RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for S100A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196754

Ensembl transcript IDs: ENST00000368707.5, ENST00000368708.9, ENST00000487430.7, ENST00000497140.5

Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACAGTCCTGGGCCCAAGAGATCCATGGCAGGAAGTCAAGAGTTCTaGTTCAGGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACA +
Preference number: 1 (lower is better)
Translates to: NSPGPKRSMAGSQEF*FRVGLGSPGRSHCT
Trigger: TGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCTTGGGCCCAGGACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTaGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGC +
Preference number: 1 (lower is better)
Translates to: RDPWQEVKSSASGSV*AALEEVIAHDSDEC
Trigger: GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR-3UTR TCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCATCCCAGCACTCCAGCTaGGCCAGCCGGGTTATGGAA +
Preference number: 2 (lower is better)
Translates to: HSSGLGEISRRVRAQKGASQHSS*ASRVME
Trigger: TTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGA...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
3UTR-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCAGGCATCAACAGTCCTaGGCCCAAGAGATCCATGGC +
Preference number: 2 (lower is better)
Translates to: RDPWQEVKSSASGSVWAARHQQS*AQEIHG
Trigger: GCCATGGATCTCTTGGGCCCAGGACTGTTGATGCCT...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCTGGAAGTCCACCTGCTaGTCACTGTTCTCATCCAGG +
Preference number: 2 (lower is better)
Translates to: RDPWQEVKSSASGSVWAAWKSTC*SLFSSR
Trigger: CCTGGATGAGAACAGTGACCAGCAGGTGGACTTCCA...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR-3UTR CCA 90 bp GGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGCGGCCCAAGAGATCCATaGCAGGAAGTCAAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: GSVWAALEEVIAHDSDECGPRDP*QEVKSS
Trigger: AGAACTCTTGACTTCCTGCCATGGATCTCTTGGGCC...GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR-3UTR CCA 90 bp GAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCAAAACAGCATACTCCTaGAAGTCCACCTGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: EIHGRKSRVLLQGRSGQPKTAYS*KSTCWS
Trigger: TGACCAGCAGGTGGACTTCCAGGAGTATGCTGTTTT...GGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR-3UTR CCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAGGCCCAAGAGATCCATaGCAGGAAGTCAAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAGPRDP*QEVKSS
Trigger: AGAACTCTTGACTTCCTGCCATGGATCTCTTGGGCC...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
3UTR-3UTR CCA 90 bp CCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAAAGGCATCAACAGTCCTaGGCCCAAGAGATCCATGGC +
Preference number: 2 (lower is better)
Translates to: PSTPAEPAGLWNITEQLKRHQQS*AQEIHG
Trigger: GCCATGGATCTCTTGGGCCCAGGACTGTTGATGCCT...TTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368708.9
3UTR CCA 72 bp TCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTaGAAGAAGTCATTGCACATGACAGTGATGAGTGCC +
Preference number: 3 (lower is better)
Translates to: SRVLLQGRSGQP*KKSLHMTVMSA
Trigger: GGCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
3UTR CCA 72 bp TGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTaGGCAGCCCTGGAAGAAGTCATTGCACATGACAGT +
Preference number: 3 (lower is better)
Translates to: WQEVKSSASGSV*AALEEVIAHDS
Trigger: ACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAGCTCCACCACCAGCTaGGGGAGGGCTCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLSSTTS*GRALGQ
Trigger: CTGGCCTAGAGCCCTCCCCCAGCTGGTGGTGGAGCT...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR TCA 90 bp AGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTCCCCCTTACTCAGCTTaGACTTGTCGCCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSMAGSQEFCFRVGLGSPPPYSA*TCRPLG
Trigger: GCCAAGAGGGCGACAAGTTCAAGCTGAGTAAGGGGG...AGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCGGCCCTCACAGCACATaGTTCTCTGGAATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAAGPHST*FSGMPH
Trigger: GTGGGGCATTCCAGAGAACCATGTGCTGTGAGGGCC...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp CCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAAAGGTGTCGTGGGGACTaGGCATCCTGGACCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSTPAEPAGLWNITEQLKRCRGD*ASWTGV
Trigger: CACCCCGGTCCAGGATGCCCAGTCCCCACGACACCT...TTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAAAGTGGGAGGTGTCGTaGGGACTGGGCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAKWEVS*GLGILD
Trigger: GTCCAGGATGCCCAGTCCCCACGACACCTCCCACTT...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR TCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAAAACCTGCCTCAACCTaGTCCCACCAAACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAKPAST*SHQTLA
Trigger: GGCCAGGGTTTGGTGGGATCAGGTTGAGGCAGGTTT...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR GCA 90 bp CCAAGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAAGCACAGCCAGCGCCTaGTCCAGAGAACTGCACATC +
Preference number: 4 (lower is better)
Translates to: PRDPWQEVKSSASGSVWASTASA*SRELHI
Trigger: GATGTGCAGTTCTCTGGAGCAGGCGCTGGCTGTGCT...TGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCGGTCTGGGCAGCCCTaGAAGAAGTCATTGCACATG +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAARSGQP*KKSLHM
Trigger: CATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCG...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR GCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAGCACAGCCAGCGCCTaGTCCAGAGAACTGCACATC +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLSTASA*SRELHI
Trigger: GATGTGCAGTTCTCTGGAGCAGGCGCTGGCTGTGCT...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR GCA 90 bp TCAGGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGGGAAGTCAAGAGTTCTaGTTCAGGGTCGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSVWAALEEVIAHDSDEGSQEF*FRVGLG
Trigger: GCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCC...CTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR GCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAGGAAGTCAAGAGTTCTaGTTCAGGGTCGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAGSQEF*FRVGLG
Trigger: GCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCC...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCACATCATGGATCTGTaGCAGACCAGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAAHIMDL*QTRWQR
Trigger: TCTCTGCCACCTGGTCTGCCACAGATCCATGATGTG...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCAATGCCCCACAAAGCTaGGCAGCTCCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAANAPQS*AAPCAE
Trigger: TTCTGCACAAGGAGCTGCCCAGCTTTGTGGGGCATT...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp GGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGCCAGCACATGGTTCTCTaGAATGCCCCACAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSVWAALEEVIAHDSDECQHMVL*NAPQSW
Trigger: CCAGCTTTGTGGGGCATTCCAGAGAACCATGTGCTG...GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp CCAAGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAAGGCATCAACAGTCCTaGGCCCAAGAGATCCATGGC +
Preference number: 4 (lower is better)
Translates to: PRDPWQEVKSSASGSVWARHQQS*AQEIHG
Trigger: GCCATGGATCTCTTGGGCCCAGGACTGTTGATGCCT...TGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAGTGAGGATTTATATGTaGGCCCCACTGGCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAVRIYM*APLAPN
Trigger: GTTGGGGGCCAGTGGGGCCCACATATAAATCCTCAC...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR TCA 90 bp CCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAACCCCCTTACTCAGCTTaGACTTGTCGCCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PSTPAEPAGLWNITEQLKPPYSA*TCRPLG
Trigger: GCCAAGAGGGCGACAAGTTCAAGCTGAGTAAGGGGG...TTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCACACATCATGGATCTGTaGCAGACCAGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAHIMDL*QTRWQR
Trigger: TCTCTGCCACCTGGTCTGCCACAGATCCATGATGTG...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp AGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTTGGCAGGAGTACTTGTaGAAGGTAGTGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: RSMAGSQEFCFRVGLGSPWQEYL*KVVTST
Trigger: TGTGCTGGTCACTACCTTCCACAAGTACTCCTGCCA...AGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCATGGAAGTCCACCTGCTaGTCACTGTTCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSGLGEISRRVRAQKGAWKSTC*SLFSSR
Trigger: CCTGGATGAGAACAGTGACCAGCAGGTGGACTTCCA...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCGGCCCAAGAGATCCATaGCAGGAAGTCAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAAGPRDP*QEVKSS
Trigger: AGAACTCTTGACTTCCTGCCATGGATCTCTTGGGCC...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR GCA 90 bp CCAAGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCACTGGGCAGCTCCTTGTaGAGAAGTTCCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PRDPWQEVKSSASGSVWALGSSL*RSSFIS
Trigger: GGAAATGAAGGAACTTCTGCACAAGGAGCTGCCCAG...TGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp GGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGCTTCCCTTCTGGGCTCTaGTTTCTCAAGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: GSVWAALEEVIAHDSDECFPSGL*FLKSPM
Trigger: CATTGGAGACTTGAGAAACCAGAGCCCAGAAGGGAA...GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAATATGTGGGCCCCACTaGCCCCCAACTTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLICGPH*PPTWHF
Trigger: AAAATGCCAAGTTGGGGGCCAGTGGGGCCCACATAT...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR TCA 90 bp AGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTTTCTCCAGTGCTGTGTaGTCTTGGGACAATCACTTT +
Preference number: 4 (lower is better)
Translates to: RSMAGSQEFCFRVGLGSPFSSAV*SWDNHF
Trigger: AAAGTGATTGTCCCAAGATCACACAGCACTGGAGAA...AGGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR GCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTACTGGGCAGCTCCTTGTaGAGAAGTTCCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLLGSSL*RSSFIS
Trigger: GGAAATGAAGGAACTTCTGCACAAGGAGCTGCCCAG...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR GCA 90 bp GGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGCATCCACTTTCTCCAGTaGTGTGTGATCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: GSVWAALEEVIAHDSDECIHFLQ*CVILGQ
Trigger: TTGTCCCAAGATCACACAGCACTGGAGAAAGTGGAT...GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTATGGCAGGAGTACTTGTaGAAGGTAGTGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLWQEYL*KVVTST
Trigger: TGTGCTGGTCACTACCTTCCACAAGTACTCCTGCCA...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp AGAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCATCACTTTTCCCTTCTaGGCTCTGGTTTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: RDPWQEVKSSASGSVWAAITFPF*ALVSQV
Trigger: GACTTGAGAAACCAGAGCCCAGAAGGGAAAAGTGAT...GGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp TCAGGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGAAAACAGCATACTCCTaGAAGTCCACCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SGSVWAALEEVIAHDSDEKTAYS*KSTCWS
Trigger: TGACCAGCAGGTGGACTTCCAGGAGTATGCTGTTTT...CTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAGGCCCAAGAGATCCATaGCAGGAAGTCAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLGPRDP*QEVKSS
Trigger: AGAACTCTTGACTTCCTGCCATGGATCTCTTGGGCC...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAAACAGCATACTCCTaGAAGTCCACCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLKTAYS*KSTCWS
Trigger: TGACCAGCAGGTGGACTTCCAGGAGTATGCTGTTTT...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAGAGCCAGCCGGGTTATaGAACATCACTGAGCAATTA +
Preference number: 4 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLEPAGL*NITEQL
Trigger: TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTC...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp GCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAATATTATCAACAGCGGTCTGGGCAGCCCTaGAAGAAGTCATTGCACATG +
Preference number: 4 (lower is better)
Translates to: AEPAGLWNITEQLKYYQQRSGQP*KKSLHM
Trigger: CATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCG...CTGTTGATAATATTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp GCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAATATTATCAACAGAGGCATCAACAGTCCTaGGCCCAAGAGATCCATGGC +
Preference number: 4 (lower is better)
Translates to: AEPAGLWNITEQLKYYQQRHQQS*AQEIHG
Trigger: GCCATGGATCTCTTGGGCCCAGGACTGTTGATGCCT...CTGTTGATAATATTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp GCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAATATTATCAACAGTCTCCCCCACAAAGCTaGGCAGCTCCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AEPAGLWNITEQLKYYQQSPPQS*AAPCAE
Trigger: TTCTGCACAAGGAGCTGCCCAGCTTTGTGGGGGAGA...CTGTTGATAATATTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CCA 90 bp GCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAATATTATCAACAGGATCCCACCAAACCCTaGCCTCTTGCCATTCCCACT +
Preference number: 4 (lower is better)
Translates to: AEPAGLWNITEQLKYYQQDPTKP*PLAIPT
Trigger: AGTGGGAATGGCAAGAGGCCAGGGTTTGGTGGGATC...CTGTTGATAATATTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR GCA 90 bp GCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAATATTATCAACAGCAAACCCTGGCCTCTTaGCATTCCCACTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: AEPAGLWNITEQLKYYQQQTLAS*HSHSFP
Trigger: AGGGAATGAGTGGGAATGGCAAGAGGCCAGGGTTTG...CTGTTGATAATATTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS TCA 90 bp AGACTGTGGTTCCCTGAGGCCGGAGGCGATACCTCCATCTCACCCTaGGGGCAGACGCTAAAGCTTCCCTTGTGTCTGGGAGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: RLWFPEAGGDTSISP*GQTLKLPLCLGVTK
Trigger: CTTGGTGACTCCCAGACACAAGGGAAGCTTTAGCGTCTGCCCTCAGGGTGAGATGGAGGTATCGCCTCCGGCCTCAGGGAACCACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487430.7
CDS-3UTR CAA 90 bp GAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTCCCCCTTACTCAGCTaGAACTTGTCGCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: EIHGRKSRVLLQGRSGQPSPLLS*NLSPSW
Trigger: CCAAGAGGGCGACAAGTTCAAGCTGAGTAAGGGGGA...GGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CAA 90 bp GAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCTTACTCAGCTTGAACTaGTCGCCCTCTTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: EIHGRKSRVLLQGRSGQPLLSLN*SPSWQE
Trigger: CTCCTGCCAAGAGGGCGACAAGTTCAAGCTGAGTAA...GGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CAA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCATCCCCCTTACTCAGCTaGAACTTGTCGCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: HSSGLGEISRRVRAQKGASPLLS*NLSPSW
Trigger: CCAAGAGGGCGACAAGTTCAAGCTGAGTAAGGGGGA...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CAA 90 bp GAGATCCATGGCAGGAAGTCAAGAGTTCTGCTTCAGGGTCGGTCTGGGCAGCCCAAGCTGGGCAGCTCCTaGTGCAGAAGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: EIHGRKSRVLLQGRSGQPKLGSS*CRSSFI
Trigger: AATGAAGGAACTTCTGCACAAGGAGCTGCCCAGCTT...GGGCTGCCCAGACCGACCCTGAAGCAGAACTCTTGACTTCCTGCCATGGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CAA 90 bp TCTCCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTACCAAACCCTGGCCTCTaGCCATTCCCACTCATTCCC +
Preference number: 5 (lower is better)
Translates to: SPSTPAEPAGLWNITEQLPNPGL*PFPLIP
Trigger: GGGAATGAGTGGGAATGGCAAGAGGCCAGGGTTTGG...TAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CAA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCATTACTCAGCTTGAACTaGTCGCCCTCTTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: HSSGLGEISRRVRAQKGALLSLN*SPSWQE
Trigger: CTCCTGCCAAGAGGGCGACAAGTTCAAGCTGAGTAA...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS-3UTR CAA 90 bp CATAGCTCTGGCCTTGGAGAGATTTCCAGGAGAGTCAGAGCCCAGAAGGGAGCAAGCATAGCTCTGGCCTaGGAGAGATTTCCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: HSSGLGEISRRVRAQKGASIALA*ERFPGE
Trigger: CTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATGCT...TGCTCCCTTCTGGGCTCTGACTCTCCTGGAAATCTCTCCAAGGCCAGAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS TCA 90 bp TGGCCCCCAACTTGGCATTTTAAGGAAACCAAACCTGCCTCAACCTaGTCCCACCAAACCCTGGCCTCTTGCCATTCCCACTCATTCCCT +
Preference number: 5 (lower is better)
Translates to: WPPTWHFKETKPAST*SHQTLASCHSHSFP
Trigger: AGGGAATGAGTGGGAATGGCAAGAGGCCAGGGTTTGGTGGGATCAGGTTGAGGCAGGTTTGGTTTCCTTAAAATGCCAAGTTGGGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368708.9
ENST00000497140.5
CDS-3UTR CAA 90 bp GGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGTGCCAGTGCTGTGTGATCTaGGGACAATCACTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GSVWAALEEVIAHDSDECQCCVI*GQSLFP
Trigger: AGGGAAAAGTGATTGTCCCAAGATCACACAGCACTG...GCACTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS CCA 90 bp TCTGGGCTCTGGTTTCTCAAGTCTCCAATGACAGGATTAAACAGATaGACTCGGAAGGCCCTCACAGCACATGGTTCTCTGGAATGCCCC +
Preference number: 5 (lower is better)
Translates to: SGLWFLKSPMTGLNR*TRKALTAHGSLECP
Trigger: GGGGCATTCCAGAGAACCATGTGCTGTGAGGGCCTTCCGAGTCCATCTGTTTAATCCTGTCATTGGAGACTTGAGAAACCAGAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CAA 90 bp TCAGGGTCGGTCTGGGCAGCCCTGGAAGAAGTCATTGCACATGACAGTGATGAGCCCTGGAAGAAGTCATaGCACATGACAGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: SGSVWAALEEVIAHDSDEPWKKS*HMTVMS
Trigger: ACTCATCACTGTCATGTGCAATGACTTCTTCCAGGG...CTCATCACTGTCATGTGCAATGACTTCTTCCAGGGCTGCCCAGACCGACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS-3UTR CAA 90 bp CCCAGCACTCCAGCTGAGCCAGCCGGGTTATGGAACATCACTGAGCAATTAAAACCCTGGAAGAAGTCATaGCACATGACAGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: PSTPAEPAGLWNITEQLKPWKKS*HMTVMS
Trigger: ACTCATCACTGTCATGTGCAATGACTTCTTCCAGGG...TTTTAATTGCTCAGTGATGTTCCATAACCCGGCTGGCTCAGCTGGAGTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368708.9
CDS CCA 90 bp CAGTGCTGTGTGATCTTGGGACAATCACTTTTCCCTTCTGGGCTCTaGTTTCTCAAGTCTCCAATGACAGGATTAAACAGATGGACTCGG +
Preference number: 5 (lower is better)
Translates to: QCCVILGQSLFPSGL*FLKSPMTGLNRWTR
Trigger: CCGAGTCCATCTGTTTAATCCTGTCATTGGAGACTTGAGAAACCAGAGCCCAGAAGGGAAAAGTGATTGTCCCAAGATCACACAGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS CCA 90 bp CTTTCTCCAGTGCTGTGTGATCTTGGGACAATCACTTTTCCCTTCTaGGCTCTGGTTTCTCAAGTCTCCAATGACAGGATTAAACAGATG +
Preference number: 5 (lower is better)
Translates to: LSPVLCDLGTITFPF*ALVSQVSNDRIKQM
Trigger: CATCTGTTTAATCCTGTCATTGGAGACTTGAGAAACCAGAGCCCAGAAGGGAAAAGTGATTGTCCCAAGATCACACAGCACTGGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS TCA 72 bp TTCCCTGAGGCCGGAGGCGATACCTCCATCTCACCCTaGGGGCAGACGCTAAAGCTTCCCTTGTGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: FPEAGGDTSISP*GQTLKLPLCLG
Trigger: TCCCAGACACAAGGGAAGCTTTAGCGTCTGCCCTCAGGGTGAGATGGAGGTATCGCCTCCGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487430.7
CDS CCA 72 bp ATTAAACAGATGGACTCGGAAGGCCCTCACAGCACATaGTTCTCTGGAATGCCCCACAAAGCTGGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: IKQMDSEGPHST*FSGMPHKAGQL
Trigger: GAGCTGCCCAGCTTTGTGGGGCATTCCAGAGAACCATGTGCTGTGAGGGCCTTCCGAGTCCATCTGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS TCA 72 bp TTCAGCCCCTCCTCATCCACTTTCTCCAGTGCTGTGTaGTCTTGGGACAATCACTTTTCCCTTCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: FSPSSSTFSSAV*SWDNHFSLLGS
Trigger: AGAGCCCAGAAGGGAAAAGTGATTGTCCCAAGATCACACAGCACTGGAGAAAGTGGATGAGGAGGGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS CCA 72 bp TGGTTTCTCAAGTCTCCAATGACAGGATTAAACAGATaGACTCGGAAGGCCCTCACAGCACATGGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: WFLKSPMTGLNR*TRKALTAHGSL
Trigger: CAGAGAACCATGTGCTGTGAGGGCCTTCCGAGTCCATCTGTTTAATCCTGTCATTGGAGACTTGAGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368707.5
CDS CCA 72 bp GTGATCTTGGGACAATCACTTTTCCCTTCTGGGCTCTaGTTTCTCAAGTCTCCAATGACAGGATTAAACAGA +
Preference number: 6 (lower is better)
Translates to: VILGQSLFPSGL*FLKSPMTGLNR
Trigger: TCTGTTTAATCCTGTCATTGGAGACTTGAGAAACCAGAGCCCAGAAGGGAAAAGTGATTGTCCCAAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368707.5