Pregenerated sensors for S100A5 (Homo sapiens)
Ensembl gene IDs: ENSG00000196420Ensembl transcript IDs: ENST00000368717.2, ENST00000368718.5
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGTCAGCAGCAAAGGGTaGAGGGTGAGGGTGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PSTCDGNFISSHGRVHLGVSSKG*RVRVEG Trigger: GCCCTCCACCCTCACCCTCCACCCTTTGCTGCTGAC...TCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR TCA 90 bp | CACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGACACCGAGTACTCCTTaGAGTCGATCTCCTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HLRWKLYFLPWKGPSGRETPSTP*SRSPGR Trigger: GCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGT...CTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CCA 90 bp | CCCAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAAGGCCATGCACAGCATaGTCAGGAACACCGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: PSTCDGNFISSHGRVHLGRPCTA*SGTPST Trigger: AGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCT...TCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR GCA 90 bp | CACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGTACTCAGGGTCAGTTTaGTACCCTCTCTCCCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: HLRWKLYFLPWKGPSGREYSGSV*YPLSPN Trigger: ATTCGGGGAGAGAGGGTAGCAAACTGACCCTGAGTA...CTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR GCA 90 bp | AGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGTCGTTGTAGGCCATaGACAGCATGGTCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: STCDGNFISSHGRVHLGGSRCRP*TAWSGT Trigger: TGTTCCTGACCATGCTGTGCATGGCCTACAACGACT...CCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CCA 90 bp | CCCAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGATTGAAGTCGATCTCCTaGTCGCTGTTCTTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSTCDGNFISSHGRVHLGLKSIS*SLFLSR Trigger: CCTGGACAAGAACAGCGACCAGGAGATCGACTTCAA...TCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR TCA 90 bp | CCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGAGCTCCCCGAATATTTGTaGAACGTGGTCACCATAGTG | + |
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Preference number: 4 (lower is better) Translates to: PAMETLFPPMEGSIWEGELPEYL*NVVTIV Trigger: CACTATGGTGACCACGTTTCACAAATATTCGGGGAG...CTCTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR GCA 90 bp | CCCAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGATCAAGTCATCGATGCTaGTCTCCTTCATCTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PSTCDGNFISSHGRVHLGSSHRC*SPSSPQ Trigger: TTGGGGAGATGAAGGAGAGCAGCATCGATGACTTGA...TCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR GCA 90 bp | CCCAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGATCATCAAGTCATCGATaGTGCTCTCCTTCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PSTCDGNFISSHGRVHLGSSSHR*CSPSSP Trigger: GGGAGATGAAGGAGAGCAGCATCGATGACTTGATGA...TCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CCA 90 bp | CCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGAGTCCCAGCACCTGCGATaGAAACTTTATTTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PAMETLFPPMEGSIWEGESQHLR*KLYFLP Trigger: TGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGA...CTCTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CCA 90 bp | CAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAAACCAGGCTGTCCTaGAAAGAAAACCTCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QHLRWKLYFLPWKGPSGRETRLS*KENLRS Trigger: ACTTCTGAGGTTTTCTTTCCAGGACAGCCTGGTTTC...CCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGATTTACAAACAAGGGCTaGGGACACACTGAGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCDGNFISSHGRVHLGGRFTNKG*GHTEFP Trigger: TGGGAACTCAGTGTGTCCCCAGCCCTTGTTTGTAAA...TCTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR TCA 90 bp | CACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGTCAAAATCTGAAATCTaGTGGAACAATAAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLRWKLYFLPWKGPSGRESKSEI*WNNKPK Trigger: CTTCGGCTTATTGTTCCATCAGATTTCAGATTTTGA...CTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CAA 90 bp | CACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGCTACTCAGGGTCAGTTaGCTACCCTCTCTCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: HLRWKLYFLPWKGPSGRELLRVS*LPSLPE Trigger: TTCGGGGAGAGAGGGTAGCAAACTGACCCTGAGTAG...CTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS TCA 90 bp | CGTTGTAGGCCATGCACAGCATGGTCAGGAACACCGAGTACTCCTTaGAGTCGATCTCCTGGTCGCTGTTCTTGTCCAGGCTCTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: RCRPCTAWSGTPSTP*SRSPGRCSCPGSSS Trigger: TGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACAACG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368717.2 ENST00000368718.5 |
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| CDS-3UTR CAA 90 bp | CCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGAGTCCTGGTCGCTGTTCTaGTCCAGGCTCTTCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: PAMETLFPPMEGSIWEGESWSLF*SRLFIK Trigger: CTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGA...CTCTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CAA 90 bp | CAGCACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGGCAGCCCTGGTCACTaGTTGTCCTCTAGAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QHLRWKLYFLPWKGPSGRGSPGH*LSSRKK Trigger: CTTCTTTCTAGAGGACAACAAGTGACCAGGGCTGCC...CCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS-3UTR CAA 90 bp | CACCTGCGATGGAAACTTTATTTCCTCCCATGGAAGGGTCCATCTGGGAGGGAGAGCCCTGGTCACTTGTaGTCCTCTAGAAAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: HLRWKLYFLPWKGPSGRESPGHL*SSRKKS Trigger: CGACTTCTTTCTAGAGGACAACAAGTGACCAGGGCT...CTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368718.5 |
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| CDS TCA 72 bp | CCATGCACAGCATGGTCAGGAACACCGAGTACTCCTTaGAGTCGATCTCCTGGTCGCTGTTCTTGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PCTAWSGTPSTP*SRSPGRCSCPG Trigger: GCCTGGACAAGAACAGCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368717.2 ENST00000368718.5 |
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| CDS CAA 90 bp | AGGAACACCGAGTACTCCTTGAAGTCGATCTCCTGGTCGCTGTTCTaGTCCAGGCTCTTCATCAAGTCATCGATGCTGCTCTCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: RNTEYSLKSISWSLF*SRLFIKSSMLLSFI Trigger: GATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368717.2 ENST00000368718.5 |
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| CDS CAA 72 bp | GAGTACTCCTTGAAGTCGATCTCCTGGTCGCTGTTCTaGTCCAGGCTCTTCATCAAGTCATCGATGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: EYSLKSISWSLF*SRLFIKSSMLL Trigger: GAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGATCGACTTCAAGGAGTACTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368717.2 ENST00000368718.5 |
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| CDS GCA 72 bp | TGTTCTTGTCCAGGCTCTTCATCAAGTCATCGATGCTaGTCTCCTTCATCTCCCCAAGACACAGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CSCPGSSSSHRC*SPSSPQDTALS Trigger: AGAAAGAGCTGTGTCTTGGGGAGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368717.2 ENST00000368718.5 |
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