Pregenerated sensors for S100A4 (Homo sapiens)
Ensembl gene IDs: ENSG00000196154Ensembl transcript IDs: ENST00000354332.8, ENST00000368714.1, ENST00000368715.5, ENST00000368716.9, ENST00000468373.1, ENST00000481009.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACCAGAGGGCACGCCATaGCAGCAGTCAGGATCACTG | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEPEGTP*QQSGSL Trigger: CAGTGATCCTGACTGCTGTCATGGCGTGCCCTCTGG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368714.1 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAGGAGGGTGTGCACAGTaGGGAACACATGCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEGGCAQ*GTHALG Trigger: GCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCC...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR TCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACCAGAGGGCACGCCATaGCAGCAGTCAGGATCAACA | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEPEGTP*QQSGST Trigger: TGTTGATCCTGACTGCTGTCATGGCGTGCCCTCTGG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354332.8 |
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| CDS-3UTR TCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACCAGAGGGCACGCCATaGCAGCAGTCAGGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEPEGTP*QQSGSN Trigger: GTTTGATCCTGACTGCTGTCATGGCGTGCCCTCTGG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368716.9 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAATTTTCCCCAAGAAGCTaGGCAGCTCCCGGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEFSPRS*AAPGSA Trigger: TGCTGACCCGGGAGCTGCCCAGCTTCTTGGGGAAAA...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAACAGCAGTCAGGATCTaGCTGGGAGGGTGTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVETAVRI*LGGCAQ Trigger: CTGTGCACACCCTCCCAGCCAGATCCTGACTGCTGT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR TCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCCAGAGGGCACGCCATaGCAGCAGTCAGGATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVPEGTP*QQSGSG Trigger: GCCAGATCCTGACTGCTGTCATGGCGTGCCCTCTGG...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACAGGATCACTGGTGCTaGCGTTTCAGCTGTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEQDHWC*RFSCRS Trigger: GCTCCTACAGCTGAAACGCCAGCACCAGTGATCCTG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368714.1 |
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| CDS-3UTR TCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACATCAAGCACGTGTCTaGAGGAGCCAGGGTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEHQARV*RSQGGK Trigger: TTTTCCACCCTGGCTCCTTCAGACACGTGCTTGATG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR GCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAAGTCAGGATCACTGGTaGTGGCGTTTCAGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVESQDHW*WRFSCR Trigger: CCTACAGCTGAAACGCCAGCACCAGTGATCCTGACT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368714.1 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAAGCAGTCAGGATCACTaGTGCTGGCGTTTCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVESSQDH*CWRFSC Trigger: ACAGCTGAAACGCCAGCACCAGTGATCCTGACTGCT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368714.1 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTCAGTCAGGATCTGGCTaGGAGGGTGTGCACAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARQSGSG*EGVHSG Trigger: CCCACTGTGCACACCCTCCCAGCCAGATCCTGACTG...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACATTTCTTCCTGGGCTaGTTATCTGGGAAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEHFFLG*LSGKPS Trigger: TGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CCA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTTTTTCCCCAAGAAGCTaGGCAGCTCCCGGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQNFQESLLNLLSIKHVSFSPRS*AAPGSA Trigger: TGCTGACCCGGGAGCTGCCCAGCTTCTTGGGGAAAA...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAAAGACACAGTACTCTTaGAAGTCCACCTCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEKTQYS*KSTSLS Trigger: GGACAACGAGGTGGACTTCCAAGAGTACTGTGTCTT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACCTGGGCTGCTTATCTaGGAAGCCTTCAAAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEPGLLI*EAFKEF Trigger: GAATTCTTTGAAGGCTTCCCAGATAAGCAGCCCAGG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTCCGCTGCGCAAGCTCTaGAGATTCGGGCAGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARPLRKL*RFGQQT Trigger: AGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGG...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR TCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCATCAAGCACGTGTCTaGAGGAGCCAGGGTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVHQARV*RSQGGK Trigger: TTTTCCACCCTGGCTCCTTCAGACACGTGCTTGATG...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAATGTTGCTGTCCAAGTTaGTCATCAGCTTCTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVECCCPS*SSASGK Trigger: CTTTCCAGAAGCTGATGAGCAACTTGGACAGCAACA...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGGGCAGTGAACATTTaGAAGATCCGCTGCGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVWAVNI*KIRCAS Trigger: GCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCA...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAATTCGTTACACATCATaGCGATGCAGGACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLLNLLSIKHVSEGARVEIRYTS*RCRTGR Trigger: TCTTCCTGTCCTGCATCGCCATGATGTGTAACGAAT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR TCA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTCATCAAGCACGTGTCTaGAGGAGCCAGGGTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: PQNFQESLLNLLSIKHVSHQARV*RSQGGK Trigger: TTTTCCACCCTGGCTCCTTCAGACACGTGCTTGATG...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGCCTCGTTGTCCCTGTTaGTGTCCAAGTTGCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: QPQNFQESLLNLLSIKHVPRCPC*CPSCSS Trigger: TGATGAGCAACTTGGACAGCAACAGGGACAACGAGG...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR TCA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTACATGCTCTGGGCAGTaGACATTTGCAAGATCCGCT | + |
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Preference number: 4 (lower is better) Translates to: PQNFQESLLNLLSIKHVSTCSGQ*TFARSA Trigger: AGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGT...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCATTTCTTCCTGGGCTaGTTATCTGGGAAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVHFFLG*LSGKPS Trigger: TGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATG...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTATTTGCAAGATCCGCTaGGCAAGCTCTGGAGATTCG | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARICKIR*ASSGDS Trigger: CGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAAT...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCAAGACACAGTACTCTTaGAAGTCCACCTCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVKTQYS*KSTSLS Trigger: GGACAACGAGGTGGACTTCCAAGAGTACTGTGTCTT...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGCCTGGGCTGCTTATCTaGGAAGCCTTCAAAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: QPQNFQESLLNLLSIKHVPGLLI*EAFKEF Trigger: GAATTCTTTGAAGGCTTCCCAGATAAGCAGCCCAGG...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGGGGAACACATGCTCTaGGCAGTGAACATTTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PQNFQESLLNLLSIKHVSGEHML*AVNICK Trigger: CTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCC...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTTATAGCAACAGCGTGTaGAAGCCCACATCTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARYSNSV*KPTSQK Trigger: CTTCTGAGATGTGGGCTTGCACACGCTGTTGCTATA...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354332.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTGTTGCTGTCCAAGTTaGTCATCAGCTTCTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QPQNFQESLLNLLSIKHVCCCPS*SSASGK Trigger: CTTTCCAGAAGCTGATGAGCAACTTGGACAGCAACA...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGTTGCTGTCCAAGTTaGTCATCAGCTTCTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVCCCPS*SSASGK Trigger: CTTTCCAGAAGCTGATGAGCAACTTGGACAGCAACA...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR GCA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTCATTTCTTCCTGGGCTaGTTATCTGGGAAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PQNFQESLLNLLSIKHVSHFFLG*LSGKPS Trigger: TGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATG...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTAAGACACAGTACTCTTaGAAGTCCACCTCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARKTQYS*KSTSLS Trigger: GGACAACGAGGTGGACTTCCAAGAGTACTGTGTCTT...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCATTCGTTACACATCATaGCGATGCAGGACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ASKLPRIFIELAQHQARVIRYTS*RCRTGR Trigger: TCTTCCTGTCCTGCATCGCCATGATGTGTAACGAAT...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTATTCGTTACACATCATaGCGATGCAGGACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SASKLPRIFIELAQHQARIRYTS*RCRTGR Trigger: TCTTCCTGTCCTGCATCGCCATGATGTGTAACGAAT...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR TCA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCAAGAATCTTTATTaGACTTGCTCAGCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: QPQNFQESLLNLLSIKHVSKNLY*TCSASS Trigger: GCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGA...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS CCA 90 bp | ACTCCCATCCCTCCAGGAGCACTTGGCGAGACTCTGCTCCCTCCCTaGGGGAGCCCAGAGCAGTGGGCCCCCGCACCTGGCTGGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TPIPPGALGETLLPP*GSPEQWAPAPGWEG Trigger: ACCCTCCCAGCCAGGTGCGGGGGCCCACTGCTCTGGGCTCCCCCAGGGAGGGAGCAGAGTCTCGCCAAGTGCTCCTGGAGGGATGGGAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CCA 90 bp | TGTGTTCAGAATGCCAGGCTCCACTCCCATCCCTCCAGGAGCACTTaGCGAGACTCTGCTCCCTCCCTGGGGGAGCCCAGAGCAGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: CVQNARLHSHPSRST*RDSAPSLGEPRAVG Trigger: GCCCACTGCTCTGGGCTCCCCCAGGGAGGGAGCAGAGTCTCGCCAAGTGCTCCTGGAGGGATGGGAGTGGAGCCTGGCATTCTGAACACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CCA 90 bp | CCCAGAGCAGTGGGCCCCCGCACCTGGCTGGGAGGGTGTGCACAGTaGGGAACACATGCTCTGGGCAGTGAACATTTGCAAGATCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PRAVGPRTWLGGCAQ*GTHALGSEHLQDPL Trigger: CAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCCCAGCCAGGTGCGGGGGCCCACTGCTCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CCA 90 bp | CATGCTCTGGGCAGTGAACATTTGCAAGATCCGCTGCGCAAGCTCTaGAGATTCGGGCAGCAAACTCCCAGGGCCTCCCAGGCCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: HALGSEHLQDPLRKL*RFGQQTPRASQALP Trigger: AGGCAAGGCCTGGGAGGCCCTGGGAGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CCA 90 bp | CCCGCACCTGGCTGGGAGGGTGTGCACAGTGGGGAACACATGCTCTaGGCAGTGAACATTTGCAAGATCCGCTGCGCAAGCTCTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: PAPGWEGVHSGEHML*AVNICKIRCASSGD Trigger: ATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCCCAGCCAGGTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS TCA 90 bp | CTGGCTGGGAGGGTGTGCACAGTGGGGAACACATGCTCTGGGCAGTaGACATTTGCAAGATCCGCTGCGCAAGCTCTGGAGATTCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LAGRVCTVGNTCSGQ*TFARSAAQALEIRA Trigger: TGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCCCAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS GCA 90 bp | AGTGGGGAACACATGCTCTGGGCAGTGAACATTTGCAAGATCCGCTaGGCAAGCTCTGGAGATTCGGGCAGCAAACTCCCAGGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SGEHMLWAVNICKIR*ASSGDSGSKLPGPP Trigger: GGGAGGCCCTGGGAGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS GCA 90 bp | GAGGGTGTGCACAGTGGGGAACACATGCTCTGGGCAGTGAACATTTaGAAGATCCGCTGCGCAAGCTCTGGAGATTCGGGCAGCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: EGVHSGEHMLWAVNI*KIRCASSGDSGSKL Trigger: GAGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS CCA 90 bp | TCAGGATCTGGCTGGGAGGGTGTGCACAGTGGGGAACACATGCTCTaGGCAGTGAACATTTGCAAGATCCGCTGCGCAAGCTCTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: SGSGWEGVHSGEHML*AVNICKIRCASSGD Trigger: ATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCCCAGCCAGATCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS GCA 90 bp | GCCATGACAGCAGTCAGGATCAACACGTACTATAGCAACAGCGTGTaGAAGCCCACATCTCAGAAGCACCAAACCAAGAAAGAAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: AMTAVRINTYYSNSV*KPTSQKHQTKKEEA Trigger: CGCTTCTTCTTTCTTGGTTTGGTGCTTCTGAGATGTGGGCTTGCACACGCTGTTGCTATAGTACGTGTTGATCCTGACTGCTGTCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354332.8 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAATCTTTGCCCGAGTACTaGTGGAAGGTGGACACCATC | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVESLPEY*WKVDTI Trigger: GATGGTGTCCACCTTCCACAAGTACTCGGGCAAAGA...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAACCTCGTTGTCCCTGTaGCTGTCCAAGTTGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVETSLSL*LSKLLI Trigger: GATGAGCAACTTGGACAGCAACAGGGACAACGAGGT...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAGAAGACACAGTACTCTaGGAAGTCCACCTCGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVEEDTVL*EVHLVV Trigger: GACAACGAGGTGGACTTCCAAGAGTACTGTGTCTTC...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAACTGTTGCTGTCCAAGTaGCTCATCAGCTTCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVELLLSK*LISFWK Trigger: TTTCCAGAAGCTGATGAGCAACTTGGACAGCAACAG...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCTGGGCAGTGAACATTaGCAAGATCCGCTGCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: ASKLPRIFIELAQHQARVLGSEH*QDPLRK Trigger: CTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAG...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | GCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTCTTTGCCCGAGTACTaGTGGAAGGTGGACACCATC | + |
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Preference number: 5 (lower is better) Translates to: ASKLPRIFIELAQHQARVSLPEY*WKVDTI Trigger: GATGGTGTCCACCTTCCACAAGTACTCGGGCAAAGA...GACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAATCTGACTTGTTGAGCTaGAACTTGTCACCCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVESDLLS*NLSPSL Trigger: CAAAGAGGGTGACAAGTTCAAGCTCAACAAGTCAGA...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGACCTCGTTGTCCCTGTaGCTGTCCAAGTTGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: QPQNFQESLLNLLSIKHVTSLSL*LSKLLI Trigger: GATGAGCAACTTGGACAGCAACAGGGACAACGAGGT...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTTCTTTGCCCGAGTACTaGTGGAAGGTGGACACCATC | + |
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Preference number: 5 (lower is better) Translates to: PQNFQESLLNLLSIKHVSSLPEY*WKVDTI Trigger: GATGGTGTCCACCTTCCACAAGTACTCGGGCAAAGA...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTACCTCGTTGTCCCTGTaGCTGTCCAAGTTGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: SASKLPRIFIELAQHQARTSLSL*LSKLLI Trigger: GATGAGCAACTTGGACAGCAACAGGGACAACGAGGT...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAAGAATCTTTATTGAACTaGCTCAGCATCAAGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVEESLLN*LSIKHV Trigger: CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTC...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTGAAGGAGCCAGGGTGGAATCCTTTAGTTCTGACTaGTTGAGCTTGAACTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SLLNLLSIKHVSEGARVESFSSD*LSLNLS Trigger: TGACAAGTTCAAGCTCAACAAGTCAGAACTAAAGGA...TTCCACCCTGGCTCCTTCAGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 |
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| CDS-3UTR CAA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGAAGACACAGTACTCTaGGAAGTCCACCTCGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SASKLPRIFIELAQHQAREDTVL*EVHLVV Trigger: GACAACGAGGTGGACTTCCAAGAGTACTGTGTCTTC...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | CCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCTCTGTTGCTGTCCAAGTaGCTCATCAGCTTCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PQNFQESLLNLLSIKHVSLLLSK*LISFWK Trigger: TTTCCAGAAGCTGATGAGCAACTTGGACAGCAACAG...AGACACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTTCTGACTTGTTGAGCTaGAACTTGTCACCCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SASKLPRIFIELAQHQARSDLLS*NLSPSL Trigger: CAAAGAGGGTGACAAGTTCAAGCTCAACAAGTCAGA...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGGAATCTTTATTGAACTaGCTCAGCATCAAGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: QPQNFQESLLNLLSIKHVESLLN*LSIKHV Trigger: CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTC...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGTCCTTTAGTTCTGACTaGTTGAGCTTGAACTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: QPQNFQESLLNLLSIKHVSFSSD*LSLNLS Trigger: TGACAAGTTCAAGCTCAACAAGTCAGAACTAAAGGA...CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCTCAAAACTTCCAAGAATCTTTATTGAACTTGCTCAGCATCAAGCACGTGAATCTTTATTGAACTaGCTCAGCATCAAGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: SASKLPRIFIELAQHQARESLLN*LSIKHV Trigger: CACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTC...ACGTGCTTGATGCTGAGCAAGTTCAATAAAGATTCTTGGAAGTTTTGAGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354332.8 ENST00000368715.5 |
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| CDS CCA 72 bp | CCTCCAGGAGCACTTGGCGAGACTCTGCTCCCTCCCTaGGGGAGCCCAGAGCAGTGGGCCCCCGCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PPGALGETLLPP*GSPEQWAPAPG Trigger: GCCAGGTGCGGGGGCCCACTGCTCTGGGCTCCCCCAGGGAGGGAGCAGAGTCTCGCCAAGTGCTCCTGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CCA 72 bp | GGCTGGGAGGGTGTGCACAGTGGGGAACACATGCTCTaGGCAGTGAACATTTGCAAGATCCGCTGCGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GWEGVHSGEHML*AVNICKIRCAS Trigger: GCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS CCA 72 bp | GGCAGTGAACATTTGCAAGATCCGCTGCGCAAGCTCTaGAGATTCGGGCAGCAAACTCCCAGGGCCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSEHLQDPLRKL*RFGQQTPRASQ Trigger: CTGGGAGGCCCTGGGAGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481009.1 |
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| CDS CAA 90 bp | GGAGGGTGTGCACAGTGGGGAACACATGCTCTGGGCAGTGAACATTaGCAAGATCCGCTGCGCAAGCTCTGGAGATTCGGGCAGCAAACT | + |
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Preference number: 6 (lower is better) Translates to: GGCAQWGTHALGSEH*QDPLRKLWRFGQQT Trigger: AGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS TCA 72 bp | AGGGTGTGCACAGTGGGGAACACATGCTCTGGGCAGTaGACATTTGCAAGATCCGCTGCGCAAGCTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVCTVGNTCSGQ*TFARSAAQALE Trigger: CTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTGTTCCCCACTGTGCACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS GCA 72 bp | CACATGCTCTGGGCAGTGAACATTTGCAAGATCCGCTaGGCAAGCTCTGGAGATTCGGGCAGCAAACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HMLWAVNICKIR*ASSGDSGSKLP Trigger: TGGGAGTTTGCTGCCCGAATCTCCAGAGCTTGCGCAGCGGATCTTGCAAATGTTCACTGCCCAGAGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368715.5 ENST00000481009.1 |
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| CDS GCA 72 bp | GCAGTCAGGATCAACACGTACTATAGCAACAGCGTGTaGAAGCCCACATCTCAGAAGCACCAAACCAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: AVRINTYYSNSV*KPTSQKHQTKK Trigger: TTTCTTGGTTTGGTGCTTCTGAGATGTGGGCTTGCACACGCTGTTGCTATAGTACGTGTTGATCCTGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354332.8 |
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| CDS CCA 72 bp | TATCTGGGAAGCCTTCAAAGAATTCGTTACACATCATaGCGATGCAGGACAGGAAGACACAGTACTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: YLGSLQRIRYTS*RCRTGRHSTLG Trigger: TCCAAGAGTACTGTGTCTTCCTGTCCTGCATCGCCATGATGTGTAACGAATTCTTTGAAGGCTTCCCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 ENST00000468373.1 ENST00000481009.1 |
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| CDS GCA 72 bp | CAACCACATCAGAGGAGTTTTCATTTCTTCCTGGGCTaGTTATCTGGGAAGCCTTCAAAGAATTCGTTACAC | + |
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Preference number: 6 (lower is better) Translates to: QPHQRSFHFFLG*LSGKPSKNSLH Trigger: GTGTAACGAATTCTTTGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATGAAAACTCCTCTGATGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000354332.8 ENST00000368714.1 ENST00000368715.5 ENST00000368716.9 ENST00000468373.1 ENST00000481009.1 |
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