Pregenerated sensors for S100A9 (Homo sapiens)
Ensembl gene IDs: ENSG00000163220Ensembl transcript IDs: ENST00000368738.4
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGCTGTGGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTTGGCCGTGGCCACCATaGCTGTGGCCGTGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GCGRGHHDCGRGRGHCDLWPWPP*LWPWPW Trigger: CCACGGCCACGGCCACAGTCATGGTGGCCACGGCCA...AAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCCACAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTCCGAGGCCTGGCTTATaGTGGTGGCCAGGGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GCGRGHHDCGRGRGHCDLPRPGL*WWPGPS Trigger: CGAGGGCCCTGGCCACCACCATAAGCCAGGCCTCGG...AAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCCACAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTCAGGCCCCGGGGCCCTaGTTGGGTAGAGGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGWPGLLISGCGRGHHDCQAPGP*LGRGRV Trigger: CACCCTGCCTCTACCCAACCAGGGCCCCGGGGCCTG...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGTGGCCTGGCCTCCTaGTTAGTGGCTGTGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GCGRGHHDCGRGRGHCDLGGLAS*LVAVAV Trigger: CACGGCCACAGCCACTAATCAGGAGGCCAGGCCACC...AAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCCACAGCC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACCCCTCGTCACCCTCGTaGATCTTCTCGTGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRGHHDCGRGRGHCDLGHPSSPS*IFSWEA Trigger: GGCCTCCCACGAGAAGATGCACGAGGGTGACGAGGG...GTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTGCCCTCCCCGAGGCCTaGCTTATGGTGGTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGWPGLLISGCGRGHHDCALPEA*LMVVAR Trigger: CCTGGCCACCACCATAAGCCAGGCCTCGGGGAGGGC...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTTGTGGTCTTAGGGGGTaGCCTCCCCGAGGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGWPGLLISGCGRGHHDCCGLRG*PPRGLA Trigger: AGCCAGGCCTCGGGGAGGGCACCCCCTAAGACCACA...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTCCTGGCTTATGGTGGTaGCCAGGGCCCTCGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: GHHDCGRGRGHCDLGHCGPGLWW*PGPSSP Trigger: GGGTGACGAGGGCCCTGGCCACCACCATAAGCCAGG...ACCACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTTGGCCGTGGCCACTGTaGTCTTGGCCACTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GCGRGHHDCGRGRGHCDLWPWPL*SWPLWS Trigger: AGACCACAGTGGCCAAGATCACAGTGGCCACGGCCA...AAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCCACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTCGTGCATCTTCTCGTaGGAGGCCCAGGTTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRGHHDCGRGRGHCDLGHSCIFS*EAQVSL Trigger: GAGGCTAACCTGGGCCTCCCACGAGAAGATGCACGA...GTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACGCTCAGCTGCTTGTCTaGATTTGTGTCCAGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRGHHDCGRGRGHCDLGHAQLLV*ICVQVL Trigger: GAGGACCTGGACACAAATGCAGACAAGCAGCTGAGC...GTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGCTGGTTCAGGGTGTCTaGGTGCCCCAGCTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VATMTVAVAVATVILATVLVQGV*VPQLHR Trigger: TCTGTGAAGCTGGGGCACCCAGACACCCTGAACCAG...CACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR TCA 90 bp | GGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTTTCGCACCAGCTCTTTaGATTCCCCCTGGTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GHHDCGRGRGHCDLGHCGFAPAL*IPPGSG Trigger: CCCTGAACCAGGGGGAATTCAAAGAGCTGGTGCGAA...ACCACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GGCCGTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTCCTCGAAGCTCAGCTaGTTGTCTGCATTTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GRGHHDCGRGRGHCDLGHSSKLS*LSAFVS Trigger: GGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGA...GTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCACGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGTCTTTGAATTCCCCCTaGTTCAGGGTGTCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VATMTVAVAVATVILATVSLNSP*FRVSGC Trigger: GCACCCAGACACCCTGAACCAGGGGGAATTCAAAGA...CACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTTGCAAGTCATCGTCTTaGACTCTGTCAAAGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: GHHDCGRGRGHCDLGHCGCKSSS*TLSKPR Trigger: CCTCGGCTTTGACAGAGTGCAAGACGATGACTTGCA...ACCACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTCCAGCTGCGACATTTTaGAAGTCATCGTCTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: GHHDCGRGRGHCDLGHCGPAATF*KSSSCT Trigger: AGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGG...ACCACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR GCA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTATGTTGCGTTCCAGCTaGGACATTTTGCAAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: AGWPGLLISGCGRGHHDCMLRSS*DILQVI Trigger: GATGACTTGCAAAATGTCGCAGCTGGAACGCAACAT...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CCA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTTTCACAGAGTATTGGTaGAAGGTGTTGATGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: AGWPGLLISGCGRGHHDCFTEYW*KVLMMV Trigger: GACCATCATCAACACCTTCCACCAATACTCTGTGAA...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 90 bp | CGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTCTTAGGGGGTaGCCTCCCCGAGGCCTGGCTTATGGTGGTGGCCAGGGCCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: RGRGHCDLGHCGLRG*PPRGLAYGGGQGPR Trigger: ACGAGGGCCCTGGCCACCACCATAAGCCAGGCCTCGGGGAGGGCACCCCCTAAGACCACAGTGGCCAAGATCACAGTGGCCACGGCCACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 90 bp | CCGAGGCCTGGCTTATGGTGGTGGCCAGGGCCCTCGTCACCCTCGTaGATCTTCTCGTGGGAGGCCCAGGTTAGCCTCGCCATCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: PRPGLWWWPGPSSPS*IFSWEAQVSLAISM Trigger: CATGCTGATGGCGAGGCTAACCTGGGCCTCCCACGAGAAGATGCACGAGGGTGACGAGGGCCCTGGCCACCACCATAAGCCAGGCCTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CCA 90 bp | GTGATCTTGGCCACTGTGGTCTTAGGGGGTGCCCTCCCCGAGGCCTaGCTTATGGTGGTGGCCAGGGCCCTCGTCACCCTCGTGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: VILATVVLGGALPEA*LMVVARALVTLVHL Trigger: AAGATGCACGAGGGTGACGAGGGCCCTGGCCACCACCATAAGCCAGGCCTCGGGGAGGGCACCCCCTAAGACCACAGTGGCCAAGATCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGAGGAAGAGACTTTATTaGGCCCCAGCCCCTAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: VATMTVAVAVATVILATVRKRLY*APAPSP Trigger: GGGGCTAGGGGCTGGGGCCAAATAAAGTCTCTTCCT...CACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CCA 90 bp | TTATGGTGGTGGCCAGGGCCCTCGTCACCCTCGTGCATCTTCTCGTaGGAGGCCCAGGTTAGCCTCGCCATCAGCATGATGAACTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LWWWPGPSSPSCIFS*EAQVSLAISMMNSS Trigger: CGAGGAGTTCATCATGCTGATGGCGAGGCTAACCTGGGCCTCCCACGAGAAGATGCACGAGGGTGACGAGGGCCCTGGCCACCACCATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGGTTCGAAGCTCAGCTGCTaGTCTGCATTTGTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GHHDCGRGRGHCDLGHCGSKLSC*SAFVSR Trigger: CCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGA...ACCACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGTTGCAAGTCATCGTCTaGCACTCTGTCAAAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: VATMTVAVAVATVILATVLQVIV*HSVKAE Trigger: CTCGGCTTTGACAGAGTGCAAGACGATGACTTGCAA...CACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTGGCATGATGGTCTCTATGTaGCGTTCCAGCTGCGACATT | + |
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Preference number: 5 (lower is better) Translates to: GWPGLLISGCGRGHHDCGMMVSM*RSSCDI Trigger: AATGTCGCAGCTGGAACGCAACATAGAGACCATCAT...GCCACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GCAGGGTGGCCTGGCCTCCTGATTAGTGGCTGTGGCCGTGGCCACCATGACTGTCAGCTTCACAGAGTATaGGTGGAAGGTGTTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: AGWPGLLISGCGRGHHDCQLHRV*VEGVDD Trigger: ATCATCAACACCTTCCACCAATACTCTGTGAAGCTG...ACAGTCATGGTGGCCACGGCCACAGCCACTAATCAGGAGGCCAGGCCACCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS-3UTR CAA 90 bp | GTGGCCACCATGACTGTGGCCGTGGCCGTGGCCACTGTGATCTTGGCCACTGTGTATTGGTGGAAGGTGTaGATGATGGTCTCTATGTTG | + |
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Preference number: 5 (lower is better) Translates to: VATMTVAVAVATVILATVYWWKV*MMVSML Trigger: CAACATAGAGACCATCATCAACACCTTCCACCAATA...CACAGTGGCCAAGATCACAGTGGCCACGGCCACGGCCACAGTCATGGTGGCCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 90 bp | CAGGTTAGCCTCGCCATCAGCATGATGAACTCCTCGAAGCTCAGCTaGTTGTCTGCATTTGTGTCCAGGTCCTCCATGATGTGTTCTATG | + |
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Preference number: 5 (lower is better) Translates to: QVSLAISMMNSSKLS*LSAFVSRSSMMCSM Trigger: CATAGAACACATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTGATGGCGAGGCTAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 90 bp | CCTCGCCATCAGCATGATGAACTCCTCGAAGCTCAGCTGCTTGTCTaGATTTGTGTCCAGGTCCTCCATGATGTGTTCTATGACCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PRHQHDELLEAQLLV*ICVQVLHDVFYDLF Trigger: GAAAAGGTCATAGAACACATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTGATGGCGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 90 bp | TATTGGTGGAAGGTGTTGATGATGGTCTCTATGTTGCGTTCCAGCTaGGACATTTTGCAAGTCATCGTCTTGCACTCTGTCAAAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: YWWKVLMMVSMLRSS*DILQVIVLHSVKAE Trigger: CTCGGCTTTGACAGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTTCCACCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CCA 72 bp | GCCACTGTGGTCTTAGGGGGTGCCCTCCCCGAGGCCTaGCTTATGGTGGTGGCCAGGGCCCTCGTCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: ATVVLGGALPEA*LMVVARALVTL Trigger: GAGGGTGACGAGGGCCCTGGCCACCACCATAAGCCAGGCCTCGGGGAGGGCACCCCCTAAGACCACAGTGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 72 bp | GGCCACTGTGATCTTGGCCACTGTGGTCTTAGGGGGTaGCCTCCCCGAGGCCTGGCTTATGGTGGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GHCDLGHCGLRG*PPRGLAYGGGQ Trigger: CTGGCCACCACCATAAGCCAGGCCTCGGGGAGGGCACCCCCTAAGACCACAGTGGCCAAGATCACAGTGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CCA 72 bp | TGGCCAGGGCCCTCGTCACCCTCGTGCATCTTCTCGTaGGAGGCCCAGGTTAGCCTCGCCATCAGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: WPGPSSPSCIFS*EAQVSLAISMM Trigger: CATCATGCTGATGGCGAGGCTAACCTGGGCCTCCCACGAGAAGATGCACGAGGGTGACGAGGGCCCTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 72 bp | GGGTGCCCCAGCTTCACAGAGTATTGGTGGAAGGTGTaGATGATGGTCTCTATGTTGCGTTCCAGCTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: GCPSFTEYWWKV*MMVSMLRSSCD Trigger: GTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTTCCACCAATACTCTGTGAAGCTGGGGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 72 bp | CTCGCCATCAGCATGATGAACTCCTCGAAGCTCAGCTaGTTGTCTGCATTTGTGTCCAGGTCCTCCATGATG | + |
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Preference number: 6 (lower is better) Translates to: LAISMMNSSKLS*LSAFVSRSSMM Trigger: CATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTGATGGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 90 bp | GTTAGCCTCGCCATCAGCATGATGAACTCCTCGAAGCTCAGCTGCTaGTCTGCATTTGTGTCCAGGTCCTCCATGATGTGTTCTATGACC | + |
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Preference number: 6 (lower is better) Translates to: VSLAISMMNSSKLSC*SAFVSRSSMMCSMT Trigger: GGTCATAGAACACATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTGATGGCGAGGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 90 bp | AAGGTGTTGATGATGGTCTCTATGTTGCGTTCCAGCTGCGACATTTaGCAAGTCATCGTCTTGCACTCTGTCAAAGCCGAGGAGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: KVLMMVSMLRSSCDI*QVIVLHSVKAEEPH Trigger: GTGTGGCTCCTCGGCTTTGACAGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 72 bp | CAGCATGATGAACTCCTCGAAGCTCAGCTGCTTGTCTaGATTTGTGTCCAGGTCCTCCATGATGTGTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: QHDELLEAQLLV*ICVQVLHDVFY Trigger: ATAGAACACATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 72 bp | ATGATGGTCTCTATGTTGCGTTCCAGCTGCGACATTTaGCAAGTCATCGTCTTGCACTCTGTCAAAGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: MMVSMLRSSCDI*QVIVLHSVKAE Trigger: CTCGGCTTTGACAGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 90 bp | AGCTTCACAGAGTATTGGTGGAAGGTGTTGATGATGGTCTCTATGTaGCGTTCCAGCTGCGACATTTTGCAAGTCATCGTCTTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SFTEYWWKVLMMVSM*RSSCDILQVIVLHS Trigger: AGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTTCCACCAATACTCTGTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS GCA 72 bp | AAGGTGTTGATGATGGTCTCTATGTTGCGTTCCAGCTaGGACATTTTGCAAGTCATCGTCTTGCACTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KVLMMVSMLRSS*DILQVIVLHSV Trigger: GACAGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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| CDS CAA 72 bp | GAGTATTGGTGGAAGGTGTTGATGATGGTCTCTATGTaGCGTTCCAGCTGCGACATTTTGCAAGTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: EYWWKVLMMVSM*RSSCDILQVIV Trigger: GACGATGACTTGCAAAATGTCGCAGCTGGAACGCAACATAGAGACCATCATCAACACCTTCCACCAATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368738.4 |
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