lower is better)
Translates to: PKVDVWHVSLHQPNLGQPRMLPF*VLHMMN
Trigger: GTTCATCATATGCAGCACTCAAAATGGCAGCATCCT...AGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAGCAAGGAGGCCATCCTaGAGAGGTATATCCACGTCT +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRARRPS*RGISTS
Trigger: AGACGTGGATATACCTCTTCAGGATGGCCTCCTTGC...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGTCTTCCCCAGAAGACTaGTCATATGATGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLSSPED*SYDGSS
Trigger: AGATGACCCATCATATGAGCAGTCTTCTGGGGAAGA...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACGTGAGGTCCGAAGGATaGTGCCATTTTGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNVRSEG*CHFECC
Trigger: GCAGCACTCAAAATGGCAGCATCCTTCGGACCTCAC...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGAAGAACATGAAATGCTaGTCCAAGCAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGKNMKC*SKQDPG
Trigger: TCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTT...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGGCACATCATTTTGTGTaGAGCTGCTGGAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGAHHFV*SCWSNL
Trigger: GAGATTGCTCCAGCAGCTCCACACAAAATGATGTGC...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGGGAATCCCAAGAAAATaGGGCACCGTCTTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGGIPRK*GTVFRQ
Trigger: TTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCC...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAACTGTACGAGAAGTCTaGGAGACGCTGGAACCGATG +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRTVREV*ETLEPM
Trigger: CATCGGTTCCAGCGTCTCCCAGACTTCTCGTACAGT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGTCACTCATTTGATTTaGCAAAGGCAGTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADVTHLI*QRQCSY
Trigger: ATAGGAGCACTGCCTTTGCCAAATCAAATGAGTGAC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTACAAACCAGCAGTGATTaGCAGGAAACCGTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLQTSSD*QETVPP
Trigger: AGGCGGGACGGTTTCCTGCCAATCACTGCTGGTTTG...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR TCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADFVEQE*LCLVFS
Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAGGCGGAGGTTGTGGTaGGTGGAGATACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIRRRLW*VEIRHC
Trigger: GCAATGGCGTATCTCCACTCACCACAACCTCCGCCT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGAATGTCGTCATGGATaGAGAAAGCAGTTAAATGCA +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADECRHG*RKQLNA
Trigger: TGCATTTAACTGCTTTCTTCATCCATGACGACATTC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGCAAAAGAACATGAAATaGTGCTCCAAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGQKNMK*CSKQDP
Trigger: AGGGTCCTGCTTGGAGCAGCATTTCATGTTCTTTTG...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACTCTTTAAGGCGAACATaGCAGATAATGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDSLRRT*QIMSFL
Trigger: AAGAAAACTCATTATCTGGCATGTTCGCCTTAAAGA...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTTGCCACGAGACCAAATaGAAAAAGGTTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQICHETK*KKVSVP
Trigger: AGGAACTGAAACCTTTTTCCATTTGGTCTCGTGGCA...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGTTTTTCAGTATCTTTaGACGAATCAGTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADVFQYL*TNQSRP
Trigger: AGGACGAGACTGATTCGTCCAAAGATACTGAAAAAC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAAGTCTGGGAGACGCTaGAACCGATGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIKSGRR*NRWWLR
Trigger: GCGAAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGCCAAAGGTGGATGTTTaGCATGTCTCACTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGPKVDV*HVSLHQ
Trigger: TTGATGGAGTGAGACATGCCAAACATCCACCTTTGG...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAACTTGTCAAAATGATTaGCTCCCACCTTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRTCQND*LPPSSG
Trigger: TCCGGAGGAAGGTGGGAGTCAATCATTTTGACAAGT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp CCAAAGGTGGATGTTTGGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PKVDVWHVSLHQPNLGQPFVEQE*LCLVFS
Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...AGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGATTCCTGTCAACCCACTaGGTCAGACTGTATCTTTGC +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRFLSTH*VRLYLC
Trigger: GCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAA...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGTCATTGCTGATGGGATaGCACAAATTAACTGTACGA +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLSLLMG*HKLTVR
Trigger: TCGTACAGTTAATTTGTGTCATCCCATCAGCAATGA...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATAAACTAAATATCAACTaGCACCACAATAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADKLNIN*HHNSTS
Trigger: GCTAGTGCTATTGTGGTGTCAGTTGATATTTAGTTT...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTATGCTGGAGCAATCTCTaGCTTTGCCACGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLCWSNL*LCHETK
Trigger: TTTGGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCA...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGATTTGGCAAAGGCAGTaGTCCTATTACACATTCAGT +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLIWQRQ*SYYTFS
Trigger: ACTGAATGTGTAATAGGAGCACTGCCTTTGCCAAAT...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTAGCATATTTTTACTCTaGTTTGTCAAGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPSIFLL*FVKTPM
Trigger: CATGGGGGTCTTGACAAAGCAGAGTAAAAATATGCT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTGTTTTTCAGTATCTTTaGACGAATCAGTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIVFQYL*TNQSRP
Trigger: AGGACGAGACTGATTCGTCCAAAGATACTGAAAAAC...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCATTTGAAGAAGAGAGCTaGGGCCCATTCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSFEEES*GPFQAE
Trigger: CTCTGCCTGGAATGGGCCCCAGCTCTCTTCTTCAAA...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp AGTGCTCCTATTACACATTCAGTCTTAAAACCCCATGTACCAGGAGGGCACGAGTTGGTTAGTGTCCTCTaGGTCTTCTATATGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SAPITHSVLKPHVPGGHELVSVL*VFYMSN
Trigger: ATTGCTCATATAGAAGACCCAGAGGACACTAACCAA...CTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGTTGGTTAGTGTCCTCTaGGTCTTCTATATGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRYQKVDFASAERWVFCLLVSVL*VFYMSN
Trigger: ATTGCTCATATAGAAGACCCAGAGGACACTAACCAA...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTTCAGAGGGCACCCGTaGGCACATCATTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIFRGHP*AHHFVW
Trigger: CCACACAAAATGATGTGCTCACGGGTGCCCTCTGAA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCAGAGTTATTGGGGCTaGTCCCTTCAGATTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLQSYWG*SLQIQY
Trigger: GTACTGAATCTGAAGGGATCAGCCCCAATAACTCTG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCGCAAGGAGGCCATCCTaGAGAGGTATATCCACGTCT +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIARRPS*RGISTS
Trigger: AGACGTGGATATACCTCTTCAGGATGGCCTCCTTGC...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTAAACTAAATATCAACTaGCACCACAATAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPKLNIN*HHNSTS
Trigger: GCTAGTGCTATTGTGGTGTCAGTTGATATTTAGTTT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTATATTGTTGGCTTAAATaGCCAAGCGTTCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLYCWLK*PSVPHV
Trigger: GACGTGGGGAACGCTTGGTCATTTAAGCCAACAATA...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGACTTGTCAAAATGATTaGCTCCCACCTTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLTCQND*LPPSPS
Trigger: ACTCGGGGAAGGTGGGAGTCAATCATTTTGACAAGT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCATTTTGTGTGGAGCTaGTGGAGCAATCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLHFVWS*WSNLCL
Trigger: AAGGCAGAGATTGCTCCAGCAGCTCCACACAAAATG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCATCTCCCTTCTCAACATaGCCACCATCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSSPFST*PPSSSP
Trigger: TGGGGAAGATGATGGTGGGCATGTTGAGAAGGGAGA...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTAAGGTCCGAAGGATGCTaGCATTTTGAGTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLRSEGC*HFECCI
Trigger: TATGCAGCACTCAAAATGGCAGCATCCTTCGGACCT...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGAGTAGACTTTGCCTCTaGAGAGAGGTGGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLSRLCL*REVGLL
Trigger: CAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp ATGTACCAGGAGGGCACGAGTCTTAGATTTTTGCCTAGGCAAAATCCTGTCCCTATAGAACTTCTCCTTTaGATTTTGGCCCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: MYQEGTSLRFLPRQNPVPIELLL*ILAPEF
Trigger: AAATTCTGGGGCCAAAATGCAAAGGAGAAGTTCTAT...AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp CCAAAGGTGGATGTTTGGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTAGCAAGAATTCCAACTaGAATATTAGACTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PKVDVWHVSLHQPNLGQPSKNSN*NIRLRG
Trigger: GCCTCTAAGTCTAATATTGCAGTTGGAATTCTTGCT...AGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp AGTGCTCCTATTACACATTCAGTCTTAAAACCCCATGTACCAGGAGGGCACGAGAAGTTTGCTTTCATTTaGGCTAAGACCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SAPITHSVLKPHVPGGHEKFAFI*AKTIFS
Trigger: AGAGAAGATGGTCTTAGCCCAAATGAAAGCAAACTT...CTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACCCTAGTCTTCTCTCATaGCCTTTCATCTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNPSLLS*PFIFPE
Trigger: TTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGG...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTAGACGCTGGAACCGATaGTGGCTTCGCATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFRRWNR*WLRMFL
Trigger: CAGGAACATGCGAAGCCACCATCGGTTCCAGCGTCT...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCTAGAGTCAAGACTCTaGGTGGGCAGCTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLLESRL*VGSSSI
Trigger: TATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATATTTTAACTATGCTATaGTCCCAAAGGTGGATGTTT +
Preference number: 4 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADILTML*SQRWMF
Trigger: AAACATCCACCTTTGGGACCATAGCATAGTTAAAAT...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCATTGTCAAGACCCCCATaGTGGGAATGTCGTCATGGA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSLSRPP*WECRHG
Trigger: TCCATGACGACATTCCCACCATGGGGGTCTTGACAA...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR TCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTAAGGATGCTGCCATTTTaGGTGCTGCATATGATGAAC +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLRMLPF*VLHMMN
Trigger: GTTCATCATATGCAGCACTCAAAATGGCAGCATCCT...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGCCAACTTTAAAATACTaGCAGGTATTCAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGPTLKY*QVFRGF
Trigger: GAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGG...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCGGAGACTTGTCAAAATaGTTGACTCCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIGDLSK*LTPTFP
Trigger: GGGGAAGGTGGGAGTCAATCATTTTGACAAGTCTCC...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS-3UTR GCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAAGGTCCGAAGGATGCTaGCATTTTGAGTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSRSEGC*HFECCI
Trigger: TATGCAGCACTCAAAATGGCAGCATCCTTCGGACCT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAAAGAACATGAAATGCTaGTCCAAGCAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSKNMKC*SKQDPG
Trigger: TCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTTTGTGTGGAGCTGCTaGAGCAATCTCTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIFVWSC*SNLCLC
Trigger: GCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAAA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCCTAGTCTTCTCTCATaGCCTTTCATCTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLPSLLS*PFIFPE
Trigger: TTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTACTAACACTCAAATTTaGGGTTCAGCAAATGAAACT +
Preference number: 4 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQITNTQI*GSANET
Trigger: AGTTTCATTTGCTGAACCCCAAATTTGAGTGTTAGT...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCATCTGGGTCTTCTATATaGGCAATGACACTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSSGSSI*AMTLLR
Trigger: TCTCAGGAGTGTCATTGCTCATATAGAAGACCCAGA...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTTCCTGTCAACCCACTaGGTCAGACTGTATCTTTGC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIFLSTH*VRLYLC
Trigger: GCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAAGCAATCTCTGCCTTTaGCACGAGACCAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSSNLCL*HETKWK
Trigger: TTTCCATTTGGTCTCGTGGCAAAGGCAGAGATTGCT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTTGCTGGAGCAATCTCTaGCTTTGCCACGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFCWSNL*LCHETK
Trigger: TTTGGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCA...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTACGAGTCTTAGATTTTTaGCTAGGCAAAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLRVLDF*LGKILS
Trigger: GGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCG...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGTGCCACGAGACCAAATaGAAAAAGGTTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLCHETK*KKVSVP
Trigger: AGGAACTGAAACCTTTTTCCATTTGGTCTCGTGGCA...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCGGAATCCCAAGAAAATaGGGCACCGTCTTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIGIPRK*GTVFRQ
Trigger: TTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCC...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTATTAGGAGTCTCTGAATaGTCTGAGATCCGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLLGVSE*SEIREN
Trigger: ATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAA...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGACAGTCTGTCAACTTTaGTTAGAATACCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: TGYKNTATRILKSRVVTGTVCQL*LEYQTL
Trigger: TAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCGTCCGTTTCTAAAGTaGGGTAGGATGTTTAGAATG +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLRPFLK*GRMFRM
Trigger: CATTCTAAACATCCTACCCCACTTTAGAAACGGACG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTTGAAAGTTATTGTTTaGAGAAGAGAGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYILKVIV*RRELGP
Trigger: GGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAACAGCAAAAGAACATaGAATGCTGCTCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYINSKRT*NAAPSR
Trigger: CCTGCTTGGAGCAGCATTTCATGTTCTTTTGCTGTT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTTATTGTTGGCTTAAATaGCCAAGCGTTCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFYCWLK*PSVPHV
Trigger: GACGTGGGGAACGCTTGGTCATTTAAGCCAACAATA...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGTTCAACTACTGCCTTTaGATAGAACTTCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLFNYCL*IELLLC
Trigger: GCAAAGGAGAAGTTCTATTCAAAGGCAGTAGTTGAA...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTCTTCCCCAGAAGACTaGTCATATGATGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYISSPED*SYDGSS
Trigger: AGATGACCCATCATATGAGCAGTCTTCTGGGGAAGA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAATAGGATTCTTCTCCTaGTCCATCCTACTTATAATG +
Preference number: 4 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRIGFFS*SILLIM
Trigger: CATTATAAGTAGGATGGAGCAGGAGAAGAATCCTAT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGCAGGTAATGCTTTTGTaGATAGGCTGTCACAACTAT +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLQVMLL*IGCHNY
Trigger: ATAGTTGTGACAGCCTATGCACAAAAGCATTACCTG...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR GCA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGATAGGATTCTTCTCCTaGTCCATCCTACTTATAATG +
Preference number: 4 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLIGFFS*SILLIM
Trigger: CATTATAAGTAGGATGGAGCAGGAGAAGAATCCTAT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCCGTCCGTTTCTAAAGTaGGGTAGGATGTTTAGAATG +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIRPFLK*GRMFRM
Trigger: CATTCTAAACATCCTACCCCACTTTAGAAACGGACG...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAGTGGGAATGTCGTCATaGATGAAGAAAGCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSVGMSS*MKKAVK
Trigger: TTTAACTGCTTTCTTCATCCATGACGACATTCCCAC...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR GCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCCAGGTAATGCTTTTGTaGATAGGCTGTCACAACTAT +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIQVMLL*IGCHNY
Trigger: ATAGTTGTGACAGCCTATGCACAAAAGCATTACCTG...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR TCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCCCAACTTTAAAATACTaGCAGGTATTCAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIPTLKY*QVFRGF
Trigger: GAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGG...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTAAGTTTGCTTTCATTTaGGCTAAGACCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFKFAFI*AKTIFS
Trigger: AGAGAAGATGGTCTTAGCCCAAATGAAAGCAAACTT...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CCA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCACAGTCTGTCAACTTTaGTTAGAATACCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYITVCQL*LEYQTL
Trigger: TAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS CCA 90 bp TGGAGTCCCTCAGGAGCTAGAACGCGCCCTTCTCGCAGCAGGGCGTaGGCCTCCCAATCCCTCCAAGGGGCGGACGGCGTGCGCAACCCC +
Preference number: 5 (lower is better)
Translates to: WSPSGARTRPSRSRA*ASQSLQGADGVRNP
Trigger: GGGGTTGCGCACGCCGTCCGCCCCTTGGAGGGATTGGGAGGCCCACGCCCTGCTGCGAGAAGGGCGCGTTCTAGCTCCTGAGGGACTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474103.1
CDS CCA 90 bp CCACCTTCCTCAGGAGCTAGAACGCGCCCTTCTCGCAGCAGGGCGTaGGCCTCCCAATCCCTCCAAGGGGCGGACGGCGTGCGCAACCCC +
Preference number: 5 (lower is better)
Translates to: PPSSGARTRPSRSRA*ASQSLQGADGVRNP
Trigger: GGGGTTGCGCACGCCGTCCGCCCCTTGGAGGGATTGGGAGGCCCACGCCCTGCTGCGAGAAGGGCGCGTTCTAGCTCCTGAGGAAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482212.1
CDS CCA 90 bp GAGTCAGCCGGGCCAACACCAGGGGGAGGGCAAACCAGCAGTGATTaGCAGGAAACCGTCCCGCCTCTAGGAGGGTTGTGCCCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: ESAGPTPGGGQTSSD*QETVPPLGGLCPAQ
Trigger: CTGAGCGGGGCACAACCCTCCTAGAGGCGGGACGGTTTCCTGCCAATCACTGCTGGTTTGCCCTCCCCCTGGTGTTGGCCCGGCTGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS CCA 90 bp ATCGTGAACATAAATGTGGCACACTCCGGAAGCCGGGCCAAAGCCTaGGCGAACGACTGCGCCTCACTCCGCCCCCTGCGCCATTTTATC +
Preference number: 5 (lower is better)
Translates to: IVNINVAHSGSRAKA*ANDCASLRPLRHFI
Trigger: GATAAAATGGCGCAGGGGGCGGAGTGAGGCGCAGTCGTTCGCCCAGGCTTTGGCCCGGCTTCCGGAGTGTGCCACATTTATGTTCACGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529027.5
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATCCGCCTCTAGGAGGGTaGTGCCCCGCTCAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADPPLGG*CPAQAP
Trigger: AGGCGCCTGAGCGGGGCACAACCCTCCTAGAGGCGG...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS TCA 90 bp GCGGGCGTAGTTTCGCGTGGTGAGGTCCGAAGGATGCTGCCATTTTaGGTGCTGCATATGATGAACTTGATCCATCAAGGCACAAAGCTC +
Preference number: 5 (lower is better)
Translates to: AGVVSRGEVRRMLPF*VLHMMNLIHQGTKL
Trigger: GAGCTTTGTGCCTTGATGGATCAAGTTCATCATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAACTACGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373475.10
ENST00000373476.5
ENST00000475486.1
ENST00000524535.5
ENST00000525203.5
ENST00000527692.1
CDS-3UTR CAA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCTCCCCCGAGATACCTaGGTTAGTGTCCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQILPRDT*VSVLWV
Trigger: GACCCAGAGGACACTAACCAAGGTATCTCGGGGGAG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATCGTGAGCACATCATTTaGTGTGGAGCTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADREHII*CGAAGA
Trigger: TGCTCCAGCAGCTCCACACAAAATGATGTGCTCACG...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS TCA 90 bp TATGAGCTGGTCCATGACCACTTGATGTACTTAGCTGAGGTAGTTTaGAGAGGTCAGGAGTCTCAGCTACTGGTCCCAGGCTGTACGATG +
Preference number: 5 (lower is better)
Translates to: YELVHDHLMYLAEVV*RGQESQLLVPGCTM
Trigger: CATCGTACAGCCTGGGACCAGTAGCTGAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000482212.1
ENST00000530710.5
ENST00000531123.5
ENST00000531256.1
CDS TCA 90 bp GAAACAGGATTCAACCCAGGAGGGCAGCAGAGGAAAATCCTGGGATaGCAGCTCTGTTGCAGGGCTAAAGAACAAGCAGTGCAAATTGGA +
Preference number: 5 (lower is better)
Translates to: ETGFNPGGQQRKILG*QLCCRAKEQAVQIG
Trigger: TCCAATTTGCACTGCTTGTTCTTTAGCCCTGCAACAGAGCTGTCATCCCAGGATTTTCCTCTGCTGCCCTCCTGGGTTGAATCCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356689.7
CDS CCA 90 bp TCCAAGAAACAGGATTCAACCCAGGAGGGCAGCAGAGGAAAATCCTaGGATGACAGCTCTGTTGCAGGGCTAAAGAACAAGCAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SKKQDSTQEGSRGKS*DDSSVAGLKNKQCK
Trigger: TTTGCACTGCTTGTTCTTTAGCCCTGCAACAGAGCTGTCATCCCAGGATTTTCCTCTGCTGCCCTCCTGGGTTGAATCCTGTTTCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356689.7
CDS TCA 90 bp CCCCGAGATACCTGTGATACAGAGGGATCAGTGGTTAGGAACAGCTaGGTGAACTACGTCAGCCAACGTCAAAGTATGTGTTTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PRDTCDTEGSVVRNS*VNYVSQRQSMCFQG
Trigger: TCCCTGAAAACACATACTTTGACGTTGGCTGACGTAGTTCACTCAGCTGTTCCTAACCACTGATCCCTCTGTATCACAGGTATCTCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475486.1
CDS GCA 90 bp ACTGTCTTCCATACTGTGTGGAGCTGCTGGAGCAATCTCTGCCTTTaGCACGAGACCAAATGGAAAAAGGTTTCAGTTCCTGCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: TVFHTVWSCWSNLCL*HETKWKKVSVPASC
Trigger: ACAGCTAGCAGGAACTGAAACCTTTTTCCATTTGGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAGTATGGAAGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526230.1
CDS CCA 90 bp CAAGGAGTCATCCAATCCATCCTCATCCAAGGAATCCCAAGAAAATaGGGCACCGTCTTTAGGCAAGAGAGAGGTACCAGAAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: QGVIQSILIQGIPRK*GTVFRQERGTRRLF
Trigger: GAACAGTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGGATGACTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000482212.1
ENST00000526230.1
ENST00000529027.5
ENST00000530710.5
ENST00000531123.5
ENST00000531256.1
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATCTGGTCCATGACCACTaGATGTACTTAGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADLVHDH*MYLAEV
Trigger: TACCTCAGCTAAGTACATCAAGTGGTCATGGACCAG...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS TCA 90 bp ATGATTGACTCCCACCTTCCTGATAGGGTTGTGGCAAGAATTAAATaGGATCGTGAACATAAATGTGGCACACTCCGGAAGCCGGGCCAA +
Preference number: 5 (lower is better)
Translates to: MIDSHLPDRVVARIK*DREHKCGTLRKPGQ
Trigger: TTGGCCCGGCTTCCGGAGTGTGCCACATTTATGTTCACGATCTCATTTAATTCTTGCCACAACCCTATCAGGAAGGTGGGAGTCAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529027.5
CDS-3UTR CAA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTCTGGTCCATGACCACTaGATGTACTTAGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQILVHDH*MYLAEV
Trigger: TACCTCAGCTAAGTACATCAAGTGGTCATGGACCAG...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GCACTAGCCTGCCCTAGAGTCAAGACTCTGGGTGGGCAGCTCTTCAATAAAGACATCTCATTTCACAACTaGACTTGTGTGAACCACCAT +
Preference number: 5 (lower is better)
Translates to: ALACPRVKTLGGQLFNKDISFHN*TCVNHH
Trigger: ATGGTGGTTCACACAAGTCAAGTTGTGAAATGAGAT...GTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATAGTTTTTCAGTATCTTaGGACGAATCAGTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADSFSVS*DESVSS
Trigger: GGACGAGACTGATTCGTCCAAAGATACTGAAAAACT...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCACTCCCCCGAGATACCTaGGTTAGTGTCCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSLPRDT*VSVLWV
Trigger: GACCCAGAGGACACTAACCAAGGTATCTCGGGGGAG...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGTGTCACTCATTTGATTaGGCAAAGGCAGTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: LRYQKVDFASAERWVFCLCHSFD*AKAVLL
Trigger: TAGGAGCACTGCCTTTGCCAAATCAAATGAGTGACA...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS TCA 90 bp GAGATACCTGTGATACAGAGGGATCAGTGGTTAGGAACAGCTGAGTaGACTACGTCAGCCAACGTCAAAGTATGTGTTTTCAGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: EIPVIQRDQWLGTAE*TTSANVKVCVFRER
Trigger: TCTTTCCCTGAAAACACATACTTTGACGTTGGCTGACGTAGTTCACTCAGCTGTTCCTAACCACTGATCCCTCTGTATCACAGGTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475486.1
CDS CCA 90 bp GAACCACCATTTCTGCAGGATAACTCCATATTAGGAGTCTCTGAATaGTCTGAGATCCGAGAGAATACAGACGTAGGGTTCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: EPPFLQDNSILGVSE*SEIRENTDVGFSLS
Trigger: TGACAGTGAGAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATGGTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACTTCCAGGCAGAGTTATaGGGGCTGATCCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNFQAEL*GLIPSD
Trigger: ATCTGAAGGGATCAGCCCCAATAACTCTGCCTGGAA...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp TTGAGGTACCAGAAAGTAGACTTTGCCTCTGCAGAGAGGTGGGTCTTTTGCTTGGAACATCCTGTTTGTTaGATGAGGTGGAAACAACCA +
Preference number: 5 (lower is better)
Translates to: LRYQKVDFASAERWVFCLEHPVC*MRWKQP
Trigger: TGGTTGTTTCCACCTCATCAAACAAACAGGATGTTC...CAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTTCTGCTGTTCTAGATTaGACTGTGAAAACGTCGGAA +
Preference number: 5 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQISAVLD*TVKTSE
Trigger: TTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGA...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CCAAAGGTGGATGTTTGGCATGTCTCACTCCATCAACCTAATTTAGGGCAGCCTCTGCATATGATGAACTaGATCCATCAAGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: PKVDVWHVSLHQPNLGQPLHMMN*IHQGTK
Trigger: CTTTGTGCCTTGATGGATCAAGTTCATCATATGCAG...AGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGATACCAACCGAACGCTaGCTTAAACACAGACACACA +
Preference number: 5 (lower is better)
Translates to: TGYKNTATRILKSRVVTGIPTER*LKHRHT
Trigger: TGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTAT...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTAAGGTGGGTCTTTTGCTaGAACCTGGGTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLRWVFC*NLGVLA
Trigger: AGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCT...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGGATCAGGTAATGCTTTaGTGCATAGGCTGTCACAAC +
Preference number: 5 (lower is better)
Translates to: TGYKNTATRILKSRVVTGDQVML*CIGCHN
Trigger: GTTGTGACAGCCTATGCACAAAAGCATTACCTGATC...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATAATAGAACTTCTCCTTaGCATTTTGGCCCCAGAATT +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADNRTSP*HFGPRI
Trigger: AATTCTGGGGCCAAAATGCAAAGGAGAAGTTCTATT...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATGATTCAGTACAAAGTTaGCTTTCATTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADDSVQS*LSFGLR
Trigger: TCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATC...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GAACATGAAATGCTGCTCCAAGCAGGACCCTGGATAGGGACCTTCATTGCTGATTTAAGAACATCCTGTTaGTTTGATGAGGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: EHEMLLQAGPWIGTFIADLRTSC*FDEVET
Trigger: TGTTTCCACCTCATCAAACAAACAGGATGTTCTTAA...ATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GTGCCTTTCCACACTCTCCCACAGAATGGAGGCTCCCTAACTAACACTCAAATTATCTTCCCAGAATCCTaGTTAAGAACATCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: VPFHTLPQNGGSLTNTQIIFPES*LRTSCL
Trigger: CAAACAGGATGTTCTTAACAAGGATTCTGGGAAGAT...AATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGTCTGCTGTTCTAGATTaGACTGTGAAAACGTCGGAA +
Preference number: 5 (lower is better)
Translates to: TGYKNTATRILKSRVVTGSAVLD*TVKTSE
Trigger: TTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGA...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCCAGTCCAACAGATTTAATTAAGCTGCTAAAGCTTTGGAAAAACAGTCAGACTGTATCTTaGCAGATGTTTCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: LSSPSPTDLIKLLKLWKNSQTVS*QMFLSA
Trigger: CGCCGACAGAAACATCTGCAAAGATACAGTCTGACT...GTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp AGTGCTCCTATTACACATTCAGTCTTAAAACCCCATGTACCAGGAGGGCACGAGCTTCTCCTTTGCATTTaGGCCCCAGAATTTAAAACA +
Preference number: 5 (lower is better)
Translates to: SAPITHSVLKPHVPGGHELLLCI*APEFKT
Trigger: TGTTTTAAATTCTGGGGCCAAAATGCAAAGGAGAAG...CTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS CCA 90 bp CTTCTCTCATCTCTTCTCCAAGGGAAGAGAGTTTTTCAGTATCTTTaGACGAATCAGTCTCGTCCTTATCAAGCAGAGCATCACAAACTG +
Preference number: 5 (lower is better)
Translates to: LLSSLLQGKRVFQYL*TNQSRPYQAEHHKL
Trigger: CAGTTTGTGATGCTCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS-3UTR CAA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCCGTGAGCACATCATTTaGTGTGGAGCTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIREHII*CGAAGA
Trigger: TGCTCCAGCAGCTCCACACAAAATGATGTGCTCACG...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGGTTACAAGAATACTGCCACTAGAATCCTAAAGAGCAGAGTGGTCACTGGGATTTCACAACTTGACTaGTGTGAACCACCATTTCTG +
Preference number: 5 (lower is better)
Translates to: TGYKNTATRILKSRVVTGISQLD*CEPPFL
Trigger: CAGAAATGGTGGTTCACACAAGTCAAGTTGTGAAAT...CCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAAGAACAGGAATGACTTaGCCTAGTCTTCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRRTGMT*PSLLSW
Trigger: CCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAAGAGAGGTGGGTCTTTaGCTTGAACCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSREVGL*LEPGCS
Trigger: AGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS TCA 90 bp CCAACAATTTGTACTTTCTTAAGACTATCATCTACTTTAGTAGGATaGATACTGGCATGGGAGTCCAAAGACCTGGGGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PTICTFLRLSSTLVG*ILAWESKDLGCSPG
Trigger: ACCAGGACTACACCCCAGGTCTTTGGACTCCCATGCCAGTATTCATCCTACTAAAGTAGATGATAGTCTTAAGAAAGTACAAATTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530552.1
CDS-3UTR CAA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCTTCCAGGCAGAGTTATaGGGGCTGATCCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIFQAEL*GLIPSD
Trigger: ATCTGAAGGGATCAGCCCCAATAACTCTGCCTGGAA...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CAACTCCTAAGACATCCATTAAGACAGACGCACAGTCTGTCAACTTTGGTTAGAAAGGATGCTGCCATTTaGAGTGCTGCATATGATGAA +
Preference number: 5 (lower is better)
Translates to: QLLRHPLRQTHSLSTLVRKDAAI*SAAYDE
Trigger: TTCATCATATGCAGCACTCAAAATGGCAGCATCCTT...TCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAGAGAGGTGGGTCTTTaGCTTGAACCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYIREVGL*LEPGCS
Trigger: AGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGTATTTTTACTCTGCTTaGTCAAGACCCCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLYFYSA*SRPPWW
Trigger: CCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATA...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGAAGGATGCTGCCATTTaGAGTGCTGCATATGATGAA +
Preference number: 5 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLKDAAI*SAAYDE
Trigger: TTCATCATATGCAGCACTCAAAATGGCAGCATCCTT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACCTTAAGATCAGGTAATGCTTTTGTGCATAGGCTGTCACAACTATATTACATCAGTCAGACTGTATCTTaGCAGATGTTTCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: TLRSGNAFVHRLSQLYYISQTVS*QMFLSA
Trigger: CGCCGACAGAAACATCTGCAAAGATACAGTCTGACT...GATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp AAAACTATACCAACCGAACGCTTGCTTAAACACAGACACACACACACAAAATCAATACCAACCGAACGCTaGCTTAAACACAGACACACA +
Preference number: 5 (lower is better)
Translates to: KTIPTERLLKHRHTHTKSIPTER*LKHRHT
Trigger: TGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTAT...TGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTCCCAAAGGTGGATGTTaGGCATGTCTCACTCCATCA +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFPKGGC*ACLTPS
Trigger: TGATGGAGTGAGACATGCCAAACATCCACCTTTGGG...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373475.10
CDS-3UTR CAA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGATTTCACAACTTGACTaGTGTGAACCACCATTTCTG +
Preference number: 5 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLISQLD*CEPPFL
Trigger: CAGAAATGGTGGTTCACACAAGTCAAGTTGTGAAAT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp CTAAAGTGGGGTAGGATGTTTAGAATGCATTACTCACACAGAAAGATGGGATTGATCTCATTTCACAACTaGACTTGTGTGAACCACCAT +
Preference number: 5 (lower is better)
Translates to: LKWGRMFRMHYSHRKMGLISFHN*TCVNHH
Trigger: ATGGTGGTTCACACAAGTCAAGTTGTGAAATGAGAT...CAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp GTGCATAGGCTGTCACAACTATATTACATCCACGTTAGCATCCATGTGAAACTATTAAGAACATCCTGTTaGTTTGATGAGGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: VHRLSQLYYIHVSIHVKLLRTSC*FDEVET
Trigger: TGTTTCCACCTCATCAAACAAACAGGATGTTCTTAA...TAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTAGAACAGGAATGACTTaGCCTAGTCTTCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFRTGMT*PSLLSW
Trigger: CCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTGATCAGGTAATGCTTTaGTGCATAGGCTGTCACAAC +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFDQVML*CIGCHN
Trigger: GTTGTGACAGCCTATGCACAAAAGCATTACCTGATC...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTGAACATCCTGTTTGTTaGATGAGGTGGAAACAACCA +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFEHPVC*MRWKQP
Trigger: TGGTTGTTTCCACCTCATCAAACAAACAGGATGTTC...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTCTGCATATGATGAACTaGATCCATCAAGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFLHMMN*IHQGTK
Trigger: CTTTGTGCCTTGATGGATCAAGTTCATCATATGCAG...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTATCTTCCCAGAATCCTaGTTAAGAACATCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFIFPES*LRTSCL
Trigger: CAAACAGGATGTTCTTAACAAGGATTCTGGGAAGAT...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS-3UTR CAA 90 bp ACAGTCTGTCAACTTTGGTTAGAATACCAAACCTTAAGATCAGGTAATGCTTTTGATTCAGTACAAAGTTaGCTTTCATTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: TVCQLWLEYQTLRSGNAFDSVQS*LSFGLR
Trigger: TCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATC...AAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS CAA 90 bp CAAACCAGCAGTGATTGGCAGGAAACCGTCCCGCCTCTAGGAGGGTaGTGCCCCGCTCAGGCGCCTCAGCCCCGCCCTCCGCACCGCCCA +
Preference number: 6 (lower is better)
Translates to: QTSSDWQETVPPLGG*CPAQAPQPRPPHRP
Trigger: TGGGCGGTGCGGAGGGCGGGGCTGAGGCGCCTGAGCGGGGCACAACCCTCCTAGAGGCGGGACGGTTTCCTGCCAATCACTGCTGGTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS CCA 72 bp TCAGGAGCTAGAACGCGCCCTTCTCGCAGCAGGGCGTaGGCCTCCCAATCCCTCCAAGGGGCGGACGGCGTG +
Preference number: 6 (lower is better)
Translates to: SGARTRPSRSRA*ASQSLQGADGV
Trigger: CACGCCGTCCGCCCCTTGGAGGGATTGGGAGGCCCACGCCCTGCTGCGAGAAGGGCGCGTTCTAGCTCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474103.1
ENST00000482212.1
CDS CAA 72 bp AGTGATTGGCAGGAAACCGTCCCGCCTCTAGGAGGGTaGTGCCCCGCTCAGGCGCCTCAGCCCCGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: SDWQETVPPLGG*CPAQAPQPRPP
Trigger: CGGAGGGCGGGGCTGAGGCGCCTGAGCGGGGCACAACCCTCCTAGAGGCGGGACGGTTTCCTGCCAATCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS GCA 72 bp TCCTCCGGAAGCCGGGCCAAAGCCTGGGCGAACGACTaGGCCTCACTCCGCCCCCTGCGCCATTTTATCGCC +
Preference number: 6 (lower is better)
Translates to: SSGSRAKAWAND*ASLRPLRHFIA
Trigger: GGCGATAAAATGGCGCAGGGGGCGGAGTGAGGCGCAGTCGTTCGCCCAGGCTTTGGCCCGGCTTCCGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356689.7
ENST00000531123.5
CDS GCA 72 bp CACTCCGGAAGCCGGGCCAAAGCCTGGGCGAACGACTaGGCCTCACTCCGCCCCCTGCGCCATTTTATCGCC +
Preference number: 6 (lower is better)
Translates to: HSGSRAKAWAND*ASLRPLRHFIA
Trigger: GGCGATAAAATGGCGCAGGGGGCGGAGTGAGGCGCAGTCGTTCGCCCAGGCTTTGGCCCGGCTTCCGGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529027.5
CDS CCA 72 bp ATAAATGTGGCACACTCCGGAAGCCGGGCCAAAGCCTaGGCGAACGACTGCGCCTCACTCCGCCCCCTGCGC +
Preference number: 6 (lower is better)
Translates to: INVAHSGSRAKA*ANDCASLRPLR
Trigger: GCGCAGGGGGCGGAGTGAGGCGCAGTCGTTCGCCCAGGCTTTGGCCCGGCTTCCGGAGTGTGCCACATTTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529027.5
CDS CCA 72 bp GGGCCAACACCAGGGGGAGGGCAAACCAGCAGTGATTaGCAGGAAACCGTCCCGCCTCTAGGAGGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: GPTPGGGQTSSD*QETVPPLGGLC
Trigger: GCACAACCCTCCTAGAGGCGGGACGGTTTCCTGCCAATCACTGCTGGTTTGCCCTCCCCCTGGTGTTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373476.5
CDS TCA 72 bp GCTAGCTGTTCCTTTCAGGAGACTTGTCAAAATGATTaGCTCCCACCTTCCTCCGGAAGCCGGGCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: ASCSFQETCQND*LPPSSGSRAKA
Trigger: GGCTTTGGCCCGGCTTCCGGAGGAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000526230.1
ENST00000531123.5
CDS TCA 72 bp GCTAGCTGTTCCTTTCAGGAGACTTGTCAAAATGATTaGCTCCCACCTTCCTCAGGAGCTAGAACGCGCCCT +
Preference number: 6 (lower is better)
Translates to: ASCSFQETCQND*LPPSSGARTRP
Trigger: AGGGCGCGTTCTAGCTCCTGAGGAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482212.1
CDS CAA 72 bp GACTCCCACCTTCCTCTTGCGTCCAGTTGTCTTGTGTaGGAGCCAAACTTTGAATCCAGGACTCCCATTCCA +
Preference number: 6 (lower is better)
Translates to: DSHLPLASSCLV*EPNFESRTPIP
Trigger: TGGAATGGGAGTCCTGGATTCAAAGTTTGGCTCCAACACAAGACAACTGGACGCAAGAGGAAGGTGGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530710.5
CDS TCA 72 bp GTTTCGCGTGGTGAGGTCCGAAGGATGCTGCCATTTTaGGTGCTGCATATGATGAACTTGATCCATCAAGGC +
Preference number: 6 (lower is better)
Translates to: VSRGEVRRMLPF*VLHMMNLIHQG
Trigger: GCCTTGATGGATCAAGTTCATCATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373475.10
ENST00000373476.5
ENST00000475486.1
ENST00000524535.5
ENST00000525203.5
ENST00000527692.1
CDS CAA 72 bp GAAGAAGAGAGCTGGGGCCCATTCCAGGCAGAGTTATaGGGGCTGATCCCTTCAGATTCAGTACAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: EEESWGPFQAEL*GLIPSDSVQSL
Trigger: CAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGGAATGGGCCCCAGCTCTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CCA 72 bp ATCCAATCCATCCTCATCCAAGGAATCCCAAGAAAATaGGGCACCGTCTTTAGGCAAGAGAGAGGTACCAGA +
Preference number: 6 (lower is better)
Translates to: IQSILIQGIPRK*GTVFRQERGTR
Trigger: TCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000482212.1
ENST00000526230.1
ENST00000529027.5
ENST00000530710.5
ENST00000531123.5
ENST00000531256.1
CDS CAA 90 bp GAGATACCTCTAGGTCAACAAAACTGCGATGATCTAGTAGAAATCTaGACTGATTTTCCTGGAGGCGGAGGTTGCGGTGAGCTGAGATCG +
Preference number: 6 (lower is better)
Translates to: EIPLGQQNCDDLVEI*TDFPGGGGCGELRS
Trigger: CGATCTCAGCTCACCGCAACCTCCGCCTCCAGGAAAATCAGTCAAGATTTCTACTAGATCATCGCAGTTTTGTTGACCTAGAGGTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525203.5
CDS TCA 72 bp ATGCCCACCATCATCTTCCCCAGAAGACTGCTCATATaGTGGGTCATCTTCCTTCAACAGTGCATCAATCTC +
Preference number: 6 (lower is better)
Translates to: MPTIIFPRRLLI*WVIFLQQCINL
Trigger: GAGATTGATGCACTGTTGAAGGAAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000482212.1
ENST00000526230.1
ENST00000530710.5
ENST00000531123.5
ENST00000531256.1
CDS TCA 72 bp ACCTGTGATACAGAGGGATCAGTGGTTAGGAACAGCTaGGTGAACTACGTCAGCCAACGTCAAAGTATGTGT +
Preference number: 6 (lower is better)
Translates to: TCDTEGSVVRNS*VNYVSQRQSMC
Trigger: ACACATACTTTGACGTTGGCTGACGTAGTTCACTCAGCTGTTCCTAACCACTGATCCCTCTGTATCACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475486.1
CDS TCA 72 bp GCTAGCTGTTCCTTTCAGGAGACTTGTCAAAATGATTaGCTCCCACCTTCCTCTTGCGTCCAGTTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: ASCSFQETCQND*LPPSSCVQLSC
Trigger: ACAAGACAACTGGACGCAAGAGGAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530710.5
CDS GCA 72 bp GCACATCATTTTGTGTGGAGCTGCTGGAGCAATCTCTaGCTTTGCCACGAGACCAAATGGAAAAAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: AHHFVWSCWSNL*LCHETKWKKVS
Trigger: TGAAACCTTTTTCCATTTGGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAAAATGATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000482212.1
ENST00000529027.5
ENST00000530552.1
ENST00000530710.5
ENST00000531123.5
CDS GCA 72 bp CCAGGATTCTCCTCCCACATGGACACAGAGAACAGATaGGCTAAGCTGCAGCAACAGGTTTCTTTTCAAAAA +
Preference number: 6 (lower is better)
Translates to: PGFSSHMDTENR*AKLQQQVSFQK
Trigger: TTTTTGAAAAGAAACCTGTTGCTGCAGCTTAGCGCATCTGTTCTCTGTGTCCATGTGGGAGGAGAATCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474103.1
ENST00000477248.1
CDS CCA 72 bp ACAAAGCTCCCCCGAGATACCTTGGTTAGTGTCCTCTaGGTCTTCTATATGAGCAATGACACTCCTGAGATA +
Preference number: 6 (lower is better)
Translates to: TKLPRDTLVSVL*VFYMSNDTPEI
Trigger: TATCTCAGGAGTGTCATTGCTCATATAGAAGACCCAGAGGACACTAACCAAGGTATCTCGGGGGAGCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373475.10
ENST00000373476.5
CDS TCA 72 bp GTGATACAGAGGGATCAGTGGTTAGGAACAGCTGAGTaGACTACGTCAGCCAACGTCAAAGTATGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: VIQRDQWLGTAE*TTSANVKVCVF
Trigger: GAAAACACATACTTTGACGTTGGCTGACGTAGTTCACTCAGCTGTTCCTAACCACTGATCCCTCTGTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475486.1
CDS TCA 72 bp TCCCACCTTCCTGATAGGGTTGTGGCAAGAATTAAATaGGATCGTGAACATAAATGTGGCACACTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: SHLPDRVVARIK*DREHKCGTLRK
Trigger: CTTCCGGAGTGTGCCACATTTATGTTCACGATCTCATTTAATTCTTGCCACAACCCTATCAGGAAGGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529027.5
CDS CAA 90 bp CAGGCAGAGTTATTGGGGCTGATCCCTTCAGATTCAGTACAAAGTTaGCTTTCATTTGGGCTAAGACCATCTTCTCTCATCTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: QAELLGLIPSDSVQS*LSFGLRPSSLISSP
Trigger: TGGAGAAGAGATGAGAGAAGATGGTCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 90 bp GTCGGAACATTAGTCCTGGTCTTAGTTTGTAGAACAGGAATGACTTaGCCTAGTCTTCTCTCATGGCCTTTCATCTTCCCAGAATCCTTG +
Preference number: 6 (lower is better)
Translates to: VGTLVLVLVCRTGMT*PSLLSWPFIFPESL
Trigger: CAAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGACCAGGACTAATGTTCCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 90 bp ACCTGGGGTGTAGTCCTGGTTGTATCACTAGCCAGCTCCAATAACTaGGGTATGCCACTTGACCATTTAGACTTGTTTCCTCATTTACAA +
Preference number: 6 (lower is better)
Translates to: TWGVVLVVSLASSNN*GMPLDHLDLFPHLQ
Trigger: TTGTAAATGAGGAAACAAGTCTAAATGGTCAAGTGGCATACCCAAGTTATTGGAGCTGGCTAGTGATACAACCAGGACTACACCCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530552.1
CDS CCA 72 bp TTTCTGCAGGATAACTCCATATTAGGAGTCTCTGAATaGTCTGAGATCCGAGAGAATACAGACGTAGGGTTC +
Preference number: 6 (lower is better)
Translates to: FLQDNSILGVSE*SEIRENTDVGF
Trigger: GAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CCA 72 bp TCCACTTCTAGGGATTCATCCTTGGTTAGTGTCCTCTaGGTCTTCTATATGAGCAATGACACTCCTGAGATA +
Preference number: 6 (lower is better)
Translates to: STSRDSSLVSVL*VFYMSNDTPEI
Trigger: TATCTCAGGAGTGTCATTGCTCATATAGAAGACCCAGAGGACACTAACCAAGGATGAATCCCTAGAAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356689.7
ENST00000531123.5
CDS CAA 72 bp GTAGTCCTGGTTGTATCACTAGCCAGCTCCAATAACTaGGGTATGCCACTTGACCATTTAGACTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: VVLVVSLASSNN*GMPLDHLDLFP
Trigger: AGGAAACAAGTCTAAATGGTCAAGTGGCATACCCAAGTTATTGGAGCTGGCTAGTGATACAACCAGGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530552.1
CDS CCA 72 bp TCTCTTCTCCAAGGGAAGAGAGTTTTTCAGTATCTTTaGACGAATCAGTCTCGTCCTTATCAAGCAGAGCAT +
Preference number: 6 (lower is better)
Translates to: SLLQGKRVFQYL*TNQSRPYQAEH
Trigger: ATGCTCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 72 bp ATCTCTTCTCCAAGGGAAGAGAGTTTTTCAGTATCTTaGGACGAATCAGTCTCGTCCTTATCAAGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: ISSPREESFSVS*DESVSSLSSRA
Trigger: TGCTCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 90 bp TCTTCTCTCATCTCTTCTCCAAGGGAAGAGAGTTTTTCAGTATCTTaGGACGAATCAGTCTCGTCCTTATCAAGCAGAGCATCACAAACT +
Preference number: 6 (lower is better)
Translates to: SSLISSPREESFSVS*DESVSSLSSRASQT
Trigger: AGTTTGTGATGCTCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS GCA 72 bp GAACTCTTGTGCACTGTTGGTAGGACTGCAAAATGGTaGAACTGCTATGAAAAACAGTATGAAGTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: ELLCTVGRTAKW*NCYEKQYEVPQ
Trigger: TTGAGGAACTTCATACTGTTTTTCATAGCAGTTGCACCATTTTGCAGTCCTACCAACAGTGCACAAGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356689.7
CDS CAA 72 bp GTGGAAACAACCAGAGATCTCATTTCACAACTTGACTaGTGTGAACCACCATTTCTGCAGGATAACTCCATA +
Preference number: 6 (lower is better)
Translates to: VETTRDLISQLD*CEPPFLQDNSI
Trigger: TATGGAGTTATCCTGCAGAAATGGTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 72 bp ATGAGGTGGAAACAACCAGAGATCTCATTTCACAACTaGACTTGTGTGAACCACCATTTCTGCAGGATAACT +
Preference number: 6 (lower is better)
Translates to: MRWKQPEISFHN*TCVNHHFCRIT
Trigger: AGTTATCCTGCAGAAATGGTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS CAA 90 bp TTTGATGAGGTGGAAACAACCAGAGATCTCATTTCACAACTTGACTaGTGTGAACCACCATTTCTGCAGGATAACTCCATATTAGGAGTC +
Preference number: 6 (lower is better)
Translates to: FDEVETTRDLISQLD*CEPPFLQDNSILGV
Trigger: GACTCCTAATATGGAGTTATCCTGCAGAAATGGTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356689.7
ENST00000373475.10
ENST00000373476.5
ENST00000531123.5
CDS TCA 72 bp TACAGGGAACTTTACTTGTCCCTAGGAATATGGCAGTaGACAAGACACTACCTCAATGAAGTTTATACAGGA +
Preference number: 6 (lower is better)
Translates to: YRELYLSLGIWQ*TRHYLNEVYTG
Trigger: TCCTGTATAAACTTCATTGAGGTAGTGTCTTGTTCACTGCCATATTCCTAGGGACAAGTAAAGTTCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475486.1
ENST00000527692.1
CDS CAA 72 bp GAGGGGGAACTGTTGTGTAGGTATAGAGTTTTAGATTaGCAAGATGAAGAGGTTCTGGAGATATGTTTCACA +
Preference number: 6 (lower is better)
Translates to: EGELLCRYRVLD*QDEEVLEICFT
Trigger: TGTGAAACATATCTCCAGAACCTCTTCATCTTGCAAATCTAAAACTCTATACCTACACAACAGTTCCCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356689.7
CDS TCA 72 bp AAGGAAATCCTGTCACATGCCACAATGGGTAAATCTTaGAGACATTATACTAAACGAAATAAGCCAGTCACA +
Preference number: 6 (lower is better)
Translates to: KEILSHATMGKS*RHYTKRNKPVT
Trigger: TGTGACTGGCTTATTTCGTTTAGTATAATGTCTTCAAGATTTACCCATTGTGGCATGTGACAGGATTTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356689.7